Clone Name | bart43a01 |
---|---|
Clone Library Name | barley_pub |
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 36.6 bits (83), Expect = 0.047 Identities = 30/110 (27%), Positives = 39/110 (35%) Frame = +1 Query: 121 ATPLEWPLASPRFTGLHHPGRRPACCSTTRGTLCQRRGADGPVELLAQLSKTXXXXXXXX 300 +TP P ++P + G R T RGT + A P+ + A ++ Sbjct: 839 STPSPVPPSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITA 898 Query: 301 XXXXXXXXXDEEAPVYAFMARAPIAEGRCIPSPKLAAEAPTATVSCPGVG 450 APV A AP A PSP AA A A VS G Sbjct: 899 TAATITTTMVAAAPVAVAAAAAPAA--AAAPSPATAA-ATAAAVSPAAAG 945
>GCH1_CHICK (P50141) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 236 Score = 31.6 bits (70), Expect = 1.5 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 391 PSPKLAAEAPTATVSCPGVGDGRRGE 468 PSPKL E P + G GDG RGE Sbjct: 17 PSPKLGTEKPRVSAGSGGSGDGWRGE 42
>NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090)| Length = 235 Score = 30.0 bits (66), Expect = 4.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 134 SGHWPAQGSPGSIIPADGXXXXXXXXXLCASGGAPMGQ 247 SG+W A GSPG + D + +G AP G+ Sbjct: 89 SGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGR 126
>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1302 Score = 24.6 bits (52), Expect(2) = 5.3 Identities = 26/105 (24%), Positives = 31/105 (29%) Frame = +3 Query: 126 SIGVAIGQPKVHRAPSSRPTAGVL*HDAWHFVPXXXXXXXXXXXXPVVEDVPECSSPRGE 305 SIG A GQ K H+ P + T V +D+ EC+ P Sbjct: 305 SIGTAWGQSKCHKCPQLQYTGVQKPGPVRGEVGADCPQGYKRLNSTHCQDINECAMP--- 361 Query: 306 A*PEXXXXXXXXXXXXHGACTNRRGQVHPEPKACCRSPNGHCLVP 440 HG C N G C P GH L P Sbjct: 362 ------------GVCRHGDCLNNPGSYR------CVCPPGHSLGP 388 Score = 23.5 bits (49), Expect(2) = 5.3 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +2 Query: 11 PPPNSTVGHCL--TDARSKAPAQHLPPLKKFLH 103 PP S H + ++A S AP+QHL P K H Sbjct: 234 PPEASVQVHRIESSNAESAAPSQHLLPHPKPSH 266
>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| (hNotch4) [Contains: Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 2003 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 100 PRRCVPGATPLEWPLASPRFTGLHHPGRRPACCSTTRGTLCQRRGADG 243 P+ C P +P + + TGL PG R +C ++ G CQ+ GA G Sbjct: 1131 PKGCGP-PSPCLYNGSCSETTGLGGPGFRCSCPHSSPGPRCQKPGAKG 1177
>NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (ANAC061)| Length = 228 Score = 29.6 bits (65), Expect = 5.8 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 134 SGHWPAQGSPGSIIPADGXXXXXXXXXLCASGGAPMGQ 247 SG+W A GSPG + D + +G AP G+ Sbjct: 88 SGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 125
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 29.3 bits (64), Expect = 7.6 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 Query: 114 PGSNSIGVAIGQPKVHRAPSSRP 182 PGSNS+G +G P R PS P Sbjct: 295 PGSNSLGYQLGPPATPRCPSPGP 317
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +1 Query: 376 EGRCIPSPKLAAE---APTATVSCPGVGDGRRG 465 +GR +P+P+ A APT+T +G+GR G Sbjct: 229 QGRVLPTPQTVAPPATAPTSTTKTANLGEGRAG 261
>LECF_ALEAU (P18891) Fucose-specific lectin (Aleuria aurantia lectin) (AAL)| Length = 312 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 104 AGASREQLHWSGHWPAQGSPGSIIPADG 187 +G+S + WSG W A S GS +P G Sbjct: 140 SGSSIHEYVWSGKWTAGASFGSTVPGTG 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,450,882 Number of Sequences: 219361 Number of extensions: 1594856 Number of successful extensions: 5061 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4726 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5047 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)