ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42h01 |
|---|---|
| Clone Library Name | barley_pub |
>WS17_SCHMA (Q26544) WD-repeat protein SL1-17| Length = 301 Score = 57.4 bits (137), Expect = 3e-08 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXX 282 AH++ IW W + R ++TGS+D + AW+ + GH LGV+S+ Sbjct: 11 AHKEGIWCCTWGENRN-RNKQYIITGSLDNGLIAWEWTNSQLKCLYQFEGHRLGVISVDI 69 Query: 283 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 S+DS I ++D+++G T D P++ W + F P Sbjct: 70 NSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTIAFSP 113 Score = 36.6 bits (83), Expect = 0.046 Identities = 20/84 (23%), Positives = 36/84 (42%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 LL + S D+ ++ + D + P GH VVS+ S D +R++D+ Sbjct: 200 LLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLVTASTDCSVRIWDLA 259 Query: 349 SGASVTTLDAAPSEVWGVQFHPKG 420 S + +VW ++ P+G Sbjct: 260 SKEEKHCFNTHEDQVWCARYSPQG 283
>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1| Length = 1356 Score = 50.8 bits (120), Expect = 2e-06 Identities = 34/122 (27%), Positives = 49/122 (40%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H DS+W+ A+ P + +GSID T++ W + GH V S+ Sbjct: 1092 HGDSVWSVAFSPDGQR-----VASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSP 1145 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 SID I+++D SG TL+ V V F P G +K+W Sbjct: 1146 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDG-QRVASGSSDKTIKIW 1204 Query: 469 DT 474 DT Sbjct: 1205 DT 1206 Score = 47.0 bits (110), Expect = 3e-05 Identities = 31/121 (25%), Positives = 47/121 (38%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H S+W+ A+ P + +GS D+T++ W + GH V S+ Sbjct: 1008 HGGSVWSVAFSPDGQR-----VASGSDDKTIKIWDTAS-GTCTQTLEGHGGWVQSVVFSP 1061 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D I+++D SG TL+ VW V F P G +K+W Sbjct: 1062 DGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDG-QRVASGSIDGTIKIW 1120 Query: 469 D 471 D Sbjct: 1121 D 1121 Score = 45.8 bits (107), Expect = 8e-05 Identities = 27/99 (27%), Positives = 39/99 (39%) Frame = +1 Query: 178 TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 357 +GS D T++ W + GH V+S+ S D I+++D SG Sbjct: 942 SGSDDHTIKIWDAAS-GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT 1000 Query: 358 SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDT 474 TL+ VW V F P G +K+WDT Sbjct: 1001 CTQTLEGHGGSVWSVAFSPDG-QRVASGSDDKTIKIWDT 1038 Score = 38.9 bits (89), Expect = 0.009 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 1/113 (0%) Frame = +1 Query: 136 WVPAADHRPTAL-LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 WV + P + +GS D T++ W + GH V S+ Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQRVASG 1111 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 SID I+++D SG TL+ V V F P G +K+WD Sbjct: 1112 SIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDG-QRVASGSIDGTIKIWD 1163 Score = 36.6 bits (83), Expect = 0.046 Identities = 20/74 (27%), Positives = 28/74 (37%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH V+S+ S D I+++D SG TL+ VW V F P Sbjct: 839 GHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDR-ER 897 Query: 430 XXXXXXXXXVKLWD 471 +K+WD Sbjct: 898 VASGSDDKTIKIWD 911
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 44.7 bits (104), Expect = 2e-04 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 2/112 (1%) Frame = +1 Query: 163 TALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 ++L+ + DETVR W L V PA H+ + S+ S D IRV+ Sbjct: 309 SSLIASAGFDETVRVWDFKTGLCVKCIPA--HSDPITSISYNHDGNTMATSSYDGCIRVW 366 Query: 340 DVDSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPI 492 D SG+ + TL D + V V F P G +KLWD +K +P+ Sbjct: 367 DAASGSCLKTLVDTDHAPVTFVCFSPNG-KYLLSAQLDSSLKLWDPKKAKPL 417 Score = 43.5 bits (101), Expect = 4e-04 Identities = 26/109 (23%), Positives = 46/109 (42%) Frame = +1 Query: 178 TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 357 TGS D+ ++ W D+ A H LG+ S D+ +++FDV SGA Sbjct: 230 TGSADKQIKVWNTVDMTYLQTLAS-HQLGINDFSWSSNSQFIASASDDTTVKIFDVISGA 288 Query: 358 SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 + T+ + V+ F+P+ V++WD + + +P Sbjct: 289 CLRTMRGHTNYVFCCSFNPQS-SLIASAGFDETVRVWDFKTGLCVKCIP 336
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4| Length = 376 Score = 44.3 bits (103), Expect = 2e-04 Identities = 32/132 (24%), Positives = 54/132 (40%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H SI +A + P + L T S D+TV+ W D + + GH LGV + Sbjct: 86 HTKSISSAKFSPCGKY-----LGTSSADKTVKIWNMDHM-ICERTLTGHKLGVNDIAWSS 139 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D +++F++ + TL + V+ F+P+ V++W Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS-SLVVSGSFDESVRIW 198 Query: 469 DTEKWQPIASLP 504 D + I +LP Sbjct: 199 DVKTGMCIKTLP 210
>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog| Length = 694 Score = 44.3 bits (103), Expect = 2e-04 Identities = 35/130 (26%), Positives = 53/130 (40%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+ SI + + P ++ L +GS+D ++ W G H V L Sbjct: 104 HKASISSLDFHPMGEY-----LASGSVDSNIKLWDVRRKGCVFRYKG-HTQAVRCLAFSP 157 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S DS ++++D+ +G +T + S V VQFHP VKLW Sbjct: 158 DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE-YLLASGSADRTVKLW 216 Query: 469 DTEKWQPIAS 498 D EK+ I S Sbjct: 217 DLEKFNMIGS 226 Score = 34.7 bits (78), Expect = 0.18 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 4/108 (3%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIRV 336 LL TG D V W AV+ P GH V + S+ +R+ Sbjct: 35 LLATGGEDCRVNIW-----AVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRL 89 Query: 337 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 +D+++ + TL + + + FHP G +KLWD + Sbjct: 90 WDLEAAKILRTLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDVRR 136 Score = 30.8 bits (68), Expect = 2.5 Identities = 24/100 (24%), Positives = 38/100 (38%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 ++ GS+ ++R W + + G H + SL S+DS+I+++DV Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMG-HKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 V V + F P G VKLWD Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDG-KWLASASDDSTVKLWD 175
>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4| Length = 395 Score = 44.3 bits (103), Expect = 2e-04 Identities = 34/136 (25%), Positives = 54/136 (39%) Frame = +1 Query: 97 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 276 + AH+ SI + P + + +GS D +++ W+ D V GH LG+ Sbjct: 102 IPNAHKKSISGIKFSPDGRY-----MGSGSADCSIKIWRMD--FVYEKTLMGHRLGINEF 154 Query: 277 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXX 456 S D ++VFDV SG V TL + V+ F+P G Sbjct: 155 SWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSG-TLIASGSFDET 213 Query: 457 VKLWDTEKWQPIASLP 504 +++W I S+P Sbjct: 214 IRIWCARNGNTIFSIP 229
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 42.0 bits (97), Expect = 0.001 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 3/115 (2%) Frame = +1 Query: 136 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPA--GGHALGVVSLXXXXXXXXXX 306 WV A P ALL +GS D TVR W D+A A A GH V+ + Sbjct: 503 WVRAVAFSPDGALLASGSDDATVRLW---DVAAAEERAVFEGHTHYVLDIAFSPDGSMVA 559 Query: 307 XVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 S D R+++V +G L V+ V F P G ++LWD Sbjct: 560 SGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDG-SMVASGSRDGTIRLWD 613 Score = 37.4 bits (85), Expect = 0.027 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 5/141 (3%) Frame = +1 Query: 61 REGTMKLAGFKSVDGAHEDSIWAAAW-VPAADHRPTALLLTGSIDETVRAWQPDDLAVAS 237 R+GT++L + G D + A A V + P +L D TV W VAS Sbjct: 605 RDGTIRL--WDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWD-----VAS 657 Query: 238 PPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQ 405 A GH V ++ S D IR++DV + TTL+ V V Sbjct: 658 GEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVA 717 Query: 406 FHPKGIXXXXXXXXXXXVKLW 468 FHP+G +++W Sbjct: 718 FHPEG-TTLASASEDGTIRIW 737
>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 777 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/98 (25%), Positives = 39/98 (39%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H +WA ++ P + L +GS D T+R W D GH ++ L Sbjct: 506 HRRGVWACSFNPFSRQ-----LASGSGDRTIRIWNVDTQQCVQT-LEGHTGAILKLIYIS 559 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 402 + D ++V+ + SG V TLD VW + Sbjct: 560 QGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL 597 Score = 30.4 bits (67), Expect = 3.3 Identities = 24/111 (21%), Positives = 44/111 (39%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 ++ + S D+T++ W V GH GV + S D IR+++VD Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGV-LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 + V TL+ + + + +G VK+W + +A+L Sbjct: 538 TQQCVQTLEGHTGAILKLIYISQG-TQVVSAAADGLVKVWSLSSGECVATL 587
>WDS_DROME (Q9V3J8) Protein will die slowly| Length = 361 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/138 (25%), Positives = 57/138 (41%) Frame = +1 Query: 88 FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 267 F+ H+ I AW ++D R LL++GS D+T++ W+ + GH+ V Sbjct: 106 FEKTISGHKLGISDVAW--SSDSR---LLVSGSDDKTLKVWEL-STGKSLKTLKGHSNYV 159 Query: 268 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 447 S D +R++DV +G + TL A V V F+ G Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSY 218 Query: 448 XXXVKLWDTEKWQPIASL 501 ++WDT Q + +L Sbjct: 219 DGLCRIWDTASGQCLKTL 236 Score = 37.0 bits (84), Expect = 0.035 Identities = 24/111 (21%), Positives = 46/111 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 L + S D+ ++ W D GH LG+ + S D ++V+++ + Sbjct: 87 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST 145 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 G S+ TL + V+ F+P+ V++WD + + +LP Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLP 195 Score = 33.9 bits (76), Expect = 0.30 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%) Frame = +1 Query: 169 LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 L+++GS DE+VR W + + PA H+ V ++ S D R++D Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 227 Query: 346 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 SG + TL D V V+F P G +KLWD K Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 272
>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800| Length = 1258 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/126 (25%), Positives = 50/126 (39%) Frame = +1 Query: 124 WAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXX 303 WA +P A +L +GS D+TV+ W S GH + + Sbjct: 938 WA---LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISS-LEGHTDFIYGIAFSPDSQTL 993 Query: 304 XXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKW 483 S DS +R++++ +G L V+ V FHP+G VKLW+ Sbjct: 994 ASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQG-KIIATGSADCTVKLWNISTG 1052 Query: 484 QPIASL 501 Q + +L Sbjct: 1053 QCLKTL 1058 Score = 36.2 bits (82), Expect = 0.060 Identities = 30/120 (25%), Positives = 46/120 (38%) Frame = +1 Query: 118 SIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXX 297 +I +AA+ P LL T D VR W+ + GH+ V + Sbjct: 644 NILSAAFSPEGQ-----LLATCDTDCHVRVWEVKSGKLLLI-CRGHSNWVRFVVFSPDGE 697 Query: 298 XXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 477 D +++++ V G + TL EV+ V FHP G +KLWD + Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDG-ETLASASGDKTIKLWDIQ 756
>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| (WD-repeat protein BIG-3) Length = 334 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/111 (22%), Positives = 46/111 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 L + S D+ ++ W D GH LG+ + S D ++++DV S Sbjct: 60 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 G + TL + V+ F+P+ V++WD + + + +LP Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP 168 Score = 34.3 bits (77), Expect = 0.23 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%) Frame = +1 Query: 169 LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 L+++GS DE+VR W + + PA H+ V ++ S D R++D Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200 Query: 346 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 SG + TL D V V+F P G +KLWD K Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 245
>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| Length = 334 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/111 (22%), Positives = 46/111 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 L + S D+ ++ W D GH LG+ + S D ++++DV S Sbjct: 60 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 G + TL + V+ F+P+ V++WD + + + +LP Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP 168 Score = 34.3 bits (77), Expect = 0.23 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%) Frame = +1 Query: 169 LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 L+++GS DE+VR W + + PA H+ V ++ S D R++D Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200 Query: 346 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 SG + TL D V V+F P G +KLWD K Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 245
>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124| Length = 1683 Score = 39.7 bits (91), Expect = 0.005 Identities = 26/110 (23%), Positives = 42/110 (38%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 + +GS+D+T++ W D + GH V S+ D I+++ Sbjct: 1087 IASGSLDKTIKLWSRDGRLFRT--LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSD 1144 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 G + T+ V V F P G +KLWDT Q + +L Sbjct: 1145 GTLLKTITGHEQTVNNVYFSPDG-KNLASASSDHSIKLWDTTSGQLLMTL 1193 Score = 38.5 bits (88), Expect = 0.012 Identities = 30/151 (19%), Positives = 64/151 (42%), Gaps = 4/151 (2%) Frame = +1 Query: 61 REGTMKLAGFKSVD----GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLA 228 R+ T+KL ++ H ++A ++P ++ ++ + S+D T+R WQ ++ Sbjct: 1301 RDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSN-----IIASASLDNTIRLWQRPLIS 1355 Query: 229 VASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQF 408 AG GV ++ D +I+++ G+ + TL + ++G+ F Sbjct: 1356 PLEVLAGNS--GVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISF 1412 Query: 409 HPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 P+G VK+W + + +L Sbjct: 1413 TPQG-DLIASANADKTVKIWRVRDGKALKTL 1442 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/127 (22%), Positives = 50/127 (39%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 285 AH D +++ + P ++L + S D+TV+ W+ D + GH+ V S Sbjct: 1528 AHNDLVYSVNFNPDG-----SMLASTSADKTVKLWRSHDGHLLH-TFSGHSNVVYSSSFS 1581 Query: 286 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKL 465 S D ++++ +D G +TTL + V F P G K+ Sbjct: 1582 PDGRYIASASEDKTVKIWQID-GHLLTTLPQHQAGVMSAIFSPDG-KTLISGSLDTTTKI 1639 Query: 466 WDTEKWQ 486 W + Q Sbjct: 1640 WRFDSQQ 1646 Score = 30.4 bits (67), Expect = 3.3 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 41/168 (24%) Frame = +1 Query: 88 FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD--------------- 222 F++++G HED++++ ++ P + +G D+T++ WQ D Sbjct: 1106 FRTLNG-HEDAVYSVSFSPDGQ-----TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVN 1159 Query: 223 ----------LAVASPPAG----------------GHALGVVSLXXXXXXXXXXXVSIDS 324 LA AS GH+ GV+++ S D Sbjct: 1160 NVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDK 1219 Query: 325 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 ++++ G + TL+ V + F P G +KLW Sbjct: 1220 TVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDG-KTLASASADKTIKLW 1266
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 39.7 bits (91), Expect = 0.005 Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Frame = +1 Query: 166 ALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIR 333 ++L TGS D+TVR W ++S GH V S+ S D +R Sbjct: 1003 SMLATGSGDQTVRLWD-----ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057 Query: 334 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 ++D+ SG + TL S V V F P G V+LWD Sbjct: 1058 LWDISSGNCLYTLQGHTSCVRSVVFSPDG-AMLASGGDDQIVRLWD 1102 Score = 38.9 bits (89), Expect = 0.009 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 1/123 (0%) Frame = +1 Query: 136 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 WV + P A+L +GS D+TVR W GH V S+ Sbjct: 1370 WVGSVIFSPDGAILASGSGDQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASG 1428 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPI 492 S D +R++++ SG + TL + V V F G+ +KLWD + + I Sbjct: 1429 SDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGL-ILASGSDDETIKLWDVKTGECI 1487 Query: 493 ASL 501 +L Sbjct: 1488 KTL 1490 Score = 38.5 bits (88), Expect = 0.012 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 1/113 (0%) Frame = +1 Query: 136 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 WV A P A L +GS D+TVR W + GH V S+ Sbjct: 1160 WVNAVAFSPDGATLASGSGDQTVRLWDISS-SKCLYILQGHTSWVNSVVFNPDGSTLASG 1218 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 S D +R+++++S + T S V V F+P G V+LWD Sbjct: 1219 SSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDG-SMLASGSSDKTVRLWD 1270 Score = 37.7 bits (86), Expect = 0.021 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Frame = +1 Query: 166 ALLLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 A+L +GS D+TVR W D++ + GH V S+ D +R++ Sbjct: 1045 AMLASGSDDQTVRLW---DISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 D+ SG + TL S V + F P G+ V+LWD Sbjct: 1102 DISSGNCLYTLQGYTSWVRFLVFSPNGV-TLANGSSDQIVRLWD 1144 Score = 36.6 bits (83), Expect = 0.046 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 1/114 (0%) Frame = +1 Query: 133 AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 309 +WV + P + L +GS D+TVR W+ + + GH V S+ Sbjct: 1201 SWVNSVVFNPDGSTLASGSSDQTVRLWEINS-SKCLCTFQGHTSWVNSVVFNPDGSMLAS 1259 Query: 310 VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 S D +R++D+ S + T + V V F+P G V+LW+ Sbjct: 1260 GSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDG-SMLASGSGDQTVRLWE 1312 Score = 34.7 bits (78), Expect = 0.18 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 1/112 (0%) Frame = +1 Query: 136 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 WV + P ++L +GS D+TVR W+ + GH V S+ Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASG 1344 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D +R++ + SG + T + V V F P G V+LW Sbjct: 1345 SDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDG-AILASGSGDQTVRLW 1395 Score = 34.7 bits (78), Expect = 0.18 Identities = 27/106 (25%), Positives = 39/106 (36%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 +L +GS D+TVR W GH V S+ S D +R++D+ Sbjct: 920 MLASGSDDQTVRLWDISS-GQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDIS 978 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQ 486 SG + V+ V F+ G V+LWD Q Sbjct: 979 SGECLYIFQGHTGWVYSVAFNLDG-SMLATGSGDQTVRLWDISSSQ 1023 Score = 34.3 bits (77), Expect = 0.23 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 1/113 (0%) Frame = +1 Query: 133 AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 309 +WV + P ++L +GS D+TVR W + GH V S+ Sbjct: 1243 SWVNSVVFNPDGSMLASGSSDKTVRLWDISS-SKCLHTFQGHTNWVNSVAFNPDGSMLAS 1301 Query: 310 VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D +R++++ S + T S V V F P G V+LW Sbjct: 1302 GSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDG-TMLASGSDDQTVRLW 1353 Score = 29.3 bits (64), Expect = 7.4 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%) Frame = +1 Query: 160 PTALLL-TGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDS 324 P +L+L +GS D+TVR W ++S GH V S+ S D Sbjct: 958 PNSLMLASGSSDQTVRLWD-----ISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQ 1012 Query: 325 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 +R++D+ S S V V F G V+LWD Sbjct: 1013 TVRLWDISSSQCFYIFQGHTSCVRSVVFSSDG-AMLASGSDDQTVRLWD 1060
>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 85 kDa subunit) (p85) (TAFII-80) Length = 704 Score = 39.3 bits (90), Expect = 0.007 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPDDLAVASPPA-GGHALGVVSLXXXXXXXXXXXVSIDSHI 330 H + + TGS D TVR W D++ S GH V SL S+D +I Sbjct: 543 HPNSNYVATGSSDRTVRLW--DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNI 600 Query: 331 RVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 ++D+ +G+ VTTL S V + F G + LWD K Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTTITFSRDG-TVLAAAGLDNNLTLWDFHK 649 Score = 33.5 bits (75), Expect = 0.39 Identities = 37/159 (23%), Positives = 59/159 (37%) Frame = +1 Query: 16 LSSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDE 195 L + + R+ + R G + +S+ G H ++ A+ P + LLL+ S D Sbjct: 423 LDKESADINVRMLDDRSGEVT----RSLMG-HTGPVYRCAFAPEMN-----LLLSCSEDS 472 Query: 196 TVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLD 375 T+R W + G H V + S D R++ DS ++ Sbjct: 473 TIRLWSLLTWSCVVTYRG-HVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV 531 Query: 376 AAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPI 492 S+V VQFHP V+LWD Q + Sbjct: 532 GHLSDVDCVQFHPNS-NYVATGSSDRTVRLWDNMTGQSV 569
>PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/85 (22%), Positives = 38/85 (44%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH++GV + +D+ RV+D+ +G + L+ E++G+ F P G Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 420 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 K+WD + + + ++P Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIP 445
>PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/85 (22%), Positives = 38/85 (44%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH++GV + +D+ RV+D+ +G + L+ E++G+ F P G Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 420 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 K+WD + + + ++P Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIP 445
>PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) (hPrp4) Length = 522 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/85 (22%), Positives = 38/85 (44%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH++GV + +D+ RV+D+ +G + L+ E++G+ F P G Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 421 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 K+WD + + + ++P Sbjct: 422 IATGSGDNTCKVWDLRQRRCVYTIP 446
>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of| lin-12) (Sel-10 protein) Length = 587 Score = 38.9 bits (89), Expect = 0.009 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 6/118 (5%) Frame = +1 Query: 166 ALLLTGSIDETVRAWQPDDLAVASPPAGGHAL----GVVSLXXXXXXXXXXXVSI--DSH 327 +++ +GS+D ++R W + P G + G SL VS DSH Sbjct: 431 SIVCSGSLDTSIRVWD------FTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSH 484 Query: 328 IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 +RV+D+ G V L S + +Q+ G VKLWD E+ I L Sbjct: 485 VRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRDL 540 Score = 33.5 bits (75), Expect = 0.39 Identities = 29/110 (26%), Positives = 47/110 (42%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 +++GS D TV+ W D ++ GH V + S D+ +RV+DV+S Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHT-LQGHTSTVRCMAMAGSILVTG--SRDTTLRVWDVES 367 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 G + TL + V VQF + VK+W+ + I +L Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTTV---VSGGYDFTVKIWNAHTGRCIRTL 414
>TUP11_SCHPO (Q09715) Transcriptional repressor tup11| Length = 614 Score = 38.5 bits (88), Expect = 0.012 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 13/117 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-------------PDDLAVASPPAG 249 H++S+++ A+ P +++LL+GS+D+T++ W+ P+ + A+ Sbjct: 483 HKESVYSIAFSP-----DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT--YT 535 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 GH V+S+ S D ++ +D+ +G S T + V V F P G Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)| (COMPASS component swd3) (Complex proteins associated with set1 protein swd3) Length = 380 Score = 38.5 bits (88), Expect = 0.012 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = +1 Query: 136 WVPAADHRPTA-LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 309 +V + D P LL++GS DETVR W D + PA H+ ++S+ Sbjct: 140 YVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPA--HSEPIISVSISADGTLCAT 197 Query: 310 VSIDSHIRVFDVDSGASVTTL 372 S D R++DV SG + TL Sbjct: 198 ASYDGMARIWDVLSGQCLKTL 218 Score = 32.7 bits (73), Expect = 0.67 Identities = 24/111 (21%), Positives = 41/111 (36%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 + T S D T++ W + GH G+ + S D IR++D + Sbjct: 69 IATSSSDGTIKIWSALTFRLECT-LFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEK 127 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 SV L + V + F+P G V++W+ + + LP Sbjct: 128 RCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRMLP 177
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 38.1 bits (87), Expect = 0.016 Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Frame = +1 Query: 49 LRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ---PD 219 L ER EG DG H+DS+++ A+ P + L++GS+D+T++ W+ P Sbjct: 460 LAERLEGP---------DG-HKDSVYSVAFSPDGRN-----LVSGSLDKTIKMWELSAPR 504 Query: 220 DLAVASPPAG--------GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASV---- 363 + ++PP G GH V+S+ S D ++ +D +G + Sbjct: 505 GIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQ 564 Query: 364 ----TTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 + + APS V G P G+ ++W Sbjct: 565 GHKNSVISVAPSPVTG----PNGVGYFATGSGDMRARIW 599
>WDR39_HUMAN (O76071) WD-repeat protein 39 (Ciao 1 protein)| Length = 339 Score = 37.4 bits (85), Expect = 0.027 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPD--DLAVASPPAGGHALGVVSLXX 282 HE+ + + AW P+ + LL T S D++V W+ D D H V + Sbjct: 104 HENEVKSVAWAPSGN-----LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 Query: 283 XXXXXXXXXVSIDSHIRVF--DVDSGASVTTLDAAPSEVWGVQFHPKG 420 S D ++++ + D TL+ S VW + F P G Sbjct: 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG 206
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 36.2 bits (82), Expect = 0.060 Identities = 27/104 (25%), Positives = 38/104 (36%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 LL TG D V W A GH + SL S IRV+D++ Sbjct: 35 LLATGGDDCQVNVWSVK--AQLRHELTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 + + TL + + + FHP G +KLWD + Sbjct: 93 AAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 135 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/101 (22%), Positives = 39/101 (38%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 L++ GS ++R W + + G H + SL S+D+ I+++DV Sbjct: 76 LIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYGSFVASGSLDTDIKLWDVR 134 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 + + V ++F P G VKLWD Sbjct: 135 RKGCIFKYKSHTQAVRCLRFSPDG-KWLASAADDHTVKLWD 174
>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10) Length = 629 Score = 36.2 bits (82), Expect = 0.060 Identities = 29/113 (25%), Positives = 47/113 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 +++G+ D V+ W P+ GH V SL S+D+ IRV+DV++ Sbjct: 436 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 492 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLPVP 510 G + TL S G++ VK+WD + Q + +L P Sbjct: 493 GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP 542
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 36.2 bits (82), Expect = 0.060 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1113 PGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172 Query: 120 R 118 + Sbjct: 1173 K 1173 Score = 32.3 bits (72), Expect = 0.87 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGPR 1218 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1288 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781
>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBX30) (hCdc4) (Archipelago homolog) (hAgo) (SEL-10) Length = 707 Score = 36.2 bits (82), Expect = 0.060 Identities = 29/113 (25%), Positives = 47/113 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 +++G+ D V+ W P+ GH V SL S+D+ IRV+DV++ Sbjct: 514 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 570 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLPVP 510 G + TL S G++ VK+WD + Q + +L P Sbjct: 571 GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP 620
>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20| Length = 606 Score = 36.2 bits (82), Expect = 0.060 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPD--DLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSH 327 H +L+T S D+T + W DL + GH V + DS Sbjct: 335 HPTKPILVTASDDKTWKMWHMPGGDLIMCGE---GHKDWVAGVDFHPAGTCLASGGGDSA 391 Query: 328 IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 ++++D + VTT +W V+FH G V+LWD Sbjct: 392 VKIWDFEKQRCVTTFTDHKQAIWSVRFHHLG-EVVASGSLDHTVRLWD 438 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/77 (27%), Positives = 29/77 (37%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH L V +L S D +++ + G + + V GV FHP G Sbjct: 324 GHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAG-TC 382 Query: 430 XXXXXXXXXVKLWDTEK 480 VK+WD EK Sbjct: 383 LASGGGDSAVKIWDFEK 399
>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 817 Score = 35.8 bits (81), Expect = 0.079 Identities = 22/78 (28%), Positives = 32/78 (41%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 LL T S D+TV+ W D +V GH V D I+++D Sbjct: 547 LLATSSGDKTVKIWSLDTFSVMKT-LEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCS 605 Query: 349 SGASVTTLDAAPSEVWGV 402 SG + TLD + +W + Sbjct: 606 SGECLKTLDGHNNRLWAL 623
>DOA1_YEAST (P36037) Protein DOA1| Length = 715 Score = 35.8 bits (81), Expect = 0.079 Identities = 32/124 (25%), Positives = 52/124 (41%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 285 AH S+W A V ++++ LT S D+T++ WQ D V +G H VV Sbjct: 135 AHNASVWDAKVVSFSENK----FLTASADKTIKLWQND--KVIKTFSGIHN-DVVRHLAV 187 Query: 286 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKL 465 S D I++ D+ +G + T + S V+ ++ P G V++ Sbjct: 188 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRI 245 Query: 466 WDTE 477 W E Sbjct: 246 WSKE 249
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.8 bits (81), Expect = 0.079 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1115 PGPAGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174 Query: 120 R 118 + Sbjct: 1175 K 1175 Score = 33.1 bits (74), Expect = 0.51 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783
>PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 389 Score = 35.8 bits (81), Expect = 0.079 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 5/132 (3%) Frame = +1 Query: 91 KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVV 270 +++ GAH+ I A A D +TGS D T++ W ++ ++ + GH LG+ Sbjct: 78 RTLAGAHQGWIRAIA----LDEITNKWYVTGSADSTIKIWDFENNSLKA-VLTGHVLGIR 132 Query: 271 SLXXXXXXXXXXXVSIDSHIRVFDV-----DSGASVTTLDAAPSEVWGVQFHPKGIXXXX 435 SL D +R +D+ D+G + + V+ + HP+ + Sbjct: 133 SLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPE-LDVLF 191 Query: 436 XXXXXXXVKLWD 471 V++WD Sbjct: 192 SGGKDCVVRVWD 203
>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2| Length = 356 Score = 35.4 bits (80), Expect = 0.10 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Frame = +1 Query: 157 RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSI--DSHI 330 R L+LTGS D T W + + GH V ++ +S D H Sbjct: 166 RSDNLILTGSGDSTCAIWDVESGQLIQN-FHGHTGDVFAIDVPKCDTGNTFISAGADKHS 224 Query: 331 RVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 V+D+ SG V + + +++ V+FHP G Sbjct: 225 LVWDIRSGQCVQSFEGHEADINTVRFHPNG 254
>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17| Length = 1322 Score = 35.4 bits (80), Expect = 0.10 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 1/125 (0%) Frame = +1 Query: 97 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 276 V H ++ W P + +L +GS D TVR W A + GH V L Sbjct: 561 VFSGHTAKVFHVKWSPLRE----GILCSGSDDGTVRIWDYTQDACINI-LNGHTAPVRGL 615 Query: 277 XXXXXX-XXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXX 453 S D I+V+D G V T+ ++V+G+ HP Sbjct: 616 MWNTEIPYLLISGSWDYTIKVWDTREGTCVDTVYDHGADVYGLTCHPSRPFTMASCSRDS 675 Query: 454 XVKLW 468 V+LW Sbjct: 676 TVRLW 680
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 35.4 bits (80), Expect = 0.10 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1113 PGPAGEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172 Query: 120 R 118 + Sbjct: 1173 K 1173 Score = 33.1 bits (74), Expect = 0.51 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1218 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/58 (37%), Positives = 23/58 (39%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG GD + PP G G G PGADG G GAV G PG D Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGD 1292 Score = 28.9 bits (63), Expect = 9.6 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 124 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 996 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1054 Query: 123 ------DRVLVSPVHRL 91 DR L PV L Sbjct: 1055 LRGFPGDRGLPGPVGAL 1071 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781
>LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dlis1) (DLis-1)| Length = 411 Score = 35.4 bits (80), Expect = 0.10 Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAA---------------DHRPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE ++ AW P A H L +GS D+T+R W + + Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLT 334 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V L S D IRV+D+ + + TL A + FH K Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFH-KAH 393 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 394 PYVISGSVDQTVKVWE 409
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 35.4 bits (80), Expect = 0.10 Identities = 24/59 (40%), Positives = 28/59 (47%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 DPG + G ER P G R G PG+DGL G + RG V SSG G + D Sbjct: 505 DPGTLGPPGPVGERGAP--GNR-----GFPGSDGLPGPKGAQGERGPVGSSGPKGSQGD 556 Score = 33.1 bits (74), Expect = 0.51 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG + G ER P G G I GLPG G+ G + +G+ SG PG Sbjct: 698 PGAVGPLGPRGERGNPGERGEPG-ITGLPGEKGMAGGHGPDGPKGSPGPSGTPG 750 Score = 32.3 bits (72), Expect = 0.87 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG +G PP GG+ G+ G+PG G V G RG G PG Sbjct: 668 PGPTGFQGHPGPPGPPGEGGKPGD-QGVPGGPGAVGPLGPRGERGNPGERGEPG 720 Score = 32.3 bits (72), Expect = 0.87 Identities = 22/55 (40%), Positives = 24/55 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 DPG M G PP + G DGE G G G V AG RG + G PG Sbjct: 244 DPGPMGPIGSRGPEGPPGKPGEDGE-PGRNGNPGEVGFAGSPGARGFPGAPGLPG 297 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 DPG G+ VP RG G+DG++ G PG GL GE+ G GHPG Sbjct: 622 DPGKPGEAGNPG--VPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPG 678
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.0 bits (79), Expect = 0.13 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1115 PGPAGEKGVPGEEGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174 Query: 120 R 118 + Sbjct: 1175 K 1175 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 +PG S+GD E+ PP G G G PG G G ++G G G R Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGP-TGQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290 Score = 28.9 bits (63), Expect = 9.6 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 124 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 998 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1056 Query: 123 ------DRVLVSPVHRL 91 DR L PV L Sbjct: 1057 LRGFPGDRGLPGPVGAL 1073 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 35.0 bits (79), Expect = 0.13 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G GE+ +G + G G + D Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1140 Query: 120 R 118 + Sbjct: 1141 K 1141 Score = 33.1 bits (74), Expect = 0.51 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + GLPGADG G+E + G + G PG Sbjct: 693 NPGSQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 749 Score = 32.3 bits (72), Expect = 0.87 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 DPG G E PP G+ G PGA G R GE+ +G + G PG Sbjct: 1338 DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGRQGEKGAKGEAGAEGPPG 1388 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PG S+GD E PP G G VG PG G G ++G G G R Sbjct: 1131 EPGQKGSKGDKGENGPPGPPGLQGP-VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1189 Query: 117 VLVSPV 100 L P+ Sbjct: 1190 GLPGPI 1195 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 139 PG EG + P G+DG GLPGA G G E +G G Sbjct: 997 PGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGS 1056 Query: 138 PGGRPDRVLVSPV 100 PG R P+ Sbjct: 1057 PGERGSAGAAGPI 1069
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 35.0 bits (79), Expect = 0.13 Identities = 28/111 (25%), Positives = 46/111 (41%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 LL +D TV+ + D L GH L V+ + S D +++++ +D Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLS-LYGHKLPVICMDISHDGALIATGSADRNVKIWGLD 621 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 G +L A V +QF PK +K WD +K++ I +L Sbjct: 622 FGDCHKSLFAHDDSVMYLQFVPKS-HLFFTAGKDHKIKQWDADKFEHIQTL 671 Score = 32.7 bits (73), Expect = 0.67 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +1 Query: 166 ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 AL+ TGS D V+ W D H V+ L D I+ +D Sbjct: 604 ALIATGSADRNVKIWGLD-FGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDA 662 Query: 346 DSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 D + TL+ E+W + P G ++LW+ Sbjct: 663 DKFEHIQTLEGHHQEIWCLAVSPSG-DYVVSSSHDKSLRLWE 703
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 35.0 bits (79), Expect = 0.13 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G GE+ +G + G G + D Sbjct: 850 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 909 Query: 120 R 118 + Sbjct: 910 K 910 Score = 33.5 bits (75), Expect = 0.39 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + GLPGADG G+E + G S G PG Sbjct: 462 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGSLGPPG 518 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 139 PG EG + P G+DG GLPGA G G E +G G Sbjct: 766 PGAAGKEGAKGDPGPQGVSGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 825 Query: 138 PGGRPDRVLVSPV 100 PG R P+ Sbjct: 826 PGERGSAGTAGPI 838
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 35.0 bits (79), Expect = 0.13 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = -2 Query: 294 PGGMRSE-GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P G+ E G +R PP G G+ + G PG DG+ G RG SGH G Sbjct: 84 PIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNG 143 Query: 132 GRPD 121 R D Sbjct: 144 SRGD 147 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG GD P G GE+ VG PG GL+ G+ R GHPG P Sbjct: 304 PGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNR------GHPG--PP 355 Query: 120 RVLVSP 103 VLV+P Sbjct: 356 GVLVTP 361 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +GD P G DG I G PG G + G G+ G PGGR Sbjct: 100 PGAAGDKGDKGPTGVPGFPGLDG-IPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGR 154
>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 1000 Score = 35.0 bits (79), Expect = 0.13 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Frame = +1 Query: 178 TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVS-IDSH-IRVFDVDS 351 T S+D+TV+ WQ V + GH GV + +S D H ++++D + Sbjct: 160 TASLDKTVKVWQFGS-NVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQN 218 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQ 486 V TLD V V FHP+ + V+LW ++ Sbjct: 219 KTCVQTLDGHAQNVSSVCFHPE-LPLIITGSEDSTVRLWHANTYR 262
>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein| Length = 678 Score = 35.0 bits (79), Expect = 0.13 Identities = 20/80 (25%), Positives = 37/80 (46%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 333 H ++L +GS+D+TV+ W +D + S GH V ++ S D +R Sbjct: 436 HFDASILASGSVDKTVKIWNFEDKSTFS--LRGHTDWVNAVRVDTSSRTVFSASDDCTVR 493 Query: 334 VFDVDSGASVTTLDAAPSEV 393 ++D+D+ + T +V Sbjct: 494 LWDLDTKTCIRTFHGHVGQV 513
>PFS2_YEAST (P42841) Protein PFS2| Length = 465 Score = 34.7 bits (78), Expect = 0.18 Identities = 26/138 (18%), Positives = 55/138 (39%) Frame = +1 Query: 88 FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 267 F+++ AH+ ++ + +D +++G D ++ WQP+ V A H + Sbjct: 127 FETLMQAHDSAVTTMKYSHDSDW-----MISGDADGMIKIWQPNFSMVKEIDA-AHTESI 180 Query: 268 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 447 + S D+ +++++ +G L +V +HP+ + Sbjct: 181 RDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPE-MGLIASASK 239 Query: 448 XXXVKLWDTEKWQPIASL 501 VKLWD I+S+ Sbjct: 240 DNLVKLWDPRSGNCISSI 257
>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 34.7 bits (78), Expect = 0.18 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +1 Query: 94 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 273 S +G H D+I A A+ PAA+ +L TGS D+T+ W +L H V S Sbjct: 280 STEGQHRDAINAIAFNPAAE----TVLATGSADKTIGLWDLRNLKTKLHSLESHTDSVTS 335 Query: 274 L 276 + Sbjct: 336 I 336
>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA homolog) Length = 397 Score = 34.7 bits (78), Expect = 0.18 Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 14/144 (9%) Frame = +1 Query: 91 KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVA------------ 234 +S H+ S+ W P T + + S D+T++ W + L A Sbjct: 92 RSHPDVHKYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSH 147 Query: 235 --SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQF 408 SP A H L V +++ D+ SG+ L E+ V + Sbjct: 148 HMSPAATKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGHRQEILAVSW 194 Query: 409 HPKGIXXXXXXXXXXXVKLWDTEK 480 P+ VKLWD + Sbjct: 195 SPRHDYILATASADSRVKLWDVRR 218
>PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 427 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/109 (22%), Positives = 40/109 (36%) Frame = +1 Query: 178 TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 357 TGS D+T++ W H + V L VS D ++ +D++ Sbjct: 133 TGSNDKTIKIWNLAS-GKLKVTLKAHDMTVRDLAISNRHPYMFSVSEDKTVKCWDLEKNT 191 Query: 358 SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 ++ S V V HP + VK+WD P+ +LP Sbjct: 192 AIRNYHGHLSGVHTVDIHPT-VDVVVTAGRDSVVKVWDIRTRLPVMTLP 239
>PRP46_CRYNE (Q5KDR4) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 473 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/105 (23%), Positives = 38/105 (36%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 333 H +L+TG D +VR W A G H V + S+DS +R Sbjct: 275 HPTLDVLVTGGRDASVRVWDMRTRANIFTLTG-HTSTVGDVKTQDSDPQIISGSMDSTVR 333 Query: 334 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 ++D+ +G + TL V + HP +K W Sbjct: 334 LWDLAAGKCMNTLTHHKKSVRALAIHPTEYSFASASSGGNNIKKW 378
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 34.7 bits (78), Expect = 0.18 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 G +G ER PP G+DG +G G G +GEE +G V + GH G + D+ Sbjct: 1034 GPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDK 1093 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/66 (36%), Positives = 28/66 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 115 PG + G E PP + G G GLPG GL+ GE+ G G PG D Sbjct: 625 PGAKGNVGPPGEPGPPGQQGNHGS-QGLPGPQGLIGTPGEKGPPGNPGIPGLPGS--DGP 681 Query: 114 LVSPVH 97 L P H Sbjct: 682 LGHPGH 687 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 124 PG GD P G DGE G G G +AGE RG + G PG GRP Sbjct: 559 PGEKGQRGDFGHVGQPGPPGEDGER-GAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRP 616 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG G E+ PP G I GLPG+DG + G E G + G PG Sbjct: 652 PGPQGLIGTPGEKGPPGNPG----IPGLPGSDGPLGHPGHEGPTGEKGAQGPPG 701 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 139 PG ++G R PP G+ G+ ++G PG GL GE+ G V S G Sbjct: 1111 PGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMG- 1169 Query: 138 PGGRP 124 P G P Sbjct: 1170 PHGAP 1174 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 252 PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PP G G+ GLPG G G+ G + S GHPG Sbjct: 1413 PPGEAGEKGD-QGLPGVQGPPGPKGDPGPPGPIGSLGHPG 1451 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/55 (36%), Positives = 22/55 (40%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 D G M G R P G +G GLPG G GE+ RG G PG Sbjct: 1164 DVGSMGPHGAPGPRGPQGPTGSEGT-PGLPGGVGQPGAVGEKGERGDAGDPGPPG 1217 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 121 PG GD PP G G G PG G G E R G + G PG G P Sbjct: 1282 PGEKGDPGDVGGPGPPGASGEPGA-PGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPG 1340 Query: 120 R 118 R Sbjct: 1341 R 1341
>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 925 Score = 34.7 bits (78), Expect = 0.18 Identities = 36/133 (27%), Positives = 43/133 (32%) Frame = +1 Query: 103 GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXX 282 G H D + + P D LL TGS D TV+ W+ A P A G LG L Sbjct: 74 GCHSDLVTDLDFSPFDDF----LLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDL-- 127 Query: 283 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVK 462 P EV +QFHP VK Sbjct: 128 ---------------------------------PVEV--LQFHPTS-DGILVSAAGTTVK 151 Query: 463 LWDTEKWQPIASL 501 +WD K QP+ L Sbjct: 152 VWDAAKQQPLTEL 164
>CI112_MOUSE (Q9CYU6) WD repeat-containing protein C9orf112 homolog| Length = 477 Score = 34.7 bits (78), Expect = 0.18 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 1/118 (0%) Frame = +1 Query: 64 EGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP 243 EGT +L S H + AW+ A ++ T L+ +G D +R W L Sbjct: 179 EGTAELQLVASWPAHHFE-----AWIAAFNYWQTELVYSGGDDCLLRGWDTRMLGTPVFT 233 Query: 244 AGGHALGVVSLXXXXXXXXXXXV-SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 + H +GV S+ S D H+ ++D + VW +++HP Sbjct: 234 SKRHCMGVCSIQSSPHQEHILATGSYDEHVLLWDTRNIRQPLADVPVQGGVWRLKWHP 291
>PRP46_ASPFU (Q4WT34) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 46) Length = 453 Score = 34.3 bits (77), Expect = 0.23 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +1 Query: 88 FKSVDG-AHEDSIWAAAWVPAADHRPTAL-LLTGSIDETVRAWQPDDLA 228 F+S+D A S+ A A + +A T L L+TG D+T++ W+PDD A Sbjct: 387 FQSIDTMAQPGSLDAEAGIMSATFDRTGLRLITGEADKTIKVWKPDDEA 435 Score = 29.6 bits (65), Expect = 5.6 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 2/105 (1%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP--PAGGHALGVVSLXX 282 H ++ A P D LL+TG D R W D+ S GH V L Sbjct: 227 HLSGVYTLALHPRLD-----LLVTGGRDGVARVW---DMRTRSNIHVLSGHKGTVADLKC 278 Query: 283 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPK 417 S+D+ +R++D+ +G ++ L V + HP+ Sbjct: 279 QEADPQIITGSLDATVRLWDLAAGKTMGVLTHHKKGVRNLAIHPR 323
>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 5) (Complexed with cdc5 protein 1) Length = 473 Score = 34.3 bits (77), Expect = 0.23 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 3/105 (2%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP---DDLAVASPPAGGHALGVVSLX 279 H ++A P D +L+T D R W ++ V S GH V SL Sbjct: 246 HLSGVYALKLHPTLD-----VLVTAGRDAVARVWDMRTRQNVHVLS----GHKSTVASLA 296 Query: 280 XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 S+DS IR++D+ +G ++TTL V + HP Sbjct: 297 VQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP 341
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 34.3 bits (77), Expect = 0.23 Identities = 22/54 (40%), Positives = 25/54 (46%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P + GD+SE P C G GLPG GL + GEE G S G PG Sbjct: 999 PRAEEARGDNSEGDPGCVGSP-----GLPGPPGLPGQRGEEGPPGMRGSPGPPG 1047 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 252 PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 PP + G G G PG+ GL + G E R+G G PG + ++ Sbjct: 1476 PPGKDGAPGR-PGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEK 1519
>SFTPA_RABIT (P12842) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 247 Score = 34.3 bits (77), Expect = 0.23 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP--- 124 PG +G + PP G G + GLPG DGL+ G RG G PG R Sbjct: 41 PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLIGAPGVPGERG---DKGEPGERGPPG 97 Query: 123 -----DRVLVSPVHRLEPRKLHRTLSSL 55 D L + +H L H L S+ Sbjct: 98 LPAYLDEELQATLHELR----HHALQSI 121
>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 34.3 bits (77), Expect = 0.23 Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W + + + P GG + Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDV 222 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ D G +TL ++ ++++ KG Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFI 281 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 282 LSAGVDKTTI-IWDAHTGEAKQQFP 305 Score = 33.1 bits (74), Expect = 0.51 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 477 S DS +R++DVD G + TL V+ V F P G V +W+T+ Sbjct: 419 SFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGSFDKCVHIWNTQ 472
>POP2_SCHPO (O14170) WD-repeat protein pop2 (Proteolysis factor sud1)| Length = 703 Score = 33.9 bits (76), Expect = 0.30 Identities = 24/112 (21%), Positives = 46/112 (41%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 +L++GS D ++R W+ GH+L + S+ S+D IRV+D+ Sbjct: 519 ILVSGSYDSSIRIWRVST-GECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLS 577 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 +G L+ + V + + +++WD +P+ LP Sbjct: 578 TGTCKYVLEGHDAFVTLLNVFQNRL---ISGSADSTIRIWDLNTGKPLMVLP 626
>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 33.9 bits (76), Expect = 0.30 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = +1 Query: 94 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 273 S +G H D+I A A+ PAA+ +L TGS D+++ W +L H V S Sbjct: 280 SAEGQHRDAINAIAFNPAAE----TVLATGSADKSIGLWDLRNLKTKLHTLECHTDSVTS 335 Query: 274 LX-XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA 381 L S D I +D+ T D A Sbjct: 336 LSWHPFEESVLASASYDRKIMFWDLSRSGEEQTPDDA 372
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 33.9 bits (76), Expect = 0.30 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG + G+ ER PP G G + G PGA G G R+G G PG D Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQG---EKGEPGRPGD 1541 Query: 120 RVLVSP 103 +V P Sbjct: 1542 PAVVGP 1547 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCR---GGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSG 142 D G +GD PP GRDGE+ G PG GL +AGE RGA G Sbjct: 1608 DSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRG 1667 Query: 141 HPGGRPDR 118 G + D+ Sbjct: 1668 PVGEKGDQ 1675 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -2 Query: 297 DPGGMRSEG-DHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 DPG G ER PP G GE G PG GL RA G V +G PG R + Sbjct: 2010 DPGPQGPPGLALGERGPPGPSGLAGE-PGKPGIPGLPGRA------GGVGEAGRPGERGE 2062 Query: 120 R 118 R Sbjct: 2063 R 2063 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P G++ G+ E PP RG G G + G PG GLV G G V +G PG Sbjct: 2202 PSGLK--GEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPG 2257
>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12| Length = 586 Score = 33.9 bits (76), Expect = 0.30 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 11/115 (9%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPA-----------GGH 255 HE+S+++ A+ P + L++GS+D T++ W+ ++ +P GH Sbjct: 457 HEESVYSVAFSPDGKY-----LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH 511 Query: 256 ALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 ++S+ S D I+ + DS S TL + V V P G Sbjct: 512 KDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNG 566
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)| (Protein archipelago) Length = 1326 Score = 33.9 bits (76), Expect = 0.30 Identities = 30/114 (26%), Positives = 46/114 (40%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 L+++G+ D V+ W P+ GH V SL S+D+ IRV+DV+ Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFDGLHVVSG--SLDTSIRVWDVE 1183 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLPVP 510 +G TL S G++ VK+WD Q + +L P Sbjct: 1184 TGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGP 1234 Score = 33.1 bits (74), Expect = 0.51 Identities = 27/103 (26%), Positives = 43/103 (41%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 +++GS D T++ W + GH GV S S D ++V+D+DS Sbjct: 1008 IVSGSDDNTLKVWSAVN-GKCLRTLVGHTGGVWSSQMSGNIIISG--STDRTLKVWDMDS 1064 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 GA V TL S V + H + +++WD E+ Sbjct: 1065 GACVHTLQGHTSTVRCMHLHGSKV---VSGSRDATLRVWDIEQ 1104
>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein| Length = 554 Score = 33.9 bits (76), Expect = 0.30 Identities = 30/132 (22%), Positives = 49/132 (37%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H D + A+ P+ + L T S D+T R W + A G H+ V + Sbjct: 338 HLDRLARVAFHPSGKY-----LGTTSYDKTWRLWDINTGAELLLQEG-HSRSVYGIAFQQ 391 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 +DS RV+D+ +G S+ V+ V F P G ++W Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG-YHLASGGEDNQCRIW 450 Query: 469 DTEKWQPIASLP 504 D + + +P Sbjct: 451 DLRMRKSLYIIP 462
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 33.5 bits (75), Expect = 0.39 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PGG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 199 EPGGSGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257
>ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8| Length = 397 Score = 33.5 bits (75), Expect = 0.39 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 14/144 (9%) Frame = +1 Query: 91 KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVA------------ 234 +S H+ S+ W P T + + S D+T++ W + L +A Sbjct: 92 RSHPDVHKYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEETVYSH 147 Query: 235 --SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQF 408 SP A H L V + +++ D+ SG+ L E+ V + Sbjct: 148 HMSPVATKHCLVAVG-------------TRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 Query: 409 HPKGIXXXXXXXXXXXVKLWDTEK 480 P+ KLWD + Sbjct: 195 SPRYEYILATASADSRAKLWDVRR 218
>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A| (Transducin beta-like 1X-related protein 1-A) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-A) (TBL1-related protein 1-A) (xTBLR1) Length = 519 Score = 33.5 bits (75), Expect = 0.39 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 285 H + + A W P + LL + S D T++ W D V A + + Sbjct: 353 HTNEVNAIKWDPTGN-----LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPT 407 Query: 286 X-------XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 444 S DS +R++DVD G + TL V+ V F P G Sbjct: 408 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGS 466 Query: 445 XXXXVKLWDTE 477 V +W+T+ Sbjct: 467 FDKCVHIWNTQ 477 Score = 31.6 bits (70), Expect = 1.5 Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 14/161 (8%) Frame = +1 Query: 64 EGTMKLAGFKSVD-GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP 240 +G +++ K+V HE ++ AW P +D LL +GS D T R W + + + Sbjct: 157 DGDVEIPSSKAVVLRGHESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGS 211 Query: 241 P---------AGGHAL----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA 381 GG + V SL S D R++ D G +TL Sbjct: 212 TQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQH 270 Query: 382 PSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASLP 504 ++ ++++ KG + +WD + P Sbjct: 271 KGPIFALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQQFP 310
>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B| (Transducin beta-like 1X-related homolog 1-B) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B) (TBL1-related protein 1-B) Length = 522 Score = 33.5 bits (75), Expect = 0.39 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 285 H + + A W P + LL + S D T++ W D V A + + Sbjct: 356 HTNEVNAIKWDPTGN-----LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPT 410 Query: 286 X-------XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 444 S DS +R++DVD G + TL V+ V F P G Sbjct: 411 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGS 469 Query: 445 XXXXVKLWDTE 477 V +W+T+ Sbjct: 470 FDKCVHIWNTQ 480 Score = 31.2 bits (69), Expect = 1.9 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W + + + GG + Sbjct: 176 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 230 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ D G +TL ++ ++++ KG Sbjct: 231 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFI 289 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 290 LSAGVDKTTI-IWDAHTGEAKQQFP 313
>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I| Length = 509 Score = 33.5 bits (75), Expect = 0.39 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 3/120 (2%) Frame = +1 Query: 64 EGTMKLAGFKSVDGAHEDSIWAAAW-VPAADHRPT-ALLLTGSIDETVRAWQP-DDLAVA 234 +G++K+ F E + W V D P+ LL +GS D V+ W P +A Sbjct: 185 DGSLKVWNFHM--STEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIA 242 Query: 235 SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 + + + S VS DS RVFD+ + V L +V V +HP Sbjct: 243 TLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHP 302 Score = 28.9 bits (63), Expect = 9.6 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW---QPDD 222 AH+ IW+ + P LL TGS D+T R W +PDD Sbjct: 358 AHDLGIWSMQYHPLGH-----LLCTGSNDKTTRFWSRSRPDD 394
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 33.5 bits (75), Expect = 0.39 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPI 492 S DS +R++DV+ G+ + TL V+ V F P G V +W T+ Q + Sbjct: 604 SFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDG-KHLASGSFDKCVHIWSTQTGQLV 662 Query: 493 AS 498 S Sbjct: 663 HS 664 Score = 31.2 bits (69), Expect = 1.9 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 222 HE ++ AW P+ D LL +GS D T R W D Sbjct: 354 HESEVFICAWNPSRD-----LLASGSGDSTARIWDMSD 386
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 33.1 bits (74), Expect = 0.51 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 7/128 (5%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLX--- 279 H + + +W P + ++ TGS+D T+R W P GH+ + SL Sbjct: 185 HYNWVLCVSWSPDGE-----VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEP 239 Query: 280 ----XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 447 S D I+++D S T+ + V V++ +G+ Sbjct: 240 IHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL--LYSGSH 297 Query: 448 XXXVKLWD 471 V++WD Sbjct: 298 DRTVRVWD 305
>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491| Length = 348 Score = 33.1 bits (74), Expect = 0.51 Identities = 26/104 (25%), Positives = 40/104 (38%) Frame = +1 Query: 160 PTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 P L G++ V+AW D A G +L + ++ + + I +F Sbjct: 241 PDGRKLVGAVRNFVKAWNLAD-AKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIF 299 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 D+ +G VTTL V + F P G VK+WD Sbjct: 300 DLANGKQVTTLRGHQGWVLSLAFSPDG-NTLYSGAEDKTVKIWD 342
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 33.1 bits (74), Expect = 0.51 Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W ++ + GGH + Sbjct: 181 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ D G +TL ++ ++++ KG Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFALKWNKKGNYI 294 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 295 LSAGVDKTTI-IWDAHTGEAKQQFP 318 Score = 32.7 bits (73), Expect = 0.67 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 285 H + + A W P+ LL + S D T++ W D V A + + Sbjct: 361 HTNEVNAIKWDPSG-----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415 Query: 286 XXXXXX-------XXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 444 S DS +R++DV+ G + TL V+ V F P G Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG-KYLASGS 474 Query: 445 XXXXVKLWDTE 477 V +W+T+ Sbjct: 475 FDKCVHIWNTQ 485
>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 33.1 bits (74), Expect = 0.51 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 477 S DS +R++DVD G + TL V+ V F P G V +W+T+ Sbjct: 419 SFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGSFDKCVHIWNTQ 472 Score = 31.2 bits (69), Expect = 1.9 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W + + + GG + Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ D G +TL ++ ++++ KG Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFI 281 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 282 LSAGVDKTTI-IWDAHTGEAKQQFP 305
>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 472 Score = 33.1 bits (74), Expect = 0.51 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 2/110 (1%) Frame = +1 Query: 178 TGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 TGS D+T++ W DLA GH +GV +L D ++ +D+++ Sbjct: 180 TGSADKTIKIW---DLATGKLRLTLTGHIMGVRALGVSPRHPYMFSGGEDKMVKCWDLET 236 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQPIASL 501 V S V+ + HP + ++WD P+ L Sbjct: 237 NKVVRHYHGHLSAVYSLDIHPT-LDVLVSAGRDAVARVWDIRTRDPVVVL 285 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = +1 Query: 139 VPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPPA--GGHALGVVSLXXXXXXXXXXX 309 V + D PT +L++ D R W D+ P GH + + Sbjct: 250 VYSLDIHPTLDVLVSAGRDAVARVW---DIRTRDPVVVLSGHKSTINRVKFQASEPQVIT 306 Query: 310 VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPK 417 S D +R++++ +G ++TTL V G+ HP+ Sbjct: 307 ASADETVRLWNLQAGKTMTTLTHHKKSVRGLTLHPE 342
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 32.7 bits (73), Expect = 0.67 Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W ++ + GGH + Sbjct: 180 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 234 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ D G +TL ++ ++++ KG Sbjct: 235 PSNKDVTSLDWNTNGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFALKWNRKGNYI 293 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 294 LSAGVDKTTI-IWDAHTGEAKQQFP 317
>POP1_SCHPO (P87060) WD-repeat protein pop1| Length = 775 Score = 32.7 bits (73), Expect = 0.67 Identities = 24/101 (23%), Positives = 43/101 (42%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 L+++ S D T+R W+ V GH V S+ D+ IR+++++ Sbjct: 589 LIVSASYDGTLRVWKAST-GVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 SG + TL + V V F+ + I +++WD Sbjct: 648 SGELLQTLHGHSNLVSQVTFN-QNILVSASAPPDTSLRVWD 687
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 32.7 bits (73), Expect = 0.67 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PGG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 199 EPGGSGPMGPPGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257
>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 32.7 bits (73), Expect = 0.67 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDS 324 H + L TGS D+TVR W Q + + + + GH V+SL D Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFT----GHRGPVLSLSFSPNGKYLASAGEDQ 490 Query: 325 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 ++++D+ SG L + + F P V++WD Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSPDS-GLIASASMDNSVRVWD 538 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 L + D+ ++ W DLA + GH + SL S+D+ +RV+D+ Sbjct: 483 LASAGEDQRLKLW---DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539 Query: 346 DSGASVTTLDAAPSEVWGV 402 S T D + E+ GV Sbjct: 540 RSTCCNTPADGSSGELVGV 558
>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 32.7 bits (73), Expect = 0.67 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDS 324 H + L TGS D+TVR W Q + + + + GH V+SL D Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFT----GHRGPVLSLAFSPNGKYLASAGEDQ 490 Query: 325 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 ++++D+ SG L + + F P V++WD Sbjct: 491 RLKLWDLASGTLYKELRGHTDNITSLTFSPDS-GLIASASMDNSVRVWD 538
>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 655 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%) Frame = +1 Query: 169 LLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 LL TG D V W +P+ + + GH V S+ S IRV+ Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLT----GHTSPVESVRLNTPEELIVAGSQSGSIRVW 90 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 D+++ + TL + + + FHP G +KLWD + Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/84 (20%), Positives = 34/84 (40%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH+ V L + D ++++D+ +G ++ V V+FHP Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203 Query: 430 XXXXXXXXXVKLWDTEKWQPIASL 501 ++ WD EK+Q ++ + Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 32.7 bits (73), Expect = 0.67 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G E+ P GRDG VGLPG G GE+ +G + G G + Sbjct: 1083 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK 1140 Score = 32.3 bits (72), Expect = 0.87 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG G PP G G+ + GLPGADG G+E + G + G PG Sbjct: 695 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 751 Score = 32.0 bits (71), Expect = 1.1 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 DPG G E PP G+ G PGA G R GE+ +G + G PG Sbjct: 1340 DPGQPGPPGPSGEAGPPGPPGKRGP----PGAAGAEGRQGEKGAKGEAGAEGPPG 1390 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 139 PG EG + P G+DG GLPGA G G E +G G Sbjct: 999 PGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1058 Query: 138 PGGRPDRVLVSPV 100 PG R P+ Sbjct: 1059 PGERGSAGTAGPI 1071
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 32.7 bits (73), Expect = 0.67 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 13/145 (8%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 261 HE ++ AW P +D LL +GS D T R W ++ + GGH + Sbjct: 178 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 232 Query: 262 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 V SL S D R++ ++G +TL ++ ++++ KG Sbjct: 233 PSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKKGNYV 291 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLP 504 + +WD + P Sbjct: 292 LSAGVDKTTI-IWDAHTGEAKQQFP 315 Score = 32.0 bits (71), Expect = 1.1 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVV----- 270 H + + A W P+ LL + S D T++ W D V A + + Sbjct: 358 HTNEVNAIKWDPSG-----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412 Query: 271 --SLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 444 + S DS +R++DV+ G TL V+ V F P G Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDG-KYLASGS 471 Query: 445 XXXXVKLWDTE 477 V +W+T+ Sbjct: 472 FDKYVHIWNTQ 482
>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 658 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%) Frame = +1 Query: 169 LLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 LL TG D V W +P+ + + GH V S+ S IRV+ Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLT----GHTSPVESVRLNTPEELIVAGSQSGSIRVW 90 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 D+++ + TL + + + FHP G +KLWD + Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/84 (20%), Positives = 34/84 (40%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH+ V L + D ++++D+ +G ++ V V+FHP Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-YL 203 Query: 430 XXXXXXXXXVKLWDTEKWQPIASL 501 ++ WD EK+Q ++ + Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCI 227
>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)| Length = 356 Score = 32.3 bits (72), Expect = 0.87 Identities = 21/54 (38%), Positives = 24/54 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P G EG + PP G G + GLPG +GL GE G SG PG Sbjct: 236 PEGDLKEGPPGDEGPPGPIGAPG-MPGLPGRNGLTGGQGERGWPGVSGESGEPG 288
>SFTPA_RAT (P08427) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 32.3 bits (72), Expect = 0.87 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G + PP G G + GLPG DGL G RG G PG R Sbjct: 42 PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGERG---DKGEPGER 94
>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 425 Score = 32.3 bits (72), Expect = 0.87 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 2/104 (1%) Frame = +1 Query: 166 ALLLTGSIDETVRAWQPDDLAVA--SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 A TGS D T+R W DLA GH + V + S D ++ + Sbjct: 127 AWFATGSNDSTIRVW---DLATGKLKVTLQGHIMTVRDICISARHPYMFSASQDKLVKCW 183 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 D++ V S V V HP + V++WD Sbjct: 184 DLERNTVVRDFHGTLSGVHSVDLHP-SLDLIVSAGRDSVVRVWD 226
>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog| Length = 492 Score = 32.3 bits (72), Expect = 0.87 Identities = 34/138 (24%), Positives = 52/138 (37%) Frame = +1 Query: 7 SPRLSSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGS 186 S L+++ K G L E T +LA K + A D + L LTG Sbjct: 170 SKSLTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDIKGN-LSLTGG 228 Query: 187 IDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVT 366 ID+TV + + V GH + ++ S DSHIRV+ +S Sbjct: 229 IDKTVVLYDYEKEQVMQT-FKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKA 287 Query: 367 TLDAAPSEVWGVQFHPKG 420 +D + V + + G Sbjct: 288 IIDVHQAPVTDISLNASG 305
>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGSVDQTVKVWE 407
>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGSVDQTVKVWE 407
>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGSVDQTVKVWE 407
>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGSVDQTVKVWE 407
>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.3 bits (72), Expect = 0.87 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGSVDQTVKVWE 407
>NPP17_CAEEL (Q93454) Nucleoporin-17 (Nuclear pore complex protein 17) (CeRAE1)| Length = 373 Score = 32.3 bits (72), Expect = 0.87 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 97 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 222 VDGA ED+I + P +P +L GS D T+R W +D Sbjct: 37 VDGAPEDTIQVIKFSPTPQDKP--MLACGSWDGTIRVWMFND 76 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +1 Query: 94 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDL 225 +V G H+ + W+ +++ L+TGS D+T+R W +L Sbjct: 124 AVVGTHDGPVKTCHWINGNNYQ---CLMTGSFDKTLRFWDMKNL 164
>C1QT5_RAT (Q5FVH0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 32.3 bits (72), Expect = 0.87 Identities = 26/70 (37%), Positives = 30/70 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 115 PG + G H + P R GRDG G PGA G GE R G G PG R + Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPRGE-- 85 Query: 114 LVSPVHRLEP 85 PV + P Sbjct: 86 -AGPVGAIGP 94
>LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 32.0 bits (71), Expect = 1.1 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Frame = +1 Query: 109 HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 243 HE + +W P + + +P LL+GS D+T++ W + Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332 Query: 244 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 423 GH V + + D +RV+D + + TL+A V + FH K Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391 Query: 424 XXXXXXXXXXXVKLWD 471 VK+W+ Sbjct: 392 PYVVTGFVDQTVKVWE 407
>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting| complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DBD-interacting protein 1) (PDIP1) Length = 2649 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/104 (24%), Positives = 39/104 (37%) Frame = -3 Query: 404 WTPQTSEGAASSVVTEAPESTSKTRMWLSMETXXXXXXXXXXARETTPSACPPAGGDATA 225 W P+ ++ A+ APE + E A PA D TA Sbjct: 961 WPPRGTQAGAAGNWEAAPEPVG------DLAEEQAAVVTAMVKAEPGDEALSPASRDITA 1014 Query: 224 RSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTD 93 ++ +A + + V+ V AAG AAA +ES+ A + Sbjct: 1015 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAE 1058
>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2| Length = 924 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 D GG G +P GG G G PG G QR GA + G PGG P R Sbjct: 244 DAGGGNYRGGGVGALP---GGGSGGFRGRPGGGGHGGGGRPGQRGGAAGAFGRPGGAPRR 300
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G AGE+ +G V G G + + Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100 Query: 120 R 118 + Sbjct: 1101 K 1101 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PGG+ + G E+ P G G + G PG G GE+ G +G PG Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-VQGEPGVKGPRGERGEKGESGQAGEAGPPG 1252 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/53 (37%), Positives = 23/53 (43%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 G S G E PP + G G GLPG G + GE+ RG G PG Sbjct: 634 GPKGSLGPQGEPGPPGQQGTPGA-QGLPGPQGAIGPHGEKGARGKPGLPGMPG 685
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G E+ P GRDG VGLPG G AGE+ +G V G G + + Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100 Query: 120 R 118 + Sbjct: 1101 K 1101 Score = 30.0 bits (66), Expect = 4.3 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PGG+ + G E+ P G G I G PG G GE+ G G PG + Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-IQGEPGVKGPRGERGEKGESGQPGEPGPPGAK 1254
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 130 PG +GD ER P G G++ G PGADG+ G+ RG G G Sbjct: 81 PGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140 Query: 129 RPD 121 R D Sbjct: 141 RGD 143
>SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 249 Score = 32.0 bits (71), Expect = 1.1 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGH--PGGRP- 124 PG +G + PP G G + G PG DG++ G RG G P G P Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMAGPPGQDGMIGAPGLPGERGEKGEPGERGPPGLPA 101 Query: 123 --DRVLVSPVHRLEPRKLHRTLSSL 55 D L S +H + H+ L S+ Sbjct: 102 HLDEELQSALHEIR----HQILQSM 122
>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A| Length = 407 Score = 32.0 bits (71), Expect = 1.1 Identities = 30/121 (24%), Positives = 47/121 (38%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+D++ + P+ LL +GS D+TVR W P ++ S H V S+ Sbjct: 60 HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D ++V+ + +L + V +F P G VKLW Sbjct: 114 DGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172 Query: 469 D 471 D Sbjct: 173 D 173
>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA) Length = 396 Score = 32.0 bits (71), Expect = 1.1 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 3/127 (2%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H S+ W P T + + S D+T++ W + L A V S Sbjct: 98 HRYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQTAD--VFNFEETVYSHHMSP 151 Query: 289 XXXXXXXVSIDSH---IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXV 459 V++ + +++ D+ SG+ L E+ V + P+ V Sbjct: 152 VSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRV 211 Query: 460 KLWDTEK 480 KLWD + Sbjct: 212 KLWDVRR 218
>C1QT5_MOUSE (Q8K479) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/56 (41%), Positives = 25/56 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG + G H + P R GRDG G PGA G GE R G G PG R Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPR 83
>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G + PP G G + GLPG DG+ G RG G PG R Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 94
>PEX7_HUMAN (O00628) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 323 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/108 (22%), Positives = 44/108 (40%) Frame = +1 Query: 70 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG 249 T K AG V H +++ W + R L+++GS D+TV+ W P G Sbjct: 97 TAKAAGPLQVYKEHAQEVYSVDW---SQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRG 153 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEV 393 ++ ++ S D +R++DV + + A +E+ Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEI 201 Score = 28.9 bits (63), Expect = 9.6 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +1 Query: 73 MKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 210 +K AG + V AH+ I + W ++ LL+TG++D ++R W Sbjct: 185 VKAAGVRIVIPAHQAEILSCDWCKYNEN----LLVTGAVDCSLRGW 226
>WDR47_HUMAN (O94967) WD-repeat protein 47| Length = 919 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Frame = +1 Query: 169 LLLTGSIDETVRAWQ---PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 ++ +GS D+TVR W P + V G V S+ DS ++ Sbjct: 768 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 827 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHP 414 D+ G V + S+V V+F P Sbjct: 828 DIRGGRMVQSYHPHSSDVRSVRFSP 852
>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)| Length = 367 Score = 31.6 bits (70), Expect = 1.5 Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 10/142 (7%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 HE I A +P A+ + S D+TV W + GHA+ V L Sbjct: 102 HEREITKIACIPKANQ-----FFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSP 156 Query: 289 XXXXXXXVSIDSHIRVFDVDSGAS----------VTTLDAAPSEVWGVQFHPKGIXXXXX 438 S D+ + ++DV +G VT L PSE + VQ Sbjct: 157 DSSQLCTGSRDNSLLLWDVGTGQCVERASVSRNLVTHLCWVPSEPYIVQ----------- 205 Query: 439 XXXXXXVKLWDTEKWQPIASLP 504 ++LWD+ Q P Sbjct: 206 TSEDKTIRLWDSRGLQMAHMFP 227
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 31.6 bits (70), Expect = 1.5 Identities = 30/121 (24%), Positives = 47/121 (38%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+D++ + P+ LL +GS D+TVR W P ++ S H V S+ Sbjct: 60 HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D ++V+ + +L + V +F P G VKLW Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172 Query: 469 D 471 D Sbjct: 173 D 173
>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)| Length = 821 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 11/93 (11%) Frame = +1 Query: 19 SSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPA-----ADHRPTALLLTG 183 S ++K F +++ T ++V HE+ + A W P+ H+P LL + Sbjct: 251 SIRLKENTFTIKDGGVSTTVAVILETVLAGHENWVNAIHWQPSFYKDGVLHQPVRLL-SA 309 Query: 184 SIDETVRAWQPDDLA------VASPPAGGHALG 264 S+D+T+ W PD+ + V GG+ LG Sbjct: 310 SMDKTMILWAPDEESGVWLEQVRVGEVGGNTLG 342
>SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 92 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G + PP G G + GLPG DG+ G RG G PG R Sbjct: 18 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 70
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG-----G 130 PGG + G ER G GEI GLPG GL G E G G PG G Sbjct: 749 PGGPGTPGFPGERG---NSGEHGEI-GLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804 Query: 129 RPDRVLVSP 103 P R + P Sbjct: 805 PPGRCIEGP 813 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Frame = -2 Query: 273 GDHSERVPPCRGGRDGEIV-------GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 GD + PP G G + GLPG +GL G++ RRG G PG Sbjct: 792 GDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGL---KGQQGRRGKTGPKGDPG 842
>WDR47_MOUSE (Q8CGF6) WD-repeat protein 47| Length = 920 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Frame = +1 Query: 169 LLLTGSIDETVRAWQ---PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 339 ++ +GS D+TVR W P + V G V S+ DS ++ Sbjct: 769 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 828 Query: 340 DVDSGASVTTLDAAPSEVWGVQFHP 414 D+ G V + S+V V+F P Sbjct: 829 DIRGGRMVQSYHPHSSDVRSVRFSP 853
>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 2000 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 153 VSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP 40 + G PGGRP R + V +L L R +++LS T P Sbjct: 657 LGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNP 694
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 13/77 (16%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 139 PG +G+ PP G DG+ + G PGADGL G G G Sbjct: 284 PGIDGIDGERGPNGPPGPPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGE 343 Query: 138 PG-----GRPDRVLVSP 103 PG G P + L+ P Sbjct: 344 PGPPGARGLPGKGLLGP 360
>C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-related protein 7| precursor Length = 289 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 139 PG S G H P R GRDG GL G G + AGE+ +G G Sbjct: 46 PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGP 105 Query: 138 PGGRPDRVLVSPV 100 G ++ V P+ Sbjct: 106 IGPEGEKGEVGPI 118
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PGG G PP G+ G+ G PG +GL G++ G ++G PG Sbjct: 333 PGGPGDRGRQGNFGPPGSTGQKGDR-GEPGLNGLPGNPGQKGEPGRAGATGEPG 385 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 G M +GD + CR G G+ + G+PG DG GE RG GH G Sbjct: 558 GDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE---RGYPGERGHDG 612 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -2 Query: 252 PPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPV 100 PP G GE +G PGADG V G+ G SG PG ++ V P+ Sbjct: 858 PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPI 916
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 G + G+ E PP G I G PGADG GE+ G +G PG Sbjct: 747 GARGAPGERGETGPPGTSG----IAGPPGADGQPGAKGEQGEAGQKGDAGAPG 795 Score = 28.9 bits (63), Expect = 9.6 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 +PGG+ G ER P G R G PG DGL G RG +G G D Sbjct: 427 EPGGVGPIGPPGERGAP--GNR-----GFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478
>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 417 Score = 31.6 bits (70), Expect = 1.5 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAG-------GHALGVVSLXXXXXXXXXXXVSIDSHI 330 L +GS D+TV+ W DL + G GH G+ ++ DS I Sbjct: 179 LFSGSEDKTVKCW---DLERTNSLLGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVI 235 Query: 331 RVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 RV+D+ S + L S++ + G ++LWD K Sbjct: 236 RVWDLRSRTEIMVLSGHRSDITSIA-SQIGDPQIITSSMDATIRLWDIRK 284
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 153 VSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP 40 + G PGGRP R + V +L L R +++LS T P Sbjct: 653 LGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNP 690
>C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/56 (41%), Positives = 25/56 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG + G H + P R GRDG G PGA G GE R G G PG R Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGDPGPR 83
>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| Length = 1201 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%) Frame = +1 Query: 145 AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 321 A+ H L+++GS D V+ W+ A GH V S+ V D Sbjct: 215 ASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGED 274 Query: 322 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 +RV+D+D V W + HP Sbjct: 275 KTLRVWDLDKRTPVKQFKRENDRFWLIAAHP 305
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 + G + G + ER PP G G+ PG G R G G G PGG+ DR Sbjct: 978 ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033 Score = 27.7 bits (60), Expect(2) = 1.5 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGL 193 P G R +G + PP GR+G+ GLPG GL Sbjct: 100 PDGNRPQGPKGDPGPPGIPGRNGD-PGLPGQPGL 132 Score = 22.3 bits (46), Expect(2) = 1.5 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -2 Query: 216 GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 G+ G G AG G SSGHPG Sbjct: 164 GVGGMGGYPGPAGPPGPPGPPGSSGHPG 191
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 210 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 268
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 121 PG +G+ PP R G G G PG G G G V SG PG R D Sbjct: 919 PGEAGRDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGD 978 Query: 120 RVLVSPV 100 V PV Sbjct: 979 PGPVGPV 985 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG +G PP + G DG G PG G AG + RG + G PG Sbjct: 121 EPGQTGPQGPRGPPGPPGKAGEDGH-PGKPGRPGERGVAGPQGARGFPGTPGPPG 174 Score = 29.3 bits (64), Expect = 7.4 Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG--- 133 + G S G+ PP G GE GLPGADG G RGA G G Sbjct: 375 EEGKRGSNGEPGSAGPPGPAGLRGEPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPNG 434 Query: 132 --GRP 124 GRP Sbjct: 435 DAGRP 439
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 48 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 106
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 31.2 bits (69), Expect = 1.9 Identities = 34/121 (28%), Positives = 45/121 (37%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 HE ++ A + +AD R +LT S+D T R W D L GH V Sbjct: 1505 HEGPVYFAQF--SADSR---YILTASVDNTARIW--DFLGRPLLTLAGHQSIVYQARFSP 1557 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 VS D R++D SG +V L V V + P G +LW Sbjct: 1558 EGNLIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDG-QMLVTASNDGTARLW 1615 Query: 469 D 471 D Sbjct: 1616 D 1616
>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog| Length = 854 Score = 31.2 bits (69), Expect = 1.9 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 GH V SL S D +R++D+ S + + PS+V + FHP G Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDG 521
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 31.2 bits (69), Expect = 1.9 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = -2 Query: 249 PCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P G DG++ VGLPGA G AG G SSGH G Sbjct: 1108 PGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQG 1151
>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A| Length = 407 Score = 31.2 bits (69), Expect = 1.9 Identities = 30/121 (24%), Positives = 47/121 (38%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+D++ + P+ LL +GS D+TVR W P ++ S H V S+ Sbjct: 60 HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D ++V+ + +L + V +F P G VKLW Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172 Query: 469 D 471 D Sbjct: 173 D 173 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 1/96 (1%) Frame = +1 Query: 136 WVPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 WV A P L+++ S D+TV+ W H V + Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAA 205 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 +D+ ++V+DV + + + V G+ FHP G Sbjct: 206 GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 241
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 31.2 bits (69), Expect = 1.9 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 4/129 (3%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVS 273 AH ++ A P + +++TG D+ V W AV GH V S Sbjct: 14 AHSSNVNCLALGPMSGR----VMVTGGEDKKVNLW-----AVGKQNCIISLSGHTSPVDS 64 Query: 274 LXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXX 453 + S ++++D++ V TL + + + FHP G Sbjct: 65 VKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFG-EFVASGSTDT 123 Query: 454 XVKLWDTEK 480 VKLWD + Sbjct: 124 NVKLWDVRR 132 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 345 L+T S D T++ W DL + H GV + S D ++ +D+ Sbjct: 158 LVTASEDTTIKLW---DLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDL 214 Query: 346 DSGASVTTLDAAPSEVWGVQFHPKG 420 ++ V++ S V + FHP G Sbjct: 215 ETFQLVSSTSPGASAVRSISFHPDG 239
>CDC4_CANAL (P53699) Cell division control protein 4| Length = 684 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 ++++GS D TVR W D + GH V S S+DS+I V++ + Sbjct: 492 IIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFE 551 Query: 349 SG 354 +G Sbjct: 552 TG 553
>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1| Length = 446 Score = 31.2 bits (69), Expect = 1.9 Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 8/103 (7%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD---LAVASPPAGGHALGVVSLX 279 H +A W P R T LLTG + + W P D V P GH V L Sbjct: 213 HMGEGFALDWSP----RVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQ 268 Query: 280 -XXXXXXXXXXVSIDSHIRVFDVDSGAS----VTTLDAAPSEV 393 S D+ IR++D+ + S +TT A +V Sbjct: 269 WSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDV 311
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 206 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 264
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG S G R P GR GE GLPG+ G V AG+E G G PG Sbjct: 426 PGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPG 484
>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)| Length = 783 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 85 GFKSVDGAHEDSIWAAAWVPAADHR-PTALLLTGSIDETVRAWQPDDL 225 G K VDG + W A VP AD + P L L +++ +R+++PD+L Sbjct: 289 GPKQVDGKPVEGTWRAHQVPIADFKNPEHLTL---LEDWMRSYRPDEL 333
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRG--GRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSS 145 PGG+ S G P RG G+DG +G+PGA G+ G +GA+ Sbjct: 1539 PGGVGSPGRDGS--PGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPP 1596 Query: 144 GHPGGRPDR 118 G PG + +R Sbjct: 1597 GVPGAKGER 1605
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 30.8 bits (68), Expect = 2.5 Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRR---GAVVSSGHPG-- 133 +PGG G ER P G R G PG DG+ G R GAV G PG Sbjct: 311 EPGGAGPAGPPGERGAP--GSR-----GFPGQDGIAGPKGPPGERGSPGAVGPKGSPGEA 363 Query: 132 GRP 124 GRP Sbjct: 364 GRP 366
>C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7| precursor Length = 289 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 139 PG S G H P R GRDG GL G G + AGE+ +G G Sbjct: 46 PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLKGKTGPLGLAGEKGDQGETGKKGP 105 Query: 138 PGGRPDRVLVSP 103 G ++ V P Sbjct: 106 IGPEGEKGEVGP 117
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 30.8 bits (68), Expect = 2.5 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 18/78 (23%) Frame = -2 Query: 297 DPGGMRS-----EGDHSERVPPCRGGR--DGEIVGLPG----ADGLVDRAGEEQR----- 166 DP RS +G+ +E++ R G DGEIVGLPG G D+ G R Sbjct: 10 DPEKARSYQVEVKGEDAEKLIGKRIGDVIDGEIVGLPGYKLKITGGTDKDGFPMRPDIHG 69 Query: 165 --RGAVVSSGHPGGRPDR 118 R ++ SG PG RP+R Sbjct: 70 PVRVRLLLSGPPGFRPER 87
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 124 PG G PP G G G PGA G G++ GA ++GHPG G+P Sbjct: 126 PGPPGPPGPTGPEGPPGPNGAPGH-PGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQP 183
>PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog| Length = 501 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Frame = +1 Query: 235 SPPAGGHALGVVSLX-XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFH 411 S A GH V+ L S DS + ++D+ G SV L A +V +QFH Sbjct: 248 SSSAEGHTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFH 307 Query: 412 PKGIXXXXXXXXXXXVKLWD 471 P V L+D Sbjct: 308 PFEAQTLISGSYDKSVALYD 327
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 G S GD R G+DGE GLPG GL GE G+ G PG Sbjct: 571 GSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPA 630 Query: 126 PDR 118 +R Sbjct: 631 GER 633 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG G R GRDG+ GLPG G+ AG G + S+G PG Sbjct: 123 PGPAGPSGPIGPRGQTGERGRDGKS-GLPGLRGVDGLAGPPGPPGPIGSTGSPG 175
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.8 bits (68), Expect = 2.5 Identities = 21/55 (38%), Positives = 26/55 (47%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 130 PG + G+ ER P G G+ G PG G RAG +G + SG PGG Sbjct: 355 PGPAGASGNPGERGEP---GPQGQ-AGPPGPQGPPGRAGSPGGKGEMGPSGIPGG 405 Score = 30.0 bits (66), Expect = 4.3 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 GG G + PP G G GLPG G+ G G G PGG+ Sbjct: 695 GGPGPAGSEGAKGPPGPPGAPGG-TGLPGLQGMPGERGASGSPGPKGDKGEPGGK 748
>TUP1_CANAL (P56093) Transcriptional repressor TUP1| Length = 514 Score = 30.8 bits (68), Expect = 2.5 Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG-GHALGVVSLXXX 285 HE I++ + P D L++GS D +VR W DL + GV ++ Sbjct: 298 HEQDIYSLDFFPDGDR-----LVSGSGDRSVRIW---DLRTSQCSLTLSIEDGVTTVAVS 349 Query: 286 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA-------PSEVWGVQFHPKGIXXXXXXX 444 S+D +RV+D +G V LD+ V+ V F G Sbjct: 350 PDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG-EQIASGS 408 Query: 445 XXXXVKLWDTE 477 VKLW E Sbjct: 409 LDRTVKLWHLE 419
>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2| Length = 561 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/60 (36%), Positives = 29/60 (48%) Frame = -2 Query: 228 GEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQ 49 GEI+ L G +G AG+ GA+V P G RV + HR PR L R + + Q Sbjct: 340 GEIIALMGRNG----AGKSTLLGALVGLVPPAGGSVRVGGAVPHRTAPRDLVRRVGLVPQ 395
>SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G + PP G G + GLPG DGL G G G PG R Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGEHG---DKGEPGER 94
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 130 PG +G PP G+ GE VG PGA G +G RG ++G PG Sbjct: 634 PGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGA 693 Query: 129 R 127 R Sbjct: 694 R 694 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 + G + G + ER PP G G+ PG G R G G G PGG+ DR Sbjct: 978 ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PGG G ER PP G+PGA G G E +G G PG Sbjct: 670 PGGKGDSGAPGERGPP-------GTAGIPGARGGAGPPGPEGGKGPAGPPGPPG 716
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 130 PG +GD ER P G G++ G PGADG+ G+ RG G G Sbjct: 81 PGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140 Query: 129 RPD 121 + D Sbjct: 141 QGD 143
>WDR57_MOUSE (Q6PE01) WD-repeat protein 57| Length = 358 Score = 30.4 bits (67), Expect = 3.3 Identities = 25/111 (22%), Positives = 42/111 (37%) Frame = +1 Query: 157 RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 336 R L+ TGS D TV+ W D A+ + V+++ ID+ I+V Sbjct: 163 RGPQLVCTGSDDGTVKLW--DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220 Query: 337 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQP 489 +D+ T+ V G+ +G V++WD + P Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 270
>SWD3_YEAST (P38123) COMPASS component SWD3 (Complex proteins associated with| SET1 protein SWD3) (Set1C component SWD3) Length = 315 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXX-XXXXXXXXXVSIDSHI 330 +R LL T S+DE+++ W + ++ H+ VVS+ S D I Sbjct: 105 NRKGNLLFTSSMDESIKIWDTLNGSLMK-TISAHSEAVVSVDVPMNDSSILSSGSYDGLI 163 Query: 331 RVFDVDSGASVTTL 372 R+FD ++G + TL Sbjct: 164 RIFDAETGHCLKTL 177
>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)| (NY-REN-62 antigen) Length = 1674 Score = 30.4 bits (67), Expect = 3.3 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASP--PAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 LL TGS D T + W +L GGH VVS+ VS S+I+V+D Sbjct: 1359 LLFTGSKDRTCKVW---NLVTGQEIMSLGGHPNNVVSVKYCNYTSLVFTVS-TSYIKVWD 1414 Query: 343 V-DSGASVTTLDAA 381 + DS + TL ++ Sbjct: 1415 IRDSAKCIRTLTSS 1428
>KI21B_HUMAN (O75037) Kinesin family member 21B| Length = 1637 Score = 30.4 bits (67), Expect = 3.3 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 25/136 (18%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 LL TGS D + + W +L A GH VVS+ VS S+I+V+D Sbjct: 1320 LLFTGSKDRSCKMW---NLVTGQEIAALKGHPNNVVSIKYCSHSGLVFSVST-SYIKVWD 1375 Query: 343 V-DSGASVTTLDAAPSEVWG----------------------VQFHPKGIXXXXXXXXXX 453 + DS + TL ++ + G + P G Sbjct: 1376 IRDSAKCIRTLTSSGQVISGDACAATSTRAITSAQGEHQINQIALSPSG--TMLYAASGN 1433 Query: 454 XVKLWDTEKWQPIASL 501 V++W+ ++QP+ L Sbjct: 1434 AVRIWELSRFQPVGKL 1449
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 115 PG + GD E P G G G PG G V AG G ++G PG + +R Sbjct: 682 PGPAGANGDRGEAGPAGPAGPAGPR-GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 740 Query: 114 LVSP 103 P Sbjct: 741 TKGP 744
>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73| (Transcription initiation factor TFIID 73 kDa subunit) (TAFII-73) Length = 642 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/81 (22%), Positives = 29/81 (35%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH V + S D R++ D+ +++ + +W VQF P G Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG-YY 459 Query: 430 XXXXXXXXXVKLWDTEKWQPI 492 +LWD E P+ Sbjct: 460 FATASHDQTARLWDVEHAAPL 480
>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) Length = 643 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/109 (20%), Positives = 40/109 (36%) Frame = +1 Query: 154 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 333 H +A +LTGS D+T R W + GH V ++ + I Sbjct: 472 HPNSAYVLTGSSDKTCRLWDV-HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530 Query: 334 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 ++D+ +G + T+ ++ + F + V+ WD K Sbjct: 531 LWDIGTGRRIKTMRGHRGNIYSLSFSRES-TVLVSGGSDCTVRAWDVFK 578
>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear| matrix protein 200) (hPso4) Length = 504 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/86 (25%), Positives = 35/86 (40%) Frame = +1 Query: 163 TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 T +LTG D+ V + + + GH V S+ S D+ IR++ Sbjct: 234 TNKILTGGADKNVVVFDKSSEQILAT-LKGHTKKVTSVVFHPSQDLVFSASPDATIRIWS 292 Query: 343 VDSGASVTTLDAAPSEVWGVQFHPKG 420 V + + V + A S V G+ H G Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATG 318
>NODB_RHILP (P24150) Chitooligosaccharide deacetylase (EC 3.5.1.-) (Nodulation| protein B) Length = 229 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = -2 Query: 210 PGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP*VF 31 PGAD +V+ + R GA+V H G PD + H L H+T+ +LS P + Sbjct: 153 PGADAIVNDVLQSVRPGAIVLL-HDGCPPDEMQQGADHSLR----HQTIMALSSIIPALH 207 Query: 30 D 28 D Sbjct: 208 D 208
>RAE1L_ARATH (Q38942) Rae1-like protein At1g80670| Length = 349 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 210 HE I A AW+P + LL TGS D+T++ W Sbjct: 113 HEGPIAAMAWIPGMN-----LLATGSWDKTLKYW 141
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 115 PG + GD E P G G G PG G V AG G ++G PG + +R Sbjct: 684 PGPAGATGDRGEAGPAGPAGPAGPR-GTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 742 Query: 114 LVSP 103 P Sbjct: 743 TKGP 746 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG + G R P GR GE G PGA G V AG+E G G PG Sbjct: 420 PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPG 478
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 30.0 bits (66), Expect = 4.3 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP-PAGGHAL 261 AH+ I+A +W P + H LL+ S D+T + W + +V S P G + L Sbjct: 231 AHDGGIYAISWSPDSTH-----LLSASGDKTSKIWDVNVNSVVSTFPMGSNVL 278
>MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring protein 30) (E3| ubiquitin ligase complex SCF(Met30) subunit MET30) Length = 640 Score = 30.0 bits (66), Expect = 4.3 Identities = 27/100 (27%), Positives = 43/100 (43%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 L+TGS+D+T+R W S GH+ V+S+ S D ++V+ V+S Sbjct: 355 LITGSLDKTIRVWNYITGECIS-TYRGHSDSVLSVDSYQKVIVSG--SADKTVKVWHVES 411 Query: 352 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 + TL V V+ HPK +++WD Sbjct: 412 -RTCYTLRGHTEWVNCVKLHPKSF-SCFSCSDDTTIRMWD 449
>TIP1_YEAST (P27654) Temperature shock-inducible protein 1 precursor (EC| 3.1.1.-) Length = 210 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -3 Query: 230 TARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAA---QIESS*APSTDLNPASFIVPS 63 T R S A ++S+ P S A AA + AA + SS APS+ P+S PS Sbjct: 97 TTRLSSEIAAALASVSPASSEAASSSEAASSSKAASSSEATSSAAPSSSAAPSSSAAPS 155
>PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog| Length = 899 Score = 30.0 bits (66), Expect = 4.3 Identities = 19/87 (21%), Positives = 33/87 (37%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 429 GH + SL V+ D I+V+D +SG + T S + +F KG Sbjct: 337 GHFDSMNSLVYSPDGQRIVTVADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKG-NV 395 Query: 430 XXXXXXXXXVKLWDTEKWQPIASLPVP 510 ++ WD +++ + P Sbjct: 396 LFTSSLDGSIRAWDLIRYRNFRTFTAP 422
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV--GLPGADGLVDRAGEEQRRGAVVSSGHPG--GR 127 PG G+ P + GR G G PG +G AGE+ +G V GHPG GR Sbjct: 191 PGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDGNQGPV---GHPGVPGR 247 Query: 126 P 124 P Sbjct: 248 P 248
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 2/73 (2%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 121 PG +G + P GG G PG G AG + GA + G PG G+ Sbjct: 145 PGNPGPQGPNGNPGAPAHGGGQGP----PGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRS 200 Query: 120 RVLVSPVHRLEPR 82 R L P R P+ Sbjct: 201 RGLPGPSGRPGPQ 213
>WDR57_PONPY (Q5RF51) WD-repeat protein 57| Length = 357 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/111 (22%), Positives = 42/111 (37%) Frame = +1 Query: 157 RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 336 R L+ TGS D TV+ W D A+ + V+++ ID+ I+V Sbjct: 162 RGPQLVCTGSDDGTVKLW--DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219 Query: 337 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQP 489 +D+ T+ V G+ +G V++WD + P Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 269
>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5| snRNP-specific 40 kDa protein) (38 kDa splicing factor) Length = 357 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/111 (22%), Positives = 42/111 (37%) Frame = +1 Query: 157 RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 336 R L+ TGS D TV+ W D A+ + V+++ ID+ I+V Sbjct: 162 RGPQLVCTGSDDGTVKLW--DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219 Query: 337 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQP 489 +D+ T+ V G+ +G V++WD + P Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 269
>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5| (TBP-associated factor 5) (TBP-associated factor 90 kDa) (TAFII-90) Length = 798 Score = 30.0 bits (66), Expect = 4.3 Identities = 28/121 (23%), Positives = 45/121 (37%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H ++++ ++ P + LL+GS D+TVR W D A GH V + Sbjct: 524 HSGTVYSTSFSPDNKY-----LLSGSEDKTVRLWSM-DTHTALVSYKGHNHPVWDVSFSP 577 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D R++ D + ++V V FHP G ++W Sbjct: 578 LGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGC-YVFTGSSDKTCRMW 636 Query: 469 D 471 D Sbjct: 637 D 637
>WD51B_PONPY (Q5RD06) WD-repeat protein 51B| Length = 451 Score = 30.0 bits (66), Expect = 4.3 Identities = 31/126 (24%), Positives = 46/126 (36%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+D + + + P + LL + S D TVR W PD S H V S+ Sbjct: 59 HKDVVTSVQFSPHGN-----LLASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSA 112 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D I+V+ + + +L V +F P G +K+W Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW 171 Query: 469 DTEKWQ 486 DT Q Sbjct: 172 DTTNKQ 177
>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B| Length = 478 Score = 30.0 bits (66), Expect = 4.3 Identities = 31/126 (24%), Positives = 46/126 (36%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 H+D + + + P + LL + S D TVR W PD S H V S+ Sbjct: 59 HKDVVTSVQFSPHGN-----LLASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSA 112 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 468 S D I+V+ + + +L V +F P G +K+W Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW 171 Query: 469 DTEKWQ 486 DT Q Sbjct: 172 DTTNKQ 177
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG S+GD PP + G PGA G + G + G + GHPG + Sbjct: 273 PGAQGSKGDFGRPGPP-------GLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAK 321
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Frame = -2 Query: 294 PGGMRS---EGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGH 139 PGG+ S +G +R P + G G +G+PG G+ G +GA+ G Sbjct: 1538 PGGVGSPGRDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPPGV 1597 Query: 138 PGGRPDR 118 PG + +R Sbjct: 1598 PGAKGER 1604
>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor| Length = 3176 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 118 DPG D ER P G G + G+PG DG+ GE + G G PG + ++ Sbjct: 2156 DPGNPGQ--DSQERGPKGETGDLGPM-GVPGRDGVPGGPGETGKNGGFGRRGPPGAKGNK 2212
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGE-----------IVGLPGADGLVDRAGEEQRRGAVV 151 D G GD + P R GR G I G PGA G G + G Sbjct: 359 DAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPG 418 Query: 150 SSGHPGGRPD 121 G PG R D Sbjct: 419 PKGEPGRRGD 428
>YYAE_BACSU (P37519) Hypothetical protein yyaE| Length = 667 Score = 29.6 bits (65), Expect = 5.6 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 405 VPPQGYCSGCSWWWQWISKTVGHGEVATY 491 V PQG SW W ++K +G GE+ Y Sbjct: 442 VEPQGEAKSDSWIWSELAKRLGFGELFEY 470
>FIE_ARATH (Q9LT47) Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM| (Protein FERTILIZATION-INDEPENDENT SEED 3) Length = 369 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPS---EVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKW 483 S D +R+++V++G + A EV V FHP I +K+W +++ Sbjct: 148 SKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEF 207
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/54 (37%), Positives = 21/54 (38%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PGG G ER PP GG PG G G E +GA G PG Sbjct: 515 PGGKGDSGAPGERGPPGAGGP-------PGPRGGAGPPGPEGGKGAAGPPGPPG 561
>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation| suppressor protein) (Repressor AER2) Length = 713 Score = 29.6 bits (65), Expect = 5.6 Identities = 35/143 (24%), Positives = 51/143 (35%), Gaps = 20/143 (13%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW-------------QPDDLAVASPPAG 249 HE I++ + P+ D L++GS D TVR W + VA P Sbjct: 484 HEQDIYSLDYFPSGDK-----LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 538 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA-------PSEVWGVQF 408 G + SL D +RV+D ++G V LD+ V+ V F Sbjct: 539 GKYIAAGSL--------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 584 Query: 409 HPKGIXXXXXXXXXXXVKLWDTE 477 G VKLW+ + Sbjct: 585 TRDG-QSVVSGSLDRSVKLWNLQ 606
>PEX7_MOUSE (P97865) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 70 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP 216 T K G V H +++ W + R L+++GS D+TV+ W P Sbjct: 92 TAKATGPLQVYKEHTQEVYSVDW---SQTRGEQLVVSGSWDQTVKVWDP 137
>PEX7_CRIGR (Q8R537) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 70 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP 216 T K G V H +++ W + R L+++GS D+TV+ W P Sbjct: 92 TAKATGPLQVYKEHTQEVYSVDW---SQTRGEQLVVSGSWDQTVKVWDP 137
>IFA1_CAEEL (P90901) Intermediate filament protein ifa-1 (Intermediate filament| protein A1) (IF-A1) (Cel IF A1) Length = 575 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -3 Query: 269 TTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 111 TTPSA P GG T + Q R + + +RS A S G AA+ I S Sbjct: 14 TTPSARAPLGGRTTGNVTS-QDRMLKIVTEMRSGAGSGLSPFGQNAASTIRDS 65
>DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently-linked cell| wall protein 13) Length = 298 Score = 29.6 bits (65), Expect = 5.6 Identities = 24/67 (35%), Positives = 32/67 (47%) Frame = -3 Query: 263 PSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTDLNP 84 P++ A +T+ +S + SS E SSA +AA TQA ESS A ST + Sbjct: 122 PASTTEASSTSTSEASSAATESSSSSE---SSAETSSNAASTQATVSSESSSAASTIASS 178 Query: 83 ASFIVPS 63 A V S Sbjct: 179 AESSVAS 185
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 DPG G E PP G+ G PGA G GE+ +G + G PG Sbjct: 16 DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGGQGEKGAKGEAGAEGPPG 66
>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)| Length = 505 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/86 (24%), Positives = 35/86 (40%) Frame = +1 Query: 163 TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 T +LTG D+ V + + + GH+ V S+ S D+ IR++ Sbjct: 235 TNKILTGGADKNVIVFDKSSEQILAT-LKGHSKKVTSVVFHPSQDLVFSASPDATIRIWS 293 Query: 343 VDSGASVTTLDAAPSEVWGVQFHPKG 420 V + + V + A V G+ H G Sbjct: 294 VPNASCVQVVRAHEGSVTGLSLHATG 319
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 +PG +G E G G+I GLPG G GE RG S G PG Sbjct: 671 EPGPKGEQGASGEEGEAGERGELGDI-GLPGPKGSAGNPGEPGLRGPEGSRGLPG 724 Score = 29.6 bits (65), Expect = 5.6 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 13/77 (16%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGH 139 PG +GD + PP G GE G PGADGL G G+ G Sbjct: 286 PGIDGIDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGE 345 Query: 138 PG-----GRPDRVLVSP 103 PG G P R + P Sbjct: 346 PGVPGSRGFPGRGIPGP 362 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG M + G ++ PP G G GLPG+ G + G G + S G PG Sbjct: 597 PGQMGNSGKPGQQGPPGEVGPRGP-QGLPGSRGELGPVGSPGLPGKLGSLGSPG 649 Score = 29.3 bits (64), Expect = 7.4 Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Frame = -2 Query: 294 PGGMRSEGDHSER-VPPCRG-------GRDGE--IVGLPGADGLVDRAGEEQRRGAVVSS 145 PG + S+G E VP RG G G GLPG G V G+ RRG Sbjct: 334 PGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPP 393 Query: 144 GHPGGR 127 G PG R Sbjct: 394 GPPGPR 399
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 29.6 bits (65), Expect = 5.6 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 12/88 (13%) Frame = -2 Query: 228 GEIVGLPGADGLVDRAGEEQRRGAVVS-------SGHPGGRPDRVLV----SPVHRLEPR 82 G+ VG + RA EEQRRG S SG GGR D P R +PR Sbjct: 411 GDSVGTIFREAREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPR 470 Query: 81 KLHRTLSSLSQT-KP*VFDLAAEARGGG 1 ++ +QT KP V AA+A G Sbjct: 471 VEGEAPAAAAQTEKPVVAAAAAQAPSVG 498
>GLE2_YEAST (P40066) Nucleoporin GLE2 (Nuclear pore protein GLE2) (poly(A) RNA| export protein RAE1) Length = 365 Score = 29.6 bits (65), Expect = 5.6 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 2/140 (1%) Frame = +1 Query: 97 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 276 ++ EDSI A+ P D +A S D VR W + + V+ Sbjct: 31 INSPAEDSISDIAFSPQQDFMFSA----SSWDGKVRIWDVQNGVPQGRAQHESSSPVLCT 86 Query: 277 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTT-LDAAPSEVWG-VQFHPKGIXXXXXXXXX 450 D+ ++++D+ SG + + +AP +V VQ P Sbjct: 87 RWSNDGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTGSWD 146 Query: 451 XXVKLWDTEKWQPIASLPVP 510 +K WD + QP++++ +P Sbjct: 147 KTIKYWDMRQPQPVSTVMMP 166
>CI112_HUMAN (Q9BTV6) WD repeat-containing protein C9orf112| Length = 452 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Frame = +1 Query: 133 AWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 312 AW+ A ++ ++ +G D +R W + H +GV S+ Sbjct: 198 AWIAAFNYWHPEIVYSGGDDGLLRGWDTRVPGKFLFTSKRHTMGVCSIQSSPHREHILAT 257 Query: 313 -SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 S D HI ++D + VW +++HP Sbjct: 258 GSYDEHILLWDTRNMKQPLADTPVQGGVWRIKWHP 292
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 5.6 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG + G R P GR GE GLPG+ G + AG+E G G PG Sbjct: 420 PGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPG 478
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX-XXXXXXXXVSIDSHIRVFDVD 348 L T S D+TVR W D+ + GH+ V SL D+ IR + ++ Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767 Query: 349 SGASVTTLDAAPSEVWGVQFHPK 417 +G+ ++ ++F P+ Sbjct: 768 NGSCTRVYKGGSTQ---IRFQPR 787
>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 456 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G+ E P R GR G + G+PG G G +G + G PG R Sbjct: 113 PGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSR 170
>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)| Length = 831 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%) Frame = +1 Query: 19 SSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADH----RPTALLLTGS 186 S ++K F +++ T ++V HE+ + A W P+ + LL+ S Sbjct: 251 SLRLKENTFTIKDGGVRTTVAVTLETVLAGHENWVNAVHWQPSFYKDGVLQQPVRLLSAS 310 Query: 187 IDETVRAWQPDDLA------VASPPAGGHALG 264 +D+T+ W PD+ + V GG+ LG Sbjct: 311 MDKTMILWAPDEESGVWLEQVRVGEVGGNTLG 342
>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage| protein 23) Length = 665 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 +++G D T++ W D + S GH V+ L S D+ +RV+DV++ Sbjct: 235 IVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVLCLQYDNRVIISG--SSDATVRVWDVET 291 Query: 352 GASVTTL 372 G + TL Sbjct: 292 GECIKTL 298
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 10/60 (16%) Frame = -2 Query: 273 GDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 124 G ER P G GE GLPGA+GL GE+ +G V G PG G+P Sbjct: 70 GPPGERGPLGLPGEKGETGLRGPPGPAGLPGANGLNGDIGEKGDQGPVGLPGVPGIPGKP 129
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG S G R P GR GE GLPG+ G V +G+E G G PG Sbjct: 426 PGNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPG 484
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Frame = -2 Query: 294 PGGMRSE-------GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVV 151 P G+R E GD PP G GE + G PG GL GE +GA+ Sbjct: 687 PQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMG 746 Query: 150 SSGHPGGRPDR 118 +G G + R Sbjct: 747 PAGPDGQQGPR 757
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 7.4 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRR---GAVVS 148 PG EG R P G G G PGADG+ G R GAV Sbjct: 449 PGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGAVGP 508 Query: 147 SGHPG--GRP 124 G PG GRP Sbjct: 509 KGSPGEAGRP 518 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 G +G E PP G G G PGADG G G + G PG R Sbjct: 351 GSEGPQGSRGEPGPPGPAGAAGP-AGNPGADGQPGAKGATGAPGIAGAPGFPGAR 404
>CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor| Length = 1019 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG GD E PP GR+G + G PG G G++ RG G PG Sbjct: 434 PGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPG 492
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.3 bits (64), Expect = 7.4 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 591 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 645
>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%) Frame = +1 Query: 145 AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 321 AA H L+++G+ D V+ W+ ++ A GH V S D Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270 Query: 322 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 IRV+D+ V T W + HP Sbjct: 271 KSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%) Frame = +1 Query: 145 AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 321 AA H L+++G+ D V+ W+ ++ A GH V S D Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270 Query: 322 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 414 IRV+D+ V T W + HP Sbjct: 271 KSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG + S G ++ PP G G GLPG+ G V G G + S G PG Sbjct: 597 PGQLGSSGKPGQQGPPGEVGPRGPR-GLPGSRGPVGPEGSPGIPGKLGSVGSPG 649
>PK1IP_MOUSE (Q9DCE5) p21-activated protein kinase-interacting protein 1| (PAK1-interacting protein 1) (Putative PAK inhibitor Skb15) Length = 382 Score = 29.3 bits (64), Expect = 7.4 Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 13/108 (12%) Frame = +1 Query: 136 WVPAAD---HRPTALL----------LTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 276 W P AD H TA L ++GS DET+ + D A H G V+ Sbjct: 30 WTPVADFTHHSHTASLSVLASNSRYVVSGSKDETIHIY--DMKRKVEHGALVHHAGTVTC 87 Query: 277 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 + D HI ++DV + T A V + HP G Sbjct: 88 LKFHGNQHLISGAEDGHICIWDVKRWKCLKTFKAHRGHVTFLSIHPSG 135
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 29.3 bits (64), Expect = 7.4 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 631 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 685
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 106 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 210 AHE IW+ AW P +L +GS D T + W Sbjct: 373 AHEGMIWSLAWHPLGH-----ILCSGSNDHTSKFW 402 Score = 28.9 bits (63), Expect = 9.6 Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 1/139 (0%) Frame = +1 Query: 88 FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 267 F+++ AH+ + A W +LT V+ WQ + V A A+ Sbjct: 153 FETILQAHDSPVRAMTW-----SHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIRE 207 Query: 268 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP-KGIXXXXXXX 444 S S D +R++D L ++V V +HP KG+ Sbjct: 208 ASFSPTDNKFAT--CSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKD 265 Query: 445 XXXXVKLWDTEKWQPIASL 501 +K WD + Q +A+L Sbjct: 266 SQQPIKFWDPKTGQSLATL 284
>PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Neuronal| differentiation-related gene protein) Length = 504 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/86 (25%), Positives = 35/86 (40%) Frame = +1 Query: 163 TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 T +LTG D+ V + + + GH V S+ S D+ IR++ Sbjct: 234 TNKILTGGADKNVVVFDKSTEQILAT-LKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292 Query: 343 VDSGASVTTLDAAPSEVWGVQFHPKG 420 V + + V + A S V G+ H G Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATG 318
>PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear| matrix protein 200) (Nuclear matrix protein SNEV) Length = 504 Score = 29.3 bits (64), Expect = 7.4 Identities = 22/86 (25%), Positives = 35/86 (40%) Frame = +1 Query: 163 TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 342 T +LTG D+ V + + + GH V S+ S D+ IR++ Sbjct: 234 TNKILTGGADKNVVVFDKSTEQILAT-LKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292 Query: 343 VDSGASVTTLDAAPSEVWGVQFHPKG 420 V + + V + A S V G+ H G Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATG 318
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 29.3 bits (64), Expect = 7.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -2 Query: 249 PCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 P + G+ GE + GLPG DGL R G +GA G G Sbjct: 67 PGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLG 107
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG S G S P C GG+ G+PG +G G+ RG + G PG Sbjct: 49 PGRPGSPG--SSGPPGCPGGQ-----GIPGLEGHPGEVGDPGPRGLLGDPGRPG 95
>WDR24_BRARE (Q7ZVL2) WD-repeat protein 24| Length = 779 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 480 S D ++ FD+ SV+T V VQF K V+LWD + Sbjct: 134 SQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRR 189
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 28.9 bits (63), Expect = 9.6 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -2 Query: 297 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 D G M S+G +R P G G L G DGL GEE G + G PG Sbjct: 83 DFGDMGSKGARGDRGLPGSPGHPG----LQGLDGLPGLKGEEGIPGCNGTDGFPG 133
>PEX7_PICPA (O59894) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 376 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/34 (52%), Positives = 19/34 (55%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 210 HE +I AW P H PT LL T S D TVR W Sbjct: 280 HEFAIRKLAWSP---HGPTQLL-TCSYDMTVRVW 309
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 28.9 bits (63), Expect = 9.6 Identities = 24/65 (36%), Positives = 29/65 (44%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 115 PG G + PP G DG VG+PGA AG +G V + G PG R Sbjct: 256 PGSRGEPGAVGPKGPP---GVDG--VGIPGA------AGVPGPQGPVGAKGEPGLRGPPG 304 Query: 114 LVSPV 100 L+ PV Sbjct: 305 LIGPV 309 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Frame = -2 Query: 288 GMRSE----GDHSERVPPCRGGRDGEI-VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 124 G+R E GD R PP G G + +PG G G RG G PG R Sbjct: 137 GLRGEPGIRGDQGLRGPPGPPGLPGPSGITVPGKPGAQGAPGPPGFRGEPGPQGEPGPRG 196 Query: 123 DRVL 112 DR L Sbjct: 197 DRGL 200
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 28.9 bits (63), Expect = 9.6 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 121 PG +GD PP G +G+ G G + G+ RRG G PG G P Sbjct: 372 PGPKGEKGDTGPPGPPALPGS----LGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPG 427 Query: 120 RVLVSPVHR 94 + +H+ Sbjct: 428 PPGIQGIHQ 436
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -2 Query: 276 EGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 EG+ PP R G G G PG+ G + +G+ G S+G PG R Sbjct: 921 EGNSGNDGPPGRPGAAGFKGDRGEPGSPGALGSSGQPGPNGPAGSAGRPGNR 972
>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)| Length = 738 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 213 H ++WA +P L+LTGS D+TV+ W+ Sbjct: 93 HTAAVWAVKILPEQ-----GLMLTGSADKTVKLWK 122
>CO4A3_BOVIN (Q28084) Collagen alpha-3(IV) chain (Fragment)| Length = 471 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PG G + PP G G +I+ LPG+ G AGE +G G PG Sbjct: 127 PGPPGPPGQSGPKGPPGVRGEPGTVKIISLPGSPGPPGSAGEPGMQGEPGPPGPPG 182
>WDR34_MOUSE (Q5U4F6) WD-repeat protein 34| Length = 535 Score = 28.9 bits (63), Expect = 9.6 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 28/126 (22%) Frame = +1 Query: 100 DGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ--------------------PD 219 D H D ++ W+P H +L+ + D V W+ P Sbjct: 261 DDTHTDPVYQVLWLPEPRHSHRFQVLSAATDGKVLLWRGSGAGQLRLTKGFALAVQQLPR 320 Query: 220 DLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSG--------ASVTTLD 375 + PP G +GV S+ S DS + V + G + V L Sbjct: 321 STKLKKPPRGETEVGVTSVAFS---------SFDSSLFVLGTEGGFPLKCSLASEVAALT 371 Query: 376 AAPSEV 393 PS V Sbjct: 372 RMPSSV 377
>MIAA_CAUCR (Q9A6J5) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 295 Score = 28.9 bits (63), Expect = 9.6 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 188 IEPVRSSAVGRWSAAGTQAAAQIESS*APS 99 ++P +VGRW A TQA A+I++ P+ Sbjct: 71 VDPALGWSVGRWLEAATQALAEIQARGKPA 100
>GBLP_BRANA (Q39336) Guanine nucleotide-binding protein beta subunit-like| protein Length = 327 Score = 28.9 bits (63), Expect = 9.6 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 3/127 (2%) Frame = +1 Query: 136 WVPAADHRPTAL---LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXX 306 WV P L +++ S D+TV+ W + + S A GH V ++ Sbjct: 152 WVSCVRFSPNTLQPTIVSASCDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCA 210 Query: 307 XVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQ 486 D + ++D+ G + +L+ A S + + F P +K+WD E Sbjct: 211 SGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFTPN--RYWLCAATEQGIKIWDLESKT 267 Query: 487 PIASLPV 507 + L V Sbjct: 268 VVEDLKV 274
>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 889 Score = 28.9 bits (63), Expect = 9.6 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 477 S D IRVF+ ++G V +A P + + HP VKLW+ E Sbjct: 74 SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWE 127
>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1888 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 291 GGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 127 G +G +R P + G G VG+PGA G+ G + +G V + G PG + Sbjct: 1552 GSPGRDGAQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGITGSQGPQGDVGAPGAPGPK 1611 Query: 126 PDR 118 +R Sbjct: 1612 GER 1614
>RUMA_XYLFT (Q87BR3) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 443 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -2 Query: 228 GEIVGLPGADGLVDRAGEEQRRGAV 154 GE+VG+ G GLV+RA E RR + Sbjct: 319 GEVVGVEGDIGLVERARENARRNGL 343
>REC14_SCHPO (Q09150) Meiotic recombination protein rec14| Length = 302 Score = 28.9 bits (63), Expect = 9.6 Identities = 10/57 (17%), Positives = 25/57 (43%) Frame = +1 Query: 250 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 420 GHA + ++ ++ I+++D+D+ ++T +W V ++ G Sbjct: 227 GHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVAWYKNG 283
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -2 Query: 294 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 133 PGG G ER PP + G PG G G E +GA G PG Sbjct: 671 PGGKGDAGAPGERGPP-------GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG 717
>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS| box-containing WD protein SWiP-1) Length = 421 Score = 28.9 bits (63), Expect = 9.6 Identities = 21/101 (20%), Positives = 35/101 (34%) Frame = +1 Query: 169 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 +L++ S D+T+R W D GH V S V + ++++D Sbjct: 185 ILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMD 244 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 + L+ +V F P G V +WD Sbjct: 245 KYTMIRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWD 284
>TUP1_KLULA (P56094) Transcriptional repressor TUP1| Length = 682 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/90 (25%), Positives = 40/90 (44%) Frame = +1 Query: 109 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 288 HE I++ + P+ + L++GS D TVR W + + + V++ Sbjct: 447 HEQDIYSLDYFPSGNK-----LVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGE 501 Query: 289 XXXXXXXVSIDSHIRVFDVDSGASVTTLDA 378 S+D +RV+D D+G V LD+ Sbjct: 502 GKFIAAG-SLDRTVRVWDSDTGFLVERLDS 530
>NIRF_PSEAE (Q51480) Protein nirF| Length = 392 Score = 28.9 bits (63), Expect = 9.6 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 1/131 (0%) Frame = +1 Query: 133 AWVPAADHRPTALLLTGSIDETVRAW-QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 309 A+VPA H +L R W Q D + VA P + V++ Sbjct: 263 AFVPAVGHHQVLVL-------DARDWKQTDAIDVAGQP-----VFVMTRPDDRQIWVNFA 310 Query: 310 VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWQP 489 + ++V D ++ + TL P V ++F +G +++WD + + Sbjct: 311 YPDNDKVQVIDSETHEVIETLRPGPG-VLHMEFSGRGDQVWISVRDADQLQVWDPYRLKR 369 Query: 490 IASLPVPRPEG 522 I SLP P G Sbjct: 370 IGSLPARSPSG 380
>FIE2_MAIZE (Q8VZY6) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT| ENDOSPERM 2) Length = 379 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +1 Query: 313 SIDSHIRVFDVDSGASVTTLDAAP---SEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKW 483 S D +R+++V +G + A +EV V FHP I VK+W +++ Sbjct: 153 SKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIERFASCGMDNTVKIWSMKEF 212
>PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1| Length = 514 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Frame = +1 Query: 175 LTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 +TGS D T++ W DLA GH V + D ++ +D++ Sbjct: 220 VTGSADRTIKIW---DLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLE 276 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 + S V+G+ HP I ++WD Sbjct: 277 YNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWD 316
>PLRG1_HUMAN (O43660) Pleiotropic regulator 1| Length = 514 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Frame = +1 Query: 175 LTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 348 +TGS D T++ W DLA GH V + D ++ +D++ Sbjct: 220 VTGSADRTIKIW---DLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLE 276 Query: 349 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 471 + S V+G+ HP I ++WD Sbjct: 277 YNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWD 316
>GBB_LOLFO (P23232) Guanine nucleotide-binding protein beta subunit| Length = 341 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/83 (22%), Positives = 32/83 (38%) Frame = +1 Query: 172 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 351 ++T S D T W + GGH V+SL + D+ ++FD+ Sbjct: 158 IVTSSGDMTCALWNIET-GNQITSFGGHTGDVMSLSLAPDMRTFVSGACDASAKLFDIRD 216 Query: 352 GASVTTLDAAPSEVWGVQFHPKG 420 G T S++ + + P G Sbjct: 217 GICKQTFTGHESDINAITYFPNG 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,719,791 Number of Sequences: 219361 Number of extensions: 1199523 Number of successful extensions: 6310 Number of sequences better than 10.0: 233 Number of HSP's better than 10.0 without gapping: 4821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6157 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
