Clone Information

BLAST Search Result

Clone Name	bart43d07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)	37	0.049
2	FER_THEMA (P46797) Ferredoxin	34	0.24
3	FAS2_RHOFA (P46374) Ferredoxin fas2	33	0.41
4	M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kin...	33	0.54
5	VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor	33	0.70
6	VGLX_EHV1B (P28968) Glycoprotein X precursor	33	0.70
7	BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7	32	0.92
8	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	32	0.92
9	SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem...	32	0.92
10	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	32	0.92
11	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	32	0.92
12	FER_THELI (P29604) Ferredoxin	32	1.6
13	SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)	32	1.6
14	MYCN_HUMAN (P04198) N-myc proto-oncogene protein	32	1.6
15	TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibr...	32	1.6
16	TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibr...	32	1.6
17	Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916	32	1.6
18	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	32	1.6
19	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	31	2.0
20	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	31	2.0
21	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	31	2.0
22	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	31	2.0
23	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	31	2.0
24	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	31	2.0
25	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	31	2.0
26	BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec...	25	2.6
27	ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 ...	31	2.7
28	VG03_ICHV1 (Q00115) Hypothetical gene 3 protein	31	2.7
29	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	31	2.7
30	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	31	2.7
31	MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (P...	31	2.7
32	PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)	31	2.7
33	VRP1_YEAST (P37370) Verprolin	30	3.5
34	PEPA_ASPAW (P17946) Aspergillopepsin A precursor (EC 3.4.23.18)	30	3.5
35	ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (A...	30	3.5
36	K1683_HUMAN (Q9H0B3) Protein KIAA1683	30	3.5
37	UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (E...	30	4.5
38	PEPA_ASPSA (Q12567) Aspergillopepsin A precursor (EC 3.4.23.18) ...	30	4.5
39	PEPA_ASPNG (P55325) Aspergillopepsin A precursor (EC 3.4.23.18)	30	4.5
40	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	4.5
41	PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase...	30	4.5
42	SP5_MOUSE (Q9JHX2) Transcription factor Sp5	30	4.5
43	CSKI2_MOUSE (Q8VHK1) Caskin-2	30	4.5
44	SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)	30	4.5
45	SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF	30	4.5
46	ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat prot...	30	4.5
47	CUT2_CAEEL (P34682) Cuticlin-2 precursor	30	5.9
48	ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc fi...	30	5.9
49	MMPS3_MYCTU (P65378) Putative membrane protein mmpS3	29	7.8
50	MMPS3_MYCBO (P65379) Putative membrane protein mmpS3	29	7.8
51	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	29	7.8
52	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	29	7.8
53	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	29	7.8
54	US02_EHV1K (P32517) US1 protein	29	7.8
55	CSKI2_HUMAN (Q8WXE0) Caskin-2	29	7.8
56	DEND_HUMAN (O94850) Dendrin	29	7.8
57	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	7.8

>FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)|
          Length = 59

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 VDHR-CIDCATCRWMAPEVFKRVDG-QSAVAAQPTSEETRTKALQALLSCPTSSI 405
           +DH  CI C +C  + PEVF  +DG + A+   P S  T   A  A+ +CP  +I
Sbjct: 4   IDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDS--TAECAQDAIDACPVEAI 56

to top

>FER_THEMA (P46797) Ferredoxin|
          Length = 60

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDK 417
           CI C  C  + P+VF+  D   A   QP ++    K   A  SCPT +I  ++
Sbjct: 10  CIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAK--DAADSCPTGAISVEE 60

to top

>FAS2_RHOFA (P46374) Ferredoxin fas2|
          Length = 304

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +1

Query: 250 DHRCIDCATCRWMAPEVFKRV-DGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDKPAQ 426
           + RC     C  +APEVF++  DG   +     S +  +    A  SCP ++I  ++ A 
Sbjct: 7   ERRCFGSGQCVLVAPEVFEQSNDGTVTLLVDKPSPDNHSLVRAAARSCPATAIRFEENAM 66

Query: 427 DMLQVQNTFPLPIDDDLPGV 486
                + ++     DDLP +
Sbjct: 67  RQEPTEFSY-----DDLPAL 81

to top

>M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kinase 14 (EC|
           2.7.11.25) (NF-kappa beta-inducing kinase)
           (Serine/threonine-protein kinase NIK) (HsNIK)
          Length = 947

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
 Frame = +2

Query: 5   HKLSSARLGSSHRRSALETENFTRQSPWRSTFAPP-HPSPPRRLTCVRADAPPLSLWSTP 181
           H++S+A LG    R+  +      +SPWR  +  P HP P +        A P  L    
Sbjct: 640 HRVSAAELGGKVNRALQQVGGL--KSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRA 697

Query: 182 LCPLPRRSTAGGARRTCPATSSSITGASTVPP 277
             P P   T G A +  P         +  PP
Sbjct: 698 PGPRPAEETTGRAPKLQPPLPPEPPEPNKSPP 729

to top

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = +2

Query: 203 STAGGARRTCPATSSSITGASTVPPAGGWPRRCSRESTASXXXXXXXXXXXXXXXXXXXC 382
           +TA     +  + S+S TGAST  P+       +  ST++                    
Sbjct: 323 TTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAE- 381

Query: 383 SLALHPLSTPTSLHRTCSKCRTRSLSP-STMIFPEFTSVVT 502
           S    P STPT+   T S+  T + SP ST +    TS  T
Sbjct: 382 STTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATT 422



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/114 (20%), Positives = 36/114 (31%)
 Frame = +2

Query: 173 STPLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWPRRCSRESTASXXXXXXXXXX 352
           STP    P  +T   A  T P T+S+ T  +T           +  +TA+          
Sbjct: 155 STPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTA-ATTTAATTTAATTTAATTTAA 213

Query: 353 XXXXXXXXXCSLALHPLSTPTSLHRTCSKCRTRSLSPSTMIFPEFTSVVTILRT 514
                     +      +  T+   T S   T + + ST      T+  T   T
Sbjct: 214 TTTAATTTAATTTAATTTAATTTAATTSSATTAATTSSTTTAATTTAATTTAAT 267

to top

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = +2

Query: 203 STAGGARRTCPATSSSITGASTVPPAGGWPRRCSRESTASXXXXXXXXXXXXXXXXXXXC 382
           +TA     +  + S+S TGAST  P+       +  ST++                    
Sbjct: 254 TTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAE- 312

Query: 383 SLALHPLSTPTSLHRTCSKCRTRSLSP-STMIFPEFTSVVT 502
           S    P STPT+   T S+  T + SP ST +    TS  T
Sbjct: 313 STTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATT 353

to top

>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 77  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           Q P RS   P + S     T  +A  PP+ L S    P    STAG  R+T  A +++ T
Sbjct: 787 QHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAAAAATTT 846

Query: 257 GASTVPPA 280
             +T   A
Sbjct: 847 STATAAAA 854

to top

>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
 Frame = +2

Query: 29  GSSHRRSALETENFTRQSPWRSTFAPPHPS-PPRRLTCVRADAPPLSLWSTPL------- 184
           G   RR+    E  +  S W+ T  PP P  PPRR   + A  PP  +   P        
Sbjct: 141 GPGRRRADNGEEGASLGSGWKLTEEPPLPPPPPRRKGPLPAGPPPEDVPGPPKRKEREAG 200

Query: 185 --CPLPRRSTAGGARR--------TCPATSSSITGASTVPP 277
              P PR+   GG  R         C    S   G   +PP
Sbjct: 201 NEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPP 241

to top

>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 33/106 (31%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
 Frame = +2

Query: 5    HKLSSARLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 181
            H     R GS    SA  T       P  S F    P P   +  +R D PP    + P 
Sbjct: 777  HGPQPPRKGSEPLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPS 836

Query: 182  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWPRRCS 304
                   P PR    GG+RR    T  +  G  T  P+GG P R S
Sbjct: 837  GRPALSAPAPRLG-VGGSRRLPFPTHRAPPGLLTRVPSGG-PARYS 880

to top

>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = +2

Query: 80  SPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           S W +  +PP   PPR  +     APPLS     L  LPR ++  G+ R  P   ++   
Sbjct: 655 SHWSALLSPP--VPPRPPSSGPPPAPPLS---PALSGLPRPASPYGSLRRHPPPWAAPAH 709

Query: 260 ASTVPPAGGW 289
               P A GW
Sbjct: 710 VPPAPQASGW 719

to top

>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +2

Query: 80  SPWR-STFAPPHPSPPRRL---TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSS 247
           SP R ST +  HP+PP R    T     +PP +       P+ R +    +R T P   S
Sbjct: 115 SPARPSTESVAHPAPPTRPANPTPTPTSSPPKTAARPINAPISRPAIP--SRPTAPTPRS 172

Query: 248 SITGASTVPP-AGGWPRRCSRESTAS 322
           +   +S VPP AGG   R  + ST S
Sbjct: 173 ANKPSSPVPPSAGGKDPRAGQTSTTS 198

to top

>FER_THELI (P29604) Ferredoxin|
          Length = 59

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 405
           CI C  C  + P+VF+  D   A A    +E     A +A  SCPT +I
Sbjct: 10  CIGCGVCASICPDVFEMDDDGKAKAL--VAETDLECAKEAAESCPTGAI 56

to top

>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 38  HRRSALETENFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 208
           H+   L  E+ T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 528 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTT 587

Query: 209 AGGARRTCP 235
              A    P
Sbjct: 588 VVSAVPVMP 596

to top

>MYCN_HUMAN (P04198) N-myc proto-oncogene protein|
          Length = 464

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = -3

Query: 312 DSLEHLRGHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQV 133
           + L+H RG P AG T  +P      AG    A PA    GRGH G     R GA+   ++
Sbjct: 132 EKLQHGRGPPTAGSTAQSPG-----AG---AASPA----GRGHGGAAGAGRAGAALPAEL 179

Query: 132 SRRGGE 115
           +    E
Sbjct: 180 AHPAAE 185

to top

>TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 382

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 273 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 97
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 48  GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 104

to top

>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 273 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 97
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 106 GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 162

to top

>Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916|
          Length = 629

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +2

Query: 104 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST-AGGARRTCPATSSSITGASTV--P 274
           PP P+ PR  +  R  APP  ++ T    +P   T A G R      S S+  A+ V  P
Sbjct: 349 PPRPASPRLRSSPRPSAPPSKIFRTRALRVPGVGTGAPGRRSRARNASGSVVAAAEVSDP 408

Query: 275 PAGG 286
            A G
Sbjct: 409 DAHG 412

to top

>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 38  HRRSALETENFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 208
           H+   L  E+ T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589

Query: 209 AGGARRTCP 235
              A    P
Sbjct: 590 VVSAVPVMP 598

to top

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R        PP  ++  PL  LP  + +G      P    S++G+
Sbjct: 314 PSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSGPPP---PPPPLSVSGS 370

Query: 263 STVPP 277
              PP
Sbjct: 371 VAPPP 375

to top

>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
 Frame = +2

Query: 74   RQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLW--STPLCPLPRRSTAGGARRTCPATSS 247
            +Q     T  P  P PPR +      APP      S    P P R      R+       
Sbjct: 1095 QQKDSSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARERVWSTRKAQERPRR 1154

Query: 248  SITGASTVPPAGGWP 292
               G S +PP GG P
Sbjct: 1155 DNLGGSQLPPQGGLP 1169

to top

>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
 Frame = +2

Query: 11  LSSARLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLS--LWSTPL 184
           +SS    S  R   L +  F    P   T  PP P PPR  +   + +P  S  +   P 
Sbjct: 309 VSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPCVPPAPE 368

Query: 185 CPLPRRSTAGGARRTCPA----TSSSITGASTVP 274
             LPR  T G     CP+    T  S    +T P
Sbjct: 369 VALPRPVTQGAGPGKCPSPNLQTQESPVATATSP 402

to top

>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 29/106 (27%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
 Frame = +2

Query: 179 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWPR-------RCSRESTASXXXXX 337
           P  PLP R+   G RR   A      GA+ VP AGG          R  R  +A+     
Sbjct: 79  PPGPLPGRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAAS 138

Query: 338 XXXXXXXXXXXXXXCSLALHPLSTPTSLHRTCSKCRTRSLSPSTMI 475
                          +  L     P S   + S C TRSL   T++
Sbjct: 139 SSSSSSAAAASHSPGAAGL-----PASCSASASLC-TRSLDRKTLL 178

to top

>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPPSMAGS 366

Query: 263 STVPP 277
           +  PP
Sbjct: 367 TAPPP 371

to top

>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1798

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 10/45 (22%)
 Frame = -3

Query: 285  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHS 181
            PP+G  V  PV          +DEE  G    + PA+E RGRG S
Sbjct: 963  PPSGEGVSGPVTEHSGEQRPKLDEEAVGRSSGSSPAMETRGRGTS 1007

to top

>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -3

Query: 294 RGHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGG 154
           R   P+  +V  P + EE  G     PP    RGRG    +  D GG
Sbjct: 687 RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGG 733

to top

>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 24.6 bits (52), Expect(2) = 2.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 189  PSPGARQQAAPAERVRRLLRRSP 257
            P+P ARQ   P ER R + R  P
Sbjct: 1416 PTPSARQVPEPGERSRTMPRTVP 1438



 Score = 24.6 bits (52), Expect(2) = 2.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 77   QSPWRSTFAPPHPSPPRR 130
            Q+P+  TF PP P+P  R
Sbjct: 1404 QNPYGMTFQPPPPTPSAR 1421

to top

>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
 Frame = +2

Query: 62   ENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA------- 220
            E+FT+  P  S F PP PSP    + V  D   L  W+  L P     T   A       
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAGPETWTSAPSLPRLV 1635

Query: 221  ----RRTCPATSSSITGASTVPPAGGWP 292
                R TC A     TG S     GG P
Sbjct: 1636 HEPVRCTCSAQG---TGFSCPSSVGGHP 1660

to top

>VG03_ICHV1 (Q00115) Hypothetical gene 3 protein|
          Length = 302

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 104 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           PP PSP    TC    + P SL S+P+ P P  S    A    P+ +  IT
Sbjct: 182 PPPPSPSDDTTC-EIPSLPSSLVSSPVNPAPMYSPVSDAPLNTPSPNMMIT 231

to top

>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPLSMAGS 366

Query: 263 STVPP 277
           +  PP
Sbjct: 367 TAPPP 371

to top

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
 Frame = +2

Query: 32  SSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------LCPL 193
           S  RRS        R+SP  +   PP P PPRR    R    P     TP        P 
Sbjct: 556 SRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRR----RRSPTPPPRRRTPSPPPRRRSPS 611

Query: 194 PRRSTAGGARRTCPATSSSITGASTVPP 277
           PRR +    RR  P+       AS  PP
Sbjct: 612 PRRYSPPIQRRYSPSPPPKRRTASPPPP 639

to top

>MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (Protein string)|
           (Cdc25-like protein)
          Length = 479

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/83 (27%), Positives = 32/83 (38%)
 Frame = +2

Query: 29  GSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST 208
           G S RR ++       +S   ST  PP  +P     C +   PP S   +P+    R   
Sbjct: 168 GLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARDCFKRPEPPASANCSPI-QSKRHRC 226

Query: 209 AGGARRTCPATSSSITGASTVPP 277
           A   +  CPA S       + PP
Sbjct: 227 AAVEKENCPAPSPLSQVTISHPP 249

to top

>PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 398

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -1

Query: 404 IEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQSMHR*STKKSPDTF 225
           I DVG +S A      V + +  AAT  W   L    GA  +Q        + K + +  
Sbjct: 293 ILDVGPQSVA-----RVHAAIDDAATLVWNGPL----GAFEMQPFDRGTVAAAKHAAERT 343

Query: 224 CGRRLLSSAGGGDTVA 177
             ++L+S AGGGDTVA
Sbjct: 344 KAKKLISIAGGGDTVA 359

to top

>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 17/88 (19%)
 Frame = +2

Query: 65  NFTRQSPWRSTFAPPHPS----PPRRLTCVRADAPP-------------LSLWSTPLCPL 193
           N  + +P   T APP P+    PP + + + A  PP             LS  S PL PL
Sbjct: 366 NSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSASSIPLAPL 425

Query: 194 PRRSTAGGARRTCPATSSSITGASTVPP 277
           P            P+ ++S+  A   PP
Sbjct: 426 PPPPP--------PSVATSVPSAPPPPP 445

to top

>PEPA_ASPAW (P17946) Aspergillopepsin A precursor (EC 3.4.23.18)|
          Length = 394

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
 Frame = +1

Query: 226 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 405
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQNTANDGLLGLAFSSI 197

Query: 406 HTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 534
           +T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

to top

>ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 11/88 (12%)
 Frame = +2

Query: 62   ENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA------- 220
            E+FT+  P  S F PP PSP    + +  D   L  W+T L P     T   A       
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPLSPDEDSLLAWNTSLPPTAGPETWTWAPSLPRLV 1635

Query: 221  ----RRTCPATSSSITGASTVPPAGGWP 292
                R TC A     TG S     GG P
Sbjct: 1636 HEPVRCTCSAQG---TGFSCPSSVGGHP 1660

to top

>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADA-----PPLSLWSTPLCPLPRR---------STAGGARRTC 232
           T  PP  SP  ++T ++  A     P ++  +   CP+P           S  G  R+TC
Sbjct: 360 TTTPPKTSPVPKVTIIKTPAQMYPGPTVTKTAPHTCPMPTMTKIQVHPTASRTGTPRQTC 419

Query: 233 PAT 241
           PAT
Sbjct: 420 PAT 422

to top

>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 36)
           (Ubiquitin-specific-processing protease 36)
           (Deubiquitinating enzyme 36)
          Length = 1121

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
 Frame = +2

Query: 86  WRST---FAPPHPSPPRRLTCVRADAPPL--SLW----STPLCPLPRRSTAGGARRTCPA 238
           WR+T     PP PSP   LT     + P+  S W    +  + P P+ S+     R  P 
Sbjct: 700 WRATGNDLRPPPPSPSSDLTHPMKTSHPVVASTWPVHRARAVSPAPQSSS-----RLQPP 754

Query: 239 TSSSITGASTVP--PAGGWPRRCSRESTA 319
            S   T  S+ P  P    PR CS  STA
Sbjct: 755 FSPHPTLLSSTPKPPGTSEPRSCSSISTA 783

to top

>PEPA_ASPSA (Q12567) Aspergillopepsin A precursor (EC 3.4.23.18)|
           (Aspergillopepsin I)
          Length = 394

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
 Frame = +1

Query: 226 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 405
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQDTANDGLLGLAFSSI 197

Query: 406 HTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 534
           +T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

to top

>PEPA_ASPNG (P55325) Aspergillopepsin A precursor (EC 3.4.23.18)|
          Length = 394

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
 Frame = +1

Query: 226 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 405
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQDTANDGLLGLAFSSI 197

Query: 406 HTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 534
           +T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

to top

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 36/133 (27%), Positives = 48/133 (36%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R T +PP   PP+R    RA   P S       P P++ ++  A+R  P+ SS     
Sbjct: 603 PKRRTASPP--PPPKR----RASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKG 656

Query: 263 STVPPAGGWPRRCSRESTASXXXXXXXXXXXXXXXXXXXCSLALHPLSTPTSLHRTCSKC 442
           S        P R +RE+ +                       A H  S+P  L R  S  
Sbjct: 657 SP-------PSRSNRETRSPPQNKRDSPSPRPR---------ASHTSSSPPPLRRGASAS 700

Query: 443 RTRSLSPSTMIFP 481
             R  SPS    P
Sbjct: 701 PQRRQSPSPSTRP 713



 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 74  RQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAG----GARRTCPAT 241
           R+SP       P P P RR    R  +PP+    +P  P P+R TA       RR  P+ 
Sbjct: 564 RRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSP-SPPPKRRTASPPPPPKRRASPSP 622

Query: 242 SSSITGASTVPP 277
            S    + + PP
Sbjct: 623 QSKRRVSHSPPP 634

to top

>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 256 RCIDCATCRWMAPEVFKRVDGQSAV--AAQPTSEETRTKALQALLS-CPTSSIHTDKPA 423
           +C+    C   APEVF + D    V   A PTS  TR  A +A  +  P SS    +PA
Sbjct: 9   QCVGAGQCVLNAPEVFDQDDDGVVVLLRADPTSGTTRRSARRATCARRPRSSSRRTEPA 67

to top

>SP5_MOUSE (Q9JHX2) Transcription factor Sp5|
          Length = 398

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 32/126 (25%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPP----LSLWSTPLCPLPRRSTAGGARRTCPATSSS 250
           P  S   PP P PP   TC +    P    L  WS P      +S AG      P TS S
Sbjct: 157 PGYSNLLPPPPPPPPPPTCRQLSPAPAPDDLPWWSIP------QSGAGPGSSGVPGTSLS 210

Query: 251 ITGASTVPPAGGWPRRCSRESTASXXXXXXXXXXXXXXXXXXXCSLALHPLSTP-TSLHR 427
            +  +  P A  +P   +  + A+                      AL     P  +  R
Sbjct: 211 -SACAGPPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATAR 269

Query: 428 TCSKCR 445
            C +CR
Sbjct: 270 RCRRCR 275

to top

>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +2

Query: 71   TRQSPWRSTFA------PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTC 232
            TR +P   +FA       P P PP+RL+ V     P SL  T     P+    G  RRT 
Sbjct: 847  TRGTPRSQSFALRARRKGPPPPPPKRLSSVSGSTEPPSLDGT---SGPKEGATGPRRRTL 903

Query: 233  PATSSSITGASTVP 274
                S  TG S  P
Sbjct: 904  ----SEPTGPSESP 913

to top

>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/106 (29%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
 Frame = +2

Query: 5    HKLSSARLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 181
            H     R GS    SA  T       P  + F    P P   +  +R D PP    + P 
Sbjct: 806  HGPQPPRKGSEPLASAPFTSRPPASEPGAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPS 865

Query: 182  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWPRRCS 304
                   P PR   +G  R   P T  +  G  T  P+GG P R S
Sbjct: 866  GRPALSAPAPRLGVSGSRRLPFP-THRAPPGLLTRVPSGG-PSRYS 909

to top

>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = +2

Query: 74  RQSPWRSTFAPPHPSPPRRLTCVRADAPP-------LSLWSTPLCPLPRRSTAGGARRTC 232
           +Q P  S  A P P PP  +   R   PP             P+ P   +   GG     
Sbjct: 76  QQQPRPSPMARPGPPPPAAMA--RPGGPPQVSQPGGFPPVGRPVAPPSNQPPFGGR---- 129

Query: 233 PATSSSITGASTVPPAGGWP 292
           P+T   + G S+ P  GG+P
Sbjct: 130 PSTGPLVGGGSSFPQPGGFP 149

to top

>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/70 (32%), Positives = 29/70 (41%)
 Frame = +2

Query: 77  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           Q P R++ A P P PPR       +APP SL  +        STA       P    +I 
Sbjct: 274 QGPPRTSLALPPPLPPR-------EAPPPSLPDS-------NSTALATSAQTPTVRKTIV 319

Query: 257 GASTVPPAGG 286
             +T PP  G
Sbjct: 320 TLNTPPPTTG 329

to top

>CUT2_CAEEL (P34682) Cuticlin-2 precursor|
          Length = 231

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = +2

Query: 101 APPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT----GAST 268
           APP P PP    C     PPL L    L  L   S  GG     P  ++ I     G +T
Sbjct: 30  APPPPPPP--CGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYAT 87

Query: 269 VP--PAGGW 289
            P  P GG+
Sbjct: 88  APAAPVGGY 96

to top

>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)|
          Length = 2025

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/84 (23%), Positives = 32/84 (38%)
 Frame = +2

Query: 23  RLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRR 202
           R    HR  + ET +   QSP     + PHP+ P        ++PP      P+C +   
Sbjct: 480 RSSDPHRPESRETHHSNTQSP---EVSHPHPASPVDPYLRTKNSPPFLKSDHPVCHVSGP 536

Query: 203 STAGGARRTCPATSSSITGASTVP 274
              G   ++  A    +  A + P
Sbjct: 537 EVVGSGFQSSVAVRCMLPSAPSTP 560

to top

>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

to top

>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

to top

>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = +2

Query: 107  PHPSPPRRLTCVRADAPPLSLWSTPLCPL-----PRRSTAGGARRTCPATSSSITGASTV 271
            P PSPPR   C+ AD   LS  S  +  L     P R   G A+   PA    I G  + 
Sbjct: 2543 PRPSPPRPDVCM-ADPEGLSSESGRVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSP 2601

Query: 272  PPAGGWPRRCSR 307
             P  G   R SR
Sbjct: 2602 TPGKGPVDRTSR 2613

to top

>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 179 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 286
           P  PLP R+   G RR   A   +  GA+ VP AGG
Sbjct: 59  PPGPLPGRAGGTGRRRRRGAPQPAAGGAAPVPAAGG 94

to top

>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R +      PP  ++  P   LP  + +G      P    S+ G 
Sbjct: 314 PSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGP-----PPPPPSVLGV 368

Query: 263 STVPP 277
             V P
Sbjct: 369 GPVAP 373

to top

>US02_EHV1K (P32517) US1 protein|
          Length = 303

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
 Frame = +2

Query: 110 HPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRT------CPATSSSITGASTV 271
           HP    R+     D   L     P  PLPRR  + G  R        PA + S T A+  
Sbjct: 210 HPPTVNRVIYAVVDPARLREIPAPGRPLPRRRPSEGGMRAPRRRSRAPAPARS-TAAAAT 268

Query: 272 PPAGGWPR 295
           PP  G PR
Sbjct: 269 PPRPGDPR 276

to top

>CSKI2_HUMAN (Q8WXE0) Caskin-2|
          Length = 1202

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
 Frame = +2

Query: 41   RRSALETENFTRQSPWRSTFA------PPHPSPPRRLTCVRADAPPLSLWSTPL--CPLP 196
            R S   T    R +P   +FA       P P PP+RL+ V   +P       PL   P P
Sbjct: 840  RTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPE----PPPLDGSPGP 895

Query: 197  RRSTAGGARRTC--PATSSSITGASTVPPAGGWPRRCSRE 310
            +    G  RRT   PA  S   G    PPA   P   + E
Sbjct: 896  KEGATGPRRRTLSEPAGPSEPPG----PPAPAGPASDTEE 931

to top

>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -2

Query: 454 GTCSALGACPVQACRCG*RM*GKRARPAVPWSWFPRRWVAPPRRTGRRLS*TPPGP 287
           G+ +A    P  A R    + G R        WFP+ W+  P++   R S T P P
Sbjct: 295 GSATAAPCAPHPAPRSRHHLKGSREGKEGEQIWFPKCWIPSPKKQPPRHSQTLPRP 350

to top

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +2

Query: 41   RRSALETENFTRQSPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 217
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 921  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 980

Query: 218  ARRTCP--ATSSSITGASTVPPAG 283
            A +  P       + G    PP G
Sbjct: 981  APKPDPLKIAKGKLAGPKETPPNG 1004


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,455,263
Number of Sequences: 219361
Number of extensions: 1832002
Number of successful extensions: 7867
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 7076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7820
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result