ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506722.1| PREDICTED Oryza sativa (japonica cultivar-group... 331 1e-87
2ref|XM_464188.1| Oryza sativa (japonica cultivar-group), mRNA 331 1e-87
3dbj|AK122103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
4dbj|AK065198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
7dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
9dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
10dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
11dbj|AK064816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
12gb|BT018664.1| Zea mays clone EL01N0510A02.d mRNA sequence 50 0.008
13gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, comple... 48 0.032
14emb|CR354000.1| Gallus gallus finished cDNA, clone ChEST598l12 44 0.50
15emb|BX932347.1| Gallus gallus finished cDNA, clone ChEST357c8 44 0.50
16ref|XM_480838.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
17gb|AC091543.2| Felis catus clone RP86-588L5, complete sequence 42 2.0
18gb|AY245373.1| Iris fulva clone FR3-6 IRRE retrotransposon, part... 42 2.0
19gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Ca... 42 2.0
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21gb|AY953408.1| Uncultured sulfate-reducing bacterium clone VO5 d... 42 2.0
22dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.9
24gb|AC009847.9| Drosophila melanogaster clone BACR03L10, complete... 40 7.9
25gb|BC015068.1| Mus musculus adaptor-related protein complex 3, b... 40 7.9
26ref|NM_009680.2| Mus musculus adaptor-related protein complex 3,... 40 7.9
27gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL03... 40 7.9
28gb|AC135950.1| Homo sapiens chromosome 16 clone CTD-2413I9, comp... 40 7.9
29gb|AC126022.4| Mus musculus BAC clone RP24-405F4 from chromosome... 40 7.9
30gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome... 40 7.9
31gb|BC057103.1| Mus musculus calcium/calmodulin-dependent protein... 40 7.9
32gb|U97015.1| Caenorhabditis elegans cosmid F48C1, complete sequence 40 7.9
33emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chr... 40 7.9
34emb|AL512271.10| Human DNA sequence from clone RP11-74K19 on chr... 40 7.9
35ref|NM_023813.3| Mus musculus calcium/calmodulin-dependent prote... 40 7.9
36ref|NM_001025438.1| Mus musculus calcium/calmodulin-dependent pr... 40 7.9
37ref|NM_001025439.1| Mus musculus calcium/calmodulin-dependent pr... 40 7.9
38gb|AC121118.6| Mus musculus, clone RP23-385E21, complete sequence 40 7.9
39gb|AC164250.4| Mus musculus BAC RP24-327O15 (Roswell Park Cance... 40 7.9
40emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
41dbj|AK220516.1| Mus musculus mRNA for mKIAA4163 protein 40 7.9
42dbj|AK145106.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 7.9
43dbj|AK142435.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 7.9
44dbj|AK143559.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 40 7.9
45dbj|AK157736.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 7.9
46gb|AF103809.2|AF103809 Mus musculus Ap-3 complex beta3A subunit ... 40 7.9
47dbj|AK163957.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 7.9
48gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome... 40 7.9
49dbj|AK171595.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 7.9
50dbj|AK032524.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.9
51dbj|AK042722.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 7.9
52gb|AY241964.1| Dermacentor variabilis surfeit 4 protein mRNA, co... 40 7.9
53dbj|AK044872.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 7.9
54ref|NM_059168.1| Caenorhabditis elegans defective SPErmatogenesi... 40 7.9
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
56gb|AC009033.10| Homo sapiens chromosome 16 clone RP11-140I24, co... 40 7.9
57gb|AC153602.6| Mus musculus 6 BAC RP23-374K11 (Roswell Park Canc... 40 7.9
58gb|AC158655.4| Mus musculus BAC RP23-406J21 (Roswell Park Cance... 40 7.9
59gb|AF255566.1|F255566S01 Mus musculus adaptor-related protein co... 40 7.9
60emb|BX323547.4| Zebrafish DNA sequence from clone CH211-266N13 i... 40 7.9
61dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
62dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
63gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 7.9
64gb|AY104628.1| Zea mays PCO095216 mRNA sequence 40 7.9
65gb|AE003785.4| Drosophila melanogaster chromosome 2R, section 4 ... 40 7.9
66gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, co... 40 7.9
67emb|AL445236.22| Human DNA sequence from clone RP13-77O11 on chr... 40 7.9
68gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, comple... 40 7.9
69gb|AC132475.4| Mus musculus BAC clone RP23-114P16 from 3, comple... 40 7.9
70dbj|AP006683.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.9
71gb|U36483.1|CEU36483 Caenorhabditis elegans paternal-effect embr... 40 7.9 
>ref|XM_506722.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.19
           mRNA
          Length = 1679

 Score =  331 bits (167), Expect = 1e-87
 Identities = 330/381 (86%), Gaps = 5/381 (1%)
 Strand = Plus / Plus

                                                                       
Query: 130 ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
           |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 115 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 174

                                                                       
Query: 190 ctgcgaccgcgagctctgcagcttcgcccacggc-acggccgagctccgccggcccccct 248
           |||| |||||||   ||||||||||||||||||| ||||| ||  ||||||| || || |
Sbjct: 175 ctgcaaccgcgacacctgcagcttcgcccacggccacggc-gacatccgccgcccgccgt 233

                                                                       
Query: 249 cctcccggcccaccttcccgccccaccacgccgggagaagagattatacagggggtgatt 308
           |||||||   | ||||| ||| |||||   | |||||||||||||||| ||  |||||||
Sbjct: 234 cctcccgcggcgccttcacgcaccacc---cggggagaagagattatagagccggtgatt 290

                                                                       
Query: 309 tcagaggcaggattgaaaggaggttctcacctcgcaggagacattcccctggaagagatt 368
           |||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 291 tcagaggcaggattgataggaggttttcacctcggaggaggcattcccctggaagagagt 350

                                                                       
Query: 369 tcaggggtcatcgttcccttcatgatcgaaggccaacttctcgagaaagggagtctagct 428
            ||||||||||||| ||||| ||||| |||||||| ||||||||||||| || |||||||
Sbjct: 351 ccaggggtcatcgtcccctttatgatagaaggccatcttctcgagaaagagattctagct 410

                                                                       
Query: 429 tttcacggtctcccagcaggaagagtgagaggtggcatgaaaagaagatggatgatggag 488
            |||||| ||||| |||||||||||||||||| |||||||||||||||  || |||||||
Sbjct: 411 attcacgatctcctagcaggaagagtgagaggaggcatgaaaagaagactgacgatggag 470

                                
Query: 489 aaaccaactcatctaagagtt 509
           ||||||||||||||| |||||
Sbjct: 471 aaaccaactcatctaggagtt 491
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>ref|XM_464188.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1612

 Score =  331 bits (167), Expect = 1e-87
 Identities = 330/381 (86%), Gaps = 5/381 (1%)
 Strand = Plus / Plus

                                                                       
Query: 130 ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
           |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 117 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 176

                                                                       
Query: 190 ctgcgaccgcgagctctgcagcttcgcccacggc-acggccgagctccgccggcccccct 248
           |||| |||||||   ||||||||||||||||||| ||||| ||  ||||||| || || |
Sbjct: 177 ctgcaaccgcgacacctgcagcttcgcccacggccacggc-gacatccgccgcccgccgt 235

                                                                       
Query: 249 cctcccggcccaccttcccgccccaccacgccgggagaagagattatacagggggtgatt 308
           |||||||   | ||||| ||| |||||   | |||||||||||||||| ||  |||||||
Sbjct: 236 cctcccgcggcgccttcacgcaccacc---cggggagaagagattatagagccggtgatt 292

                                                                       
Query: 309 tcagaggcaggattgaaaggaggttctcacctcgcaggagacattcccctggaagagatt 368
           |||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 293 tcagaggcaggattgataggaggttttcacctcggaggaggcattcccctggaagagagt 352

                                                                       
Query: 369 tcaggggtcatcgttcccttcatgatcgaaggccaacttctcgagaaagggagtctagct 428
            ||||||||||||| ||||| ||||| |||||||| ||||||||||||| || |||||||
Sbjct: 353 ccaggggtcatcgtcccctttatgatagaaggccatcttctcgagaaagagattctagct 412

                                                                       
Query: 429 tttcacggtctcccagcaggaagagtgagaggtggcatgaaaagaagatggatgatggag 488
            |||||| ||||| |||||||||||||||||| |||||||||||||||  || |||||||
Sbjct: 413 attcacgatctcctagcaggaagagtgagaggaggcatgaaaagaagactgacgatggag 472

                                
Query: 489 aaaccaactcatctaagagtt 509
           ||||||||||||||| |||||
Sbjct: 473 aaaccaactcatctaggagtt 493
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>dbj|AK122103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125O22, full
           insert sequence
          Length = 1679

 Score =  331 bits (167), Expect = 1e-87
 Identities = 330/381 (86%), Gaps = 5/381 (1%)
 Strand = Plus / Plus

                                                                       
Query: 130 ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
           |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 115 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 174

                                                                       
Query: 190 ctgcgaccgcgagctctgcagcttcgcccacggc-acggccgagctccgccggcccccct 248
           |||| |||||||   ||||||||||||||||||| ||||| ||  ||||||| || || |
Sbjct: 175 ctgcaaccgcgacacctgcagcttcgcccacggccacggc-gacatccgccgcccgccgt 233

                                                                       
Query: 249 cctcccggcccaccttcccgccccaccacgccgggagaagagattatacagggggtgatt 308
           |||||||   | ||||| ||| |||||   | |||||||||||||||| ||  |||||||
Sbjct: 234 cctcccgcggcgccttcacgcaccacc---cggggagaagagattatagagccggtgatt 290

                                                                       
Query: 309 tcagaggcaggattgaaaggaggttctcacctcgcaggagacattcccctggaagagatt 368
           |||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 291 tcagaggcaggattgataggaggttttcacctcggaggaggcattcccctggaagagagt 350

                                                                       
Query: 369 tcaggggtcatcgttcccttcatgatcgaaggccaacttctcgagaaagggagtctagct 428
            ||||||||||||| ||||| ||||| |||||||| ||||||||||||| || |||||||
Sbjct: 351 ccaggggtcatcgtcccctttatgatagaaggccatcttctcgagaaagagattctagct 410

                                                                       
Query: 429 tttcacggtctcccagcaggaagagtgagaggtggcatgaaaagaagatggatgatggag 488
            |||||| ||||| |||||||||||||||||| |||||||||||||||  || |||||||
Sbjct: 411 attcacgatctcctagcaggaagagtgagaggaggcatgaaaagaagactgacgatggag 470

                                
Query: 489 aaaccaactcatctaagagtt 509
           ||||||||||||||| |||||
Sbjct: 471 aaaccaactcatctaggagtt 491
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>dbj|AK065198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E19, full
           insert sequence
          Length = 1612

 Score =  331 bits (167), Expect = 1e-87
 Identities = 330/381 (86%), Gaps = 5/381 (1%)
 Strand = Plus / Plus

                                                                       
Query: 130 ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
           |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 117 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 176

                                                                       
Query: 190 ctgcgaccgcgagctctgcagcttcgcccacggc-acggccgagctccgccggcccccct 248
           |||| |||||||   ||||||||||||||||||| ||||| ||  ||||||| || || |
Sbjct: 177 ctgcaaccgcgacacctgcagcttcgcccacggccacggc-gacatccgccgcccgccgt 235

                                                                       
Query: 249 cctcccggcccaccttcccgccccaccacgccgggagaagagattatacagggggtgatt 308
           |||||||   | ||||| ||| |||||   | |||||||||||||||| ||  |||||||
Sbjct: 236 cctcccgcggcgccttcacgcaccacc---cggggagaagagattatagagccggtgatt 292

                                                                       
Query: 309 tcagaggcaggattgaaaggaggttctcacctcgcaggagacattcccctggaagagatt 368
           |||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 293 tcagaggcaggattgataggaggttttcacctcggaggaggcattcccctggaagagagt 352

                                                                       
Query: 369 tcaggggtcatcgttcccttcatgatcgaaggccaacttctcgagaaagggagtctagct 428
            ||||||||||||| ||||| ||||| |||||||| ||||||||||||| || |||||||
Sbjct: 353 ccaggggtcatcgtcccctttatgatagaaggccatcttctcgagaaagagattctagct 412

                                                                       
Query: 429 tttcacggtctcccagcaggaagagtgagaggtggcatgaaaagaagatggatgatggag 488
            |||||| ||||| |||||||||||||||||| |||||||||||||||  || |||||||
Sbjct: 413 attcacgatctcctagcaggaagagtgagaggaggcatgaaaagaagactgacgatggag 472

                                
Query: 489 aaaccaactcatctaagagtt 509
           ||||||||||||||| |||||
Sbjct: 473 aaaccaactcatctaggagtt 493
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                           
Query: 281     gggagaagagattatacagggggtgatttcagaggcaggattgaaaggaggttctcacct 340
               |||||||||||||||| ||  ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 3298899 gggagaagagattatagagccggtgatttcagaggcaggattgataggaggttttcacct 3298958

                                                                           
Query: 341     cgcaggagacattcccctggaagagatttcaggggtcatcgttcccttcatgatcgaagg 400
               || ||||| ||||||||||||||||| | ||||||||||||| ||||| ||||| |||||
Sbjct: 3298959 cggaggaggcattcccctggaagagagtccaggggtcatcgtcccctttatgatagaagg 3299018

                                
Query: 401     ccaacttctcgagaaag 417
               ||| |||||||||||||
Sbjct: 3299019 ccatcttctcgagaaag 3299035



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                           
Query: 130     ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
               |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 3297342 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 3297401

                                                 
Query: 190     ctgcgaccgcgagctctgcagcttcgcccacggc 223
               |||| |||||||   |||||||||||||||||||
Sbjct: 3297402 ctgcaaccgcgacacctgcagcttcgcccacggc 3297435



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 452     agtgagaggtggcatgaaaagaagatggatgatggagaaaccaactcatctaagagtt 509
               ||||||||| |||||||||||||||  || |||||||||||||||||||||| |||||
Sbjct: 3299812 agtgagaggaggcatgaaaagaagactgacgatggagaaaccaactcatctaggagtt 3299869



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 422     tctagcttttcacggtctcccagcaggaagag 453
               ||||||| |||||| ||||| |||||||||||
Sbjct: 3299176 tctagctattcacgatctcctagcaggaagag 3299207
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>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1103G11
          Length = 182931

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                          
Query: 281    gggagaagagattatacagggggtgatttcagaggcaggattgaaaggaggttctcacct 340
              |||||||||||||||| ||  ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 171086 gggagaagagattatagagccggtgatttcagaggcaggattgataggaggttttcacct 171145

                                                                          
Query: 341    cgcaggagacattcccctggaagagatttcaggggtcatcgttcccttcatgatcgaagg 400
              || ||||| ||||||||||||||||| | ||||||||||||| ||||| ||||| |||||
Sbjct: 171146 cggaggaggcattcccctggaagagagtccaggggtcatcgtcccctttatgatagaagg 171205

                               
Query: 401    ccaacttctcgagaaag 417
              ||| |||||||||||||
Sbjct: 171206 ccatcttctcgagaaag 171222



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                          
Query: 130    ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
              |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 169529 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 169588

                                                
Query: 190    ctgcgaccgcgagctctgcagcttcgcccacggc 223
              |||| |||||||   |||||||||||||||||||
Sbjct: 169589 ctgcaaccgcgacacctgcagcttcgcccacggc 169622



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 452    agtgagaggtggcatgaaaagaagatggatgatggagaaaccaactcatctaagagtt 509
              ||||||||| |||||||||||||||  || |||||||||||||||||||||| |||||
Sbjct: 171999 agtgagaggaggcatgaaaagaagactgacgatggagaaaccaactcatctaggagtt 172056



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 422    tctagcttttcacggtctcccagcaggaagag 453
              ||||||| |||||| ||||| |||||||||||
Sbjct: 171363 tctagctattcacgatctcctagcaggaagag 171394
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>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_G05
          Length = 141860

 Score =  168 bits (85), Expect = 1e-38
 Identities = 124/137 (90%)
 Strand = Plus / Plus

                                                                         
Query: 281   gggagaagagattatacagggggtgatttcagaggcaggattgaaaggaggttctcacct 340
             |||||||||||||||| ||  ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 47759 gggagaagagattatagagccggtgatttcagaggcaggattgataggaggttttcacct 47818

                                                                         
Query: 341   cgcaggagacattcccctggaagagatttcaggggtcatcgttcccttcatgatcgaagg 400
             || ||||| ||||||||||||||||| | ||||||||||||| ||||| ||||| |||||
Sbjct: 47819 cggaggaggcattcccctggaagagagtccaggggtcatcgtcccctttatgatagaagg 47878

                              
Query: 401   ccaacttctcgagaaag 417
             ||| |||||||||||||
Sbjct: 47879 ccatcttctcgagaaag 47895



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                         
Query: 130   ccctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaa 189
             |||||| |||||||| |||||||||||||| ||| ||||||| |||||||||  ||||||
Sbjct: 46202 ccctcctcgccgcgggccggcgtacaagacgaagctgtgcgcgctgtggcagcgcggcaa 46261

                                               
Query: 190   ctgcgaccgcgagctctgcagcttcgcccacggc 223
             |||| |||||||   |||||||||||||||||||
Sbjct: 46262 ctgcaaccgcgacacctgcagcttcgcccacggc 46295



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 452   agtgagaggtggcatgaaaagaagatggatgatggagaaaccaactcatctaagagtt 509
             ||||||||| |||||||||||||||  || |||||||||||||||||||||| |||||
Sbjct: 48672 agtgagaggaggcatgaaaagaagactgacgatggagaaaccaactcatctaggagtt 48729



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 422   tctagcttttcacggtctcccagcaggaagag 453
             ||||||| |||||| ||||| |||||||||||
Sbjct: 48036 tctagctattcacgatctcctagcaggaagag 48067
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                            
Query: 131      cctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaac 190
                ||||| ||||||||||||||||||||||| ||| ||||||| ||||||  | | ||| | 
Sbjct: 28079703 cctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgag 28079644

                                                               
Query: 191      tgcgaccgcgagctctgcagcttcgcccacggcacggccgagctccg 237
                ||| ||||||    |||||||||||||||||||   |||||||||||
Sbjct: 28079643 tgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccg 28079597
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0547F09
          Length = 140615

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                          
Query: 131    cctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaac 190
              ||||| ||||||||||||||||||||||| ||| ||||||| ||||||  | | ||| | 
Sbjct: 124522 cctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgag 124463

                                                             
Query: 191    tgcgaccgcgagctctgcagcttcgcccacggcacggccgagctccg 237
              ||| ||||||    |||||||||||||||||||   |||||||||||
Sbjct: 124462 tgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccg 124416
to top
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                         
Query: 131   cctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaac 190
             ||||| ||||||||||||||||||||||| ||| ||||||| ||||||  | | ||| | 
Sbjct: 10609 cctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgag 10550

                                                            
Query: 191   tgcgaccgcgagctctgcagcttcgcccacggcacggccgagctccg 237
             ||| ||||||    |||||||||||||||||||   |||||||||||
Sbjct: 10549 tgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccg 10503
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>dbj|AK064816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E13, full
           insert sequence
          Length = 3224

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 131 cctccgcgccgcggcccggcgtacaagaccaagatgtgcgccctgtggcagaacggcaac 190
           ||||| ||||||||||||||||||||||| ||| ||||||| ||||||  | | ||| | 
Sbjct: 130 cctccccgccgcggcccggcgtacaagacgaagctgtgcgcgctgtggaggcaaggcgag 189

                                                          
Query: 191 tgcgaccgcgagctctgcagcttcgcccacggcacggccgagctccg 237
           ||| ||||||    |||||||||||||||||||   |||||||||||
Sbjct: 190 tgcaaccgcgcctcctgcagcttcgcccacggcgacgccgagctccg 236
to top
>gb|BT018664.1| Zea mays clone EL01N0510A02.d mRNA sequence
          Length = 1673

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 139 ccgcggcccggcgtacaagaccaagatgtgcgc 171
           ||||||||||||||||||||| ||| |||||||
Sbjct: 123 ccgcggcccggcgtacaagacgaagctgtgcgc 155
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>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence
          Length = 173474

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 342    gcaggagacattcccctggaagag 365
              ||||||||||||||||||||||||
Sbjct: 143639 gcaggagacattcccctggaagag 143616
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>emb|CR354000.1| Gallus gallus finished cDNA, clone ChEST598l12
          Length = 615

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 cccctccgcgccgcggcccggc 150
           ||||||||||||||||||||||
Sbjct: 160 cccctccgcgccgcggcccggc 181
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>emb|BX932347.1| Gallus gallus finished cDNA, clone ChEST357c8
          Length = 746

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 129 cccctccgcgccgcggcccggc 150
           ||||||||||||||||||||||
Sbjct: 131 cccctccgcgccgcggcccggc 110
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>ref|XM_480838.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 243 ccccctcctcccggcccacct 263
           |||||||||||||||||||||
Sbjct: 349 ccccctcctcccggcccacct 329
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>gb|AC091543.2| Felis catus clone RP86-588L5, complete sequence
          Length = 166752

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 522   ataataatgataggaaaaaggaaaa 546
             |||||||| ||||||||||||||||
Sbjct: 35724 ataataataataggaaaaaggaaaa 35748
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>gb|AY245373.1| Iris fulva clone FR3-6 IRRE retrotransposon, partial sequence
          Length = 5132

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 533  aggaaaaaggaaaaagtaact 553
            |||||||||||||||||||||
Sbjct: 1442 aggaaaaaggaaaaagtaact 1422
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>gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 533    aggaaaaaggaaaaagtaactagtg 557
              |||| ||||||||||||||||||||
Sbjct: 132378 aggataaaggaaaaagtaactagtg 132354
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 243     ccccctcctcccggcccacct 263
               |||||||||||||||||||||
Sbjct: 8129622 ccccctcctcccggcccacct 8129642



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 480      atgatggagaaaccaactca 499
                ||||||||||||||||||||
Sbjct: 27529086 atgatggagaaaccaactca 27529067
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>gb|AY953408.1| Uncultured sulfate-reducing bacterium clone VO5 dissimilatory
           sulfite reductase subunit A (dsrA) and dissimilatory
           sulfite reductase subunit B (dsrB) genes, partial cds
          Length = 1792

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 373 gggtcatcgttcccttcatga 393
           |||||||||||||||||||||
Sbjct: 788 gggtcatcgttcccttcatga 808
to top
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1047A05
          Length = 157517

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   ccccctcctcccggcccacct 263
             |||||||||||||||||||||
Sbjct: 97933 ccccctcctcccggcccacct 97953
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 207     gcagcttcgcccacggcacggccg 230
               |||||||||||||| |||||||||
Sbjct: 2991776 gcagcttcgcccactgcacggccg 2991799
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>gb|AC009847.9| Drosophila melanogaster clone BACR03L10, complete sequence
          Length = 180498

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   tgcgaccgcgagctctgcag 210
             ||||||||||||||||||||
Sbjct: 69238 tgcgaccgcgagctctgcag 69219
to top
>gb|BC015068.1| Mus musculus adaptor-related protein complex 3, beta 1 subunit,
           mRNA (cDNA clone MGC:13703 IMAGE:4018563), complete cds
          Length = 4038

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 203 ccgagctccgccgcctcccctcctcccg 176
to top
>ref|NM_009680.2| Mus musculus adaptor-related protein complex 3, beta 1 subunit
           (Ap3b1), mRNA
          Length = 3956

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 143 ccgagctccgccgcctcccctcctcccg 116
to top
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene
             region
          Length = 65993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   atgatggagaaaccaactca 499
             ||||||||||||||||||||
Sbjct: 34103 atgatggagaaaccaactca 34084
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>gb|AC135950.1| Homo sapiens chromosome 16 clone CTD-2413I9, complete sequence
          Length = 99018

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 36    ctcccgacc-caggtgctccgcctacct 62
             ||||||||| ||||||||||||||||||
Sbjct: 71391 ctcccgacctcaggtgctccgcctacct 71364
to top
>gb|AC126022.4| Mus musculus BAC clone RP24-405F4 from chromosome 16, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   gaaagggagtctagcttttc 432
             ||||||||||||||||||||
Sbjct: 97479 gaaagggagtctagcttttc 97498
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>gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome 13, complete sequence
          Length = 192969

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 228   ccgagctccgccggcccccctcctcccg 255
             ||||||||||||| | ||||||||||||
Sbjct: 38363 ccgagctccgccgcctcccctcctcccg 38336
to top
>gb|BC057103.1| Mus musculus calcium/calmodulin-dependent protein kinase II, delta,
           mRNA (cDNA clone IMAGE:6401453), partial cds
          Length = 3009

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 224 atcccttgtcctctcctcctcccg 201
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>gb|U97015.1| Caenorhabditis elegans cosmid F48C1, complete sequence
          Length = 30783

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 460   gtggcatgaaaagaagatggatga 483
             ||||| ||||||||||||||||||
Sbjct: 20877 gtggcttgaaaagaagatggatga 20854
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>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains
            the 3' end of the KCNN3 gene for potassium
            intermediate/small conductance calcium-activated channel,
            subfamily N, member 3, a novel gene and the 5' end of the
            ADAR gene for adenosine deaminase, RNA-specific, complete
            sequence
          Length = 173014

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  gtggcatgaaaagaagatgg 479
            ||||||||||||||||||||
Sbjct: 5255 gtggcatgaaaagaagatgg 5274
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>emb|AL512271.10| Human DNA sequence from clone RP11-74K19 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 132920

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 533    aggaaaaaggaaaaagtaac 552
              ||||||||||||||||||||
Sbjct: 113902 aggaaaaaggaaaaagtaac 113921
to top
>ref|NM_023813.3| Mus musculus calcium/calmodulin-dependent protein kinase II, delta
           (Camk2d), transcript variant 3, mRNA
          Length = 4197

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 286 atcccttgtcctctcctcctcccg 263
to top
>ref|NM_001025438.1| Mus musculus calcium/calmodulin-dependent protein kinase II, delta
           (Camk2d), transcript variant 2, mRNA
          Length = 4286

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 286 atcccttgtcctctcctcctcccg 263
to top
>ref|NM_001025439.1| Mus musculus calcium/calmodulin-dependent protein kinase II, delta
           (Camk2d), transcript variant 1, mRNA
          Length = 4299

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 286 atcccttgtcctctcctcctcccg 263
to top
>gb|AC121118.6| Mus musculus, clone RP23-385E21, complete sequence
          Length = 202500

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     atcccttgtccgctcctcctcccg 41
              ||||||||||| ||||||||||||
Sbjct: 166622 atcccttgtcctctcctcctcccg 166599
to top
>gb|AC164250.4| Mus musculus  BAC RP24-327O15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 221612

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 159    ccaagatgtgcgccctgtggcaga 182
              |||||||||| |||||||||||||
Sbjct: 165629 ccaagatgtgagccctgtggcaga 165652
to top
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   catgaaaagaagatggatga 483
             ||||||||||||||||||||
Sbjct: 86686 catgaaaagaagatggatga 86667
to top
>dbj|AK220516.1| Mus musculus mRNA for mKIAA4163 protein
          Length = 4180

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 308 atcccttgtcctctcctcctcccg 285
to top
>dbj|AK145106.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830045H04
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 3180

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 239 atcccttgtcctctcctcctcccg 216
to top
>dbj|AK142435.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530006I24
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 1959

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 251 atcccttgtcctctcctcctcccg 228
to top
>dbj|AK143559.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F420001M07 product:adaptor-related
           protein complex 3, beta 1 subunit, full insert sequence
          Length = 2572

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 202 ccgagctccgccgcctcccctcctcccg 175
to top
>dbj|AK157736.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130010E01
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 2328

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 250 atcccttgtcctctcctcctcccg 227
to top
>gb|AF103809.2|AF103809 Mus musculus Ap-3 complex beta3A subunit (Ap3b1) mRNA, complete cds
          Length = 3956

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 143 ccgagctccgccgcctcccctcctcccg 116
to top
>dbj|AK163957.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330005L04 product:adaptor-related protein complex
           3, beta 1 subunit, full insert sequence
          Length = 2080

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 144 ccgagctccgccgcctcccctcctcccg 117
to top
>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence
          Length = 202765

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 527   aatgataggaaaaaggaaaa 546
             ||||||||||||||||||||
Sbjct: 35861 aatgataggaaaaaggaaaa 35880
to top
>dbj|AK171595.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730316N07
           product:adaptor-related protein complex 3, beta 1
           subunit, full insert sequence
          Length = 2141

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 207 ccgagctccgccgcctcccctcctcccg 180
to top
>dbj|AK032524.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430579P05
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 4207

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 255 atcccttgtcctctcctcctcccg 232
to top
>dbj|AK042722.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730018N16
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 966

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 250 atcccttgtcctctcctcctcccg 227
to top
>gb|AY241964.1| Dermacentor variabilis surfeit 4 protein mRNA, complete cds
          Length = 1171

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 tacaagaccaagatgtgcgccctg 175
           |||||||||||| |||||||||||
Sbjct: 638 tacaagaccaagctgtgcgccctg 661
to top
>dbj|AK044872.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130009G18
           product:calcium/calmodulin-dependent protein kinase II,
           delta, full insert sequence
          Length = 2709

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  atcccttgtccgctcctcctcccg 41
           ||||||||||| ||||||||||||
Sbjct: 250 atcccttgtcctctcctcctcccg 227
to top
>ref|NM_059168.1| Caenorhabditis elegans defective SPErmatogenesis family member
           (spe-11) (spe-11) mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 460 gtggcatgaaaagaagatggatga 483
           ||||| ||||||||||||||||||
Sbjct: 732 gtggcttgaaaagaagatggatga 755
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 464      catgaaaagaagatggatga 483
                ||||||||||||||||||||
Sbjct: 31104605 catgaaaagaagatggatga 31104586
to top
>gb|AC009033.10| Homo sapiens chromosome 16 clone RP11-140I24, complete sequence
          Length = 158628

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 36     ctcccgacc-caggtgctccgcctacct 62
              ||||||||| ||||||||||||||||||
Sbjct: 146228 ctcccgacctcaggtgctccgcctacct 146201
to top
>gb|AC153602.6| Mus musculus 6 BAC RP23-374K11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194925

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 127    gccccctccgcgccgcggcccggc 150
              |||||||||||||||| |||||||
Sbjct: 159590 gccccctccgcgccgccgcccggc 159613
to top
>gb|AC158655.4| Mus musculus  BAC RP23-406J21 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 201519

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 127  gccccctccgcgccgcggcccggc 150
            |||||||||||||||| |||||||
Sbjct: 7838 gccccctccgcgccgccgcccggc 7861
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>gb|AF255566.1|F255566S01 Mus musculus adaptor-related protein complex AP-3 beta 1 subunit
           (Ap3b1) gene, exon 1
          Length = 1098

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 228 ccgagctccgccggcccccctcctcccg 255
           ||||||||||||| | ||||||||||||
Sbjct: 885 ccgagctccgccgcctcccctcctcccg 858
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>emb|BX323547.4| Zebrafish DNA sequence from clone CH211-266N13 in linkage group 16,
             complete sequence
          Length = 96492

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   aaaagaagatggatgatgga 487
             ||||||||||||||||||||
Sbjct: 27483 aaaagaagatggatgatgga 27502
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>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   atgatggagaaaccaactca 499
             ||||||||||||||||||||
Sbjct: 11376 atgatggagaaaccaactca 11357
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>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_E06
          Length = 95069

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   atgatggagaaaccaactca 499
             ||||||||||||||||||||
Sbjct: 92335 atgatggagaaaccaactca 92316
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     cagaacggcaactgcgaccg 198
               ||||||||||||||||||||
Sbjct: 3074348 cagaacggcaactgcgaccg 3074367
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>gb|AY104628.1| Zea mays PCO095216 mRNA sequence
          Length = 1671

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  tggcatgaaaagaagatgga 480
            ||||||||||||||||||||
Sbjct: 1420 tggcatgaaaagaagatgga 1401
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>gb|AE003785.4| Drosophila melanogaster chromosome 2R, section 4 of 73 of the complete
              sequence
          Length = 301132

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    tgcgaccgcgagctctgcag 210
              ||||||||||||||||||||
Sbjct: 263724 tgcgaccgcgagctctgcag 263743
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>gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, complete sequence
          Length = 253469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     atcccttgtccgctcctcctcccg 41
              ||||||||||| ||||||||||||
Sbjct: 185264 atcccttgtcctctcctcctcccg 185287
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>emb|AL445236.22| Human DNA sequence from clone RP13-77O11 on chromosome Xp11.21-11.3
             Contains the 5' end of a novel gene (FLJ33130, FLJ35046,
             FLJ34279, FLJ38843, DKFZp667C0711), the PLAC6 gene for
             placenta-specific 6, a eukaryotic translation initiation
             factor 4A (EIF4A2) pseudogene, a GAGE family pseudogene, a
             novel protein similar to the GAGE family, a pseudogene
             similar to part of G antigen protein, a novel gene, a SSX
             family pseudogene, a S100 family pseudogene, the 3' end of
             a novel protein similar to the SSX family and two CpG
             islands, complete sequence
          Length = 149749

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   ataggaaaaaggaaaaagta 550
             ||||||||||||||||||||
Sbjct: 45405 ataggaaaaaggaaaaagta 45386
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>gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, complete sequence
          Length = 185517

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 159    ccaagatgtgcgccctgtggcaga 182
              |||||||||| |||||||||||||
Sbjct: 142733 ccaagatgtgagccctgtggcaga 142710
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>gb|AC132475.4| Mus musculus BAC clone RP23-114P16 from 3, complete sequence
          Length = 215899

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    aatgataggaaaaaggaaaa 546
              ||||||||||||||||||||
Sbjct: 179815 aatgataggaaaaaggaaaa 179834
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>dbj|AP006683.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39I02, TM0377b,
             complete sequence
          Length = 53203

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 517   ctctgataataatgataggaaaaa 540
             ||||||||| ||||||||||||||
Sbjct: 49986 ctctgataagaatgataggaaaaa 50009
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>gb|U36483.1|CEU36483 Caenorhabditis elegans paternal-effect embryonic-lethal (spe-11)
            gene, complete cds
          Length = 1991

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 460  gtggcatgaaaagaagatggatga 483
            ||||| ||||||||||||||||||
Sbjct: 1573 gtggcttgaaaagaagatggatga 1596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,291,536
Number of Sequences: 3902068
Number of extensions: 5291536
Number of successful extensions: 137631
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 137200
Number of HSP's gapped (non-prelim): 433
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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