ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart43a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
4ref|XM_323275.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.12
5ref|XM_952503.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.12
6gb|AY576487.1| Neurospora crassa COQ7 mRNA, complete cds 46 0.12
7emb|BX908812.1| Neurospora crassa DNA linkage group VI Cosmid co... 46 0.12
8ref|XM_468872.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.47
10gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, comple... 44 0.47
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
12gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genom... 44 0.47
13gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.9
14gb|AC157791.6| Mus musculus chromosome 3, clone RP24-176D22, com... 42 1.9
15gb|AC116732.10| Mus musculus chromosome 3, clone RP23-347F4, com... 42 1.9
16dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.9
17gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, co... 40 7.4
18ref|XM_462810.2| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
19ref|XM_512055.1| PREDICTED: Pan troglodytes similar to alpha/bet... 40 7.4
20ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative... 40 7.4
21gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 40 7.4
22ref|XM_426659.1| PREDICTED: Gallus gallus similar to doublesex-m... 40 7.4
23ref|XM_958787.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.4
24ref|XM_328826.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.4
25gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, compl... 40 7.4
26gb|AY554036.1| Oryza sativa (japonica cultivar-group) clone S180... 40 7.4
27emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in ... 40 7.4
28gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide comple... 40 7.4
29gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome... 40 7.4
30ref|XM_643702.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 7.4
31gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete seq... 40 7.4
32gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain ... 40 7.4
33emb|AL831755.9| Human DNA sequence from clone RP13-279N23 on chr... 40 7.4
34emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.4
35emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 7.4
36gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, com... 40 7.4
37dbj|AK091706.1| Homo sapiens cDNA FLJ34387 fis, clone HCHON10001... 40 7.4
38gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 40 7.4
39gb|AY328852.1| Vibrio parahaemolyticus phage VP16T, partial sequ... 40 7.4
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
43dbj|AB200238.1| Oryza sativa (japonica cultivar-group) CRLL4 mRN... 40 7.4
44dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
45dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.4
46dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
47dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
48gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, com... 40 7.4
49dbj|AK105527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
50tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 7.4
51dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
52gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
53gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome ... 40 7.4
54dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 7.4 
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 187    ccggcgtgctgtagcacgacgcgt 210
              ||||||||||||||||||||||||
Sbjct: 125640 ccggcgtgctgtagcacgacgcgt 125663
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 187      ccggcgtgctgtagcacgacgcgt 210
                ||||||||||||||||||||||||
Sbjct: 13992803 ccggcgtgctgtagcacgacgcgt 13992826
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 187      ccggcgtgctgtagcacgacgcgt 210
                ||||||||||||||||||||||||
Sbjct: 14074805 ccggcgtgctgtagcacgacgcgt 14074828
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>ref|XM_323275.1| Neurospora crassa OR74A hypothetical protein (NCU03957.1) partial
           mRNA
          Length = 771

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 4   agcaccaccaccaccaaactcca 26
           |||||||||||||||||||||||
Sbjct: 144 agcaccaccaccaccaaactcca 166
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>ref|XM_952503.1| Neurospora crassa OR74A hypothetical protein (NCU03957.1) partial
           mRNA
          Length = 771

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 4   agcaccaccaccaccaaactcca 26
           |||||||||||||||||||||||
Sbjct: 144 agcaccaccaccaccaaactcca 166
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>gb|AY576487.1| Neurospora crassa COQ7 mRNA, complete cds
          Length = 771

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 4   agcaccaccaccaccaaactcca 26
           |||||||||||||||||||||||
Sbjct: 144 agcaccaccaccaccaaactcca 166
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>emb|BX908812.1| Neurospora crassa DNA linkage group VI Cosmid contig G17A4
          Length = 134053

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 4     agcaccaccaccaccaaactcca 26
             |||||||||||||||||||||||
Sbjct: 46025 agcaccaccaccaccaaactcca 46003
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>ref|XM_468872.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 4   agcaccaccaccaccaaactcc 25
           ||||||||||||||||||||||
Sbjct: 611 agcaccaccaccaccaaactcc 632
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 4        agcaccaccaccaccaaactcc 25
                ||||||||||||||||||||||
Sbjct: 18905773 agcaccaccaccaccaaactcc 18905752
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>gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, complete sequence
          Length = 194612

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 520   tcctggacctcgtagtttagtggaag 545
             |||||||||| |||||||||||||||
Sbjct: 82595 tcctggacctagtagtttagtggaag 82570
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 4        agcaccaccaccaccaaactcc 25
                ||||||||||||||||||||||
Sbjct: 18899814 agcaccaccaccaccaaactcc 18899793
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>gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genomic sequence, complete
             sequence
          Length = 168859

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 4     agcaccaccaccaccaaactcc 25
             ||||||||||||||||||||||
Sbjct: 93868 agcaccaccaccaccaaactcc 93889
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 292     gcccgcgcggggaggcgtagc 312
               |||||||||||||||||||||
Sbjct: 2492742 gcccgcgcggggaggcgtagc 2492722
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>gb|AC157791.6| Mus musculus chromosome 3, clone RP24-176D22, complete sequence
          Length = 179897

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     caccaccaccaccaaactcca 26
             |||||||||||||||||||||
Sbjct: 89048 caccaccaccaccaaactcca 89068
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>gb|AC116732.10| Mus musculus chromosome 3, clone RP23-347F4, complete sequence
          Length = 187006

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      caccaccaccaccaaactcca 26
              |||||||||||||||||||||
Sbjct: 167770 caccaccaccaccaaactcca 167790
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 295     cgcgcggggaggcgtagcccg 315
               |||||||||||||||||||||
Sbjct: 4356564 cgcgcggggaggcgtagcccg 4356544
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>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence
          Length = 167248

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    ctccattggagtggccattggcca 148
              ||||| ||||||||||||||||||
Sbjct: 100436 ctccagtggagtggccattggcca 100459
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>ref|XM_462810.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1324

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   attagcaccaccaccaccaa 20
           ||||||||||||||||||||
Sbjct: 974 attagcaccaccaccaccaa 993
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>ref|XM_512055.1| PREDICTED: Pan troglodytes similar to alpha/beta hydrolase domain
           containing protein 3; lung alpha/beta hydrolase 3
           (LOC455330), mRNA
          Length = 1863

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 gggaggcgtagcccgaggct 320
           ||||||||||||||||||||
Sbjct: 312 gggaggcgtagcccgaggct 293
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>ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine
           zipper protein (OSJNBa0095C06.14), mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   caccaccaccaccaaactcc 25
           ||||||||||||||||||||
Sbjct: 631 caccaccaccaccaaactcc 650
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>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     caccaccaccaccaaactcc 25
             ||||||||||||||||||||
Sbjct: 48227 caccaccaccaccaaactcc 48208
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>ref|XM_426659.1| PREDICTED: Gallus gallus similar to doublesex-mab-3 (DM) domain
           (LOC429103), mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 gcagcccgcgcggggaggcg 308
           ||||||||||||||||||||
Sbjct: 289 gcagcccgcgcggggaggcg 270
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>ref|XM_958787.1| Neurospora crassa OR74A hypothetical protein (NCU08121.1) partial
          mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  caccaccaccaccaaactcc 25
          ||||||||||||||||||||
Sbjct: 21 caccaccaccaccaaactcc 40
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>ref|XM_328826.1| Neurospora crassa OR74A hypothetical protein (NCU08121.1) partial
          mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  caccaccaccaccaaactcc 25
          ||||||||||||||||||||
Sbjct: 21 caccaccaccaccaaactcc 40
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>gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, complete sequence
          Length = 181897

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    ctccattggagtggccattggcca 148
              ||||| ||||||||||||||||||
Sbjct: 143754 ctccagtggagtggccattggcca 143731
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>gb|AY554036.1| Oryza sativa (japonica cultivar-group) clone S1802
           homeodomain-leucine zipper Hox8-like mRNA, partial
           sequence
          Length = 829

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   caccaccaccaccaaactcc 25
           ||||||||||||||||||||
Sbjct: 380 caccaccaccaccaaactcc 399
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>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22,
             complete sequence
          Length = 122651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   tgcagaagccccaacggcca 427
             ||||||||||||||||||||
Sbjct: 68594 tgcagaagccccaacggcca 68613
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>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene
            cluster, complete sequence
          Length = 138203

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 503  gcgcgggctcgacctcctcctgga 526
            ||||||||||||||||| ||||||
Sbjct: 2933 gcgcgggctcgacctccacctgga 2910
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>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence
          Length = 184359

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      caccaccaccaccaaactcc 25
              ||||||||||||||||||||
Sbjct: 125477 caccaccaccaccaaactcc 125496
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>ref|XM_643702.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (391.t00003) partial mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  cccaaagcttgctgcagaag 415
            ||||||||||||||||||||
Sbjct: 1479 cccaaagcttgctgcagaag 1498
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>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence
          Length = 121295

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    accaccaccaaactccaccg 29
             ||||||||||||||||||||
Sbjct: 79163 accaccaccaaactccaccg 79144
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>gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain leucine-zipper
           protein Hox8 mRNA, complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   caccaccaccaccaaactcc 25
           ||||||||||||||||||||
Sbjct: 823 caccaccaccaccaaactcc 842
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>emb|AL831755.9| Human DNA sequence from clone RP13-279N23 on chromosome 1 Conatains the
             3' end of the TAS1R2 gene for taste receptor, type 1,
             member 2, complete sequence
          Length = 91841

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ttagcaccaccaccaccaaa 21
             ||||||||||||||||||||
Sbjct: 36538 ttagcaccaccaccaccaaa 36557
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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    cgaggtcgaaggccccggcg 70
             ||||||||||||||||||||
Sbjct: 62533 cgaggtcgaaggccccggcg 62514
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    cgacctcctcctggacctcg 531
              ||||||||||||||||||||
Sbjct: 274077 cgacctcctcctggacctcg 274058
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>gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, complete sequence
          Length = 220747

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    ctccattggagtggccattggcca 148
              ||||| ||||||||||||||||||
Sbjct: 149908 ctccagtggagtggccattggcca 149931
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>dbj|AK091706.1| Homo sapiens cDNA FLJ34387 fis, clone HCHON1000191, highly similar
           to INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 3
           PRECURSOR
          Length = 2242

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                          
Query: 482 gctccgcgggcaacgccggtggcgcgggctc 512
           |||||||||||  ||||||||||||||||||
Sbjct: 186 gctccgcgggc--cgccggtggcgcgggctc 214
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>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare clone OSJNBa0095C06, from Chromosome 10,
              complete sequence
          Length = 156159

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      caccaccaccaccaaactcc 25
              ||||||||||||||||||||
Sbjct: 110954 caccaccaccaccaaactcc 110973
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>gb|AY328852.1| Vibrio parahaemolyticus phage VP16T, partial sequence
          Length = 49575

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ggcgtgctgtagcacgacgc 208
             ||||||||||||||||||||
Sbjct: 15254 ggcgtgctgtagcacgacgc 15235
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        caccaccaccaccaaactcc 25
                ||||||||||||||||||||
Sbjct: 11526961 caccaccaccaccaaactcc 11526980
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 280     ccgagtgcagcagcccgcgc 299
               ||||||||||||||||||||
Sbjct: 7769965 ccgagtgcagcagcccgcgc 7769946
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       attagcaccaccaccaccaa 20
               ||||||||||||||||||||
Sbjct: 3550506 attagcaccaccaccaccaa 3550487
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>dbj|AB200238.1| Oryza sativa (japonica cultivar-group) CRLL4 mRNA for LOB domain
           protein, complete cds
          Length = 756

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   attagcaccaccaccaccaa 20
           ||||||||||||||||||||
Sbjct: 679 attagcaccaccaccaccaa 698
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>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1276_B06
          Length = 175174

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      attagcaccaccaccaccaa 20
              ||||||||||||||||||||
Sbjct: 118574 attagcaccaccaccaccaa 118555
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 502     ggcgcgggctcgacctcctc 521
               ||||||||||||||||||||
Sbjct: 3974025 ggcgcgggctcgacctcctc 3974006
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>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1077_A12
          Length = 149089

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    ccgagtgcagcagcccgcgc 299
              ||||||||||||||||||||
Sbjct: 106230 ccgagtgcagcagcccgcgc 106211
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>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006L10
          Length = 171115

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   ccgagtgcagcagcccgcgc 299
             ||||||||||||||||||||
Sbjct: 10328 ccgagtgcagcagcccgcgc 10309
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>gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, complete sequence
          Length = 233171

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   agcccaaagcttgctgcaga 413
             ||||||||||||||||||||
Sbjct: 85892 agcccaaagcttgctgcaga 85911
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>dbj|AK105527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G05, full
           insert sequence
          Length = 1324

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   attagcaccaccaccaccaa 20
           ||||||||||||||||||||
Sbjct: 974 attagcaccaccaccaccaa 993
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>tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx25 gene for
           class III peroxidase 25 precursor, exon 1
          Length = 1017

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 ccgagtgcagcagcccgcgc 299
           ||||||||||||||||||||
Sbjct: 829 ccgagtgcagcagcccgcgc 810
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0028E10
          Length = 140791

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      attagcaccaccaccaccaa 20
              ||||||||||||||||||||
Sbjct: 137266 attagcaccaccaccaccaa 137247
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        caccaccaccaccaaactcc 25
                ||||||||||||||||||||
Sbjct: 11533401 caccaccaccaccaaactcc 11533420
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>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence
          Length = 247216

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      caccaccaccaccaaactcc 25
              ||||||||||||||||||||
Sbjct: 128492 caccaccaccaccaaactcc 128511
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>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1
          Length = 186421

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 517   tcctcctggacctcgtagtttagtggaa 544
             ||||||||||||| ||||||| ||||||
Sbjct: 93566 tcctcctggaccttgtagttttgtggaa 93539


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,791,783
Number of Sequences: 3902068
Number of extensions: 3791783
Number of successful extensions: 199124
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 198092
Number of HSP's gapped (non-prelim): 1033
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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