Clone Name | bart43a03 |
---|---|
Clone Library Name | barley_pub |
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 42.7 bits (99), Expect = 5e-04 Identities = 23/35 (65%), Positives = 27/35 (77%), Gaps = 1/35 (2%) Frame = +1 Query: 367 FLRGIDVNRAPATGGAS-EDEEPGASSPDSTLSSL 468 FLRGIDVNRAP+T EDE G SSP+ST+SS+ Sbjct: 75 FLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSV 109
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +1 Query: 367 FLRGIDVNRAPATGGASEDEEPGASSPDSTLSS 465 F+RGIDVNR P+T DE+ G SSP+ST+SS Sbjct: 67 FIRGIDVNRPPSTAEYG-DEDAGVSSPNSTVSS 98
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1)| Length = 282 Score = 35.0 bits (79), Expect = 0.097 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = +1 Query: 367 FLRGIDVNRAPATGGASEDEEPGASSPDSTLSS 465 FLR IDVN P T +EE G SSP+ST+SS Sbjct: 56 FLRKIDVNSLPTT--VDLEEETGVSSPNSTISS 86
>RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1| Length = 1889 Score = 33.1 bits (74), Expect = 0.37 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -3 Query: 378 PAKERHLVARQRRQPPIICMRALLAGGGRKEEAGAIPGLLQLLLAPQRHR 229 PAK+R L+ R G GR+E A + PGLL+ + +PQR R Sbjct: 1216 PAKKRSLILRSNNGS---------GGDGREERAESSPGLLRRMASPQRAR 1256
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2)| Length = 283 Score = 32.3 bits (72), Expect = 0.63 Identities = 18/32 (56%), Positives = 21/32 (65%) Frame = +1 Query: 370 LRGIDVNRAPATGGASEDEEPGASSPDSTLSS 465 LR IDVN P+T ED G SSP+ST+SS Sbjct: 52 LRKIDVNSFPSTVNCEED--TGVSSPNSTISS 81
>CAC1S_RABIT (P07293) Voltage-dependent L-type calcium channel alpha-1S subunit| (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle) Length = 1873 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = -1 Query: 434 PGSSSSLAPPVAGARLTSIPRRNGISWHASAASLRSSACERCSPEGAGKKRPAP 273 PG + APP + ++ P G + SL+ A +R S EG+ +RPAP Sbjct: 1729 PGMPINQAPPAPCQQPSTDPPERGQRRTSLTGSLQDEAPQRRSSEGSTPRRPAP 1782
>KAZD1_HUMAN (Q96I82) Kazal-type serine protease inhibitor domain-containing| protein 1 precursor Length = 304 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Frame = -1 Query: 416 LAPPVAGARLTSIPRRNGISWHASAASLRSSACERCSPEGAGKKR---PAPFQDCCSCCW 246 L PP GAR + P W A C C PE R +D C CCW Sbjct: 23 LTPPPTGARPSPGPDYLRRGWMRLLAE--GEGCAPCRPEECAAPRGCLAGRVRDACGCCW 80
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%) Frame = +1 Query: 367 FLRGIDVNRAPATGGASEDEEPGA--SSPDSTLSSL 468 FLRG +VNRA ++ + EE A SSP+S +SSL Sbjct: 83 FLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSL 118
>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) Length = 1472 Score = 29.3 bits (64), Expect = 5.3 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 467 RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLRSS-ACERCSPEGA 294 R SVL D S S A A +R L+S P R+ + +AS A+LR S + SPEG Sbjct: 1346 RAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLRDSPSYPDSSPEGP 1403 Query: 293 GKKRPAP 273 + P P Sbjct: 1404 SEALPPP 1410
>LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (Lectomedin-2) Length = 1474 Score = 29.3 bits (64), Expect = 5.3 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 467 RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLRSS-ACERCSPEGA 294 R SVL D S S A A +R L+S P R+ + +AS A+LR S + SPEG Sbjct: 1348 RAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLRDSPSYPDSSPEGP 1405 Query: 293 GKKRPAP 273 + P P Sbjct: 1406 SEALPPP 1412
>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (CIRL-1) Length = 1515 Score = 29.3 bits (64), Expect = 5.3 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 467 RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLRSS-ACERCSPEGA 294 R SVL D S S A A +R L+S P R+ + +AS A+LR S + SPEG Sbjct: 1389 RAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLRDSPSYPDSSPEGP 1446 Query: 293 GKKRPAP 273 + P P Sbjct: 1447 NEALPPP 1453
>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin receptor| 1) (Lectomedin-2) (Fragment) Length = 1406 Score = 29.3 bits (64), Expect = 5.3 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -1 Query: 467 RLDSVLSGDDAPGSSSSLAPPVAGAR-LTSIPRRNGISWHASAASLRSS-ACERCSPEGA 294 R SVL D S S A A +R L+S P R+ + +AS A+LR S + SPEG Sbjct: 1280 RAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSL--YASGANLRDSPSYPDSSPEGP 1337 Query: 293 GKKRPAP 273 + P P Sbjct: 1338 NEALPPP 1344
>LYOX_BOVIN (P33072) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) Length = 418 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -1 Query: 359 SWHASAASLRSSACERCSPEGAGKKRPAPFQDCCSCCWRPSV 234 +W A SL+ A RC+P A ++P Q WR + Sbjct: 4 AWTALLGSLQLCALVRCAPPAASHRQPPREQAAAPGAWRQKI 45
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 28.5 bits (62), Expect = 9.1 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Frame = +1 Query: 292 PAPSGEQRSHADDRRLAALACHEMPFLRGIDVNRAPATGGASEDEEPGASSPDS-----T 456 PAPS E+ SH+D + + + +D+N A + +DE PG S S T Sbjct: 377 PAPSYEEGSHSDSSVIT--ISPDEAETQELDINVATVSQAPWDDETPGPSYSSSEQVHVT 434 Query: 457 LSSL 468 +SSL Sbjct: 435 MSSL 438 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.127 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,753,481 Number of Sequences: 219361 Number of extensions: 875503 Number of successful extensions: 2456 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2363 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2446 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)