Clone Name | bart42g08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_450983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3192 Score = 424 bits (214), Expect = e-115 Identities = 445/522 (85%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 ||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1010 tttgatcgtgtattgtgtgatgtgccttgtagtggtgatggaactgtgcgtaaagctcct 1069 Query: 61 ggtatgtggagaacatggaatattggcatgggtaatggacttcatcgtctccaagtggaa 120 | ||||||||||| |||||| ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 1070 gatatgtggagaaagtggaatgctggtatggggaatggactccatcgtctccaagtagaa 1129 Query: 121 atagctatgcgtggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgc 180 || || ||||| || |||| |||||||||||||| |||||||| || ||||||||||| Sbjct: 1130 attgcaatgcgcggtattggtttgcttaaagtgggtggaaggattgtttactcaacatgt 1189 Query: 181 tcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcggagatgtggggat 240 |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 1190 tcaatgaatcctgttgaaaatgaagcagttgtcgcggagattctacggagatgtggggat 1249 Query: 241 tctgttgaactccttgatgtttctaatgagctacctgaattgatccgccgtcctggactt 300 ||||||||||| ||||||||||||||||||||||||||||| || | |||||||||||| Sbjct: 1250 tctgttgaacttcttgatgtttctaatgagctacctgaattagtcaggcgtcctggactt 1309 Query: 301 aggacctggaaggtacgggatagagcgtcttggttgggcagtcataaagatgtacttcac 360 || |||||||||||||||||||||| ||||||||| |||| ||| ||||||| | || | Sbjct: 1310 agcacctggaaggtacgggatagagggtcttggtttggcactcacgaagatgtccctcgc 1369 Query: 361 tacaggaagaatgtgatattgccaagtatgttcccctcgggtaaaggtagcatggatagc 420 ||||| ||||| ||||||| ||||| ||||| || || || || || | |||||||||| Sbjct: 1370 tacagaaagaacgtgatatcaccaagcatgtttccttcagggaagggcaccatggatagc 1429 Query: 421 tgtacggcgggtggcagtgttgaggtcagcatagatgcagttgatgcagatatgaatgag 480 | ||| ||||||||||||| ||| || ||||| | ||||||| |||||||| || Sbjct: 1430 catgtggctattggcagtgttgagatcaacacagatgtaattgatgctgatatgaaagat 1489 Query: 481 tcaggggatatggtagagggaaaacaagaaacgaaaatagca 522 ||| | |||||||||||| ||||||||||||||| |||| Sbjct: 1490 tcaacaaacatggtagagggagaacaagaaacgaaaacagca 1531
>dbj|AK073815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065D05, full insert sequence Length = 3191 Score = 416 bits (210), Expect = e-113 Identities = 444/522 (85%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 ||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1010 tttgatcgtgtattgtgtgatgtgccttgtagtggtgatggaactgtgcgtaaagctcct 1069 Query: 61 ggtatgtggagaacatggaatattggcatgggtaatggacttcatcgtctccaagtggaa 120 | ||||||||||| |||||| ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 1070 gatatgtggagaaagtggaatgctggtatggggaatggactccatcgtctccaagtagaa 1129 Query: 121 atagctatgcgtggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgc 180 || || ||||| || |||| |||||||||||||| |||||||| || ||||||||||| Sbjct: 1130 attgcaatgcgcggtattggtttgcttaaagtgggtggaaggattgtttactcaacatgt 1189 Query: 181 tcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcggagatgtggggat 240 ||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 1190 tcaatgaatcctgttgaaaatgaagtagttgtcgcggagattctacggagatgtggggat 1249 Query: 241 tctgttgaactccttgatgtttctaatgagctacctgaattgatccgccgtcctggactt 300 ||||||||||| ||||||||||||||||||||||||||||| || | |||||||||||| Sbjct: 1250 tctgttgaacttcttgatgtttctaatgagctacctgaattagtcaggcgtcctggactt 1309 Query: 301 aggacctggaaggtacgggatagagcgtcttggttgggcagtcataaagatgtacttcac 360 || |||||||||||||||||||||| ||||||||| |||| ||| ||||||| | || | Sbjct: 1310 agcacctggaaggtacgggatagagggtcttggtttggcactcacgaagatgtccctcgc 1369 Query: 361 tacaggaagaatgtgatattgccaagtatgttcccctcgggtaaaggtagcatggatagc 420 ||||| ||||| ||||||| ||||| ||||| || || || || || | |||||||||| Sbjct: 1370 tacagaaagaacgtgatatcaccaagcatgtttccttcagggaagggcaccatggatagc 1429 Query: 421 tgtacggcgggtggcagtgttgaggtcagcatagatgcagttgatgcagatatgaatgag 480 | ||| ||||||||||||| ||| || ||||| | ||||||| |||||||| || Sbjct: 1430 catgtggctattggcagtgttgagatcaacacagatgtaattgatgctgatatgaaagat 1489 Query: 481 tcaggggatatggtagagggaaaacaagaaacgaaaatagca 522 ||| | |||||||||||| ||||||||||||||| |||| Sbjct: 1490 tcaacaaacatggtagagggagaacaagaaacgaaaacagca 1531
>gb|AY105538.1| Zea mays PCO081607 mRNA sequence Length = 2791 Score = 343 bits (173), Expect = 4e-91 Identities = 434/521 (83%) Strand = Plus / Plus Query: 16 tgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcctggtatgtggagaaca 75 ||||| ||||| |||||||| ||||| ||||||||||||||||||| ||||||||| | Sbjct: 698 tgtgacgtgccttgtagtggcgatgggactgtccgtaaggctcctgatatgtggaggaag 757 Query: 76 tggaatattggcatgggtaatggacttcatcgtctccaagtggaaatagctatgcgtggc 135 |||||| ||| ||||| || |||||||||| || ||||||||||| ||||||||||| Sbjct: 758 tggaatgctggtatggggaacggacttcatcacctgcaagtggaaattgctatgcgtggt 817 Query: 136 attgcattgcttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcctgtt 195 || ||||| |||||||| || |||||||| || || ||||| |||||||| |||||| Sbjct: 818 atgagcttgctcaaagtgggtgggaggatggtttattcgacatgttcaatgaaccctgtt 877 Query: 196 gaaaatgaagctgttgttggtgagattctgcggagatgtggggattctgttgaactcctt 255 ||||| |||| ||||||| ||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 878 gaaaacgaaggcgttgttgctgagattttgcggagatgtggggactctgttgaacttctt 937 Query: 256 gatgtttctaatgagctacctgaattgatccgccgtcctggacttaggacctggaaggta 315 |||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||| Sbjct: 938 gatgtttctaatgaactacctgaattagcccgtcgtcctggacttagcacctggaaggta 997 Query: 316 cgggatagagcgtcttggttgggcagtcataaagatgtacttcactacaggaagaatgtg 375 |||||||||| ||||||||| || |||| ||||||||| || |||||||||| ||||| Sbjct: 998 cgggatagagggtcttggtttggtgttcatgaagatgtacctcgctacaggaagcatgtg 1057 Query: 376 atattgccaagtatgttcccctcgggtaaaggtagcatggatagctgtacggcgggtggc 435 |||| |||||||||| || || || ||||| |||| ||||| |||||| | | || Sbjct: 1058 atatcagcaagtatgtttccttctgggaaaggcagcaaagatagtggtacggggagcagc 1117 Query: 436 agtgttgaggtcagcatagatgcagttgatgcagatatgaatgagtcaggggatatggta 495 || |||||||||| || ||||| || ||||||||| ||||| || ||| || |||| | Sbjct: 1118 agcgttgaggtcaacacagatgtagctgatgcagacatgaaggattcaacagacatggga 1177 Query: 496 gagggaaaacaagaaacgaaaatagcaattgatgacagcaa 536 |||||| |||||||||| | || |||||||||||||||| Sbjct: 1178 gagggagaacaagaaacaactgtaacaattgatgacagcaa 1218
>ref|XM_483023.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2732 Score = 281 bits (142), Expect = 1e-72 Identities = 271/314 (86%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 |||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| || | Sbjct: 923 tttgatcgggtactttgtgatgtcccctgtagtggtgatggaactatccgcaagggtcat 982 Query: 61 ggtatgtggagaacatggaatattggcatgggtaatggacttcatcgtctccaagtggaa 120 | |||||||||| ||||| |||||||| ||||||||||||| ||||||||| || Sbjct: 983 gacatgtggagaaagtggaactcaggcatggggaatggacttcatcttctccaagtagat 1042 Query: 121 atagctatgcgtggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgc 180 || |||||||||||||||| || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1043 atttctatgcgtggcattgccttacttaaagtgggtggaaggatggtttactcaacttgc 1102 Query: 181 tcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcggagatgtggggat 240 |||||||||||||||||||||||||||||| | | |||| |||| |||||| |||| || Sbjct: 1103 tcaatgaatcctgttgaaaatgaagctgttatagctgagcttcttcggagaagtggaaat 1162 Query: 241 tctgttgaactccttgatgtttctaatgagctacctgaattgatccgccgtcctggactt 300 ||||| || || ||||||||||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 1163 tctgtcgagcttcttgatgtttctaatgagctaccagaattggtccaccgtcctggactt 1222 Query: 301 aggacctggaaggt 314 || || |||||||| Sbjct: 1223 agcacttggaaggt 1236
>dbj|AK065727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035I17, full insert sequence Length = 2732 Score = 281 bits (142), Expect = 1e-72 Identities = 271/314 (86%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 |||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| || | Sbjct: 923 tttgatcgggtactttgtgatgtcccctgtagtggtgatggaactatccgcaagggtcat 982 Query: 61 ggtatgtggagaacatggaatattggcatgggtaatggacttcatcgtctccaagtggaa 120 | |||||||||| ||||| |||||||| ||||||||||||| ||||||||| || Sbjct: 983 gacatgtggagaaagtggaactcaggcatggggaatggacttcatcttctccaagtagat 1042 Query: 121 atagctatgcgtggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgc 180 || |||||||||||||||| || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1043 atttctatgcgtggcattgccttacttaaagtgggtggaaggatggtttactcaacttgc 1102 Query: 181 tcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcggagatgtggggat 240 |||||||||||||||||||||||||||||| | | |||| |||| |||||| |||| || Sbjct: 1103 tcaatgaatcctgttgaaaatgaagctgttatagctgagcttcttcggagaagtggaaat 1162 Query: 241 tctgttgaactccttgatgtttctaatgagctacctgaattgatccgccgtcctggactt 300 ||||| || || ||||||||||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 1163 tctgtcgagcttcttgatgtttctaatgagctaccagaattggtccaccgtcctggactt 1222 Query: 301 aggacctggaaggt 314 || || |||||||| Sbjct: 1223 agcacttggaaggt 1236
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 137 bits (69), Expect = 4e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 218 agattctgcggagatgtggggattctgttgaactccttgatgtttctaatgagctacctg 277 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17963045 agattctacggagatgtggggattctgttgaacttcttgatgtttctaatgagctacctg 17963104 Query: 278 aattgatccgccgtcctggacttaggacctggaaggt 314 |||| || | |||||||||||||| ||||||||||| Sbjct: 17963105 aattagtcaggcgtcctggacttagcacctggaaggt 17963141 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 142 ttgcttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcctgttgaaaat 201 |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 17962691 ttgcttaaagtgggtggaaggattgtttactcaacatgttcaatgaatcctgttgaaaat 17962750 Query: 202 gaagctgttgt 212 ||||| ||||| Sbjct: 17962751 gaagcagttgt 17962761 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 ||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 17962002 tttgatcgtgtattgtgtgatgtgccttgtagtggtgatggaactgtgcgtaaagctcct 17962061 Query: 61 ggtatgtggagaa 73 | ||||||||||| Sbjct: 17962062 gatatgtggagaa 17962074 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 311 aggtacgggatagagcgtcttggttgggcagtcataaagatgtacttcactacaggaaga 370 ||||||||||||||| ||||||||| |||| ||| ||||||| | || |||||| |||| Sbjct: 17963788 aggtacgggatagagggtcttggtttggcactcacgaagatgtccctcgctacagaaaga 17963847 Query: 371 atgtgatattgccaagtatgttcccctcgggtaaaggtagcatggatagctgtacggcgg 430 | ||||||| ||||| ||||| || || || || || | |||||||||| | ||| Sbjct: 17963848 acgtgatatcaccaagcatgtttccttcagggaagggcaccatggatagccatgtggcta 17963907 Query: 431 gtggcagtgttgaggtcagcatagatgcagttgatgcagatatgaatgagtcaggggata 490 ||||||||||||| ||| || ||||| | ||||||| |||||||| || ||| | | Sbjct: 17963908 ttggcagtgttgagatcaacacagatgtaattgatgctgatatgaaagattcaacaaaca 17963967 Query: 491 tggtagagggaaaacaagaaacgaaaatagca 522 ||||||||||| ||||||||||||||| |||| Sbjct: 17963968 tggtagagggagaacaagaaacgaaaacagca 17963999 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 88 atgggtaatggacttcatcgtctccaagtggaaatagctatgcg 131 ||||| |||||||| |||||||||||||| ||||| || ||||| Sbjct: 17962168 atggggaatggactccatcgtctccaagtagaaattgcaatgcg 17962211
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 137 bits (69), Expect = 4e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 218 agattctgcggagatgtggggattctgttgaactccttgatgtttctaatgagctacctg 277 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14699 agattctacggagatgtggggattctgttgaacttcttgatgtttctaatgagctacctg 14758 Query: 278 aattgatccgccgtcctggacttaggacctggaaggt 314 |||| || | |||||||||||||| ||||||||||| Sbjct: 14759 aattagtcaggcgtcctggacttagcacctggaaggt 14795 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 142 ttgcttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcctgttgaaaat 201 |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 14345 ttgcttaaagtgggtggaaggattgtttactcaacatgttcaatgaatcctgttgaaaat 14404 Query: 202 gaagctgttgt 212 ||||| ||||| Sbjct: 14405 gaagcagttgt 14415 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 ||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 13656 tttgatcgtgtattgtgtgatgtgccttgtagtggtgatggaactgtgcgtaaagctcct 13715 Query: 61 ggtatgtggagaa 73 | ||||||||||| Sbjct: 13716 gatatgtggagaa 13728 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 311 aggtacgggatagagcgtcttggttgggcagtcataaagatgtacttcactacaggaaga 370 ||||||||||||||| ||||||||| |||| ||| ||||||| | || |||||| |||| Sbjct: 15442 aggtacgggatagagggtcttggtttggcactcacgaagatgtccctcgctacagaaaga 15501 Query: 371 atgtgatattgccaagtatgttcccctcgggtaaaggtagcatggatagctgtacggcgg 430 | ||||||| ||||| ||||| || || || || || | |||||||||| | ||| Sbjct: 15502 acgtgatatcaccaagcatgtttccttcagggaagggcaccatggatagccatgtggcta 15561 Query: 431 gtggcagtgttgaggtcagcatagatgcagttgatgcagatatgaatgagtcaggggata 490 ||||||||||||| ||| || ||||| | ||||||| |||||||| || ||| | | Sbjct: 15562 ttggcagtgttgagatcaacacagatgtaattgatgctgatatgaaagattcaacaaaca 15621 Query: 491 tggtagagggaaaacaagaaacgaaaatagca 522 ||||||||||| ||||||||||||||| |||| Sbjct: 15622 tggtagagggagaacaagaaacgaaaacagca 15653 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 88 atgggtaatggacttcatcgtctccaagtggaaatagctatgcg 131 ||||| |||||||| |||||||||||||| ||||| || ||||| Sbjct: 13822 atggggaatggactccatcgtctccaagtagaaattgcaatgcg 13865
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 133 ggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcct 192 |||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 23923218 ggcattgccttacttaaagtgggtggaaggatggtttactcaacttgctcaatgaatcct 23923159 Query: 193 gttgaaaatgaagctgtt 210 |||||||||||||||||| Sbjct: 23923158 gttgaaaatgaagctgtt 23923141 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 221 ttctgcggagatgtggggattctgttgaactccttgatgtttctaatgagctacctgaat 280 |||| |||||| |||| ||||||| || || ||||||||||||||||||||||| |||| Sbjct: 23922254 ttcttcggagaagtggaaattctgtcgagcttcttgatgtttctaatgagctaccagaat 23922195 Query: 281 tgatccgccgtcctggacttaggacctggaaggtac 316 || ||| ||||||||||||||| || |||||||||| Sbjct: 23922194 tggtccaccgtcctggacttagcacttggaaggtac 23922159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 |||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| || | Sbjct: 23923804 tttgatcgggtactttgtgatgtcccctgtagtggtgatggaactatccgcaagggtcat 23923745 Query: 61 ggtatgtggagaa 73 | |||||||||| Sbjct: 23923744 gacatgtggagaa 23923732 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 85 ggcatgggtaatggacttcatcgtctccaagtggaaatagctatgcgtgg 134 |||||||| ||||||||||||| ||||||||| || || |||||||||| Sbjct: 23923635 ggcatggggaatggacttcatcttctccaagtagatatttctatgcgtgg 23923586
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 133 ggcattgcattgcttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcct 192 |||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 56369 ggcattgccttacttaaagtgggtggaaggatggtttactcaacttgctcaatgaatcct 56310 Query: 193 gttgaaaatgaagctgtt 210 |||||||||||||||||| Sbjct: 56309 gttgaaaatgaagctgtt 56292 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 221 ttctgcggagatgtggggattctgttgaactccttgatgtttctaatgagctacctgaat 280 |||| |||||| |||| ||||||| || || ||||||||||||||||||||||| |||| Sbjct: 55405 ttcttcggagaagtggaaattctgtcgagcttcttgatgtttctaatgagctaccagaat 55346 Query: 281 tgatccgccgtcctggacttaggacctggaaggtac 316 || ||| ||||||||||||||| || |||||||||| Sbjct: 55345 tggtccaccgtcctggacttagcacttggaaggtac 55310 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 1 tttgatcgtatactgtgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcct 60 |||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| || | Sbjct: 56955 tttgatcgggtactttgtgatgtcccctgtagtggtgatggaactatccgcaagggtcat 56896 Query: 61 ggtatgtggagaa 73 | |||||||||| Sbjct: 56895 gacatgtggagaa 56883 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 85 ggcatgggtaatggacttcatcgtctccaagtggaaatagctatgcgtgg 134 |||||||| ||||||||||||| ||||||||| || || |||||||||| Sbjct: 56786 ggcatggggaatggacttcatcttctccaagtagatatttctatgcgtgg 56737
>dbj|AK062110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B08, full insert sequence Length = 1884 Score = 101 bits (51), Expect = 2e-18 Identities = 177/219 (80%) Strand = Plus / Plus Query: 304 acctggaaggtacgggatagagcgtcttggttgggcagtcataaagatgtacttcactac 363 |||||||||||||||||||||| ||||||||| |||| ||| ||||||| | || |||| Sbjct: 3 acctggaaggtacgggatagagggtcttggtttggcactcacgaagatgtccctcgctac 62 Query: 364 aggaagaatgtgatattgccaagtatgttcccctcgggtaaaggtagcatggatagctgt 423 || ||||| ||||||| ||||| ||||| || || || || || | |||||||||| | Sbjct: 63 agaaagaacgtgatatcaccaagcatgtttccttcagggaagggcaccatggatagccat 122 Query: 424 acggcgggtggcagtgttgaggtcagcatagatgcagttgatgcagatatgaatgagtca 483 ||| ||||||||||||| ||| || ||||| | ||||||| |||||||| || ||| Sbjct: 123 gtggctattggcagtgttgagatcaacacagatgtaattgatgctgatatgaaagattca 182 Query: 484 ggggatatggtagagggaaaacaagaaacgaaaatagca 522 | |||||||||||| ||||||||||||||| |||| Sbjct: 183 acaaacatggtagagggagaacaagaaacgaaaacagca 221
>ref|NM_120164.3| Arabidopsis thaliana unknown protein AT4G40000 mRNA, complete cds Length = 3067 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttggtgagatt 222 ||||| |||||||| ||||||||||| || ||||| ||||||||||||||| ||| ||| Sbjct: 1062 atggtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttgctgaaatt 1121 Query: 223 ctgcggagatgtgg 236 ||| |||||||||| Sbjct: 1122 ctgaggagatgtgg 1135 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 16 tgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcc 59 |||||||| || |||||||||||||| ||| | || |||||||| Sbjct: 915 tgtgatgtcccgtgtagtggtgatggtactctgcgcaaggctcc 958
>ref|NM_179693.1| Arabidopsis thaliana unknown protein AT2G22400 mRNA, complete cds Length = 2678 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 169 tactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcgg 228 |||||||| ||||||||||| || || || ||||||||||||||| ||||||||| || Sbjct: 1099 tactcaacctgctcaatgaacccagtggaggatgaagctgttgttgctgagattctaagg 1158 Query: 229 agatgtggggattctgttgaact 251 || ||||| || ||||||||||| Sbjct: 1159 aggtgtggagactctgttgaact 1181
>gb|AY099759.1| Arabidopsis thaliana unknown protein (At2g22400) mRNA, complete cds Length = 2656 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 169 tactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttggtgagattctgcgg 228 |||||||| ||||||||||| || || || ||||||||||||||| ||||||||| || Sbjct: 1099 tactcaacctgctcaatgaacccagtggaggatgaagctgttgttgctgagattctaagg 1158 Query: 229 agatgtggggattctgttgaact 251 || ||||| || ||||||||||| Sbjct: 1159 aggtgtggagactctgttgaact 1181
>emb|CT030028.4| M.truncatula DNA sequence from clone MTH2-6B18 on chromosome 3, complete sequence Length = 85486 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 145 cttaaagtgggcggaaggatggtctactcaacatgctcaatgaatcctgttgaaaatgaa 204 |||||||| || ||||| ||||| || ||||| |||||||| |||||| |||| |||||| Sbjct: 24700 cttaaagttggtggaagaatggtttattcaacctgctcaataaatcctattgagaatgaa 24641 Query: 205 gctgt 209 ||||| Sbjct: 24640 gctgt 24636
>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92 Length = 112067 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttg 214 ||||| |||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 72776 atggtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttg 72725 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 16 tgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcc 59 |||||||| || |||||||||||||| ||| | || |||||||| Sbjct: 73084 tgtgatgtcccgtgtagtggtgatggtactctgcgcaaggctcc 73041
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project) Length = 118267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttg 214 ||||| |||||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 83343 atggtatactcaacctgctcaatgaacccaattgaagatgaagctgttgttg 83292 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 16 tgtgatgtgccctgtagtggtgatggaactgtccgtaaggctcc 59 |||||||| || |||||||||||||| ||| | || |||||||| Sbjct: 83651 tgtgatgtcccgtgtagtggtgatggtactctgcgcaaggctcc 83608
>ref|XM_448312.1| Candida glabrata CBS138, CAGL0K01991g partial mRNA Length = 2019 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 166 gtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgt 212 |||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 910 gtctactccacatgttcaatgaacccaattgaaaatgaagctgttgt 956
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 166 gtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgt 212 |||||||| ||||| |||||||| || ||||||||||||||||||| Sbjct: 174049 gtctactccacatgttcaatgaacccaattgaaaatgaagctgttgt 174095
>emb|Z99753.1|SPAC23C4 S.pombe chromosome I cosmid c23C4 Length = 38269 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 164 tggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgt 212 |||| |||||||||||||| || ||||| | ||||||||||||||||| Sbjct: 28604 tggtttactcaacatgctccattaatcccatagaaaatgaagctgttgt 28652
>ref|NM_001018585.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC23C4.17), partial mRNA Length = 2025 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 164 tggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgt 212 |||| |||||||||||||| || ||||| | ||||||||||||||||| Sbjct: 953 tggtttactcaacatgctccattaatcccatagaaaatgaagctgttgt 1001
>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete sequence Length = 106949 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 169 tactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttggtgag 219 |||||||| ||||||||||| || || || ||||||||||||||| |||| Sbjct: 87604 tactcaacctgctcaatgaacccagtggaggatgaagctgttgttgctgag 87654
>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence Length = 203073 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 aaaatagcaattgatgacagca 535 |||||||||||||||||||||| Sbjct: 114334 aaaatagcaattgatgacagca 114355
>gb|AC147977.2| Pan troglodytes BAC clone CH251-486H24 from 7, complete sequence Length = 213806 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gaatcctgttgaaaatgaagc 206 ||||||||||||||||||||| Sbjct: 79685 gaatcctgttgaaaatgaagc 79705
>gb|AC145999.3| Pan troglodytes BAC clone RP43-138L12 from 7, complete sequence Length = 182926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 gaatcctgttgaaaatgaagc 206 ||||||||||||||||||||| Sbjct: 72421 gaatcctgttgaaaatgaagc 72401
>gb|AC005019.1| Homo sapiens BAC clone GS1-250A16 from 7, complete sequence Length = 188362 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gaatcctgttgaaaatgaagc 206 ||||||||||||||||||||| Sbjct: 26493 gaatcctgttgaaaatgaagc 26513
>ref|XM_669963.1| Plasmodium berghei strain ANKA hypothetical protein (PB001227.00.0) partial mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tgtgatgtgccctgtagtggtgatggaac 44 |||||||| || ||||||||||||||||| Sbjct: 1096 tgtgatgtaccatgtagtggtgatggaac 1124
>gb|AC145925.2| Pan troglodytes BAC clone RP43-40L5 from 7, complete sequence Length = 156109 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gaatcctgttgaaaatgaagc 206 ||||||||||||||||||||| Sbjct: 27456 gaatcctgttgaaaatgaagc 27476
>emb|BX060553.1|CNS09IVX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC40DH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gcatagatgcagttgatgcag 469 ||||||||||||||||||||| Sbjct: 568 gcatagatgcagttgatgcag 548
>emb|BX033901.1|CNS08YBL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 716 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gcatagatgcagttgatgcag 469 ||||||||||||||||||||| Sbjct: 572 gcatagatgcagttgatgcag 552
>emb|BX033900.1|CNS08YBK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 721 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gcatagatgcagttgatgcag 469 ||||||||||||||||||||| Sbjct: 248 gcatagatgcagttgatgcag 268
>emb|BX018882.1|CNS08MQE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28CF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1022 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gcatagatgcagttgatgcag 469 ||||||||||||||||||||| Sbjct: 556 gcatagatgcagttgatgcag 536
>emb|BX012875.1|CNS08I3J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2BE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 636 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gcatagatgcagttgatgcag 469 ||||||||||||||||||||| Sbjct: 558 gcatagatgcagttgatgcag 538
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 cttgatgtttctaatgagctacctg 277 ||||||| ||||||||||||||||| Sbjct: 2311823 cttgatgattctaatgagctacctg 2311799
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 cttgatgtttctaatgagctacctg 277 ||||||| ||||||||||||||||| Sbjct: 47900 cttgatgattctaatgagctacctg 47876
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 cttgatgtttctaatgagctacctg 277 ||||||| ||||||||||||||||| Sbjct: 98772 cttgatgattctaatgagctacctg 98748
>ref|XM_475401.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4260 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 ttgatgtttctaatgagctacctg 277 |||||| ||||||||||||||||| Sbjct: 2588 ttgatgattctaatgagctacctg 2611
>gb|AF074613.1| Escherichia coli O157:H7 plasmid pO157, complete sequence Length = 92077 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 12589 agtggtgatggaactgtccg 12608
>gb|AC025721.3| Caenorhabditis elegans cosmid Y48G8AL, complete sequence Length = 126020 Score = 40.1 bits (20), Expect = 7.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttg 214 |||||||| || || |||||||||||||| |||| |||||||||| |||| Sbjct: 66353 atggtctattcgacgtgctcaatgaatccgattgaggatgaagctgtagttg 66404
>gb|AC140931.5| Mus musculus BAC clone RP23-3L22 from chromosome 15, complete sequence Length = 202576 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 agggaaaacaagaaacgaaa 516 |||||||||||||||||||| Sbjct: 157938 agggaaaacaagaaacgaaa 157957
>gb|AF399919.3| Escherichia coli 0113:H21 large virulence plasmid pO113 fimbrial biosynthesis operon, complete sequence Length = 36851 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 781 agtggtgatggaactgtccg 762
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 ttgatgtttctaatgagctacctg 277 |||||| ||||||||||||||||| Sbjct: 111944 ttgatgattctaatgagctacctg 111921
>gb|BC068818.1| Xenopus laevis hypothetical protein LOC414460, mRNA (cDNA clone IMAGE:6635510), partial cds Length = 2221 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 175 acatgctcaatgaatcctgttgaaaatgaagctgtt 210 |||||||| |||||||||||||| |||| |||||| Sbjct: 1032 acatgctctttgaatcctgttgaagatgaggctgtt 1067
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 ttgatgtttctaatgagctacctg 277 |||||| ||||||||||||||||| Sbjct: 1198 ttgatgattctaatgagctacctg 1175
>gb|AY258503.2| Escherichia coli strain EH41 plasmid pO113, complete sequence Length = 165548 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 138060 agtggtgatggaactgtccg 138041
>emb|AJ864967.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97362 Length = 1120 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864966.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97348 Length = 1138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864965.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97254 Length = 1138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864964.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97225 Length = 1079 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864963.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97207 Length = 1135 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 277 gaaacgaaaatagcaattga 296
>emb|AJ864962.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97205 Length = 1138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864961.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97193 Length = 1132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 274 gaaacgaaaatagcaattga 293
>emb|AJ864960.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V97176 Length = 1129 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 271 gaaacgaaaatagcaattga 290
>emb|AJ864959.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V96708 Length = 1079 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>emb|AJ864958.1| Plasmodium vivax partial msp3a gene for merozoite surface protein 3 alpha, isolate V96700 Length = 1078 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 280 gaaacgaaaatagcaattga 299
>gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosome 18, complete sequence Length = 198519 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tactgtgtgatgtgccctgt 30 |||||||||||||||||||| Sbjct: 129345 tactgtgtgatgtgccctgt 129364
>gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosome 6, complete sequence Length = 177662 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 atgagctacctgaattgatc 285 |||||||||||||||||||| Sbjct: 69225 atgagctacctgaattgatc 69206
>emb|AL355677.15| Human DNA sequence from clone RP11-428M15 on chromosome 13 Contains a CpG island, complete sequence Length = 175302 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 ggcgggtggcagtgttgaggtcag 449 ||||||||| |||||||||||||| Sbjct: 96219 ggcgggtggaagtgttgaggtcag 96196
>emb|AL158033.18| Human DNA sequence from clone RP3-336G18 on chromosome 6, complete sequence Length = 102282 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 gaaaacaagaaacgaaaata 519 |||||||||||||||||||| Sbjct: 59095 gaaaacaagaaacgaaaata 59076
>emb|Z35785.1|SCYBL024W S.cerevisiae chromosome II reading frame ORF YBL024w Length = 3007 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 187 aatcctgttgaaaatgaagctgttgttg 214 |||||| ||||||||||||| ||||||| Sbjct: 1555 aatcctattgaaaatgaagcggttgttg 1582
>emb|X97542.1|ECDNAPLAS E.coli 8.6 kb DNA from plasmid p0157 Length = 8590 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 3918 agtggtgatggaactgtccg 3937
>emb|X77291.1|SCIILDNA S.cerevisiae YBL0421, YBL0438, YBL0418, YBL0422, YBL0423, YBL0426, YBL0425, YBL0424, and YBL0437 genes Length = 18100 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 aatcctgttgaaaatgaagctgttgttg 214 |||||| ||||||||||||| ||||||| Sbjct: 4376 aatcctattgaaaatgaagcggttgttg 4349
>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tggagaacatggaatattgg 86 |||||||||||||||||||| Sbjct: 155900 tggagaacatggaatattgg 155919
>emb|X53032.1|BABHIPM Bacillus BamHI proviral methylase gene for BamHI proviral methylase Length = 1459 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ttgaaaatgaagctgttgttggtg 217 |||||||||| ||||||||||||| Sbjct: 176 ttgaaaatgacgctgttgttggtg 199
>ref|NM_001015962.2| Xenopus tropicalis NOL1/NOP2/Sun domain family, member 2 (nsun2), mRNA Length = 2901 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgtt 210 |||||||| || || ||||| |||||||||||||| |||| |||||| Sbjct: 1079 atggtctattctacgtgctctttgaatcctgttgaagatgaggctgtt 1126
>emb|AJ007716.1|ECO007716 Escherichia coli plasmid pO157, espP natural mutant with inserted IS1203 Length = 9904 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 5232 agtggtgatggaactgtccg 5251
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cttgatgtttctaatgagct 272 |||||||||||||||||||| Sbjct: 68015 cttgatgtttctaatgagct 68034
>gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, complete sequence Length = 139770 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tggagaacatggaatattgg 86 |||||||||||||||||||| Sbjct: 32564 tggagaacatggaatattgg 32545
>gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone BACR06C11, complete sequence Length = 174500 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgaaaatgaagctgttgttg 214 |||||||||||||||||||| Sbjct: 121359 tgaaaatgaagctgttgttg 121340
>dbj|AK032928.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720474C16 product:unclassifiable, full insert sequence Length = 2434 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 atgagctacctgaattgatc 285 |||||||||||||||||||| Sbjct: 237 atgagctacctgaattgatc 218
>gb|BC097814.1| Xenopus laevis hypothetical protein LOC414460, mRNA (cDNA clone MGC:115532 IMAGE:3377167), complete cds Length = 2496 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 175 acatgctcaatgaatcctgttgaaaatgaagctgtt 210 |||||||| |||||||||||||| |||| |||||| Sbjct: 1024 acatgctctttgaatcctgttgaagatgaggctgtt 1059
>gb|AC073524.13|AC073524 Homo sapiens X BAC RP11-637N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 58198 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgttgaaaatgaagctgtt 210 |||||||||||||||||||| Sbjct: 9226 ctgttgaaaatgaagctgtt 9245
>ref|NM_001028383.1| Caenorhabditis elegans Y67A10A.10 (Y67A10A.10) mRNA, complete cds Length = 571 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gtggggattctgttgaactc 252 |||||||||||||||||||| Sbjct: 121 gtggggattctgttgaactc 102
>ref|NM_058429.3| Caenorhabditis elegans Y48G8AL.5 (Y48G8AL.5) mRNA, complete cds Length = 1960 Score = 40.1 bits (20), Expect = 7.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgttgttg 214 |||||||| || || |||||||||||||| |||| |||||||||| |||| Sbjct: 953 atggtctattcgacgtgctcaatgaatccgattgaggatgaagctgtagttg 1004
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 ttgatgtttctaatgagctacctg 277 |||||| ||||||||||||||||| Sbjct: 22802494 ttgatgattctaatgagctacctg 22802471
>gb|AC007500.7| Homo sapiens chromosome 16 clone RP11-545E2, complete sequence Length = 220562 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tcactacaggaagaatgtga 376 |||||||||||||||||||| Sbjct: 97008 tcactacaggaagaatgtga 96989
>gb|AF491947.1| Plasmodium vivax isolate IEC-Brazil 69 merozoite surface protein 3 alpha gene, partial cds Length = 1659 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaaacgaaaatagcaattga 527 |||||||||||||||||||| Sbjct: 397 gaaacgaaaatagcaattga 416
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cagttgatgcagatatgaat 477 |||||||||||||||||||| Sbjct: 1386736 cagttgatgcagatatgaat 1386755
>emb|Y13614.1|ECY13614 Escherichia coli pssA gene Length = 10620 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 3759 agtggtgatggaactgtccg 3778
>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tggagaacatggaatattgg 86 |||||||||||||||||||| Sbjct: 158860 tggagaacatggaatattgg 158879
>gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65 of 83 of the complete sequence Length = 251192 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgaaaatgaagctgttgttg 214 |||||||||||||||||||| Sbjct: 151856 tgaaaatgaagctgttgttg 151837
>emb|CR848434.2| Xenopus tropicalis finished cDNA, clone TEgg048n02 Length = 2901 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 163 atggtctactcaacatgctcaatgaatcctgttgaaaatgaagctgtt 210 |||||||| || || ||||| |||||||||||||| |||| |||||| Sbjct: 1079 atggtctattctacgtgctctttgaatcctgttgaagatgaggctgtt 1126
>emb|BX927414.24| Zebrafish DNA sequence from clone DKEYP-5A5 in linkage group 10, complete sequence Length = 126112 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gttgaaaatgaagctgttgt 212 |||||||||||||||||||| Sbjct: 87961 gttgaaaatgaagctgttgt 87980
>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete sequence Length = 215389 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tgatgcagatatgaatgagt 481 |||||||||||||||||||| Sbjct: 144502 tgatgcagatatgaatgagt 144521
>emb|AL929066.7| Mouse DNA sequence from clone RP23-68E1 on chromosome 2, complete sequence Length = 210907 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tgaggtcagcatagatgcag 460 |||||||||||||||||||| Sbjct: 83959 tgaggtcagcatagatgcag 83940
>dbj|AB011549.2| Escherichia coli plasmid pO157 DNA, complete sequence Length = 92721 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agtggtgatggaactgtccg 50 |||||||||||||||||||| Sbjct: 82104 agtggtgatggaactgtccg 82123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,593,369 Number of Sequences: 3902068 Number of extensions: 4593369 Number of successful extensions: 80538 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80275 Number of HSP's gapped (non-prelim): 254 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)