ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart43a07 |
|---|---|
| Clone Library Name | barley_pub |
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 306 bits (785), Expect = 2e-83 Identities = 152/152 (100%), Positives = 152/152 (100%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 120 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 152
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 300 bits (768), Expect = 2e-81 Identities = 148/152 (97%), Positives = 151/152 (99%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAGMAPEGSQFDAK+YDSKMQELL+QGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VECQALVLAPTRE Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRE 120 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 152
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 276 bits (707), Expect = 2e-74 Identities = 139/152 (91%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFDA+ YD+KM ELL E +EFFTSYDEV+ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQQEFFTSYDEVYESFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 276 bits (706), Expect = 3e-74 Identities = 139/152 (91%), Positives = 143/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFD K YD KMQE+L TE+FFTSYD+V ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEIL----TEDFFTSYDDVCESFDSMGLQENLLRGIYAYG 56 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE Sbjct: 57 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 116 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 117 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 148
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 276 bits (706), Expect = 3e-74 Identities = 138/152 (90%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 276 bits (706), Expect = 3e-74 Identities = 138/152 (90%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 276 bits (706), Expect = 3e-74 Identities = 138/152 (90%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 276 bits (706), Expect = 3e-74 Identities = 138/152 (90%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 273 bits (699), Expect = 2e-73 Identities = 137/152 (90%), Positives = 143/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG APEGSQFDA+ +D+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGSQFDARQFDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 269 bits (688), Expect = 4e-72 Identities = 135/152 (88%), Positives = 143/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG APEGSQFDA+ YDSKM ELL+ E ++FFTSYDEV+ SFD MGL+ENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQYDSKMTELLN-AEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY L++CQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDCQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 269 bits (688), Expect = 4e-72 Identities = 133/152 (87%), Positives = 145/152 (95%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MA +AP+G+QFDA+ YDSKM +LL+ + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MARLAPDGAQFDARQYDSKMNDLLA-ADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 266 bits (680), Expect = 3e-71 Identities = 131/152 (86%), Positives = 144/152 (94%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG APEG+QFDA+ +D K+ E+L +G+ +EFFTSYD+VHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL-EGQ-DEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L++CQALVLAPTRE Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 150
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 263 bits (673), Expect = 2e-70 Identities = 133/152 (87%), Positives = 142/152 (93%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG APEGSQFDA+ +D+KM ELLS + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQFDTKMNELLS-ADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL Y L+ECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTRE 119 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDYLGVKV ACVGGTSVRED Sbjct: 120 LAQQIEKVMRALGDYLGVKVTACVGGTSVRED 151
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 262 bits (670), Expect = 5e-70 Identities = 129/152 (84%), Positives = 139/152 (91%) Frame = +3 Query: 135 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 MAG APEG+QFD + +D ++ E+L +EFFTSYDEVHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVLDG--QDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L++CQALVLAPTRE Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LAQQIEKVMRALGDY GVKVHACVGGTSVRED Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVRED 150
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 168 bits (425), Expect = 1e-41 Identities = 86/141 (60%), Positives = 108/141 (76%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 347 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 348 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 527 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 528 LGDYLGVKVHACVGGTSVRED 590 LGDY+G HAC+GGT+VR + Sbjct: 123 LGDYMGASCHACIGGTNVRAE 143
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 168 bits (425), Expect = 1e-41 Identities = 86/141 (60%), Positives = 108/141 (76%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 347 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 348 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 527 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 528 LGDYLGVKVHACVGGTSVRED 590 LGDY+G HAC+GGT+VR + Sbjct: 123 LGDYMGASCHACIGGTNVRAE 143
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 168 bits (425), Expect = 1e-41 Identities = 86/141 (60%), Positives = 108/141 (76%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 347 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 348 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 527 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 528 LGDYLGVKVHACVGGTSVRED 590 LGDY+G HAC+GGT+VR + Sbjct: 123 LGDYMGASCHACIGGTNVRAE 143
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 167 bits (424), Expect = 2e-41 Identities = 82/119 (68%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 86 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 87 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNE 145
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (424), Expect = 2e-41 Identities = 82/119 (68%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNE 144
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (424), Expect = 2e-41 Identities = 82/119 (68%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNE 144
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (424), Expect = 2e-41 Identities = 82/119 (68%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNE 144
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 167 bits (423), Expect = 2e-41 Identities = 80/119 (67%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 +++ EV+++FDDM L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTA Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTA 82 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQ+D + ECQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRED Sbjct: 83 TFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVRED 141
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 167 bits (422), Expect = 3e-41 Identities = 82/119 (68%), Positives = 98/119 (82%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 17 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 76 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 77 TFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE 135
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 166 bits (421), Expect = 4e-41 Identities = 79/119 (66%), Positives = 99/119 (83%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++YDE +SFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 45 SNYDETVDSFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTA 104 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF +LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D Sbjct: 105 TFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDD 163
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 165 bits (418), Expect = 8e-41 Identities = 82/136 (60%), Positives = 106/136 (77%) Frame = +3 Query: 183 DSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC 362 + K E + +G+ E ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I+P Sbjct: 4 NDKGLEEIPEGQIE---SNYDEITDSFDAMDLKPELLRGVYAYGFERPSAIQQRAILPII 60 Query: 363 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL 542 KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD++ Sbjct: 61 KGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM 120 Query: 543 GVKVHACVGGTSVRED 590 ++ HAC+GGT+VRED Sbjct: 121 NIECHACIGGTNVRED 136
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 165 bits (417), Expect = 1e-40 Identities = 83/138 (60%), Positives = 103/138 (74%) Frame = +3 Query: 177 NYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVP 356 N S++ L T + T+YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I P Sbjct: 24 NVGSRLTRLFQS--TGQIETNYDEITDSFDAMELKPELLRGVYAYGFERPSAIQQRAIKP 81 Query: 357 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD 536 KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD Sbjct: 82 IIKGSDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGD 141 Query: 537 YLGVKVHACVGGTSVRED 590 ++ + HAC+GGT+VRED Sbjct: 142 FMNITCHACIGGTAVRED 159
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 164 bits (415), Expect = 2e-40 Identities = 81/130 (62%), Positives = 101/130 (77%) Frame = +3 Query: 201 LLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVI 380 ++ Q E T+YDEV ++FDDM L+ LLRGIYAYGFE+PSAIQQR I+P DV+ Sbjct: 1 MVDQLEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVL 60 Query: 381 QQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 560 QAQSGTGKTATF +LQ++D L +CQAL+LAPTRELAQQI+KV+ ALGD + V+ HA Sbjct: 61 AQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHA 120 Query: 561 CVGGTSVRED 590 C+GGT VR+D Sbjct: 121 CIGGTLVRDD 130
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 163 bits (413), Expect = 3e-40 Identities = 82/132 (62%), Positives = 99/132 (75%) Frame = +3 Query: 195 QELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 374 +E + T E ++YDE+ E F+ + L+ +LLRGI+AYGFEKPSAIQQRGI P G D Sbjct: 11 EENVQVASTGEIESNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYD 70 Query: 375 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKV 554 I QAQSGTGKTATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ Sbjct: 71 TIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRC 130 Query: 555 HACVGGTSVRED 590 HACVGGTSVR+D Sbjct: 131 HACVGGTSVRDD 142
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 162 bits (411), Expect = 5e-40 Identities = 84/141 (59%), Positives = 106/141 (75%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 347 D+++ D+ + +G E ++++E+ +S DDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 348 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 527 I+ KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 528 LGDYLGVKVHACVGGTSVRED 590 LGDY+G HAC+GGT+VR + Sbjct: 123 LGDYMGASCHACIGGTNVRAE 143
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 162 bits (410), Expect = 7e-40 Identities = 76/119 (63%), Positives = 98/119 (82%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTA 100 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D Sbjct: 101 TFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDD 159
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 161 bits (408), Expect = 1e-39 Identities = 86/157 (54%), Positives = 112/157 (71%) Frame = +3 Query: 120 PDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRG 299 P+ ++ A AP G + N ++ GE E ++++ V ++FD+M L+E LLRG Sbjct: 4 PEDTSAAAAAPAGEAGNNLN--------IADGEIE---SNWETVIDNFDNMELKEELLRG 52 Query: 300 IYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVL 479 +YAYGFE+PSAIQ R IVP KG DVI QAQSGTGKTATF ILQ++D + QAL+L Sbjct: 53 VYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALIL 112 Query: 480 APTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 APTRELAQQI+KV+ ALGDY+ + HAC+GGT+VRED Sbjct: 113 APTRELAQQIQKVVIALGDYMKIDCHACIGGTNVRED 149
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 160 bits (404), Expect = 3e-39 Identities = 81/118 (68%), Positives = 95/118 (80%) Frame = +3 Query: 237 SYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 416 +YD+V ESFDDM L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTAT Sbjct: 23 NYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTAT 82 Query: 417 FCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 F ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+D Sbjct: 83 FSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDD 140
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 159 bits (402), Expect = 6e-39 Identities = 81/119 (68%), Positives = 97/119 (81%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 ++++EV ++FDDM L+ LLRGIYAYGFE+PSAIQQR I+P G D I QAQSGTGKTA Sbjct: 21 SNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTA 80 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRED Sbjct: 81 TFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVRED 139
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 158 bits (400), Expect = 1e-38 Identities = 77/133 (57%), Positives = 101/133 (75%) Frame = +3 Query: 192 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 371 M + L+ ++ + T+YDEV SFDD+GL++ LLRGIY YGFE PS+IQQR I+P KG Sbjct: 1 MADGLTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGN 60 Query: 372 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 551 DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ Sbjct: 61 DVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIE 120 Query: 552 VHACVGGTSVRED 590 HAC+GGTSV ED Sbjct: 121 CHACIGGTSVAED 133
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 155 bits (391), Expect = 1e-37 Identities = 82/131 (62%), Positives = 100/131 (76%), Gaps = 2/131 (1%) Frame = +3 Query: 204 LSQGETEEFFTSYDEVH--ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 377 ++ G+++ F S + V +FD MGL+E+LLRGIYAY FEKPSAIQQR I+P +G DV Sbjct: 5 INAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDV 64 Query: 378 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 557 I QAQSGTGKTATF +LQ +D L E QALVL+PTRELA QI+ V+ ALGDYL V+ H Sbjct: 65 IAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCH 124 Query: 558 ACVGGTSVRED 590 AC+GGTSV ED Sbjct: 125 ACIGGTSVGED 135
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 155 bits (391), Expect = 1e-37 Identities = 79/126 (62%), Positives = 95/126 (75%), Gaps = 1/126 (0%) Frame = +3 Query: 216 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 392 E EF TS + VH +F+ M L+ENLLRGIYAYG+E PSA+Q R IV CKG D I QAQ Sbjct: 13 ERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQ 72 Query: 393 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 SGTGKTATF +LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GG Sbjct: 73 SGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGG 132 Query: 573 TSVRED 590 T+V ED Sbjct: 133 TNVGED 138
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 153 bits (386), Expect = 4e-37 Identities = 81/123 (65%), Positives = 96/123 (78%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146 Query: 582 RED 590 ED Sbjct: 147 GED 149
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 153 bits (386), Expect = 4e-37 Identities = 81/123 (65%), Positives = 96/123 (78%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146 Query: 582 RED 590 ED Sbjct: 147 GED 149
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 152 bits (384), Expect = 7e-37 Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 13 EFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 72 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF GILQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 73 GKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 132 Query: 582 RED 590 ED Sbjct: 133 GED 135
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 152 bits (383), Expect = 9e-37 Identities = 77/126 (61%), Positives = 95/126 (75%), Gaps = 1/126 (0%) Frame = +3 Query: 216 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 392 E +F TS + VH +F+ M L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQ Sbjct: 12 EKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQ 71 Query: 393 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 SGTGKTATF +LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GG Sbjct: 72 SGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGG 131 Query: 573 TSVRED 590 T+V ED Sbjct: 132 TNVGED 137
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 150 bits (379), Expect = 3e-36 Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 1/126 (0%) Frame = +3 Query: 216 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 392 E E TS D SF++M L+E+LLRGIYAYG+E PSA+Q R I+ CKG DVI QAQ Sbjct: 7 ENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66 Query: 393 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 SGTGKTATF GILQ +D + + QAL+L+PTRELA QI+ V+ ALGD++ V+ HAC+GG Sbjct: 67 SGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGG 126 Query: 573 TSVRED 590 TSV D Sbjct: 127 TSVGND 132
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 149 bits (377), Expect = 5e-36 Identities = 77/123 (62%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 13 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 72 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF ILQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 73 GKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 132 Query: 582 RED 590 ED Sbjct: 133 GED 135
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 149 bits (377), Expect = 5e-36 Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF +LQ LD + E QAL+LAP RELA QI+K + LGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNV 146 Query: 582 RED 590 ED Sbjct: 147 GED 149
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 149 bits (375), Expect = 8e-36 Identities = 74/129 (57%), Positives = 95/129 (73%) Frame = +3 Query: 204 LSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQ 383 ++Q + + T+YD+V FDDM L E LLRG++ YGF KPSAIQQR I+P +G DV+ Sbjct: 6 MTQLDESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLA 65 Query: 384 QAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC 563 QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ ALG ++ +KVHAC Sbjct: 66 QAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHAC 125 Query: 564 VGGTSVRED 590 +GGTS ED Sbjct: 126 IGGTSFVED 134
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 149 bits (375), Expect = 8e-36 Identities = 75/114 (65%), Positives = 89/114 (78%) Frame = +3 Query: 249 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 428 V +F+ + L+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF Sbjct: 21 VAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSIS 80 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +LQ +D L E QALVL+PTRELA QI+ V+ ALGDY+ V HAC+GGTSV ED Sbjct: 81 MLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHACIGGTSVGED 134
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 148 bits (373), Expect = 1e-35 Identities = 74/125 (59%), Positives = 93/125 (74%) Frame = +3 Query: 216 ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 395 E + T+YD+V FDDM L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQS Sbjct: 8 EESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQS 67 Query: 396 GTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 575 GTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGT Sbjct: 68 GTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGT 127 Query: 576 SVRED 590 S ED Sbjct: 128 SFVED 132
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 147 bits (372), Expect = 2e-35 Identities = 76/123 (61%), Positives = 93/123 (75%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 14 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 73 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 74 GKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 133 Query: 582 RED 590 ED Sbjct: 134 GED 136
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 147 bits (371), Expect = 2e-35 Identities = 74/133 (55%), Positives = 95/133 (71%) Frame = +3 Query: 192 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 371 M + ++ E E T+YD++ FD++ L+E LLRGIY YGF PSAIQQR I+P +G Sbjct: 1 MSDSITNPENSEIQTNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGH 60 Query: 372 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 551 DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VK Sbjct: 61 DVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVK 120 Query: 552 VHACVGGTSVRED 590 VHAC+GGT RED Sbjct: 121 VHACIGGTDPRED 133
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 144 bits (362), Expect = 2e-34 Identities = 72/133 (54%), Positives = 97/133 (72%) Frame = +3 Query: 192 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 371 M + ++ + + ++YD+V SFDD+ L+E LLRGI+ YGF +PSAIQQR I+P +G Sbjct: 1 MSDGITDIDENQIQSTYDKVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGK 60 Query: 372 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 551 DV+ QAQSGTGKT TF LQ +D + Q L+LAPTRELA QI+KV+ AL ++ VK Sbjct: 61 DVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVK 120 Query: 552 VHACVGGTSVRED 590 VHAC+GGTS++ED Sbjct: 121 VHACIGGTSLQED 133
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 142 bits (358), Expect = 7e-34 Identities = 68/115 (59%), Positives = 86/115 (74%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 +VH +F+ M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSI 82 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G+L+ +D +CQAL+L+PTRELAQQI+ V++ LGDY+ V HAC+GGT V ED Sbjct: 83 GMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGED 137
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 140 bits (353), Expect = 3e-33 Identities = 67/115 (58%), Positives = 86/115 (74%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 +VH +F+ M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSI 82 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G+L+ +D ECQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V ED Sbjct: 83 GMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGED 137
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 139 bits (351), Expect = 5e-33 Identities = 68/119 (57%), Positives = 89/119 (74%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 T+YD V +FDD+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA Sbjct: 16 TNYDNVVYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF LQ++D QAL+LAPTRELA QI+ V+ +G YL V VHA +GGTS+++D Sbjct: 76 TFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDD 134
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 138 bits (348), Expect = 1e-32 Identities = 73/123 (59%), Positives = 90/123 (73%), Gaps = 1/123 (0%) Frame = +3 Query: 225 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 401 EF TS D +V +F+ M L+++LLRGIYAYGFE PSAIQ R I KG D I QAQSGT Sbjct: 13 EFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGT 72 Query: 402 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 GKTATF +L+ +D E QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ Sbjct: 73 GKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSL 132 Query: 582 RED 590 D Sbjct: 133 SVD 135
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 137 bits (344), Expect = 3e-32 Identities = 66/111 (59%), Positives = 84/111 (75%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF +MG++++LLRG+Y YGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q Sbjct: 19 SFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQ 78 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +D E QAL+L+PTRELA Q EKV+ A+GDY+ V+ HAC+GG SV ED Sbjct: 79 IVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGED 129
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 136 bits (343), Expect = 4e-32 Identities = 68/119 (57%), Positives = 88/119 (73%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 T+YD V FDD+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 TF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDD 134
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 135 bits (339), Expect = 1e-31 Identities = 69/114 (60%), Positives = 83/114 (72%) Frame = +3 Query: 249 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 428 V +F+ M LQENLLRGIY YGFE PSAIQ R I +G DVI QAQSGTGKTATF G Sbjct: 21 VSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIG 80 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +LQ +D + QALVL+PTRELA QI +V+R LGDY+ V AC GG ++++D Sbjct: 81 MLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQD 134
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 130 bits (327), Expect = 3e-30 Identities = 66/115 (57%), Positives = 83/115 (72%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 ++ +F+ M L+E LLRGIY+YGFE PSAIQ R I G DVI QAQSGTGKTATF Sbjct: 20 KISATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G+LQ +D + QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++++D Sbjct: 80 GMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDD 134
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 130 bits (327), Expect = 3e-30 Identities = 67/115 (58%), Positives = 81/115 (70%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 +V +F+ M L+ +LLRGIY YGFE PS+IQ R I G DVI QAQSGTGKTATF Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTI 79 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G+LQ +D E QALVL+PTRELA Q E V+ LGDYL V HAC GG ++++D Sbjct: 80 GLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQD 134
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 127 bits (319), Expect = 2e-29 Identities = 66/114 (57%), Positives = 82/114 (71%), Gaps = 3/114 (2%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SFDDM L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQ 86 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVRED 590 +LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++D Sbjct: 87 RLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDD 140
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 127 bits (318), Expect = 3e-29 Identities = 62/115 (53%), Positives = 83/115 (72%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 +V +F+ M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G+LQ +D + QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D Sbjct: 80 GLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDD 134
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 100 bits (249), Expect = 3e-21 Identities = 52/112 (46%), Positives = 73/112 (65%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +SF+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F L Sbjct: 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL 89 Query: 435 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 Q + L + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDD 141
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 99.0 bits (245), Expect = 9e-21 Identities = 50/110 (45%), Positives = 72/110 (65%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D L+ LL GI+ GFE PS IQ+ I G D++ +A++GTGKTA F LQQ Sbjct: 30 FEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQ 89 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ + + QAL++ PTRELA Q +V + LG +LG+KV GGT++R+D Sbjct: 90 VNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGIKVMVTTGGTNLRDD 139
>DHH1_KLULA (Q6CSZ7) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 514 Score = 97.4 bits (241), Expect = 3e-20 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 4/149 (2%) Frame = +3 Query: 156 GSQFDAKNYDSKMQELLSQGETEEFFTSYDEV----HESFDDMGLQENLLRGIYAYGFEK 323 GS N D K Q + + +T D+V SF+D L+ LL GI+ GFEK Sbjct: 2 GSDTSESNNDWKTQLNIPKKDTRP---QTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEK 58 Query: 324 PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQ 503 PS IQ+ I G D++ +A++GTGKTA F L+++ L + QAL++ PTRELA Sbjct: 59 PSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELAL 118 Query: 504 QIEKVMRALGDYLGVKVHACVGGTSVRED 590 Q +V+R LG + G+ GGT++R+D Sbjct: 119 QTSQVVRTLGKHCGISCMVTTGGTNLRDD 147
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 97.1 bits (240), Expect = 3e-20 Identities = 47/110 (42%), Positives = 71/110 (64%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F++ L+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLER 103 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+D Sbjct: 104 INPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDD 153
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 97.1 bits (240), Expect = 3e-20 Identities = 50/111 (45%), Positives = 71/111 (63%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ Sbjct: 32 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 91 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ L + QAL++ PTRELA Q +V+R LG + GV GGT++R+D Sbjct: 92 KIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDD 142
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 95.5 bits (236), Expect = 1e-19 Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L + Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 ++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+D Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDD 148
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 95.5 bits (236), Expect = 1e-19 Identities = 48/111 (43%), Positives = 71/111 (63%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ L + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDD 157
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 95.5 bits (236), Expect = 1e-19 Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L + Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 ++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+D Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDD 148
>DHH1_SCHPO (Q09181) Putative ATP-dependent RNA helicase ste13 (EC 3.6.1.-)| Length = 485 Score = 94.7 bits (234), Expect = 2e-19 Identities = 48/110 (43%), Positives = 70/110 (63%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +D + Q L+L PTRELA Q +V + LG ++ VKV GGT++R+D Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDD 155
>DHH1_ASPFU (Q4WWD3) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 507 Score = 92.8 bits (229), Expect = 7e-19 Identities = 46/110 (41%), Positives = 69/110 (62%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ + QAL+L PTRELA Q +V + LG +LG+ V GGT + +D Sbjct: 109 INPKSTKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLMDD 158
>DHH1_ASPOR (Q2U5A2) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 511 Score = 92.0 bits (227), Expect = 1e-18 Identities = 46/110 (41%), Positives = 68/110 (61%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ + QAL+L PTRELA Q V + LG +LG+ V GGT + +D Sbjct: 109 INPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDD 158
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 91.7 bits (226), Expect = 1e-18 Identities = 56/147 (38%), Positives = 80/147 (54%) Frame = +3 Query: 147 APEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKP 326 A E S D + S ++ S + EE +E+ ESF ++ L L+ + KP Sbjct: 35 ANEPSPSDEDSAQSNSKDSNSNEQPEES----EEIFESFTELDLVPELIEACKNLNYNKP 90 Query: 327 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQ 506 + IQ + I P KG D+I AQ+G+GKTA F IL QL + A +LAPTRELAQQ Sbjct: 91 TPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLWHDQQPYYACILAPTRELAQQ 150 Query: 507 IEKVMRALGDYLGVKVHACVGGTSVRE 587 I++ +LG +GV+ VGG S+ + Sbjct: 151 IKETFDSLGSLMGVRSTCIVGGMSMMD 177
>DHH1_NEUCR (Q7S5D9) ATP-dependent RNA helicase dhh-1 (EC 3.6.1.-)| Length = 569 Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/110 (41%), Positives = 68/110 (61%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 ++D +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L + Sbjct: 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK 106 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+D Sbjct: 107 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDD 156
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 89.4 bits (220), Expect = 7e-18 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+ +GL ENLL+GIYA ++KPS IQ++ + + ++I Q+QSGTGKTA F Sbjct: 64 KSFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILT 123 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 566 +L ++DY L + QA+ LAP+RELA+QI V R + + V C+ Sbjct: 124 MLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCL 169
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 88.2 bits (217), Expect = 2e-17 Identities = 45/111 (40%), Positives = 69/111 (62%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F+D L+ LL GI+ GFE+PS IQ+ I D++ +A++GTGKTA F L+ Sbjct: 30 TFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLE 89 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 + + + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D Sbjct: 90 IVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDD 140
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 88.2 bits (217), Expect = 2e-17 Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Frame = +3 Query: 141 GMAPEGSQFDAKNYDSKMQELLSQG--ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 314 G + S+ DA K+ + S+ T+ T+ DE ESF ++ L L++ Sbjct: 41 GGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLN 100 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 + KP+ IQ + I P +G D+I AQ+G+GKTA F IL +L + A +LAPTRE Sbjct: 101 YSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRE 160 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 LAQQI++ +LG +GV+ VGG ++ + Sbjct: 161 LAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
>ME31_DROME (P23128) Putative ATP-dependent RNA helicase me31b (EC 3.6.1.-)| (Maternal expression at 31B) Length = 459 Score = 87.4 bits (215), Expect = 3e-17 Identities = 44/110 (40%), Positives = 68/110 (61%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F++ L+ LL GI+ G+E+PS IQ+ I G DV+ +A++GTGKT +C +L+Q Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 119 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +D QALV+ PTRELA Q ++ L +L ++V GGT +++D Sbjct: 120 IDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDD 169
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 85.9 bits (211), Expect = 8e-17 Identities = 45/111 (40%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT + +L++ Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKTGAYLIPLLER 156 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+D Sbjct: 157 LDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD 207
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 85.9 bits (211), Expect = 8e-17 Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++ Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+D Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD 208
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 85.9 bits (211), Expect = 8e-17 Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++ Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+D Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDD 208
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 82.8 bits (203), Expect = 7e-16 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 7/156 (4%) Frame = +3 Query: 144 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 305 MA + + D +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 306 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 485 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH 120 Query: 486 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 TRELA QI K Y+ VKV GG S+++D Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 82.8 bits (203), Expect = 7e-16 Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Frame = +3 Query: 210 QGETEEFFTSYDEV-HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 386 Q + E+ +EV ESF + L L++ F KP+ IQ R I P G DVI Sbjct: 57 QAKDEKVEEPEEEVTFESFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGL 116 Query: 387 AQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 566 AQ+G+GKTA F IL +L A VLAPTRELAQQI++ +LG +GV+ V Sbjct: 117 AQTGSGKTAAFAIPILNKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIV 176 Query: 567 GGTSVRE 587 GG ++ + Sbjct: 177 GGMNMMD 183
>DDX20_HUMAN (Q9UHI6) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) Length = 824 Score = 82.8 bits (203), Expect = 7e-16 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+ + L +L G+ A GFE+PS +Q + I GLD+I QA+SGTGKT F + L Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 L + Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQD 174
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 82.4 bits (202), Expect = 9e-16 Identities = 48/107 (44%), Positives = 64/107 (59%) Frame = +3 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 +++F D+G+ L R + GF+KPS IQ I +G D+I AQ+G+GKTA F I Sbjct: 37 NKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPI 96 Query: 432 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 LQ L ALVLAPTRELA QI + + +LG +GV+ VGG Sbjct: 97 LQTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGG 143
>DDX20_MOUSE (Q9JJY4) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) (Regulator of steroidogenic factor 1) (ROSF-1) Length = 825 Score = 82.0 bits (201), Expect = 1e-15 Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 1/111 (0%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+ + L +L G+ A GFE+PS +Q + I GLD+I QA+SGTGKT F + L Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQD 175
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 81.6 bits (200), Expect = 2e-15 Identities = 45/115 (39%), Positives = 66/115 (57%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 +E SF ++ L L+ F KP+ IQ + I P +G D+I AQ+G+GKTA F Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFA 121 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 IL +L + A +LAPTRELAQQI++ +LG +GV+ VGG ++ + Sbjct: 122 IPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMD 176
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 2e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 2e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 2e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 2e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 81.3 bits (199), Expect = 2e-15 Identities = 57/149 (38%), Positives = 74/149 (49%), Gaps = 2/149 (1%) Frame = +3 Query: 150 PEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKP 326 P + N D+K + + E E SY +H + F D L+ LLR I GFE P Sbjct: 21 PSTTVESGSNGDAKAETTTVKEENTEQKGSYVGIHSTGFRDFLLKPELLRAIVDCGFEHP 80 Query: 327 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQ 506 S +QQ I G DV+ QA++G GKTA F LQQL+ EC +VL TRELA Q Sbjct: 81 SEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTLQQLEPVPGECSVVVLCHTRELAYQ 140 Query: 507 IEKVMRALGDYL-GVKVHACVGGTSVRED 590 I YL VK GG+ +++D Sbjct: 141 IMNEYARFSKYLPDVKTAVFYGGSPIQKD 169
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 7/156 (4%) Frame = +3 Query: 144 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 305 MA + + + +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 306 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 485 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCH 120 Query: 486 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 TRELA QI K Y+ VKV GG S+++D Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
>UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_PONPY (Q5RE47) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_PIG (Q29024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_PANTR (P60024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_MOUSE (Q9Z1N5) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (HLA-B-associated transcript 1) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_MACMU (Q5TM17) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_HUMAN (Q13838) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (HLA-B-associated transcript-1) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>UAP56_CANFA (Q5WR10) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.9 bits (198), Expect = 3e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
>DBP5_EMENI (Q5AVM1) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 477 Score = 80.9 bits (198), Expect = 3e-15 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 7/103 (6%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCS 425 ++F+D+GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F Sbjct: 69 KNFEDLGLDPRILQGLSAMNFRKPSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVL 127 Query: 426 GILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL 542 IL +LD + QAL+LAPTRELA+QI V++ +G +L Sbjct: 128 NILSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFL 170
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 80.5 bits (197), Expect = 3e-15 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 7/156 (4%) Frame = +3 Query: 144 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 305 MA + + + +YD + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 306 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 485 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCH 120 Query: 486 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 TRELA QI K Y+ VKV GG S+++D Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD 156
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 80.5 bits (197), Expect = 3e-15 Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF ++ L E+L++GI A GF+KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 148 QSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLN 207 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 575 +L ++D + QA+ +AP+RELA+QI++V+ +G + V + G+ Sbjct: 208 MLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>DBP5_GIBZE (Q4HY71) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 80.1 bits (196), Expect = 4e-15 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 11/175 (6%) Frame = +3 Query: 93 PSGDPRHLLPDASAMAGMAPE------GSQFDAKNYDSKMQ-ELLSQGETEEFFTSYDEV 251 P+ P P AS G A GS +D ++ L E F ++ Sbjct: 19 PAETPAETAPAASGELGQADGNIEDLGGSGLQEPEWDVEVSLSELQNNEATPFHSA---- 74 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCS 425 ++ D+GL+E+LL+G+ + F KPS +Q + + +++ Q+QSGTGKTA F + Sbjct: 75 -TTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQSQSGTGKTAAFVT 133 Query: 426 GILQQLDYGLVEC-QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVR 584 IL ++D+ + QAL LAP+RELA+QIE V+ A+G ++ KV A + G R Sbjct: 134 AILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAAAIPGVLPR 188
>DBP5_ASPOR (Q2U8K6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 487 Score = 80.1 bits (196), Expect = 4e-15 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 7/111 (6%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+D+GL +L+G+ A F KPS IQ+R + +++ Q+QSGTGKTA F Sbjct: 78 KSFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLN 137 Query: 429 ILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 566 L +LD + QAL+LAPTRELA+QI V++ +G +L G+ V V Sbjct: 138 ALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAV 188
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 80.1 bits (196), Expect = 4e-15 Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 2/106 (1%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SFD++GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F Sbjct: 114 KSFDELGLSPELLKGIYAMKFQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSLT 173 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 566 +L ++D QA+ LAP+RELA+Q +V++ +G Y + V Sbjct: 174 MLSRVDETQNVPQAICLAPSRELARQTLEVIQEMGKYTKITTQLIV 219
>UAP56_CHICK (Q5ZHZ0) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 80.1 bits (196), Expect = 4e-15 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQL+ + LV+ TRELA QI K Y+ VKV GG +V++D Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKD 157
>DBP5_SCHPO (Q09747) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 503 Score = 79.7 bits (195), Expect = 6e-15 Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 2/101 (1%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++ L+ LL+GIY+ F+KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 114 KSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALT 173 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 551 +L ++D + + QA+ LAP+RELA+QI V+ +G Y VK Sbjct: 174 MLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK 214
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 79.3 bits (194), Expect = 8e-15 Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 6/114 (5%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SFD +GL ++LR + G+ +P+ IQQ+ I +G D++ AQ+GTGKTA F +LQ Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 Query: 438 QL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 L G +AL+L PTRELA QI + +R YL ++ GG S+ Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 79.3 bits (194), Expect = 8e-15 Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 4/159 (2%) Frame = +3 Query: 123 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHE----SFDDMGLQENL 290 DA A+A E + +A ++ + + E F T D E SF+++ L L Sbjct: 21 DARALA----EKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNELKLIPEL 76 Query: 291 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA 470 L I F KP+ IQ I +G D+I AQ+G+GKTA F ILQ L Sbjct: 77 LEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWEAQAAYYG 136 Query: 471 LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 LVLAPTRELA QI++ ALG +G++ VGG + + Sbjct: 137 LVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMD 175
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 78.6 bits (192), Expect = 1e-14 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 14/161 (8%) Frame = +3 Query: 147 APEGSQFDAKNYDSKMQELLSQGETEEFFTSY----------DEVHESFDDMGLQENLLR 296 A E + D + + +E + EE Y + VH +F+ + L +L+ Sbjct: 173 AEEAVELDGVEFGDEQEEAREEDTAEEMAQFYAPSNEGEEAKNVVHSTFNSLSLSRPVLK 232 Query: 297 GIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQ 467 G+ A G+ KPS IQ I G DVI A +G+GKTA F I+++L Y + + Sbjct: 233 GLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTR 292 Query: 468 ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 LVL PTRELA Q+ V + LG ++ G+ VGG ++R+ Sbjct: 293 VLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQ 333
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 78.6 bits (192), Expect = 1e-14 Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSL 61 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 +L +D L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGG 111
>UAP56_CAEEL (Q18212) Spliceosome RNA helicase BAT1 homolog (EC 3.6.1.-) (DEAD| box protein UAP56) Length = 425 Score = 78.6 bits (192), Expect = 1e-14 Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 8/146 (5%) Frame = +3 Query: 177 NYDSKMQELLSQ------GETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 335 +Y+ + +E+ + G+ + +Y +H S F D L+ +LR I GFE PS + Sbjct: 8 DYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEV 67 Query: 336 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEK 515 Q I G+DV+ QA+SG GKTA F LQQL+ E + + TRELA QI K Sbjct: 68 QHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127 Query: 516 VMRALGDYL-GVKVHACVGGTSVRED 590 YL GVKV GG ++++D Sbjct: 128 EYERFSKYLPGVKVAVFFGGMAIKKD 153
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 78.2 bits (191), Expect = 2e-14 Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSG 428 +SF+++GL E LL+G+YA F+KPS IQ++ + + ++I Q+QSGTGKTA F Sbjct: 79 KSFEELGLSEELLKGLYAMKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLT 138 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L ++D + QA+ L+P RELA+Q +V++ +G + Sbjct: 139 MLTRVDPNVNSTQAICLSPARELARQTLEVIQEMGKF 175
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 77.8 bits (190), Expect = 2e-14 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Frame = +3 Query: 177 NYDSKMQELLSQGET-EEFFTSYDEVH--ESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 347 N DS+ + + S+G +E TS +E +SF ++G+ + L G++ P+ IQ + Sbjct: 17 NSDSEAESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQA 76 Query: 348 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 527 I +G DVI A++G+GKTA F +LQ L LVLAPTRELA QI + Sbjct: 77 IPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFET 136 Query: 528 LGDYLGVKVHACVGG 572 LG +GV+ VGG Sbjct: 137 LGSTIGVRCAVIVGG 151
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 77.8 bits (190), Expect = 2e-14 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Frame = +3 Query: 186 SKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 365 +K ++G+ E+ + H SF M L +L+G+ GFE P+ IQ + I Sbjct: 238 AKKNAFFAEGDKEKSMMT--TTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALL 295 Query: 366 GLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGD 536 G D++ A +G+GKTA F IL++L Y + + L+L PTRELA Q V + Sbjct: 296 GKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIAS 355 Query: 537 YLGVKVHACVGGTSVR 584 + + V C+GG S++ Sbjct: 356 FTDIMVCLCIGGLSLK 371
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 77.4 bits (189), Expect = 3e-14 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSGIL 434 F+D+GL ENLL+G+YA F KPS IQ++ + ++I Q+QSGTGKT F +L Sbjct: 101 FEDLGLDENLLKGLYAMKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTML 160 Query: 435 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 ++D L Q + LAP+RELA+Q V+ + + + H V ++ R Sbjct: 161 SRVDPNLKAVQCICLAPSRELARQTLDVVDEMKKFTDITTHLIVPESTER 210
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 77.4 bits (189), Expect = 3e-14 Identities = 46/109 (42%), Positives = 66/109 (60%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+++ L +LL I GF + S IQ++ I +G DVI QAQ+GTGKTA F L++ Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + QALV+APTRELA Q ++ + G GVKV + GG+S+ + Sbjct: 63 IRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEK 111
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 77.4 bits (189), Expect = 3e-14 Identities = 46/109 (42%), Positives = 66/109 (60%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+++ L +LL I GF + S IQ++ I +G DVI QAQ+GTGKTA F L++ Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + QALV+APTRELA Q ++ + G GVKV + GG+S+ + Sbjct: 63 IRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEK 111
>DBP5_NEUCR (Q8X0X2) ATP-dependent RNA helicase dbp-5 (EC 3.6.1.-)| Length = 483 Score = 77.0 bits (188), Expect = 4e-14 Identities = 46/114 (40%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 431 SFD++GL E + RG+ A F+KPS +Q++ + ++I Q+QSGTGKTA F + Sbjct: 75 SFDELGLPEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVLTV 134 Query: 432 LQQLDYGLV-ECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 L ++D + QAL+LAP+RELA+QI+ V++ +G + + V A + G RE Sbjct: 135 LSRIDLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEAAIPGAISRE 188
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 77.0 bits (188), Expect = 4e-14 Identities = 59/157 (37%), Positives = 76/157 (48%), Gaps = 2/157 (1%) Frame = +3 Query: 126 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGI 302 A+ A A G+Q K +L G + SY +H + F D L+ LLR I Sbjct: 21 AATTAAPAANGAQ-------DKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAI 73 Query: 303 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLA 482 GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ EC LV+ Sbjct: 74 TDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMC 133 Query: 483 PTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 TRELA QI+ YL VK GGT +++D Sbjct: 134 HTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKD 170
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 76.6 bits (187), Expect = 5e-14 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 15/158 (9%) Frame = +3 Query: 153 EGSQFDAKNYDSKMQELL----SQGETEE------FFTSYD-----EVHESFDDMGLQEN 287 E S ++++ D+ QE+L S E EE +TS + E ++F D+G+ ++ Sbjct: 15 EESGSESEDNDAIAQEILDTTKSDNEEEEPKKSSKNYTSVEVDESEEQTKTFKDLGVIDS 74 Query: 288 LLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ 467 + F KP+ IQ + I +G D+I AQ+G+GKTA F +LQ L Sbjct: 75 ICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENPQPLY 134 Query: 468 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 +VLAPTRELA QI + ALG +G++ VGG ++ Sbjct: 135 CVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNM 172
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 76.6 bits (187), Expect = 5e-14 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 3/156 (1%) Frame = +3 Query: 126 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIY 305 +SA + + K+ K ++ G E + YDE + SF DM L LL+ I Sbjct: 176 SSADENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDE-NLSFQDMNLSRPLLKAIT 234 Query: 306 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVEC---QALV 476 A GF++P+ IQ+ I G D+ A +GTGKTA F +L++L Y + + LV Sbjct: 235 AMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLV 294 Query: 477 LAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 L PTREL Q+ V R L + + VGG V+ Sbjct: 295 LVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVK 330
>SUB2_ASPOR (Q2U6P7) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 441 Score = 76.6 bits (187), Expect = 5e-14 Identities = 60/160 (37%), Positives = 77/160 (48%), Gaps = 2/160 (1%) Frame = +3 Query: 117 LPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLL 293 L A A A + DA +K +L G + SY +H + F D L+ LL Sbjct: 15 LQTTDAAATTAAPAANGDA----AKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELL 70 Query: 294 RGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQAL 473 R I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ EC L Sbjct: 71 RAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVL 130 Query: 474 VLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 V+ TRELA QI+ YL VK GGT +++D Sbjct: 131 VMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKD 170
>SUB2_EMENI (Q5ASK8) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 451 Score = 75.9 bits (185), Expect = 8e-14 Identities = 54/133 (40%), Positives = 68/133 (51%), Gaps = 2/133 (1%) Frame = +3 Query: 198 ELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 374 EL G + SY +H + F D L+ LLR I GFE PS +QQ I +D Sbjct: 39 ELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVD 98 Query: 375 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVK 551 V+ QA+SG GKTA F L QL+ EC LV+ TRELA QI+ YL VK Sbjct: 99 VLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVK 158 Query: 552 VHACVGGTSVRED 590 GGT +++D Sbjct: 159 TAVFYGGTPIQKD 171
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 75.9 bits (185), Expect = 8e-14 Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 20/169 (11%) Frame = +3 Query: 138 AGMAPEGSQFDAKNYDSKMQELLSQGETEE---------------FFTSYDEVHES--FD 266 AG E S+ D Y S+ +E+L++ +T + FF E +S F Sbjct: 131 AGSKDEDSETD---YSSEDEEILTKADTLKVKEKKKKKKGQAAGGFFEDASEYDKSLSFQ 187 Query: 267 DMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 446 DM L LL+ I A GF++P+ IQ+ I G D+ A +GTGKTA F +L++L Sbjct: 188 DMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLI 247 Query: 447 Y---GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 Y + LVL PTREL Q+ V + L + + VGG V+ Sbjct: 248 YKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVK 296
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 75.9 bits (185), Expect = 8e-14 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SFD++GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L +++ QA+ LAP+RELA+Q +V++ +G + Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF 188
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 75.9 bits (185), Expect = 8e-14 Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F MGL + LLR I+ GF+ P+ IQ++ I +G DV+ A++G+GKTA F +++ Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIE 129 Query: 438 QLDYGLV--ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L L +AL+L+P RELA Q KV++ ++ A VGG S+ E Sbjct: 130 HLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEE 181
>DBP5_CANAL (Q5AJD0) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 540 Score = 75.5 bits (184), Expect = 1e-13 Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 150 KSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLT 209 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 566 +L ++D + Q L L+PTRELA+Q +V+ +G + + V Sbjct: 210 MLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVV 255
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 75.5 bits (184), Expect = 1e-13 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F+D+GL E +L+ + GFE PS IQQ I G DV+ AQ+G+GKTA F +L Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 Q+D Q LV+APTRELA Q+ Y G ++ GG Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGG 111
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 75.5 bits (184), Expect = 1e-13 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 44 SYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTA 103 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQLD E LV+ TRELA QI Y+ VK GGT + D Sbjct: 104 VFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPITRD 163
>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 438 Score = 75.1 bits (183), Expect = 1e-13 Identities = 51/120 (42%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 47 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 106 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQLD E +VL RELA QI Y+ VK GGT R+D Sbjct: 107 VFVLSTLQQLDPVPGEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKD 166
>DBP5_ASPFU (Q4WIN6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 511 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/111 (38%), Positives = 69/111 (62%), Gaps = 7/111 (6%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 ++F+D+GL +L+G+ + F KPS IQ+R + +++ Q+QSGTGKTA F Sbjct: 99 KNFEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLN 158 Query: 429 ILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 566 L ++D + QAL+LAPTRELA+QI V++ +G ++ G+ + A V Sbjct: 159 ALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAV 209
>UAP56_DROME (Q27268) ATP-dependent RNA helicase WM6 (EC 3.6.1.-) (DEAD box| protein UAP56) (HEL/UAP56) Length = 424 Score = 74.7 bits (182), Expect = 2e-13 Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 3/121 (2%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 +Y +H S F D L+ +LR I GFE PS +Q I G+D++ QA+SG GKTA Sbjct: 34 TYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 93 Query: 414 TFCSGILQQLD-YGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 F LQQL+ C LV+ TRELA QI K Y+ VKV GG ++++ Sbjct: 94 VFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK 153 Query: 588 D 590 D Sbjct: 154 D 154
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 74.7 bits (182), Expect = 2e-13 Identities = 46/137 (33%), Positives = 72/137 (52%) Frame = +3 Query: 162 QFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQ 341 + + N S+ + G+++ +E ++F ++G+ + L GF+ P+ IQQ Sbjct: 20 KIETSNSSSEKSSENNNGDSQN-----NEAPKTFKELGVIDELCEACEKLGFKTPTPIQQ 74 Query: 342 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVM 521 I DVI AQ+G+GKTA F ++Q+L A+VLAPTRELA QI + Sbjct: 75 EAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQF 134 Query: 522 RALGDYLGVKVHACVGG 572 A+G +GV+ VGG Sbjct: 135 EAIGGSIGVRSVVIVGG 151
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 74.7 bits (182), Expect = 2e-13 Identities = 52/128 (40%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Frame = +3 Query: 213 GETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 389 GE + SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA Sbjct: 36 GEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQA 95 Query: 390 QSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 566 +SG GKTA F LQQ++ E LVL TRELA QI+ YL V+ Sbjct: 96 KSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFY 155 Query: 567 GGTSVRED 590 GG ++++D Sbjct: 156 GGINIKQD 163
>SUB2_KLULA (Q6CM95) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 437 Score = 74.7 bits (182), Expect = 2e-13 Identities = 52/130 (40%), Positives = 63/130 (48%), Gaps = 2/130 (1%) Frame = +3 Query: 207 SQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQ 383 SQ + + SY +H + F D L+ L R I GFE PS +QQ I G DV+ Sbjct: 36 SQAKDSDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLC 95 Query: 384 QAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHA 560 QA+SG GKTA F LQQLD E +VL RELA QI Y+ VK Sbjct: 96 QAKSGLGKTAVFVLSTLQQLDPVQGEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAV 155 Query: 561 CVGGTSVRED 590 GGT + D Sbjct: 156 FYGGTEYKND 165
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 73.9 bits (180), Expect = 3e-13 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F D+ + +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTS 578 ++D QALVL PTRELA Q+ + G YL + V GG+S Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 73.9 bits (180), Expect = 3e-13 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 3/149 (2%) Frame = +3 Query: 135 MAGMAPE-GSQFDAKNYDSKMQELLSQGETEEFFTSYDE--VHESFDDMGLQENLLRGIY 305 +A APE GS ++ + + + ET++ T+ + +SF D+G+ + L Sbjct: 9 IAHEAPEHGSDTESTSSHKSVAQQDDPLETQDEATATESRPAPKSFKDLGIIDQLCEACE 68 Query: 306 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 485 G++ P+ IQ I +G D+I A++G+GKTA F ILQ L L+LAP Sbjct: 69 TMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENPQSFFGLILAP 128 Query: 486 TRELAQQIEKVMRALGDYLGVKVHACVGG 572 TRELA QI K +LG + V+ VGG Sbjct: 129 TRELAFQISKSFESLGSTINVRCAVIVGG 157
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 73.6 bits (179), Expect = 4e-13 Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 11/151 (7%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFT-------SYDEVHESFDDMGLQENLLRGIYAYGFEKP 326 DA + + K++E ++ E + F+ + EVH++F+D+ L +++G+ G+ KP Sbjct: 171 DAGDAEEKVEEDTAE-EMQAFYAPESESENAKKEVHKTFNDLALSRPVMKGLSNLGYVKP 229 Query: 327 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTREL 497 S IQ I G D+I A +G+GKTA F I+++L Y + + +VL PTREL Sbjct: 230 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKVASTRVIVLTPTREL 289 Query: 498 AQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 A Q+ V + +G ++ + VGG ++R+ Sbjct: 290 AIQVADVGKKIGQFVSNLTFGLAVGGLNLRQ 320
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 73.6 bits (179), Expect = 4e-13 Identities = 50/156 (32%), Positives = 76/156 (48%) Frame = +3 Query: 105 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQE 284 PR+ P A A D ++ + L + EE T+ D ++F D+G+ + Sbjct: 14 PRNTKPVAQEKPARAEPKPSSDEESEEESAT--LEEPSAEE--TAVDAPKKTFKDLGVND 69 Query: 285 NLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVEC 464 L ++ P+ IQ++ I +G D+I A++G+GKTA F +LQ L Sbjct: 70 ALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKPQPL 129 Query: 465 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 LVLAPTRELA QI + ALG + ++ VGG Sbjct: 130 FGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGG 165
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 73.6 bits (179), Expect = 4e-13 Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 4/148 (2%) Frame = +3 Query: 153 EGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSA 332 +G D D+ + EE + VH++F + L +++GI A G++ P+ Sbjct: 218 KGPAIDEGPQDTAEEMAAFYAPEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTP 277 Query: 333 IQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQ 503 IQ R I G D++ A +G+GKTA + +L++L Y + + +VL PTREL+ Sbjct: 278 IQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATKVVVLTPTRELSI 337 Query: 504 QIEKVMRALGDYL-GVKVHACVGGTSVR 584 Q+ V + L Y+ GV+ VGG ++R Sbjct: 338 QVADVGKKLAQYVSGVRFGLAVGGLNLR 365
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 73.2 bits (178), Expect = 5e-13 Identities = 44/106 (41%), Positives = 59/106 (55%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +SF ++GL E L + G++ P+AIQ I +G D+I A++G+GKTA F IL Sbjct: 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111 Query: 435 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 Q L LVLAPTRELA QI + LG + V+ VGG Sbjct: 112 QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGG 157
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 73.2 bits (178), Expect = 5e-13 Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGI--VPFCKGLDVIQQAQSGTGKTATFCSG 428 +SF+++GL LL+G+YA F+KPS IQ+R + + + ++I Q+QSGTGKTA F Sbjct: 79 KSFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLYNPPRNMIAQSQSGTGKTAAFSLT 138 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L ++D + QA+ LAP+R LA+Q +V++ +G + Sbjct: 139 MLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKF 174
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 73.2 bits (178), Expect = 5e-13 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 14/159 (8%) Frame = +3 Query: 153 EGSQFD---AKNYDSKMQELLSQGETEEFFTSYDE-------VHESFDDMGLQENLLRGI 302 E SQ D K+ D ++E + E EF+ +E VH++F+ + L +L+G+ Sbjct: 190 EMSQADLGKGKDEDEDIEEDTKE-EMAEFYAPEEESADAKKIVHKTFNSLSLSRPVLKGL 248 Query: 303 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQAL 473 + G+ PS IQ I G D+I A +G+GKTA F I+++L Y + + + Sbjct: 249 GSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAHIASTRVV 308 Query: 474 VLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 VL PTRELA Q+ V + +G ++ G+ VGG ++R+ Sbjct: 309 VLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQ 347
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 72.8 bits (177), Expect = 7e-13 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 10/164 (6%) Frame = +3 Query: 123 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVH-------ESFDDMGLQ 281 D+ A P+ DA + + +E + + + FF +E + SF M L Sbjct: 208 DSVATPTNHPDDDASDASDDEEDAEE---EAKRKAFFAPEEENNPDKKATASSFQTMSLS 264 Query: 282 ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---G 452 ++RG+ + GF KP+ IQ + I G DV+ A++G+GKT F IL++L Y Sbjct: 265 RPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKK 324 Query: 453 LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 + + +VL PTRELA Q V L + +K VGG S++ Sbjct: 325 IPTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLK 368
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 72.4 bits (176), Expect = 9e-13 Identities = 49/120 (40%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 55 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 114 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQLD E +V+ RELA QI Y+ VK GGT + +D Sbjct: 115 VFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKD 174
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 72.4 bits (176), Expect = 9e-13 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 5/151 (3%) Frame = +3 Query: 150 PEGSQFDAKNYDSKMQELLS-QGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKP 326 P Q D K + +++ + EE T+ ++H +F + L +L+G+ G+ KP Sbjct: 222 PGSDQEDEKPVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKP 281 Query: 327 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTREL 497 S IQ I G D++ A +G+GKTA + I+++L Y + + +VLAPTREL Sbjct: 282 SPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAPTREL 341 Query: 498 AQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 A Q+ V + +G ++ + VGG ++R+ Sbjct: 342 AIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQ 372
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 72.0 bits (175), Expect = 1e-12 Identities = 44/104 (42%), Positives = 58/104 (55%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F D+G+ ++ GF+ P+ IQ + I + DVI AQ+G+GKTA F ILQ Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L A VLAPTRELA QI + + ALG +GV+ VGG Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGG 209
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 71.6 bits (174), Expect = 2e-12 Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 48 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 107 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQLD E +V+ RELA QI Y+ V+ GGT + +D Sbjct: 108 VFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIAKD 167
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 71.6 bits (174), Expect = 2e-12 Identities = 41/110 (37%), Positives = 62/110 (56%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 + V ++F D+G+ + L G++ P+ IQ++ I + D+I A++G+GKTA F Sbjct: 86 ETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFA 145 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ILQ L ALVLAPTRELA QI + ALG + ++ +GG Sbjct: 146 LPILQALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGG 195
>SUB2_CRYNE (Q5KNA3) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 442 Score = 71.6 bits (174), Expect = 2e-12 Identities = 47/120 (39%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Frame = +3 Query: 237 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 52 SYVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTA 111 Query: 414 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 590 F LQQ++ E ++L TRELA QI+ ++ V+ GGT + D Sbjct: 112 VFVLAALQQIEPVDGEVSIIILCHTRELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISAD 171
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 71.2 bits (173), Expect = 2e-12 Identities = 41/109 (37%), Positives = 58/109 (53%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 ++F +GL + L+ + A P+AIQ I KG D I A++G+GKT F +L Sbjct: 9 QNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPML 68 Query: 435 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 Q +VL PTRELA QI + ALG Y+ ++V VGG S+ Sbjct: 69 TQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGGESI 117
>DBP5_DEBHA (Q6BRE4) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 493 Score = 71.2 bits (173), Expect = 2e-12 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 103 KSFEELGLSSELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLT 162 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L ++D Q + LAP RELA+Q +V+ + + Sbjct: 163 MLSRVDESDPNTQCICLAPARELARQTLEVITTMSKF 199
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 71.2 bits (173), Expect = 2e-12 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL + +GI G++ P+ IQ++ I G DV+ A++G+GKTA F + ++ Sbjct: 97 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 156 Query: 441 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L + +AL+L+PTRELA Q K + LG + G+K +GG + + Sbjct: 157 LKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMED 207
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 70.9 bits (172), Expect = 3e-12 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 3/169 (1%) Frame = +3 Query: 90 DPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDD 269 D P H D +A + S+ DA+ + + EE T+ + SF D Sbjct: 259 DSVATPVHHPDDEAASDEESEAESEVDAEEAEKRKAFFAP----EEKSTAVSTFNRSFQD 314 Query: 270 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 449 L +LRG+ + F P+ IQQ+ I G D++ A +G+GKTA F IL++L + Sbjct: 315 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLF 374 Query: 450 ---GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + +L PTRELA Q V L + + VGG S+RE Sbjct: 375 RPRKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLRE 423
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 70.5 bits (171), Expect = 3e-12 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL + +GI G++ P+ IQ++ I G DV+ A++G+GKTA F + ++ Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157 Query: 441 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L + +AL+L+PTRELA Q K + LG + G+K +GG + + Sbjct: 158 LKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMED 208
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 70.5 bits (171), Expect = 3e-12 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 7/115 (6%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF M L LLR + + F P+ IQ R I G D++ A +G+GKTA F IL+ Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282 Query: 438 QLDY-----GLVECQALVLAPTRELAQQIEKVMRALGDY--LGVKVHACVGGTSV 581 +L Y G C+ LVL PTRELA Q E V +AL + L V+ VGG S+ Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSL 337
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/91 (45%), Positives = 53/91 (58%) Frame = +3 Query: 315 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 494 F KP+ IQ I +G D+I AQ+G+GKTA F ILQ L + ALVLAPTRE Sbjct: 3 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYFALVLAPTRE 62 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 LA QI+ ALG +G++ VGG + + Sbjct: 63 LAFQIKDTFDALGSSMGLRSSCIVGGMDMMD 93
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 70.5 bits (171), Expect = 3e-12 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL +LLR I GF P+ IQ++ I + DV+ A++G+GKTA F ++++ Sbjct: 101 FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIER 160 Query: 441 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L V +AL+++P+RELA Q KV++ LG +K VGG S+ E Sbjct: 161 LKGHSPRVGSRALIMSPSRELALQTLKVVKELGRGTDLKTVLLVGGDSLEE 211
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 70.5 bits (171), Expect = 3e-12 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL +LL+ I GF P+ IQ++ I G DV+ A++G+GKTA F ++++ Sbjct: 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150 Query: 441 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L V + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 151 LKSHSTKVGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEE 201
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 70.1 bits (170), Expect = 5e-12 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL NLL+ I GF P+ IQ++ I + DV+ A++G+GKTA F ++++ Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152 Query: 441 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L + + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEE 203
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 70.1 bits (170), Expect = 5e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 98 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 157 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 581 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 158 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRI 209
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 70.1 bits (170), Expect = 5e-12 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Frame = +3 Query: 249 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 428 + +F +GL +++ + G+ KPS IQ I +G DV+ AQ+G+GKTA F Sbjct: 4 IESTFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLP 63 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGG 572 +L L+ L Q LVLAPTRELA Q+ + Y +G+ V GG Sbjct: 64 LLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGG 112
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 70.1 bits (170), Expect = 5e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 156 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 581 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 157 MLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRI 208
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 70.1 bits (170), Expect = 5e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 156 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 581 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 157 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRI 208
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 69.7 bits (169), Expect = 6e-12 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL NLL+ I GF P+ IQ++ I DV+ A++G+GKTA F ++++ Sbjct: 72 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 131 Query: 441 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L V + LVL+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 132 LKSHSTKVGARGLVLSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEE 182
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 69.7 bits (169), Expect = 6e-12 Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 7/120 (5%) Frame = +3 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 +ESF D+ + E L G+ + F+ + IQ R I KG DV+ A++G+GKT F I Sbjct: 47 YESFSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPI 106 Query: 432 LQQL------DY-GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 L+ L D+ GL AL+++PTRELA QI +V+R +G Y +GG S++E+ Sbjct: 107 LENLYRKQWSDHDGL---GALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEE 163
>DD19B_HUMAN (Q9UMR2) ATP-dependent RNA helicase DDX19B (EC 3.6.1.-) (DEAD box| protein 19B) (DEAD box RNA helicase DEAD5) Length = 479 Score = 69.7 bits (169), Expect = 6e-12 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 92 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLA 151 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L Q++ Q L L+PT ELA Q KV+ +G + Sbjct: 152 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKF 188
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 69.3 bits (168), Expect = 8e-12 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F +GL +++ + G+ KPS IQ I +G DV+ AQ+G+GKTA F +L Sbjct: 7 TFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLH 66 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGG 572 L+ L Q LVLAPTRELA Q+ + Y +G+ V GG Sbjct: 67 NLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGG 112
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 69.3 bits (168), Expect = 8e-12 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 4/118 (3%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 +++E+F+ + L +L+G+ + G+ KPS IQ I G D+I A +G+GKTA F Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287 Query: 426 GILQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 I+++L Y + + +VL PTRELA Q+ V + + ++ G+ VGG ++R+ Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 69.3 bits (168), Expect = 8e-12 Identities = 43/110 (39%), Positives = 59/110 (53%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 +E ++F D+G+ + L G+ KP+ IQ I +G D+I A++G+GKT F Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 IL L ALVL PTRELA QI + ALG +GV+ VGG Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGG 129
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 68.9 bits (167), Expect = 1e-11 Identities = 43/110 (39%), Positives = 59/110 (53%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 +E ++F D+G+ + L G+ KP+ IQ I +G D+I A++G+GKT F Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 IL L ALVL PTRELA QI + ALG +GV+ VGG Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGG 129
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 68.6 bits (166), Expect = 1e-11 Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF +GL + +L+ I GF++P+ IQ++ I +G DV+ A++G+GKTA F +L+ Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162 Query: 438 QLDY--GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 +L V +A++L+P+RELA Q KV++ +++ VGG S+ E Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEE 214
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 68.6 bits (166), Expect = 1e-11 Identities = 43/113 (38%), Positives = 59/113 (52%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 D +SF ++G+ + L G+ KPS IQQ + +G DVI A++G+GKT F Sbjct: 40 DVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 +LQ L LVL PTRELA QI + ALG +G+ VGG + Sbjct: 100 IPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 68.6 bits (166), Expect = 1e-11 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 7/111 (6%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F D L L+ I+ GF + IQ + + +G D I +AQ+GTGKTA F I+ Q Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query: 441 L-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L + + E +AL++APTREL QI K AL Y G+ V + VGG Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGG 121
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 68.2 bits (165), Expect = 2e-11 Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 7/122 (5%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E ++SF D+ L E G+ + F+ + IQ R I KG D++ A++G+GKT F Sbjct: 42 ETYKSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLI 101 Query: 426 GILQQL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 +L+ L GL AL+L+PTRELA QI +V+R +G Y +GG S++ Sbjct: 102 PVLENLYRKQWSEHDGL---GALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGGKSLK 158 Query: 585 ED 590 E+ Sbjct: 159 EE 160
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 68.2 bits (165), Expect = 2e-11 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%) Frame = +3 Query: 237 SYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 416 S ++ SF L +LR + + F KP+ IQ R I G D++ A +G+GKTA Sbjct: 327 STNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAA 386 Query: 417 FCSGILQQLDYGL-------VECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 575 F +++L + + + L+LAPTRELA Q V +++ + ++ CVGG Sbjct: 387 FMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGL 446 Query: 576 SVR 584 SV+ Sbjct: 447 SVK 449
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 68.2 bits (165), Expect = 2e-11 Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Frame = +3 Query: 123 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGI 302 DA + E + D +N D ++Q+ ++ + S ++ E F D+ L EN+ + I Sbjct: 51 DADQNTSVESESEELDNENEDERVQKSVNLNAS-----STSDI-EKFSDLQLSENIQKAI 104 Query: 303 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV-----ECQ 467 GFE + IQ+R I P G DV+ A++G+GKT F ++ L Y L Sbjct: 105 KEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEML-YALKFKPRNGTG 163 Query: 468 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++++PTRELA QI V + L Y +GG + R + Sbjct: 164 VIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAE 204
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 67.8 bits (164), Expect = 2e-11 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 14/144 (9%) Frame = +3 Query: 150 PEGSQFDAKNYDSKMQELLSQ---------GETEEFFTSYDEVHESFDDMGLQENLLRGI 302 PE +Q A+ + QEL Q + E+ + D+ +F D+GL L++ + Sbjct: 51 PEATQQQAQQQTEEEQELEQQLKDEQKQQDEKDEKKQSEKDDADLTFSDLGLDPRLVQAV 110 Query: 303 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF----CSGILQQLDYGLVE-CQ 467 FEKP+ +Q++ I G DV+ +A++G+GKTA + SGIL++ Sbjct: 111 AKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLSGILKRKATDPTPFTS 170 Query: 468 ALVLAPTRELAQQIEKVMRALGDY 539 AL+L PTRELA Q+ K + A + Sbjct: 171 ALILVPTRELADQVHKAIDAFSAF 194
>DD19A_MOUSE (Q61655) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DEAD box RNA helicase DEAD5) (mDEAD5) (Eukaryotic translation initiation factor 4A-related sequence 1) Length = 478 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L +++ Q L L+PT ELA Q KV+ +G + Sbjct: 151 MLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKF 187
>DD19A_HUMAN (Q9NUU7) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DDX19-like protein) Length = 478 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L +++ Q L L+PT ELA Q KV+ +G + Sbjct: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKF 187
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 67.8 bits (164), Expect = 2e-11 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 3/146 (2%) Frame = +3 Query: 159 SQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQ 338 S+ DA+ ++K + + E ++ + +SF + L +LRG+ A F P+ IQ Sbjct: 271 SEVDAEE-EAKRKAFFAPEEQTSEQSAAELSKKSFQEFNLSRPILRGLAAVNFTNPTPIQ 329 Query: 339 QRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQQI 509 ++ I G D++ A +G+GKTA F IL++L + + + +L PTRELA Q Sbjct: 330 RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQC 389 Query: 510 EKVMRALGDYLGVKVHACVGGTSVRE 587 V L Y + VGG S+RE Sbjct: 390 YNVATKLATYTDITFCQLVGGFSLRE 415
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 67.8 bits (164), Expect = 2e-11 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 7/111 (6%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F D L +L+ I+ GF + IQ + + +G D I +AQ+GTGKTA F I+ Q Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query: 441 L-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L + + E +AL++APTREL QI K AL Y G+ V VGG Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGG 121
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 67.0 bits (162), Expect = 4e-11 Identities = 42/108 (38%), Positives = 56/108 (51%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF D+GL E L + KPSAIQ+ I KG D I A++G+GKT F + +L Sbjct: 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLA 61 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 + LVL PTRELA QI + ALG + ++V GG + Sbjct: 62 EWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDM 109
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 67.0 bits (162), Expect = 4e-11 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 428 ++F+ + L+ +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 73 KTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 132 Query: 429 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSV 581 +L +++ L Q L L+PT ELA Q +V +G + +K+ V G V Sbjct: 133 MLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV 184
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 66.6 bits (161), Expect = 5e-11 Identities = 39/108 (36%), Positives = 56/108 (51%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF+++G+ + L + + P+ IQ I KG D I A++G+GKT F + +L Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 Q LVL PTRELA QI + ALG + +KV VGG + Sbjct: 62 QWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDI 109
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 66.2 bits (160), Expect = 7e-11 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F ++ L E+LL + GF +P+AIQ I P G DV+ A +GTGKTA + LQ Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64 Query: 438 Q-LDYGLVEC---QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 578 LD+ + + L+L PTRELA Q+ R L + + + GG + Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVA 115
>DBP8_CANAL (Q59PR3) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 440 Score = 66.2 bits (160), Expect = 7e-11 Identities = 41/105 (39%), Positives = 56/105 (53%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF+D+G+ + L + A P+AIQ I KG D I A++G+GKT F + +L Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 Q L+L PTRELA QI + ALG + +KV VGG Sbjct: 62 QWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGG 106
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Frame = +3 Query: 291 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA 470 L + G+ + +Q + G DV QA++G+GKTA F G+LQQ+D L + QA Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74 Query: 471 LVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 LVL PTRELA Q+ +R L +L K+ GG Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGG 109
>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 595 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 6/98 (6%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 ++F D L L R I+ FEKP+++Q I +G D++ QA++G+GKTA + IL Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPIL 73 Query: 435 Q------QLDYGLVECQALVLAPTRELAQQIEKVMRAL 530 + Q+D AL+L PTRELAQQ+ V+ L Sbjct: 74 ELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKL 111
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 65.5 bits (158), Expect = 1e-10 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 5/119 (4%) Frame = +3 Query: 249 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 428 + +SF D+ L E G+ + ++ + IQ R I KG D++ A++G+GKT F Sbjct: 45 IFKSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVP 104 Query: 429 ILQQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +L+ L Y + AL+L+PTRELA QI +V+R +G Y +GG S++E+ Sbjct: 105 VLENL-YRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEE 162
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/104 (39%), Positives = 56/104 (53%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F ++GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+ Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L LVL PTRELA QI + R LG LG+K VGG Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGG 107
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Frame = +3 Query: 273 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD-- 446 GL + L I G+E P++IQ + I G DVI A++G+GKT F +L+ + Sbjct: 409 GLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQ 468 Query: 447 ---YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 G A+V++PTRELA QI K + L ++ CVGG+S+ ED Sbjct: 469 RPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISED 519
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 65.1 bits (157), Expect = 1e-10 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 5/154 (3%) Frame = +3 Query: 144 MAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVH-ESFDDMGLQENLLRGIYAYGFE 320 M + ++ DA K Q S+ E + H E FD++ L L+ I GF Sbjct: 1 MGAQETREDASGSSKKRQRPESEVAAESDAAASSTAHAEKFDELNLSSQTLKAIGKMGFT 60 Query: 321 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPT 488 K + +Q R I P G DV+ A++G+GKT F ++ L + + +V+ PT Sbjct: 61 KMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRNGTGVIVITPT 120 Query: 489 RELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 RELA QI V R L ++ +GG + R++ Sbjct: 121 RELALQIFGVARELMEFHSQTFGIVIGGANRRQE 154
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 65.1 bits (157), Expect = 1e-10 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 12/123 (9%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL- 434 S+ D L ++L I G+++P+ IQ++ I + D+I A++G+GKTA F +L Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451 Query: 435 -----------QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 ++ D G A++LAPTRELAQQIE+ G LG++ A +GG S Sbjct: 452 WITTLPKIDRIEESDQGPY---AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGIS- 507 Query: 582 RED 590 RED Sbjct: 508 RED 510
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 65.1 bits (157), Expect = 1e-10 Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 12/123 (9%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL- 434 S+ D L ++L I G+++P+ IQ++ I + D+I A++G+GKTA F +L Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451 Query: 435 -----------QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 ++ D G A++LAPTRELAQQIE+ G LG++ A +GG S Sbjct: 452 WITTLPKIDRIEESDQGPY---AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGIS- 507 Query: 582 RED 590 RED Sbjct: 508 RED 510
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 64.7 bits (156), Expect = 2e-10 Identities = 41/104 (39%), Positives = 56/104 (53%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F ++GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+ Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L LVL PTRELA QI + R LG LG+K VGG Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGG 107
>DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 619 Score = 64.7 bits (156), Expect = 2e-10 Identities = 35/105 (33%), Positives = 56/105 (53%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F+ +GL L+ + + +KP+ IQ + P G D I A++G+GKT F I++ Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ A+VL PTRELA Q+ + +G LG+ VGG Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGG 257
>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 613 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +3 Query: 234 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 413 +S + H SF + L +L+GI F KP+ IQ I G D++ AQ+G+GKT Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182 Query: 414 TFCSGILQQLDY-GLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 587 + I+++L Y + ++L PTRELA Q+ + + L ++ + + VGG ++R+ Sbjct: 183 AYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQ 242
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 64.7 bits (156), Expect = 2e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E+FD+ G + +L + A GFE+P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 121 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 180 Query: 435 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ + L+LAPTRELA QI+ + G ++ + CV G Sbjct: 181 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYG 230
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 64.3 bits (155), Expect = 2e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E+FD+ G + +L + A GFEKP+AIQ +G G DV+ A++G+GKT ++C + Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199 Query: 435 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ + L+LAPTRELA QI+ + G ++ + CV G Sbjct: 200 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYG 249
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 64.3 bits (155), Expect = 2e-10 Identities = 39/110 (35%), Positives = 60/110 (54%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 + +SF D+G+ L+ + A +P+ IQ+ I +G + I A++G+GKTA F Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62 Query: 423 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 I+++ AL+L PTRELA QI++ ALG L +K VGG Sbjct: 63 LPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGG 112
>DBP8_YEAST (P38719) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) (DEAD box| protein 8) Length = 431 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/107 (35%), Positives = 56/107 (52%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F +GL + L + A +P+AIQ+ I +G D I A++G+GKT F +L + Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 +VL PTRELA QI + ALG + ++V VGG S+ Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESI 110
>DBP10_GIBZE (Q4HZ42) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 897 Score = 63.9 bits (154), Expect = 3e-10 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F MGL NLL+ I GF P+ IQ++ I D++ A++G+GKTA F ++++ Sbjct: 84 FQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEK 143 Query: 441 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 L +AL+++P+RELA Q KV++ +K VGG S+ E Sbjct: 144 LRAHSARFGTRALIMSPSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEE 194
>DBP45_DROME (Q07886) Probable ATP-dependent RNA helicase Dbp45A (EC 3.6.1.-)| (DEAD box protein 45A) Length = 521 Score = 63.5 bits (153), Expect = 4e-10 Identities = 40/105 (38%), Positives = 56/105 (53%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F +GL+ L++ + G + + IQQ+ I G D I A++G+GKT F IL++ Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 575 L V ALVL PT ELA QI + G +GV+V GGT Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGT 113
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 63.5 bits (153), Expect = 4e-10 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Frame = +3 Query: 216 ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 395 E EE + D + F+ + L L + + F KP+ +Q + I +G D++ +A++ Sbjct: 44 EVEEEKNTKDADNTDFESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKT 103 Query: 396 GTGKTATFCSGILQQL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 557 G+GKTA + ILQ + D L L+L PTRELA+Q++ V+ + G V Sbjct: 104 GSGKTAAYVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQSVIIKFSAFCGKDVR 163 Query: 558 A 560 + Sbjct: 164 S 164
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 63.5 bits (153), Expect = 4e-10 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E F+ + L L + + F KP+ +Q + I +G D++ +A++G+GKTA + IL Sbjct: 28 EDFETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPIL 87 Query: 435 Q------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 560 Q +D + L+L PTRELA+Q++KV+ + G V + Sbjct: 88 QTILQKKAIDPSMKATTGLILVPTRELAEQVQKVITTFAAFCGKDVRS 135
>DDX56_MOUSE (Q9D0R4) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) Length = 546 Score = 63.5 bits (153), Expect = 4e-10 Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 7/123 (5%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 D+ F+ MGL LL+ + G+ +P+ IQ++ I +G D++ +A++G+GKTA + Sbjct: 3 DQEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62 Query: 423 SGILQQLDY----GLVECQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 +LQ L + G V QA LVL PT+ELA+Q + +++ L Y V V S Sbjct: 63 IPMLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAAYCARDVR--VANVSA 120 Query: 582 RED 590 ED Sbjct: 121 AED 123
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 63.5 bits (153), Expect = 4e-10 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 8/112 (7%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC-KGLDVIQQAQSGTGKTATFCSGILQ 437 F D L L+ I GF + IQ G++ F KG D I +AQ+GTGKTA F I++ Sbjct: 10 FHDFNLAPELMHAIQDLGFPYCTPIQA-GVLGFTLKGKDAIGRAQTGTGKTAAFLISIIE 68 Query: 438 QL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 QL + + E +AL++APTREL QI K L Y + V VGG Sbjct: 69 QLTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGG 120
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 63.5 bits (153), Expect = 4e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E+FD+ G + +L + A GFE+P+AIQ +G G DV+ A++G+GKT ++C + Sbjct: 130 ETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 189 Query: 435 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ + LVLAPTRELA QI+ + G ++ + CV G Sbjct: 190 VHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIR-NTCVYG 239
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 63.2 bits (152), Expect = 6e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 435 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 63.2 bits (152), Expect = 6e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 435 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 63.2 bits (152), Expect = 6e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 435 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 63.2 bits (152), Expect = 6e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 435 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 63.2 bits (152), Expect = 6e-10 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F GL ++ + G+ +PS IQ I KG DV+ AQ+G+GKTA F +L Sbjct: 7 TFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLH 66 Query: 438 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 572 + + Q LVL PTRELA Q+ + L GV V A GG Sbjct: 67 NIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKKLIGVHVLALYGG 112
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 63.2 bits (152), Expect = 6e-10 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 4/113 (3%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 +F D+ + ++G+ + K + IQ+ I KG DV+ A++G+GKT F +L+ Sbjct: 42 TFQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLE 101 Query: 438 QLDY----GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 584 +L + L ALV++PTRELA QI +V+ +G Y+ +GG V+ Sbjct: 102 KLYHERWTELDGLGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVK 154
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 5/174 (2%) Frame = +3 Query: 84 QRDPSGDPRHLL-PDASAMAGMA---PEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEV 251 +++PS P+ P+ A + EG+ D + DSK+ T+ Sbjct: 42 EKEPSPPPKKKSKPNPQAFPSLELSDNEGNNDDDDDDDSKINSYFINNNP----TAKKAK 97 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 SF GL + +L I G+++P+ IQ++ I +G DV+ A++G+GKTA F + Sbjct: 98 AGSFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPL 157 Query: 432 LQQLDYGLV-ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 +++L +A++L+P+RELA Q K ++ ++ +GG S+ ED Sbjct: 158 IERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEED 211
>DDX56_HUMAN (Q9NY93) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) (DEAD-box protein 21) Length = 547 Score = 63.2 bits (152), Expect = 6e-10 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 7/117 (5%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+ MGL LL+ + G+ +P+ IQ++ I +G D++ +A++G+GKTA + +LQ Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query: 441 LDY----GLVECQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 L + G V QA LVL PT+ELA+Q + +++ L Y V V S ED Sbjct: 69 LLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVR--VANVSAAED 123
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 4/152 (2%) Frame = +3 Query: 147 APEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKP 326 A G D K D++ +L S G + + + F ++GL E L+ I GFE Sbjct: 108 AENGDNGDKK--DTESTDLPSAGTLS--LPTVEGEPQKFTELGLSEKTLKAINDMGFETM 163 Query: 327 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRE 494 + IQ+R I P G DV+ A++G+GKT +F ++ L + + +V++PTRE Sbjct: 164 TEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRE 223 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LA QI V R L Y +GG + R + Sbjct: 224 LALQIFGVARELCQYHSQTYGIVIGGANRRAE 255
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 62.8 bits (151), Expect = 7e-10 Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG-LDVIQQAQSGTGKTATFCSGIL 434 +F+++ L +N+L I GFEKP+ IQ + I F +++ QA++G+GKTA+F ++ Sbjct: 7 NFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLI 66 Query: 435 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 + ++ +A++L PTRELA Q+ + +L +K+ GG ++ Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAI 114
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 62.8 bits (151), Expect = 7e-10 Identities = 37/110 (33%), Positives = 56/110 (50%) Frame = +3 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 + F +G + L+ + A +P+AIQ+ I KG D I A +G+GKT F + + Sbjct: 3 NSEFKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPM 62 Query: 432 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 L + +VL PTRELA QI + A G + ++V VGG S+ Sbjct: 63 LTKWSEDPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESI 112
>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 62.8 bits (151), Expect = 7e-10 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFE--KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 SF D+GL+ +L + E +P+++Q + I P +G ++ A++G+GKT ++ + Sbjct: 127 SFVDLGLEPRVLLALQEAVPEVVQPTSVQSKTIPPLLRGRHLLCAAETGSGKTLSYLLPL 186 Query: 432 LQQLDYG-------LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 Q+L G + LVL P+RELA+Q++ V ++LG YLG++V GG Sbjct: 187 FQRLLRGSDLDSRSFTAPRGLVLVPSRELAEQVQAVAQSLGGYLGLQVIELGGG 240
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 62.4 bits (150), Expect = 9e-10 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E+FD+ G ++ + A GF P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSI 193 Query: 435 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ + LVLAPTRELA QI++ M+ G ++ + CV G Sbjct: 194 VHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIR-NTCVYG 243
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 62.4 bits (150), Expect = 9e-10 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 EV SF D+ L + ++ I GF + +A+Q R I P G DV+ A++G+GKT F Sbjct: 31 EVEGSFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLI 90 Query: 426 GILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 ++ L + + +V+ PTRELA QI V R L ++ +GG + R++ Sbjct: 91 PAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQE 149
>DBP10_YEAST (Q12389) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) (DEAD box| protein 10) Length = 995 Score = 62.4 bits (150), Expect = 9e-10 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 7/147 (4%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFFTSYD-----EVHESFDDMGLQENLLRGIYAYGFEKPSA 332 D N K Q + + E+F++ + SF GL + +L I GF +P+ Sbjct: 103 DENNASGKTQTGDDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTP 162 Query: 333 IQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVECQALVLAPTRELAQQ 506 IQ++ I + D++ A++G+GKTA F ++++L G + +A++L+P+RELA Q Sbjct: 163 IQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQ 222 Query: 507 IEKVMRALGDYLGVKVHACVGGTSVRE 587 V + ++ GG S+ E Sbjct: 223 TFNVFKDFARGTELRSVLLTGGDSLEE 249
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 62.0 bits (149), Expect = 1e-09 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 + F ++GL E L+GI GFE + IQQR I P G DV+ A++G+GKT F + Sbjct: 128 KKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 187 Query: 435 QQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 + L + + +V++PTRELA QI V R L +GG + R + Sbjct: 188 EMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAE 243
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 62.0 bits (149), Expect = 1e-09 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT-----ATFCS 425 F D+ L +L + GF+ + IQ + G DV QAQ+GTGKT ATF Sbjct: 11 FSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHH 70 Query: 426 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 + QQ D G + +AL+LAPTRELA QI L G+K GG Sbjct: 71 LLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGG 119
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 62.0 bits (149), Expect = 1e-09 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 4/140 (2%) Frame = +3 Query: 183 DSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC 362 +S+ +E++ + + E +V SF + L + +R I GF K + +Q R I P Sbjct: 10 ESEKEEVVVKADVES-----SDVDHSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLM 64 Query: 363 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRAL 530 G DV+ A++G+GKT F ++ L + + +++ PTRELA QI V+R L Sbjct: 65 AGRDVLGAAKTGSGKTLAFLLPTIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVREL 124 Query: 531 GDYLGVKVHACVGGTSVRED 590 ++ +GG + R++ Sbjct: 125 MEFHSQTFGIVIGGANRRQE 144
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 61.6 bits (148), Expect = 2e-09 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 8/119 (6%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 + + GL +L I + GFEKP+ IQ + + G DVI A++G+GKT F +L Sbjct: 561 QKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPML 620 Query: 435 QQL--------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + D G + AL++ PTREL QI ++ L ++V A GG ++++ Sbjct: 621 RHVKDQDPVTGDDGAI---ALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKD 676
>DBP8_ASHGO (Q756G5) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 61.6 bits (148), Expect = 2e-09 Identities = 35/110 (31%), Positives = 57/110 (51%) Frame = +3 Query: 252 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 431 + +F D+G+ + L + + +P+ IQ+ I G D I A++G+GKT F + + Sbjct: 5 NSTFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPM 64 Query: 432 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 L + +VL PTRELA QI + ALG + ++V VGG + Sbjct: 65 LTKWSADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDI 114
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/106 (30%), Positives = 63/106 (59%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F + + ++LR + G+ +P+ +QQ I + D++ ++Q+G+GKTA+F + + Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63 Query: 441 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 578 ++ + QAL+L PTRELA Q+++ + +G + +K A G +S Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSS 109
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 61.2 bits (147), Expect = 2e-09 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 434 +FD+ G E +L+ + GFEKP+AIQ +G G D+I A +G+GKT ++C GI+ Sbjct: 115 TFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIV 174 Query: 435 QQLDYGLVE----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 L+ LVLAPTRELA QI+K G ++ + CV G Sbjct: 175 HINAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSSRIR-NTCVYG 223
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 61.2 bits (147), Expect = 2e-09 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 8/115 (6%) Frame = +3 Query: 267 DMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL- 443 + + +L I G+++PS IQ++ I + D+I A++G+GKTA F +L + Sbjct: 319 ESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIG 378 Query: 444 -------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 D + AL++APTRELAQQIE R LG K + VGG SV E Sbjct: 379 HLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEE 433
>MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 648 Score = 61.2 bits (147), Expect = 2e-09 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 2/150 (1%) Frame = +3 Query: 144 MAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEK 323 M GS+ +KNY+ S E E+ S+ ++ L +L + GF K Sbjct: 90 MTSLGSKVTSKNYNE-----FSTLEEEDEHNSHGVDVSAWAHFSLSPEMLGSLSKAGFSK 144 Query: 324 PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVECQALVLAPTREL 497 P IQ I G D+I +A +G+GKT F IL+ + QALV+APTREL Sbjct: 145 PMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTREL 204 Query: 498 AQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 A QI + + ++V + GG +V++ Sbjct: 205 AHQICQHFELIKPSPNIRVMSITGGLAVQK 234
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 60.8 bits (146), Expect = 3e-09 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 4/114 (3%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F ++GL E ++GI GFE + +Q+R I P G DV+ A++G+GKT +F ++ Sbjct: 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query: 441 LDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 L + + A++++PTRELA QI +R L + +GG + R + Sbjct: 181 LSALRFKPRNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRRAE 234
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 60.8 bits (146), Expect = 3e-09 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 10/120 (8%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 S+++ GL + LL + G+++P+ IQ+ I + D+I A +G+GKTA+F +L Sbjct: 365 SWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLV 424 Query: 438 QLDY--GLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + E + A+VLAPTRELAQQIE R LG V + VGG S E Sbjct: 425 YISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEE 484
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 60.8 bits (146), Expect = 3e-09 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 11/152 (7%) Frame = +3 Query: 168 DAKNYDSKMQELLSQGETEEFF-----TSYDE-VHESFDDMGLQENLLRGIYAYGFEKPS 329 +AK K +++ + T E +++D+ V ++F++ GL E L+ I GF K + Sbjct: 69 EAKKDKKKEKKIQEEERTRELTKPTAESNHDDIVTDNFEEAGLSEPTLKAIKDMGFSKMT 128 Query: 330 AIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL-----VECQALVLAPTRE 494 +Q + I P G DV+ A++G+GKT F ++ L Y L +V++PTRE Sbjct: 129 QVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEML-YSLRFKPRNGTGVVVVSPTRE 187 Query: 495 LAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 LA QI V R L + +GG + R++ Sbjct: 188 LALQIFGVARELMAHHSQTFGIVIGGANRRQE 219
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 60.8 bits (146), Expect = 3e-09 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 10/120 (8%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 S+D+ GL + L+ + G+++P+ IQ+ I + D+I A +G+GKTA+F +L Sbjct: 368 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLV 427 Query: 438 QLDY--GLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 + + E + A+VLAPTRELAQQIE + + LG V + VGG S E Sbjct: 428 YIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEE 487
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 60.8 bits (146), Expect = 3e-09 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 4/149 (2%) Frame = +3 Query: 156 GSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 335 G + D+ + D++ + L++ S F ++ L + ++ I GF K + I Sbjct: 74 GDKEDSDDKDAEAGDELTKTNDSLIAPSIATNATDFSELNLSDKTMKAIAEMGFTKMTEI 133 Query: 336 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQ 503 Q+RGI P G DV+ A++G+GKT F ++ L + + A+V+ PTRELA Sbjct: 134 QRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFKPRNGTGAIVVTPTRELAL 193 Query: 504 QIEKVMRALGDYLGVKVHACVGGTSVRED 590 QI V R L +GG + R + Sbjct: 194 QIFGVARELMKNHSQTYGVVIGGANRRAE 222
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 60.5 bits (145), Expect = 4e-09 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Frame = +3 Query: 258 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 437 SF G + LL I GF++P+ IQ++ I + DV+ A++G+GKTA F +++ Sbjct: 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157 Query: 438 QL--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 587 +L V +A++L+P+RELA Q K ++ ++ +GG S+ E Sbjct: 158 KLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGDSLEE 209
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 60.5 bits (145), Expect = 4e-09 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 7/117 (5%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F D+ L E G+ A FE + +Q+ I KG D++ A++G+GKT F +L++ Sbjct: 59 FSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEK 118 Query: 441 L------DY-GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 L +Y GL AL+++PTRELA QI +V+R +G +GG S++E+ Sbjct: 119 LYRARWTEYDGL---GALIISPTRELAVQIFEVLRKIGRNHSFSAGLVIGGKSLKEE 172
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 60.1 bits (144), Expect = 5e-09 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%) Frame = +3 Query: 216 ETEEFFTSYD--EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 389 E+E T +D + +FD+ G + +L+ + A GF+KP++IQ +G G D++ A Sbjct: 95 ESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIA 154 Query: 390 QSGTGKTATFC-SGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKV 554 +G+GKT ++C GI+ L+ LVLAPTRELA QI+K G ++ Sbjct: 155 ATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIR- 213 Query: 555 HACVGG 572 + CV G Sbjct: 214 NTCVYG 219
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 60.1 bits (144), Expect = 5e-09 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 18/182 (9%) Frame = +3 Query: 96 SGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQEL-LSQGE---------TEEFFTSYD 245 S D + P S A A +G++ A D+ L LS GE + +F + Sbjct: 52 SDDEKQNAPQVSKTAKGA-KGAKVAAPRSDAAFPSLELSDGEDADNGDKDDVDSYFNTTS 110 Query: 246 EVHES------FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 407 ++ S F GL + +L I GF +P+ IQ++ I + D++ A++G+GK Sbjct: 111 QLAASKAKKGSFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGK 170 Query: 408 TATFCSGILQQLDY--GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 TA F ++++L + +A++L+P+RELA Q KV + ++ GG + Sbjct: 171 TAAFVLPLIEKLKMHSAKIGARAMILSPSRELAMQTHKVFKEFAKGSNLRSVLLTGGDGL 230 Query: 582 RE 587 + Sbjct: 231 ED 232
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 60.1 bits (144), Expect = 5e-09 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F+ L LL+ + G+ +P+AIQ I + DV+ A +GTGKTA F LQ Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65 Query: 441 -LDYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 578 LDY + + LVL PTRELA Q+ + L + + + GG + Sbjct: 66 LLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVA 115
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 60.1 bits (144), Expect = 5e-09 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 +SF+++ L E ++ I F K + IQ+RGI P G DV+ A++G+GKT F ++ Sbjct: 115 QSFEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVI 174 Query: 435 QQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 590 + L + + +V++PTRELA QI V R L + +GG + R + Sbjct: 175 EMLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAE 230
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 60.1 bits (144), Expect = 5e-09 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Frame = +3 Query: 261 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 440 F D+ + E L+G+ F K + IQ+ I KG DV+ A++G+GKT F ++++ Sbjct: 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEK 102 Query: 441 LD----YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 581 L + AL+++PTRELA QI +V+ +G + +GG V Sbjct: 103 LYREKWTDMDGLGALIISPTRELAMQIYEVLSKIGKHTTFSAGLVIGGKDV 153
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 60.1 bits (144), Expect = 5e-09 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Frame = +3 Query: 255 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 434 E+FD+ G ++ + A GF P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 132 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 191 Query: 435 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 572 ++ + L+LAPTRELA QI++ + G ++ + CV G Sbjct: 192 VHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIR-NTCVYG 241
>DBP9_GIBZE (Q4IJ56) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 615 Score = 60.1 bits (144), Expect = 5e-09 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Frame = +3 Query: 246 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 425 E SF D+GL LL+ I F KP+ +Q++ I G DV+ +A G+GKTA + Sbjct: 37 EEETSFVDLGLDPRLLQAIAQQKFAKPTLVQRKAIPLALNGQDVLAKADCGSGKTAAYVL 96 Query: 426 GILQQL-----DYGLVECQALVLAPTRELAQQIEKVMRALGDY 539 +L + AL+L PTRELA Q+ K + + Sbjct: 97 PLLSSILKRKATDSTAFTTALILVPTRELADQVSKAIEQFASF 139
>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 605 Score = 59.7 bits (143), Expect = 6e-09 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%) Frame = +3 Query: 243 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 422 +E F+ + L L + + F KP+ +Q + I +G D++ +A++G+GKTA + Sbjct: 23 EEDDADFESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYV 82 Query: 423 SGILQQL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 560 ILQ + D L+L PTRELA+Q++ V+ + G V + Sbjct: 83 LPILQTILQKKATDPSFKATTGLILVPTRELAEQVQNVVTTFAAFCGKDVRS 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,916,909 Number of Sequences: 219361 Number of extensions: 1933528 Number of successful extensions: 7144 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 6392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6809 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
