Clone Name | bart43a05 |
---|---|
Clone Library Name | barley_pub |
>GLNE_AZOSE (Q5P7S1) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 938 Score = 31.6 bits (70), Expect = 1.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -2 Query: 513 VQKFLQHLSPLGSLLVHVSFYLLWRCLSLRH 421 V+K HLS L L++ ++ L+WR + +RH Sbjct: 649 VEKLADHLSALADLMLELALPLVWRKIKIRH 679
>PP4R2_ASHGO (Q75D77) Serine/threonine-protein phosphatase 4 regulatory subunit| 2 (PP4R2) Length = 356 Score = 30.8 bits (68), Expect = 3.2 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Frame = +1 Query: 79 EDRGMAEAVRD--DHRGVVDIVEDDDTGLHPSNHGDSTWEIEELEPEDRTAGPPPRLSPR 252 ED G A+++ D+ G D EDDD + S E E++E E+ GP P + Sbjct: 188 EDEGRDAAIQEYYDNEGAGDD-EDDDQDYVDEDSATSEDEEEDVEEEEEEEGPEPEVGLE 246 Query: 253 AAATSDADDVYVAVGK 300 A + V K Sbjct: 247 PVHAESAPEECVGTNK 262
>GOP2_CAEEL (P46577) Gro-1 operon protein 2| Length = 355 Score = 30.0 bits (66), Expect = 5.4 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = -3 Query: 425 GIIPNGVGMVATTGKTCTR*TKLRGLASRRSAHDSAAMLDPPLPTATYTSSAS 267 G+ PNG M CTR K+ L ++RS+ S +LD P +T SAS Sbjct: 95 GMGPNGAIMTCLN-LMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSAS 146
>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 4036 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +1 Query: 373 VHVFPVVATIPTPLGMMPKRQATPEQVETYMNQERSKRREMLQKFLDHCRNFQVN 537 V P+V PL +P +A + MN + KR E +QK L+H R + N Sbjct: 724 VEAVPIVEKRMFPLPEVPIGEAN--SISRVMNIFKEKREESMQKKLEHDRQAEAN 776
>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1| Length = 1244 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = +1 Query: 157 LHPSNHGDSTWEIEELE---PEDRTAGPPPRLSPRAAATSDADDVYVA 291 L P H D ++ E P++ GPPP + R AT++ D A Sbjct: 166 LPPPQHNDRARMMQSKEDQAPDEDEEGPPPAMPARPTATTETTDATAA 213
>PPCK_PYRKO (Q6F494) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (PckTk) Length = 623 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +1 Query: 391 VATIPTPLGMMPKRQATPEQVETYMNQERSKRREMLQKFLDHCRNFQVNVDVYLIESDQI 570 V I TP+G +PK + + + +N+E +K D+ R F++ V L + D+I Sbjct: 528 VEAIETPIGYIPKYKDLAKLFKDVLNKEYTKE--------DYERQFKIRVPELLAKIDRI 579 Query: 571 ADAVTEL 591 + +L Sbjct: 580 EEIYRKL 586
>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 491 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +1 Query: 151 TGLHPSNHGDSTWEIEELEPEDRTAGPPPRL---SPRAAATSDADD 279 TG PS+HG E E D AGP +P A + DADD Sbjct: 15 TGSRPSSHGGGGPAAAEEEVRDAAAGPDMGAAGDAPAPAPSKDADD 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,930,489 Number of Sequences: 219361 Number of extensions: 1144792 Number of successful extensions: 4875 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4873 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)