>ATPG3_ARATH (Q96250) ATP synthase gamma chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 325

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 21/50 (42%), Positives = 24/50 (48%)
 Frame = +2

Query: 8   MAMAALRREGRRVLLSTXXXXXXXXXXXXXXXXXXXXXLGARTISTQIVR 157
           MAMA  RREGRR LL +                     LG R+ISTQ+VR
Sbjct: 1   MAMAVFRREGRR-LLPSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVR 49

>ATPG3_IPOBA (P26360) ATP synthase gamma chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 326

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 8   MAMAALRREGRRVLLS--TXXXXXXXXXXXXXXXXXXXXXLGARTISTQIVR 157
           MAMAALRREGRR+  +  T                      G R+ISTQ+VR
Sbjct: 1   MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVR 52

>LMBL3_HUMAN (Q96JM7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein) (H-l(3)mbt-like protein)
          Length = 780

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = +1

Query: 19  CPKTRGAACPPLHPLT---GSRHG-CALPGCLPVAH 114
           C KT     PPL PL     S HG C+ PGC  + H
Sbjct: 533 CSKTGHPLQPPLSPLELMEASEHGGCSTPGCKGIGH 568

>STK19_HUMAN (P49842) Serine/threonine-protein kinase 19 (EC 2.7.11.1) (Protein|
           RP1) (Protein G11)
          Length = 368

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 101 RQPGSAQPWRLPVRGWRG 48
           R PG A PWR P+RG RG
Sbjct: 48  RVPGRACPWREPIRGRRG 65

>USP_MANSE (P54779) Protein ultraspiracle homolog|
          Length = 461

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 13  DGCPKTRGAACPPLHPLTGSRHGCALPG 96
           D  P       PP HPL+GS+H C++ G
Sbjct: 90  DSTPPPAFKNYPPNHPLSGSKHLCSICG 117

>USP_CHOFU (O76202) Protein ultraspiracle homolog|
          Length = 472

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 46  PPLHPLTGSRHGCALPG 96
           PP HPL+GS+H C++ G
Sbjct: 107 PPNHPLSGSKHLCSICG 123

>USP_DROME (P20153) Protein ultraspiracle (XR2C) (Chorion factor 1)|
          Length = 508

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 46  PPLHPLTGSRHGCALPG 96
           PP HPL+GS+H C++ G
Sbjct: 92  PPNHPLSGSKHLCSICG 108

>USP_BOMMO (P49700) Protein ultraspiracle homolog (RXR type hormone receptor|
           CF1) (BmCF1)
          Length = 462

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 46  PPLHPLTGSRHGCALPG 96
           PP HPL+GS+H C++ G
Sbjct: 102 PPNHPLSGSKHLCSICG 118

>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 125 QAEQCATGRQPGSAQPWRLPVRGWRGG 45
           Q +Q   G+QPG  QPW  P      G
Sbjct: 635 QGQQPGQGQQPGQGQPWYYPTSPQESG 661

>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor|
          Length = 838

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 125 QAEQCATGRQPGSAQPWRLPVRGWRGG 45
           Q +Q   G+QPG  QPW  P      G
Sbjct: 628 QGQQPGQGQQPGQGQPWYYPTSPQESG 654

>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 10  GDGCPKTRGAACPPLHPLTGSRHGCALPGCLPV 108
           G G   ++G + P +HP +   H CA P  LPV
Sbjct: 480 GPGPNMSQGHSSPVMHPGSPGHHPCAGPPGLPV 512

>CN139_HUMAN (Q9H761) Protein C14orf139|
          Length = 190

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 137 WSVHQAEQCATGRQPGSAQPWR 72
           WS  Q  +C  G+QP S QP R
Sbjct: 121 WSHDQKPECGEGQQPASEQPAR 142

>ZN202_HUMAN (O95125) Zinc finger protein 202|
          Length = 648

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 49  PLHPLTGSRHGCALPGCLPVAHCSAWCTDHLNTNCEE 159
           P+HPL G  H C++  C     C++    HL T+  E
Sbjct: 388 PVHPLLGRHHDCSV--CGKSFTCNSHLVRHLRTHTGE 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,172,441
Number of Sequences: 219361
Number of extensions: 428920
Number of successful extensions: 1416
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)