ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart43e03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 333 bits (168), Expect = 3e-88 Identities = 297/340 (87%) Strand = Plus / Plus Query: 166 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 225 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 98143 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 98202 Query: 226 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 285 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 98203 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 98262 Query: 286 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 345 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 98263 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 98322 Query: 346 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 405 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 98323 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 98382 Query: 406 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 465 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 98383 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 98442 Query: 466 ccctccgtctcctccacgagatcgacgtcagcaacaacca 505 ||||| | |||||||||||||||||||||||||||||| Sbjct: 98443 acctccaccgcctccacgagatcgacgtcagcaacaacca 98482
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 333 bits (168), Expect = 3e-88 Identities = 297/340 (87%) Strand = Plus / Minus Query: 166 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 225 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 32781398 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 32781339 Query: 226 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 285 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 32781338 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 32781279 Query: 286 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 345 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 32781278 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 32781219 Query: 346 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 405 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 32781218 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 32781159 Query: 406 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 465 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 32781158 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 32781099 Query: 466 ccctccgtctcctccacgagatcgacgtcagcaacaacca 505 ||||| | |||||||||||||||||||||||||||||| Sbjct: 32781098 acctccaccgcctccacgagatcgacgtcagcaacaacca 32781059 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 24290060 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 24290001 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 24290000 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 24289941 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 24289940 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 24289881 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 24289880 acatcgccgg 24289871
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 333 bits (168), Expect = 3e-88 Identities = 297/340 (87%) Strand = Plus / Minus Query: 166 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 225 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 32871908 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 32871849 Query: 226 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 285 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 32871848 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 32871789 Query: 286 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 345 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 32871788 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 32871729 Query: 346 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 405 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 32871728 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 32871669 Query: 406 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 465 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 32871668 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 32871609 Query: 466 ccctccgtctcctccacgagatcgacgtcagcaacaacca 505 ||||| | |||||||||||||||||||||||||||||| Sbjct: 32871608 acctccaccgcctccacgagatcgacgtcagcaacaacca 32871569 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 24207529 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 24207470 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 24207469 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 24207410 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 24207409 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 24207350 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 24207349 acatcgccgg 24207340
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 333 bits (168), Expect = 3e-88 Identities = 297/340 (87%) Strand = Plus / Plus Query: 166 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 225 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 231 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 290 Query: 226 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 285 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 291 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 350 Query: 286 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 345 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 351 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 410 Query: 346 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 405 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 411 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 470 Query: 406 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 465 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 471 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 530 Query: 466 ccctccgtctcctccacgagatcgacgtcagcaacaacca 505 ||||| | |||||||||||||||||||||||||||||| Sbjct: 531 acctccaccgcctccacgagatcgacgtcagcaacaacca 570
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 186 bits (94), Expect = 5e-44 Identities = 256/310 (82%) Strand = Plus / Plus Query: 195 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 254 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 194 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 253 Query: 255 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 314 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 254 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 313 Query: 315 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 374 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 314 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 373 Query: 375 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 434 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 374 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 433 Query: 435 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 494 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 434 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 493 Query: 495 agcaacaacc 504 |||||||||| Sbjct: 494 agcaacaacc 503 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 tcgacgtcagcaacaaccagct 508 |||||||||||||||||||||| Sbjct: 843 tcgacgtcagcaacaaccagct 864
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 186 bits (94), Expect = 5e-44 Identities = 256/310 (82%) Strand = Plus / Minus Query: 195 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 254 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 4062812 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 4062753 Query: 255 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 314 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 4062752 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 4062693 Query: 315 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 374 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 4062692 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 4062633 Query: 375 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 434 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 4062632 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 4062573 Query: 435 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 494 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 4062572 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 4062513 Query: 495 agcaacaacc 504 |||||||||| Sbjct: 4062512 agcaacaacc 4062503 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 tcgacgtcagcaacaaccagct 508 |||||||||||||||||||||| Sbjct: 4062163 tcgacgtcagcaacaaccagct 4062142 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ggcggtggtggcgtcgccgct 127 ||||||||||||||||||||| Sbjct: 8742147 ggcggtggtggcgtcgccgct 8742127
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 186 bits (94), Expect = 5e-44 Identities = 256/310 (82%) Strand = Plus / Minus Query: 195 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 254 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 55670 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 55611 Query: 255 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 314 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 55610 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 55551 Query: 315 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 374 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 55550 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 55491 Query: 375 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 434 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 55490 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 55431 Query: 435 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 494 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 55430 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 55371 Query: 495 agcaacaacc 504 |||||||||| Sbjct: 55370 agcaacaacc 55361 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 tcgacgtcagcaacaaccagct 508 |||||||||||||||||||||| Sbjct: 55021 tcgacgtcagcaacaaccagct 55000
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 186 bits (94), Expect = 5e-44 Identities = 256/310 (82%) Strand = Plus / Plus Query: 195 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 254 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 194 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 253 Query: 255 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 314 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 254 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 313 Query: 315 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 374 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 314 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 373 Query: 375 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 434 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 374 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 433 Query: 435 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 494 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 434 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 493 Query: 495 agcaacaacc 504 |||||||||| Sbjct: 494 agcaacaacc 503 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 tcgacgtcagcaacaaccagct 508 |||||||||||||||||||||| Sbjct: 843 tcgacgtcagcaacaaccagct 864
>gb|AY106034.1| Zea mays PCO099903 mRNA sequence Length = 687 Score = 131 bits (66), Expect = 2e-27 Identities = 113/126 (89%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 386 gctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg-ttctgcgg-c 443 ||||||||| || ||||||||||||||||||||||||||||||||| | ||| |||| | Sbjct: 8 gctgggcctcctgtccgacctcgccgtcttccacctcaactccaaccgccttcagcgggc 67 Query: 444 gcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaac 503 | ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68 tccctccccgactcgctccgctccctccacctcctccacgagatcgacgtcagcaacaac 127 Query: 504 cagctc 509 |||||| Sbjct: 128 cagctc 133
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 123 bits (62), Expect = 6e-25 Identities = 146/174 (83%) Strand = Plus / Plus Query: 331 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 390 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 392 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 451 Query: 391 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 450 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 452 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 511 Query: 451 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 512 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 123 bits (62), Expect = 6e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 331 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 390 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 4180022 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 4179963 Query: 391 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 450 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 4179962 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 4179903 Query: 451 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 4179902 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 4179849 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 23281764 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 23281823 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 23281824 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 23281877 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 390 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 14422072 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 14422018 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtgg 114 ||||||||||||||||||||||||||| Sbjct: 7437123 cggcggcgttcctggcgctggcggtgg 7437149 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 89 ggcggcgttcctggcgctggcggtggtgg 117 |||||||||||||||||||||| |||||| Sbjct: 6768939 ggcggcgttcctggcgctggcgctggtgg 6768911 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 23281906 ctcctccacgagctcgacctcagcaacaacc 23281936 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 acgagatcgacgtcagcaacaacc 504 ||||| |||||||||||||||||| Sbjct: 14421981 acgagctcgacgtcagcaacaacc 14421958 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cggcggcgttcctggcgctggcgg 111 |||||||| ||||||||||||||| Sbjct: 9429616 cggcggcgctcctggcgctggcgg 9429593
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 123 bits (62), Expect = 6e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 331 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 390 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 17989 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 17930 Query: 391 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 450 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 17929 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 17870 Query: 451 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 17869 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 17816
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 123 bits (62), Expect = 6e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 331 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 390 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 126993 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 126934 Query: 391 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 450 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 126933 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 126874 Query: 451 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 126873 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 126820
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 123 bits (62), Expect = 6e-25 Identities = 146/174 (83%) Strand = Plus / Plus Query: 331 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 390 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 392 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 451 Query: 391 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 450 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 452 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 511 Query: 451 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 512 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 241 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 300 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 301 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 360 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 361 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 420 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 421 acatcgccgg 430
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 90564 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 90623 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 90624 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 90683 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 90684 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 90743 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 90744 acatcgccgg 90753
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full insert sequence Length = 1511 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 275 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 334 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 335 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 394 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 395 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 454 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 455 acatcgccgg 464
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full insert sequence Length = 1642 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 275 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 334 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 335 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 394 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 395 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 454 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 455 acatcgccgg 464
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full insert sequence Length = 1451 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 181 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 240 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 271 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 330 Query: 241 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 300 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 331 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 390 Query: 301 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 360 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 391 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 450 Query: 361 acatcgccgg 370 |||||||||| Sbjct: 451 acatcgccgg 460
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full insert sequence Length = 1122 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 274 tgtgcagctaccacggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccg 333 |||||| |||| |||||||||||||||| ||||||||||||| || || | ||||| Sbjct: 1 tgtgcaactacaccggcgtctactgcgcggcggcgcccgacgatccgcacgtcctcaccg 60 Query: 334 tcgcctccgtcgacctcaaccacggcgacatcgccgg 370 ||||| |||||||||||||||||||||||||||||| Sbjct: 61 tcgccggcgtcgacctcaaccacggcgacatcgccgg 97
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 357 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 416 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 417 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 470 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 499 ctcctccacgagctcgacctcagcaacaacc 529
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 7462 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 7521 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 7522 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 7575 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 7604 ctcctccacgagctcgacctcagcaacaacc 7634
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 68506 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 68565 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 68566 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 68619 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 68648 ctcctccacgagctcgacctcagcaacaacc 68678
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 416 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 475 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 476 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 529 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 558 ctcctccacgagctcgacctcagcaacaacc 588
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 391 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 415 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 474 Query: 392 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 445 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 475 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 528 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 557 ctcctccacgagctcgacctcagcaacaacc 587
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 345 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 404 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 310 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 369 Query: 405 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 464 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 370 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 429 Query: 465 tccctccgtctcctccacgagatcgacgtcagcaacaacc 504 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 430 cgcctccgccgcctccacgagctcgacctcagcaacaacc 469
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 345 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 404 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 125206 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 125147 Query: 405 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 464 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 125146 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 125087 Query: 465 tccctccgtctcctccacgagatcgacgtcagcaacaacc 504 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 125086 cgcctccgccgcctccacgagctcgacctcagcaacaacc 125047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 345 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 404 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 4757201 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 4757142 Query: 405 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 464 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 4757141 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 4757082 Query: 465 tccctccgtctcctccacgagatcgacgtcagcaacaacc 504 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 4757081 cgcctccgccgcctccacgagctcgacctcagcaacaacc 4757042 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 27110507 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 27110550 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 24438180 cgctgctgctcgcggcggcg 24438199 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gggcgccgccggcgaccaac 173 |||||||||||||||||||| Sbjct: 10067259 gggcgccgccggcgaccaac 10067240 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tacgtggcgctgcaggcgctgaag 218 |||| ||||||||||||||||||| Sbjct: 5390601 tacgaggcgctgcaggcgctgaag 5390624
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 345 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 404 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 29609 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 29550 Query: 405 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 464 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 29549 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 29490 Query: 465 tccctccgtctcctccacgagatcgacgtcagcaacaacc 504 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 29489 cgcctccgccgcctccacgagctcgacctcagcaacaacc 29450
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 395 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 454 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 390 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 449 Query: 455 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 450 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 499 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 gacctcaaccacggcgacatcgccgg 370 ||||||||||||| |||||||||||| Sbjct: 337 gacctcaaccacgccgacatcgccgg 362 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 ctaccacggcgtctactgcgcgacggcgcccg 312 |||| ||||||||||||||||| || |||||| Sbjct: 261 ctacaacggcgtctactgcgcgccgtcgcccg 292
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 395 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 454 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 2022916 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 2022857 Query: 455 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 2022856 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 2022807 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 gacctcaaccacggcgacatcgccgg 370 ||||||||||||| |||||||||||| Sbjct: 2022969 gacctcaaccacgccgacatcgccgg 2022944 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 281 ctaccacggcgtctactgcgcgacggcgcccg 312 |||| ||||||||||||||||| || |||||| Sbjct: 2023045 ctacaacggcgtctactgcgcgccgtcgcccg 2023014
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 395 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 454 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 73124 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 73065 Query: 455 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 504 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 73064 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 73015 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 gacctcaaccacggcgacatcgccgg 370 ||||||||||||| |||||||||||| Sbjct: 73177 gacctcaaccacgccgacatcgccgg 73152 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 281 ctaccacggcgtctactgcgcgacggcgcccg 312 |||| ||||||||||||||||| || |||||| Sbjct: 73253 ctacaacggcgtctactgcgcgccgtcgcccg 73222
>emb|Z34465.1|ZMEXTENS Z.mays (B73) gene for extensin-like protein Length = 4431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 383 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 442 |||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 898 ggagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 957 Query: 443 c 443 | Sbjct: 958 c 958 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 480 cacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||||||||| Sbjct: 995 cacgagttcgacgtcagcaacaacc 1019
>gb|AY109630.1| Zea mays CL844_2 mRNA sequence Length = 3567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 383 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 442 |||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 435 ggagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 494 Query: 443 c 443 | Sbjct: 495 c 495 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 480 cacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||||||||| Sbjct: 532 cacgagttcgacgtcagcaacaacc 556
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 384 gagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggc 443 ||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | ||||||||| Sbjct: 436 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcggc 495
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 384 gagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggc 443 ||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | ||||||||| Sbjct: 845 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcggc 904
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 390 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 403 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 457 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 acgagatcgacgtcagcaacaacc 504 ||||| |||||||||||||||||| Sbjct: 494 acgagctcgacgtcagcaacaacc 517
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 390 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 83469 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 83415 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 acgagatcgacgtcagcaacaacc 504 ||||| |||||||||||||||||| Sbjct: 83378 acgagctcgacgtcagcaacaacc 83355
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 390 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 496 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 550 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 acgagatcgacgtcagcaacaacc 504 ||||| |||||||||||||||||| Sbjct: 587 acgagctcgacgtcagcaacaacc 610
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 415 tccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgctccctccgtc 474 ||||||||||||||||| | |||||||||| |||||| ||| | || | |||| | | Sbjct: 29238999 tccacctcaactccaaccgcttctgcggcgtgctccccgacaccttctcccacctcaggc 29239058 Query: 475 tcctccacgagatcgacgtcagcaacaacc 504 ||||||||||| ||||| |||||||||||| Sbjct: 29239059 tcctccacgagctcgacatcagcaacaacc 29239088 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 254 caactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcg 302 |||||||| |||||||||||||||| ||||| ||||||| | ||||||| Sbjct: 29238835 caactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 29238883 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 343 tcgacctcaaccacggcgacatcgccgg 370 ||||||||||||||| |||||||||||| Sbjct: 29238924 tcgacctcaaccacgccgacatcgccgg 29238951 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gatgatggggtcgacgacggcggcg 95 |||||| |||||||||||||||||| Sbjct: 15954191 gatgatcgggtcgacgacggcggcg 15954167
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 60.0 bits (30), Expect = 7e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 415 tccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgctccctccgtc 474 ||||||||||||||||| | |||||||||| |||||| ||| | || | |||| | | Sbjct: 1797 tccacctcaactccaaccgcttctgcggcgtgctccccgacaccttctcccacctcaggc 1856 Query: 475 tcctccacgagatcgacgtcagcaacaacc 504 ||||||||||| ||||| |||||||||||| Sbjct: 1857 tcctccacgagctcgacatcagcaacaacc 1886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 254 caactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcg 302 |||||||| |||||||||||||||| ||||| ||||||| | ||||||| Sbjct: 1633 caactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 1681 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 343 tcgacctcaaccacggcgacatcgccgg 370 ||||||||||||||| |||||||||||| Sbjct: 1722 tcgacctcaaccacgccgacatcgccgg 1749
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 383 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 442 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 59720 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 59661 Query: 443 c 443 | Sbjct: 59660 c 59660
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 383 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 442 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 25452829 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 25452770 Query: 443 c 443 | Sbjct: 25452769 c 25452769
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 383 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 442 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 25771499 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 25771440 Query: 443 c 443 | Sbjct: 25771439 c 25771439 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 440 cggcgcgctcccggacgcgctcc 462 ||||||||||||||||||||||| Sbjct: 5077014 cggcgcgctcccggacgcgctcc 5076992
>ref|NM_188650.1| Oryza sativa (japonica cultivar-group), Ozsa8253 predicted mRNA Length = 900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtgg 114 ||||||||||||||||||||||||||| Sbjct: 350 cggcggcgttcctggcgctggcggtgg 376
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtgg 114 ||||||||||||||||||||||||||| Sbjct: 98151 cggcggcgttcctggcgctggcggtgg 98177
>dbj|AK108936.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B02, full insert sequence Length = 1020 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtgg 114 ||||||||||||||||||||||||||| Sbjct: 255 cggcggcgttcctggcgctggcggtgg 281
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 467 cctccgtctcctccacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||| ||||| |||||||||||| Sbjct: 2571 cctccgcctcctccacgagctcgacctcagcaacaacc 2608
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 89 ggcggcgttcctggcgctggcggtggtgg 117 |||||||||||||||||||||| |||||| Sbjct: 27 ggcggcgttcctggcgctggcgctggtgg 55
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 89 ggcggcgttcctggcgctggcggtggtgg 117 |||||||||||||||||||||| |||||| Sbjct: 121091 ggcggcgttcctggcgctggcgctggtgg 121063
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 89 ggcggcgttcctggcgctggcggtggtgg 117 |||||||||||||||||||||| |||||| Sbjct: 51000 ggcggcgttcctggcgctggcgctggtgg 50972
>gb|BT016499.1| Zea mays clone Contig332 mRNA sequence Length = 1156 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtggtggc 118 |||| ||||||||||||||||| |||||||| Sbjct: 122 cggcagcgttcctggcgctggccgtggtggc 152
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 370 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 21747237 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 21747199 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 400 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 21747169 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 21747125 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 cacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||||||||| Sbjct: 21747089 cacgagctcgacgtcagcaacaacc 21747065 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tcgccgctgctgctcgcggcggcg 143 ||||||||||||||| |||||||| Sbjct: 7805993 tcgccgctgctgctcccggcggcg 7806016
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 287 cggcgtctactgcgcgacggcgc 309 ||||||||||||||||||||||| Sbjct: 449918 cggcgtctactgcgcgacggcgc 449940
>dbj|AK106650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F09, full insert sequence Length = 1720 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 440 cggcgcgctcccggacgcgctcc 462 ||||||||||||||||||||||| Sbjct: 267 cggcgcgctcccggacgcgctcc 289
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 474 ctcctccacgagatcgacgtcagcaacaacc 504 |||||||||||| ||||| |||||||||||| Sbjct: 29 ctcctccacgagctcgacatcagcaacaacc 59
>gb|AY107515.1| Zea mays PCO145505 mRNA sequence Length = 883 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtggtggc 118 |||| ||||||||||||||||| |||||||| Sbjct: 112 cggcagcgttcctggcgctggccgtggtggc 142
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 370 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 21675582 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 21675544 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 400 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 21675514 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 21675470 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 cacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||||||||| Sbjct: 21675434 cacgagctcgacgtcagcaacaacc 21675410 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tcgccgctgctgctcgcggcggcg 143 ||||||||||||||| |||||||| Sbjct: 7805874 tcgccgctgctgctcccggcggcg 7805897
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 332 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 370 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 65314 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 65352 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 480 cacgagatcgacgtcagcaacaacc 504 |||||| |||||||||||||||||| Sbjct: 65462 cacgagctcgacgtcagcaacaacc 65486 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 400 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 444 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 65382 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 65426
>ref|XM_528648.1| PREDICTED: Pan troglodytes similar to KIAA0037 (LOC473278), mRNA Length = 3795 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 ggcgttcctggcgctggcggtg 113 |||||||||||||||||||||| Sbjct: 522 ggcgttcctggcgctggcggtg 543
>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence Length = 185997 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 aactcgaggctggagaaggcct 195 |||||||||||||||||||||| Sbjct: 166435 aactcgaggctggagaaggcct 166414
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 aactcgaggctggagaaggcct 195 |||||||||||||||||||||| Sbjct: 74464 aactcgaggctggagaaggcct 74443
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gacgatgatggggtcgacgacg 89 |||||||||||||||||||||| Sbjct: 6215 gacgatgatggggtcgacgacg 6194
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 137 ggcggcgcagccggtgggggcgccgccggc 166 |||| ||||||||||| ||||||||||||| Sbjct: 205243 ggcgacgcagccggtgcgggcgccgccggc 205214
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 ggacgaccccaagaacatgacc 251 |||||||||||||||||||||| Sbjct: 125594 ggacgaccccaagaacatgacc 125573
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 ctgaagaaggccatcacggacg 234 |||||||||||||||||||||| Sbjct: 50824 ctgaagaaggccatcacggacg 50803
>ref|XM_480346.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1974 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 391 cggcggcgttgctggtgctggcggtggtg 363
>ref|XM_477307.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ggcggtggtggcgtcgccgct 127 ||||||||||||||||||||| Sbjct: 901 ggcggtggtggcgtcgccgct 881
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 7463 cggcggcgttgctggcgctggcggt 7487
>gb|AF082810.1| Baboon herpesvirus 2 strain A951 glycoprotein G (US4) gene, partial cds; glycoprotein gJ (US5) gene, complete cds; and glycoprotein gD (US6) gene, partial cds Length = 1137 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 1021 cggcggcgttgctggcgctggcggt 1045
>gb|AY582739.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly protein (HydEF) mRNA, complete cds Length = 3456 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 111 gtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||||||||||||||||| || ||||||||| Sbjct: 1861 gtggtggcgtcgccgctgcggccggcggcggcg 1893
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 gtcgacgatgatggggtcgacgacg 89 |||| |||||||||||||||||||| Sbjct: 150465 gtcgccgatgatggggtcgacgacg 150441
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gttcctggcgctggcggtggtggcg 119 ||||||| ||||||||||||||||| Sbjct: 4082298 gttcctgccgctggcggtggtggcg 4082322
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gcgttcctggcgctggcggtggtgg 117 |||||||||| |||||||||||||| Sbjct: 59784 gcgttcctggggctggcggtggtgg 59808
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gcggcgttcctggcgctggcg 110 ||||||||||||||||||||| Sbjct: 3734695 gcggcgttcctggcgctggcg 3734675
>dbj|AB232136.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:X313 Length = 5232 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 17 cggcggcgttgctggcgctggcggt 41
>dbj|AB232132.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:A951 Length = 5227 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 17 cggcggcgttgctggcgctggcggt 41
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 4501492 cggcggcgttgctggtgctggcggtggtg 4501520
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 gcggcgttcctggcgctggcggtgg 114 ||||||||||||||| ||||||||| Sbjct: 4284423 gcggcgttcctggcggtggcggtgg 4284447 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cgctgctgctcgcggcggcgc 144 ||||||||||||||||||||| Sbjct: 2776039 cgctgctgctcgcggcggcgc 2776019 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccctgcgcgcgcaccgtcgc 337 |||||||||||||||||||| Sbjct: 2257854 ccctgcgcgcgcaccgtcgc 2257873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctcgcggcggcgcagccggt 151 |||||||||||||||||||| Sbjct: 2126567 ctcgcggcggcgcagccggt 2126586 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 431636 tggcgctggcggtggtggcg 431617 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgcggcggcgcagccgg 150 |||||||||||||||||||| Sbjct: 339446 gctcgcggcggcgcagccgg 339465
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039C01 Length = 151054 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ggcggtggtggcgtcgccgct 127 ||||||||||||||||||||| Sbjct: 100788 ggcggtggtggcgtcgccgct 100768
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 25340 cggcggcgttgctggtgctggcggtggtg 25368
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 caaccacggcgacatcgccgg 370 ||||||||||||||||||||| Sbjct: 6656952 caaccacggcgacatcgccgg 6656932 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 cgacctcaaccacggcgacatcgc 367 |||||||||||||||||| ||||| Sbjct: 6162894 cgacctcaaccacggcgagatcgc 6162917
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gatgatggggtcgacgacggcggcg 95 |||||| |||||||||||||||||| Sbjct: 87640 gatgatcgggtcgacgacggcggcg 87616
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gatgatggggtcgacgacggcggcg 95 |||||| |||||||||||||||||| Sbjct: 167194 gatgatcgggtcgacgacggcggcg 167170
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 67382 cggcggcgttgctggtgctggcggtggtg 67410
>dbj|AK109294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-D03, full insert sequence Length = 533 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 217 cggcggcgttgctggtgctggcggtggtg 189
>dbj|AK107028.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A09, full insert sequence Length = 1974 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 cggcggcgttcctggcgctggcggtggtg 116 |||||||||| |||| ||||||||||||| Sbjct: 391 cggcggcgttgctggtgctggcggtggtg 363
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 gtcgacgatgatggggtcgacgacg 89 |||| |||||||||||||||||||| Sbjct: 98946 gtcgccgatgatggggtcgacgacg 98970
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 141569 cggcggcgttgctggcgctggcggt 141593
>gb|U14661.1|BHU14661 Baboon herpesvirus HVP2 gJ glycoprotein (US5) gene, complete cds, and gD glycoprotein (US6) gene, partial cds Length = 1645 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcggt 112 |||||||||| |||||||||||||| Sbjct: 876 cggcggcgttgctggcgctggcggt 900
>gb|BC106769.1| Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, mRNA (cDNA clone MGC:123421 IMAGE:40039722), complete cds Length = 2269 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 173 tggcgctggcggtggtggcg 154
>gb|BC106770.1| Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, mRNA (cDNA clone MGC:123422 IMAGE:40039723), complete cds Length = 2269 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 173 tggcgctggcggtggtggcg 154
>ref|NM_188071.1| Oryza sativa (japonica cultivar-group), Ozsa8491 predicted mRNA Length = 660 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cggcggcgttcctggcgctggcgg 111 |||||||| ||||||||||||||| Sbjct: 93 cggcggcgctcctggcgctggcgg 116
>gb|AC166364.2| Mus musculus BAC clone RP24-394E6 from chromosome 3, complete sequence Length = 227070 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 224564 tggcgctggcggtggtggcg 224583
>ref|XM_475853.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 285 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 17 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 60
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tacgtggcgctgcaggcgctgaag 218 |||| ||||||||||||||||||| Sbjct: 77275 tacgaggcgctgcaggcgctgaag 77298
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gctgctcgcggcggcgcagccggt 151 ||||||||||||||||||| |||| Sbjct: 409934 gctgctcgcggcggcgcaggcggt 409911
>gb|AY177757.1| Burkholderia pseudomallei 08 two-partner secretion system gene cluster, partial sequence Length = 20237 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 acggcgacatcgccggcacgctgc 378 |||||| ||||||||||||||||| Sbjct: 2769 acggcggcatcgccggcacgctgc 2792
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gcgcgacggcgcccgacgac 317 |||||||||||||||||||| Sbjct: 3158870 gcgcgacggcgcccgacgac 3158851 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cgctgccggaggagctgggc 392 |||||||||||||||||||| Sbjct: 977928 cgctgccggaggagctgggc 977947
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03, complete sequence Length = 151814 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gggcgccgccggcgaccaac 173 |||||||||||||||||||| Sbjct: 52775 gggcgccgccggcgaccaac 52756
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 40853 cgctgctgctcgcggcggcg 40872
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 ctgctgctcgcggcggcgcagccggtgg 153 |||||||||||||||||| ||| ||||| Sbjct: 1671297 ctgctgctcgcggcggcggagctggtgg 1671270
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cgctgccggaggagctgggc 392 |||||||||||||||||||| Sbjct: 2019729 cgctgccggaggagctgggc 2019748 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcgcgacggcgcccgacgac 317 |||||||||||||||||||| Sbjct: 1642143 gcgcgacggcgcccgacgac 1642162
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 41903 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 41946
>ref|NM_080466.1| Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (Kcnn3), mRNA Length = 2287 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 174 tggcgctggcggtggtggcg 155
>gb|AC103605.8| Mus musculus chromosome 3, clone RP23-335H1, complete sequence Length = 222210 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 202765 tggcgctggcggtggtggcg 202784
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 493462 cgctgctgctcgcggcggcg 493443
>gb|AC121079.20| Mus musculus chromosome 3, clone RP24-178P12, complete sequence Length = 177802 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 174670 tggcgctggcggtggtggcg 174651
>ref|XM_989192.1| PREDICTED: Mus musculus similar to Small conductance calcium-activated potassium channel protein 3 (SK3) (LOC671802), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 436 tggcgctggcggtggtggcg 417
>gb|AF431735.1| Leymus racemosus high-molecular-weight glutenin subunit 1Ax-like gene sequence Length = 2687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgatgatggggtcgacgacg 89 |||||||||||||||||||| Sbjct: 2417 cgatgatggggtcgacgacg 2398
>gb|AF357241.1| Mus musculus small-conductance calcium-activated potassium channel SK3 (SK3) mRNA, complete cds Length = 2287 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 174 tggcgctggcggtggtggcg 155
>ref|XM_801732.1| Trypanosoma cruzi strain CL Brener DNA-repair protein (Tc00.1047053510665.40) partial mRNA Length = 2430 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 acctcgccgtcttccacctc 422 |||||||||||||||||||| Sbjct: 515 acctcgccgtcttccacctc 496
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgatgatggggtcgacgacg 89 |||||||||||||||||||| Sbjct: 60710 cgatgatggggtcgacgacg 60691
>ref|XM_541119.2| PREDICTED: Canis familiaris similar to interleukin 20 receptor, alpha (LOC484002), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gctgctgctcgcggcggcgc 144 |||||||||||||||||||| Sbjct: 87 gctgctgctcgcggcggcgc 106
>emb|CR637419.1|CNS0EQSX Tetraodon nigroviridis full-length cDNA Length = 1105 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cggtggtggcgtcgccgctg 128 |||||||||||||||||||| Sbjct: 259 cggtggtggcgtcgccgctg 240
>gb|AC104329.22| Mus musculus strain C57BL/6J clone rp23-418c12 map 3, complete sequence Length = 197096 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 51121 tggcgctggcggtggtggcg 51140
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gcgcgacggcgcccgacgac 317 |||||||||||||||||||| Sbjct: 323778 gcgcgacggcgcccgacgac 323759
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 cggcgcagccggtgggggcgccgc 162 ||||||||||||||| |||||||| Sbjct: 4580329 cggcgcagccggtggcggcgccgc 4580352
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tacgtggcgctgcaggcgctgaag 218 |||| ||||||||||||||||||| Sbjct: 76115 tacgaggcgctgcaggcgctgaag 76138
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 117088 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 117131
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 cgctgccggaggagctgggc 392 |||||||||||||||||||| Sbjct: 2357038 cgctgccggaggagctgggc 2357019 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcgcgacggcgcccgacgac 317 |||||||||||||||||||| Sbjct: 1529222 gcgcgacggcgcccgacgac 1529241
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggcgctggcggtggtggc 118 |||||||||||||||||||| Sbjct: 136732 ctggcgctggcggtggtggc 136713
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gctgctgctcgcggcggcgc 144 |||||||||||||||||||| Sbjct: 274284 gctgctgctcgcggcggcgc 274303
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 141591 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 141634
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gcagctaccacggcgtctac 296 |||||||||||||||||||| Sbjct: 2835420 gcagctaccacggcgtctac 2835401
>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186714 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gtcgacgacggcggcgttcctggc 103 |||||||||||||||||| ||||| Sbjct: 63150 gtcgacgacggcggcgttgctggc 63127
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggcgctgcaggcgctgaaga 219 |||||||||||||||||||| Sbjct: 2288321 ggcgctgcaggcgctgaaga 2288302
>dbj|AK137738.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030001A14 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, full insert sequence Length = 2528 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 432 tggcgctggcggtggtggcg 413
>gb|AE009811.1|AE009811 Pyrobaculum aerophilum strain IM2 section 66 of 201 of the complete genome Length = 14032 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 gagctgggcctgctctccgacctcgccg 411 |||||| |||||| |||||||||||||| Sbjct: 632 gagctgagcctgccctccgacctcgccg 659
>dbj|AK170218.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630031K02 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, full insert sequence Length = 1493 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 432 tggcgctggcggtggtggcg 413
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gcggcgcgctcccggacgcgctcc 462 |||||| ||||||||||||||||| Sbjct: 89412 gcggcgagctcccggacgcgctcc 89389
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 cgccgctgctgctcgcggcggcgc 144 ||||||||| |||||||||||||| Sbjct: 2285060 cgccgctgccgctcgcggcggcgc 2285037
>gb|AE004572.1| Pseudomonas aeruginosa PAO1, section 133 of 529 of the complete genome Length = 10238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggcgtcgccgctgctgctcg 135 |||||||||||||||||||| Sbjct: 2245 ggcgtcgccgctgctgctcg 2264
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cggcggcgttcctggcgctggcgg 111 |||||||| ||||||||||||||| Sbjct: 99943 cggcggcgctcctggcgctggcgg 99920
>gb|AF164027.1|AF164027 Leishmania tropica surface antigen P2 (PSA-2) gene, complete cds Length = 1881 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggcgacatcgccggcacgctgccg 380 ||||||||| |||||||||||||| Sbjct: 646 ggcgacatcaccggcacgctgccg 669
>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 91 cgctgctgctcgcggcggcg 110
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cgctggcggtggtggcgtcgccgctgct 130 |||||||| ||| ||||||||||||||| Sbjct: 3354652 cgctggcgctggcggcgtcgccgctgct 3354625
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggcgctggcggtggtggc 118 |||||||||||||||||||| Sbjct: 4979497 ctggcgctggcggtggtggc 4979478 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gccggtgggggcgccgccggcgac 169 ||||||| |||||||||||||||| Sbjct: 3033527 gccggtgagggcgccgccggcgac 3033504
>emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE and eryBIII genes and eryB gene Length = 2760 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aggcgctgaagaaggccatc 227 |||||||||||||||||||| Sbjct: 1649 aggcgctgaagaaggccatc 1630
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full insert sequence Length = 1347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 120 cgctgctgctcgcggcggcg 139
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 acgtggcgctgcaggcgctg 215 |||||||||||||||||||| Sbjct: 313392 acgtggcgctgcaggcgctg 313373
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gtggcgtcgccgctgctgctcgcg 137 |||||| ||||||||||||||||| Sbjct: 176820 gtggcggcgccgctgctgctcgcg 176843
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full insert sequence Length = 1348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 121 cgctgctgctcgcggcggcg 140
>dbj|AK062463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D11, full insert sequence Length = 625 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcgtcgccgctgctgctcgcggcggcg 143 ||||| |||||| | ||||| || ||||||||||||||||||| Sbjct: 115 tggcggtggcggcgatggcggtgctgctgctgctcgcggcggcg 158
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 26 cgctgctgctcgcggcggcg 45
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gtcgacgacggcggcgttcctggc 103 |||||||||||||||||| ||||| Sbjct: 22960 gtcgacgacggcggcgttgctggc 22983
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gcagctaccacggcgtctac 296 |||||||||||||||||||| Sbjct: 2857274 gcagctaccacggcgtctac 2857255
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgctcgcggcggcg 143 |||||||||||||||||||| Sbjct: 2021075 cgctgctgctcgcggcggcg 2021056
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 102 gcgctggcggtggtggcgtcgccgctgctgct 133 ||||||||| ||| |||| ||||||||||||| Sbjct: 117842 gcgctggcgatggcggcggcgccgctgctgct 117873
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcctggcgctggcggtggtg 116 |||||||||||||||||||| Sbjct: 2010798 tcctggcgctggcggtggtg 2010817
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gcggcgcgctcccggacgcgctcc 462 |||||| ||||||||||||||||| Sbjct: 493 gcggcgagctcccggacgcgctcc 470
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tcgccgctgctgctcgcggcggcg 143 ||||||||||||||| |||||||| Sbjct: 104984 tcgccgctgctgctcccggcggcg 105007
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaacatgaccaacaactgg 260 |||||||||||||||||||| Sbjct: 1499771 agaacatgaccaacaactgg 1499790
>gb|DQ140280.1| Mus musculus small conductance calcium-activated potassium channel 3 (Kcnn3) mRNA, complete cds Length = 2196 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 126 tggcgctggcggtggtggcg 107
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tggcgctggcggtggtggcg 119 |||||||||||||||||||| Sbjct: 21579 tggcgctggcggtggtggcg 21598
>gb|M38342.1|PPTKBG31 Poa pratensis pollen allergen (KBG 31) mRNA, complete cds Length = 1322 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gcgctgaagaaggccatcac 229 |||||||||||||||||||| Sbjct: 988 gcgctgaagaaggccatcac 1007
>gb|L20708.1|SH1UL45A Pseudorabies virus helicase (UL5) and UL4 genes, complete cds Length = 3400 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gcggcgcgctcccggacgcgctcc 462 |||||| ||||||||||||||||| Sbjct: 329 gcggcgagctcccggacgcgctcc 306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,975,959 Number of Sequences: 3902068 Number of extensions: 3975959 Number of successful extensions: 113251 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104230 Number of HSP's gapped (non-prelim): 9004 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
