ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLNE_AZOSE (Q5P7S1) Glutamate-ammonia-ligase adenylyltransferase... 32 1.9
2PP4R2_ASHGO (Q75D77) Serine/threonine-protein phosphatase 4 regu... 31 3.2
3GOP2_CAEEL (P46577) Gro-1 operon protein 2 30 5.4
4RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L... 29 9.3
5SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1 29 9.3
6PPCK_PYRKO (Q6F494) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 29 9.3
7DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.... 29 9.3

>GLNE_AZOSE (Q5P7S1) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 938

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 513 VQKFLQHLSPLGSLLVHVSFYLLWRCLSLRH 421
           V+K   HLS L  L++ ++  L+WR + +RH
Sbjct: 649 VEKLADHLSALADLMLELALPLVWRKIKIRH 679



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>PP4R2_ASHGO (Q75D77) Serine/threonine-protein phosphatase 4 regulatory subunit|
           2 (PP4R2)
          Length = 356

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = +1

Query: 79  EDRGMAEAVRD--DHRGVVDIVEDDDTGLHPSNHGDSTWEIEELEPEDRTAGPPPRLSPR 252
           ED G   A+++  D+ G  D  EDDD      +   S  E E++E E+   GP P +   
Sbjct: 188 EDEGRDAAIQEYYDNEGAGDD-EDDDQDYVDEDSATSEDEEEDVEEEEEEEGPEPEVGLE 246

Query: 253 AAATSDADDVYVAVGK 300
                 A +  V   K
Sbjct: 247 PVHAESAPEECVGTNK 262



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>GOP2_CAEEL (P46577) Gro-1 operon protein 2|
          Length = 355

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -3

Query: 425 GIIPNGVGMVATTGKTCTR*TKLRGLASRRSAHDSAAMLDPPLPTATYTSSAS 267
           G+ PNG  M       CTR  K+  L ++RS+  S  +LD P     +T SAS
Sbjct: 95  GMGPNGAIMTCLN-LMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSAS 146



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>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 4036

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 373 VHVFPVVATIPTPLGMMPKRQATPEQVETYMNQERSKRREMLQKFLDHCRNFQVN 537
           V   P+V     PL  +P  +A    +   MN  + KR E +QK L+H R  + N
Sbjct: 724 VEAVPIVEKRMFPLPEVPIGEAN--SISRVMNIFKEKREESMQKKLEHDRQAEAN 776



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>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1|
          Length = 1244

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 157 LHPSNHGDSTWEIEELE---PEDRTAGPPPRLSPRAAATSDADDVYVA 291
           L P  H D    ++  E   P++   GPPP +  R  AT++  D   A
Sbjct: 166 LPPPQHNDRARMMQSKEDQAPDEDEEGPPPAMPARPTATTETTDATAA 213



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>PPCK_PYRKO (Q6F494) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
           (PckTk)
          Length = 623

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +1

Query: 391 VATIPTPLGMMPKRQATPEQVETYMNQERSKRREMLQKFLDHCRNFQVNVDVYLIESDQI 570
           V  I TP+G +PK +   +  +  +N+E +K         D+ R F++ V   L + D+I
Sbjct: 528 VEAIETPIGYIPKYKDLAKLFKDVLNKEYTKE--------DYERQFKIRVPELLAKIDRI 579

Query: 571 ADAVTEL 591
            +   +L
Sbjct: 580 EEIYRKL 586



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>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 491

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 151 TGLHPSNHGDSTWEIEELEPEDRTAGPPPRL---SPRAAATSDADD 279
           TG  PS+HG       E E  D  AGP       +P  A + DADD
Sbjct: 15  TGSRPSSHGGGGPAAAEEEVRDAAAGPDMGAAGDAPAPAPSKDADD 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,930,489
Number of Sequences: 219361
Number of extensions: 1144792
Number of successful extensions: 4875
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4873
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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