>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)|
           [Contains: Micronuclear linker histone-alpha;
           Micronuclear linker histone-beta; Micronuclear linker
           histone-delta; Micronuclear linker histone-gamma]
          Length = 633

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
 Frame = +1

Query: 49  HAATNRQ-------RRQHVKGPKNEAS------NYPNENRDDRKDVNHMSTRGMDANTSE 189
           HA T++Q       RRQ     K + S      N   E R  + +    S      + S+
Sbjct: 361 HADTSKQMEDEGQKRRQSSSSAKRDESSKKSRRNSMKEARTKKANNKSASKASKSGSKSK 420

Query: 190 HRKMSKPEVKNSAAGTHS--RSHWKPKXXXXXXXXXXXXTMEGLVDSAALQDSSNRNSNQ 363
            +  SK + K+S+ G +S  RS  KPK            T +   ++++   +  R   +
Sbjct: 421 GKSASKSKGKSSSKGKNSKSRSASKPKSNAAQNSNNTHQTADSSENASSTTQTRTRGRQR 480

Query: 364 GKGDMTHVEENQKSES 411
            + DM + + N KS S
Sbjct: 481 EQKDMVNEKSNSKSSS 496

>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing|
           factor SRP75) (SRP001LB)
          Length = 494

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +1

Query: 46  EHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPEVKNS 225
           E+A TN++ R   +       N P+E+R   K  +   +R    + S  R  S+     S
Sbjct: 432 ENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSR-----S 486

Query: 226 AAGTHSRS 249
            + +HSRS
Sbjct: 487 RSRSHSRS 494

>SVF1_EMENI (Q5BH63) Survival factor 1|
          Length = 546

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 534 AWLPSIITPSPVCAASPVLPPVVLSLATGCMIKLL 430
           A L + I+P P  A++P  P  +L++ TGC I +L
Sbjct: 356 ATLSTYISPQPSLASAPTTPSSLLNIDTGCYIHIL 390

>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
           arginine/serine-rich 2-interacting protein)
           (SC35-interacting protein 1) (CTD-associated SR protein
           11) (Splicing regulatory protein 129) (SRrp129)
           (NY-REN-40 antigen)
          Length = 1148

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +1

Query: 34  SATKEHAATNRQRRQHVKGPKNEASNY--PNENRDDRKDVNHMSTRGMDAN----TSEHR 195
           S + ++ +   +++   + PK + +     +++R  ++D    S R    +    TS   
Sbjct: 517 SPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSREN 576

Query: 196 KMSKPEVKNSAAGTHSRS 249
           K S+P VK+S+ G  SRS
Sbjct: 577 KRSQPRVKDSSPGEKSRS 594

>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin|
            phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
            sialoprotein (DSP)]
          Length = 1253

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/110 (16%), Positives = 42/110 (38%)
 Frame = +1

Query: 97   NEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPEVKNSAAGTHSRSHWKPKXXXX 276
            + +++  + +  D  D N  S     +++S        +  NS+  + S +         
Sbjct: 872  DSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSN 931

Query: 277  XXXXXXXXTMEGLVDSAALQDSSNRNSNQGKGDMTHVEENQKSESHENAE 426
                          DS+   DSSN + +   GD ++  ++  S S ++++
Sbjct: 932  SSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSGDSSNSSDSSDSNSSDSSD 981

>YA35_SCHPO (Q09712) Hypothetical protein C18B11.05 in chromosome I|
          Length = 426

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = -2

Query: 144 IFPVISVLIWVVTCLIFWALNMLPP--------LPVSCSMFFCGTGR*LSSFR 10
           I+P +    W V  L +W LN +P         +P+  ++F+  +G  L SFR
Sbjct: 294 IYPAVQEKYWNVGFLRYWTLNNIPNFLFALLSIIPILFALFYSISGSTLHSFR 346

>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +1

Query: 34   SATKEHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPE 213
            +A ++  A  +Q  Q ++   N+      E  +++  +  + T   DA+  +   + K  
Sbjct: 1085 AAEEQFQALVKQMNQTLQDKTNQIDLLQAEISENQAIIQKLITSNTDASDGDSVALVKET 1144

Query: 214  VKNSAAGTHSRSHWKPK 264
            V  S   T S  HWKP+
Sbjct: 1145 VVISPPCTGSSEHWKPE 1161

>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25|
          Length = 415

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
 Frame = +1

Query: 34  SATKEHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKP- 210
           S+ ++H    R  R      +  AS  P+  RDDR+D +       D N+   R+ ++  
Sbjct: 245 SSRRDHDRDERYDR----AARRSASPRPDRRRDDRRDRDQDQDYRRDRNSRSSRRDARSS 300

Query: 211 ---------EVKNSAAGTHSRSHWKPKXXXXXXXXXXXXTMEGLVDSAALQDSSNRNSNQ 363
                      +N   G+HSR+                     L +  A          Q
Sbjct: 301 RDRDTDAFGRDRNRDRGSHSRNGNADANADQHAQELEEQRKRRLAEMQANAQDMEATRRQ 360

Query: 364 GKGDMTHVEENQKSE 408
              ++T +EE Q+ E
Sbjct: 361 RVAEVTALEEKQREE 375

>PNT2_DROME (P51023) ETS-like protein pointed, isoform P2 (D-ETS-2)|
          Length = 718

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 15/128 (11%)
 Frame = +1

Query: 82  VKGPKNEASNYPNENR--------DDRKDVNHMSTRGMDANTSEHRKMSKPEVKNSAAGT 237
           V G  ++ +NYPNE          + R  ++++++ G   N + HR         + + T
Sbjct: 271 VCGSDHQVANYPNETHANSNNSSINSRLSMDYVTSAGNSDNKNFHRATPHSHNGYNTSNT 330

Query: 238 HSR-------SHWKPKXXXXXXXXXXXXTMEGLVDSAALQDSSNRNSNQGKGDMTHVEEN 396
           H R          + +                 +   A+Q S+N N+N    +  +   N
Sbjct: 331 HDRINNSTPPQQQQSQQPTVNGSGSASSNNNNSMLPPAVQQSNNENNNTSSSNTNNSSNN 390

Query: 397 QKSESHEN 420
             +    N
Sbjct: 391 NNNSGGSN 398

>MYCD_RAT (Q8R5I7) Myocardin|
          Length = 938

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/74 (21%), Positives = 35/74 (47%)
 Frame = +1

Query: 40  TKEHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPEVK 219
           +++     +Q++Q  +  + +  +YP  ++   K+ N   TR  +++++         VK
Sbjct: 303 SQQQQQQQQQQQQQQQQQQQQRFSYPGMHQAHLKEPNEQMTRNPNSSSTPLNNTPLSPVK 362

Query: 220 NSAAGTHSRSHWKP 261
           NS +G    S  KP
Sbjct: 363 NSLSGQTGVSSLKP 376

>OR1L1_HUMAN (Q8NH94) Olfactory receptor 1L1 (Olfactory receptor 9-C) (OR9-C)|
          Length = 310

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 193 YVQKCLHPFHVLTCDSHLSCHLCSHLGSYLPHF 95
           YV  C +PFH +T  SH  C L   L   +PHF
Sbjct: 123 YVAIC-NPFHYITIMSHRCCVLLLVLSFCIPHF 154

>POLG_BVDVS (Q01499) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3898

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 34  SATKEHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPE 213
           S TKE  AT +++++  +  K      P E+  D K     +T  +D    + +K  K +
Sbjct: 169 SDTKEEGATKKKQQKPDRLEKGRMKIVPKESEKDSKTKPPDATIVVDGVKYQVKKKGKVK 228

Query: 214 VKNSAAGTHSRSHWKPK 264
            KN+  G +   +  P+
Sbjct: 229 SKNTQDGLYHNKNKPPE 245

>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.1.8)|
           (Peptidyl-prolyl isomerase G) (PPIase G) (Rotamase G)
           (Cyclophilin G) (Clk-associating RS-cyclophilin)
           (CARS-cyclophilin) (CARS-Cyp) (SR-cyclophilin) (SRcyp)
           (SR-cyp) (CASP10)
          Length = 754

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 27/133 (20%), Positives = 51/133 (38%)
 Frame = +1

Query: 43  KEHAATNRQRRQHVKGPKNEASNYPNENRDDRKDVNHMSTRGMDANTSEHRKMSKPEVKN 222
           +  +   R+RR+  +  + E S   + N+D  ++    S+   + + SE R  SK    N
Sbjct: 615 RSRSKDRRRRRRDSRSSEREESQ--SRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHN 672

Query: 223 SAAGTHSRSHWKPKXXXXXXXXXXXXTMEGLVDSAALQDSSNRNSNQGKGDMTHVEENQK 402
           S+  +  +   + +                      L+ S  +N    K   +  +ENQK
Sbjct: 673 SSNNSREKKADRDQSPFSKIKQSS--------QDDELKSSMLKNKEDEKIRSSVEKENQK 724

Query: 403 SESHENAEQQQLN 441
           S+  EN    + N
Sbjct: 725 SKGQENDHVHEKN 737


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.301    0.116    0.319 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,357,471
Number of Sequences: 219361
Number of extensions: 1438434
Number of successful extensions: 2931
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)