ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42f12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 385 bits (194), Expect = e-103 Identities = 308/346 (89%) Strand = Plus / Plus Query: 232 tcgtcaggaacgggaacgagtggacggcggcggcgcacgtgatcacggcggtgatcgggt 291 ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 tcgtcagaagcgggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggt 139 Query: 292 ccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggccggaccgggca 351 |||| ||||||||||||||||||||| ||||||||||||||||| |||| || ||||| | Sbjct: 140 ccggggtgctgtcgctggcgtggagcgtggcgcagctggggtggctggcggggccgggga 199 Query: 352 tgatggtggtgttcgcctcggtgacggcgctgcagtccaccatcttcgccgactgctacc 411 ||||| | |||||||| | ||||||||||||||||| | | |||||||||||||||| Sbjct: 200 tgatgctcgtgttcgcggccgtgacggcgctgcagtcggcgctgttcgccgactgctacc 259 Query: 412 ggtcgccggacccggagcacggcccgcaccgcaaccgcacctacgcccacgccgtcgagc 471 | ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 260 gctcgccggacccggaggtcggcccgcaccgcaaccgcacctacgccaacgccgtcgagc 319 Query: 472 gcaacttaggtagcagcagtgcgtgggtctgccaattgttgcagcaaacagccttgttcg 531 ||||| |||||||| || |||||||||||| ||| |||||||||| |||||||||| Sbjct: 320 gcaacctaggtagctcgagcgcgtgggtctgcttgttgctgcagcaaacggccttgttcg 379 Query: 532 gctacggcattgcctacaccatcaccgcttccatcagcttcagggc 577 |||||||||| ||||||||||||||||| |||||||| | |||||| Sbjct: 380 gctacggcatcgcctacaccatcaccgcctccatcagttgcagggc 425
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 385 bits (194), Expect = e-103 Identities = 308/346 (89%) Strand = Plus / Plus Query: 232 tcgtcaggaacgggaacgagtggacggcggcggcgcacgtgatcacggcggtgatcgggt 291 ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tcgtcagaagcgggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggt 247 Query: 292 ccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggccggaccgggca 351 |||| ||||||||||||||||||||| ||||||||||||||||| |||| || ||||| | Sbjct: 248 ccggggtgctgtcgctggcgtggagcgtggcgcagctggggtggctggcggggccgggga 307 Query: 352 tgatggtggtgttcgcctcggtgacggcgctgcagtccaccatcttcgccgactgctacc 411 ||||| | |||||||| | ||||||||||||||||| | | |||||||||||||||| Sbjct: 308 tgatgctcgtgttcgcggccgtgacggcgctgcagtcggcgctgttcgccgactgctacc 367 Query: 412 ggtcgccggacccggagcacggcccgcaccgcaaccgcacctacgcccacgccgtcgagc 471 | ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 368 gctcgccggacccggaggtcggcccgcaccgcaaccgcacctacgccaacgccgtcgagc 427 Query: 472 gcaacttaggtagcagcagtgcgtgggtctgccaattgttgcagcaaacagccttgttcg 531 ||||| |||||||| || |||||||||||| ||| |||||||||| |||||||||| Sbjct: 428 gcaacctaggtagctcgagcgcgtgggtctgcttgttgctgcagcaaacggccttgttcg 487 Query: 532 gctacggcattgcctacaccatcaccgcttccatcagcttcagggc 577 |||||||||| ||||||||||||||||| |||||||| | |||||| Sbjct: 488 gctacggcatcgcctacaccatcaccgcctccatcagttgcagggc 533
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 299 bits (151), Expect = 5e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23497989 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctgtcgctg 23497930 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgggcatgatggtggtgttcgcc 368 ||||||||| ||||||||||||||||| |||| || ||||| |||||| | |||||||| Sbjct: 23497929 gcgtggagcgtggcgcagctggggtggctggcggggccggggatgatgctcgtgttcgcg 23497870 Query: 369 tcggtgacggcgctgcagtccaccatcttcgccgactgctaccggtcgccggacccggag 428 | ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 23497869 gccgtgacggcgctgcagtcggcgctgttcgccgactgctaccgctcgccggacccggag 23497810 Query: 429 cacggcccgcaccgcaaccgcacctacgcccacgccgtcgagcgcaacttaggta 483 |||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 23497809 gtcggcccgcaccgcaaccgcacctacgccaacgccgtcgagcgcaacctaggta 23497755 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 24509805 gtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggc 24509864 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || | ||||||||||||||||||||||| Sbjct: 24509865 gtggggcgtcgcgcagctggggtgggtggccgg 24509897 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 263 ggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggc 322 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 23490507 ggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcgtggagcgtggc 23490448 Query: 323 gcagctggggtgggtggccggaccgg 348 | ||||||||||||||| ||||||| Sbjct: 23490447 gaagctggggtgggtggggggaccgg 23490422 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 492 gcgtgggtctgccaattgttgcagcaaacagccttgttcggctacggcattgcctacacc 551 |||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 23495362 gcgtgggtctgcttgttgctgcagcaaacggccttgttcggctacggcatcgcctacacc 23495303 Query: 552 atcaccgcttccatcag 568 |||||||| |||||||| Sbjct: 23495302 atcaccgcctccatcag 23495286 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| ||||||||||||| |||||||||| ||||| |||||||| | ||| Sbjct: 33695966 gcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcg 33696025 Query: 324 cagctggggtgggtggccgg 343 ||||| || ||||||||||| Sbjct: 33696026 cagctcggctgggtggccgg 33696045
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 299 bits (151), Expect = 5e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53892 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctgtcgctg 53833 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgggcatgatggtggtgttcgcc 368 ||||||||| ||||||||||||||||| |||| || ||||| |||||| | |||||||| Sbjct: 53832 gcgtggagcgtggcgcagctggggtggctggcggggccggggatgatgctcgtgttcgcg 53773 Query: 369 tcggtgacggcgctgcagtccaccatcttcgccgactgctaccggtcgccggacccggag 428 | ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 53772 gccgtgacggcgctgcagtcggcgctgttcgccgactgctaccgctcgccggacccggag 53713 Query: 429 cacggcccgcaccgcaaccgcacctacgcccacgccgtcgagcgcaacttaggta 483 |||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 53712 gtcggcccgcaccgcaaccgcacctacgccaacgccgtcgagcgcaacctaggta 53658 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 263 ggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggc 322 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 46410 ggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcgtggagcgtggc 46351 Query: 323 gcagctggggtgggtggccggaccgg 348 | ||||||||||||||| ||||||| Sbjct: 46350 gaagctggggtgggtggggggaccgg 46325 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 492 gcgtgggtctgccaattgttgcagcaaacagccttgttcggctacggcattgcctacacc 551 |||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 51265 gcgtgggtctgcttgttgctgcagcaaacggccttgttcggctacggcatcgcctacacc 51206 Query: 552 atcaccgcttccatcag 568 |||||||| |||||||| Sbjct: 51205 atcaccgcctccatcag 51189
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 20864116 gtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgctgtcgctggc 20864175 Query: 311 gtggagcatggcgcagctggggtgggtggc 340 |||| ||||||||||||||||||||||| Sbjct: 20864176 gtgggcgatggcgcagctggggtgggtggc 20864205 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 |||||||||||| |||||| | ||||||||||| |||| |||||||||||||||||| Sbjct: 6695478 gagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctg 6695419 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgg 348 || ||| || ||||||||| || ||||| ||||| |||| Sbjct: 6695418 gcatggtccacggcgcagctcggctgggtcgccggcccgg 6695379 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgct 301 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 20841862 gcgcacatcatcacggcggtgatcggctccggcgtgct 20841899 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 526 tgttcggctacggcattgcctacaccatcaccgcttccatc 566 |||||||| |||||| | ||||||||||||||| |||||| Sbjct: 20864388 tgttcggcaccggcatcggctacaccatcaccgcctccatc 20864428 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 283 tgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggccg 342 ||||||||||| |||| ||| || ||||||||| | | || ||||| |||||||| |||| Sbjct: 6705658 tgatcgggtccagcgtcctggcggtggcgtggaccttcgcccagctcgggtgggtcgccg 6705599 Query: 343 g 343 | Sbjct: 6705598 g 6705598
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 118791 gtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgctgtcgctggc 118850 Query: 311 gtggagcatggcgcagctggggtgggtggc 340 |||| ||||||||||||||||||||||| Sbjct: 118851 gtgggcgatggcgcagctggggtgggtggc 118880 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgct 301 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 96537 gcgcacatcatcacggcggtgatcggctccggcgtgct 96574 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 526 tgttcggctacggcattgcctacaccatcaccgcttccatc 566 |||||||| |||||| | ||||||||||||||| |||||| Sbjct: 119063 tgttcggcaccggcatcggctacaccatcaccgcctccatc 119103
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 108 gtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggc 167 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || | ||||||||||||||||||||||| Sbjct: 168 gtggggcgtcgcgcagctggggtgggtggccgg 200
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 69436 gtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggc 69495 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || | ||||||||||||||||||||||| Sbjct: 69496 gtggggcgtcgcgcagctggggtgggtggccgg 69528
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 103127 gtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggc 103186 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || | ||||||||||||||||||||||| Sbjct: 103187 gtggggcgtcgcgcagctggggtgggtggccgg 103219
>ref|NM_190137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | | |||||||||||||| |||||||||||| |||||||| Sbjct: 64 tggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcg 123 Query: 312 tggagcatggcgcagctggggtgggtggccgg 343 |||||| ||||||||||||| ||||||||||| Sbjct: 124 tggagcgtggcgcagctgggttgggtggccgg 155
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | | |||||||||||||| |||||||||||| |||||||| Sbjct: 38113361 tggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcg 38113302 Query: 312 tggagcatggcgcagctggggtgggtggccgg 343 |||||| ||||||||||||| ||||||||||| Sbjct: 38113301 tggagcgtggcgcagctgggttgggtggccgg 38113270 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 38305491 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 38305432 Query: 311 gtggagcatggcgcagctggggtgggtggccggaccgg 348 |||| ||| |||||||| || ||||||||||| |||| Sbjct: 38305431 gtgggccatcgcgcagctcggctgggtggccgggccgg 38305394 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 38128527 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 38128468 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 38128467 tggagcgtggcccagatggggtgggtg 38128441 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgccgccggccggccggg 126 |||||||||||||||||||| Sbjct: 23347931 ctcgccgccggccggccggg 23347950
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | | |||||||||||||| |||||||||||| |||||||| Sbjct: 81395 tggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcg 81336 Query: 312 tggagcatggcgcagctggggtgggtggccgg 343 |||||| ||||||||||||| ||||||||||| Sbjct: 81335 tggagcgtggcgcagctgggttgggtggccgg 81304 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 96561 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 96502 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 96501 tggagcgtggcccagatggggtgggtg 96475
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | | |||||||||||||| |||||||||||| |||||||| Sbjct: 32595 tggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcg 32536 Query: 312 tggagcatggcgcagctggggtgggtggccgg 343 |||||| ||||||||||||| ||||||||||| Sbjct: 32535 tggagcgtggcgcagctgggttgggtggccgg 32504 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 47761 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 47702 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 47701 tggagcgtggcccagatggggtgggtg 47675
>dbj|AK073884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073B17, full insert sequence Length = 1762 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | | |||||||||||||| |||||||||||| |||||||| Sbjct: 140 tggacggcgacggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcg 199 Query: 312 tggagcatggcgcagctggggtgggtggccgg 343 |||||| ||||||||||||| ||||||||||| Sbjct: 200 tggagcgtggcgcagctgggttgggtggccgg 231
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 51 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 110 Query: 312 tggagcatggcgcagctggggtgggt 337 |||||| |||||||||| || ||||| Sbjct: 111 tggagcgtggcgcagctcggctgggt 136
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 30011921 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 30011980 Query: 312 tggagcatggcgcagctggggtgggt 337 |||||| |||||||||| || ||||| Sbjct: 30011981 tggagcgtggcgcagctcggctgggt 30012006 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 ||||||||||||| ||||| | |||||||||||||||||||| || |||||||||||||| Sbjct: 120012 gtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggc 120071 Query: 311 gtggagcatggcgcagctggggtgggtgg 339 |||| || ||||||||||| ||||||| Sbjct: 120072 gtgggcgatcgcgcagctgggctgggtgg 120100 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 gacggcggcggcgcacgtgatcacggcgg 282 ||||||||||||||||||| ||| ||||| Sbjct: 1450460 gacggcggcggcgcacgtgttcatggcgg 1450488 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 31013028 cgctcgccgccggccggccg 31013047
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 112197 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 112256 Query: 312 tggagcatggcgcagctggggtgggt 337 |||||| |||||||||| || ||||| Sbjct: 112257 tggagcgtggcgcagctcggctgggt 112282
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| |||||||| | || |||||||||||||| ||||||||||||||||||||| Sbjct: 51 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 110 Query: 312 tggagcatggcgcagctggggtgggt 337 |||||| |||||||||| || ||||| Sbjct: 111 tggagcgtggcgcagctcggctgggt 136
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 ||||||||||||| ||||| | |||||||||||||||||||| || |||||||||||||| Sbjct: 327 gtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggc 386 Query: 311 gtggagcatggcgcagctggggtgggtgg 339 |||| || ||||||||||| ||||||| Sbjct: 387 gtgggcgatcgcgcagctgggctgggtgg 415
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 ||||||||||||| ||||| | |||||||||||||||||||| || |||||||||||||| Sbjct: 114621 gtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggc 114680 Query: 311 gtggagcatggcgcagctggggtgggtgg 339 |||| || ||||||||||| ||||||| Sbjct: 114681 gtgggcgatcgcgcagctgggctgggtgg 114709
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 ||||||||||||| ||||| | |||||||||||||||||||| || |||||||||||||| Sbjct: 69039 gtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggc 69098 Query: 311 gtggagcatggcgcagctggggtgggtgg 339 |||| || ||||||||||| ||||||| Sbjct: 69099 gtgggcgatcgcgcagctgggctgggtgg 69127
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 ||||||||||||| ||||| | |||||||||||||||||||| || |||||||||||||| Sbjct: 348 gtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggc 407 Query: 311 gtggagcatggcgcagctggggtgggtgg 339 |||| || ||||||||||| ||||||| Sbjct: 408 gtgggcgatcgcgcagctgggctgggtgg 436
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 135 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 194 Query: 311 gtggagcatggcgcagctggggtgggtggccggaccgg 348 |||| ||| |||||||| || ||||||||||| |||| Sbjct: 195 gtgggccatcgcgcagctcggctgggtggccgggccgg 232
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 66316 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 66257 Query: 311 gtggagcatggcgcagctggggtgggtggccggaccgg 348 |||| ||| |||||||| || ||||||||||| |||| Sbjct: 66256 gtgggccatcgcgcagctcggctgggtggccgggccgg 66219
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 295 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 354 Query: 311 gtggagcatggcgcagctggggtgggtggccggaccgg 348 |||| ||| |||||||| || ||||||||||| |||| Sbjct: 355 gtgggccatcgcgcagctcggctgggtggccgggccgg 392
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 57195 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 57254 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || ||||||||||| ||||||||||| Sbjct: 57255 gtgggcgatcgcgcagctgggttgggtggccgg 57287
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 61828 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggc 61769 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || |||||||| || ||||||||||| Sbjct: 61768 gtgggcgatcgcgcagctcggctgggtggccgg 61736
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| ||||||||||||| ||| Sbjct: 5410933 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410874 Query: 336 gtggc 340 ||||| Sbjct: 5410873 gtggc 5410869 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 277 cggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtggg 336 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 4880794 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 4880853 Query: 337 tgg 339 ||| Sbjct: 4880854 tgg 4880856 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 4145425 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4145366 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 4145365 cagctgggctgggtggccgg 4145346 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 4120156 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4120215 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 4120216 cagctgggctgggtggccgg 4120235 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || |||||||||||||| |||||||||||| ||||| | |||| Sbjct: 4893438 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcg 4893379 Query: 324 cagctggggtgggtggccggaccgggcatgatggtggtgttcg 366 ||||| |||||||| | ||| || | | ||||||||||||||| Sbjct: 4893378 cagctcgggtgggtcggcgggcccgccgtgatggtggtgttcg 4893336
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 4769846 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggc 4769905 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || |||||||| || ||||||||||| Sbjct: 4769906 gtgggcgatcgcgcagctcggctgggtggccgg 4769938 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggccggccgggaagggaagg 135 |||||||||||||||||||| Sbjct: 27677994 ggccggccgggaagggaagg 27678013 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcgccgccggccggccggga 127 |||||||||||||||||||| Sbjct: 23490226 tcgccgccggccggccggga 23490245
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 20635155 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 20635214 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || ||||||||||| ||||||||||| Sbjct: 20635215 gtgggcgatcgcgcagctgggttgggtggccgg 20635247 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| || ||||||||| ||| Sbjct: 744560 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 744617 Query: 336 gtggccgg 343 |||||||| Sbjct: 744618 gtggccgg 744625 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacggcggcggcgcacgtga 273 ||||||||||||||||||||| Sbjct: 11663174 ggacggcggcggcgcacgtga 11663194
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| ||||||||||||| ||| Sbjct: 82950 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 82891 Query: 336 gtggc 340 ||||| Sbjct: 82890 gtggc 82886
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 232 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggc 291 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || |||||||| || ||||||||||| Sbjct: 292 gtgggcgatcgcgcagctcggctgggtggccgg 324
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 219 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggc 278 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || |||||||| || ||||||||||| Sbjct: 279 gtgggcgatcgcgcagctcggctgggtggccgg 311
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 252 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggg 311 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || ||||||||||| ||||||||||| Sbjct: 312 gtgggcgatcgcgcagctgggttgggtggccgg 344
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 4788630 gtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggc 4788689 Query: 311 gtggagcatggcgcagctggggtgggtggccgg 343 |||| || |||||||| || ||||||||||| Sbjct: 4788690 gtgggcgatcgcgcagctcggctgggtggccgg 4788722 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggccggccgggaagggaagg 135 |||||||||||||||||||| Sbjct: 27701982 ggccggccgggaagggaagg 27702001 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcgccgccggccggccggga 127 |||||||||||||||||||| Sbjct: 23800162 tcgccgccggccggccggga 23800181
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| ||||||||||||| ||| Sbjct: 5410922 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410863 Query: 336 gtggc 340 ||||| Sbjct: 5410862 gtggc 5410858 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 277 cggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtggg 336 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 4880776 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 4880835 Query: 337 tgg 339 ||| Sbjct: 4880836 tgg 4880838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 4145412 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4145353 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 4145352 cagctgggctgggtggccgg 4145333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 4120143 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4120202 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 4120203 cagctgggctgggtggccgg 4120222 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || |||||||||||||| |||||||||||| ||||| | |||| Sbjct: 4893420 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcg 4893361 Query: 324 cagctggggtgggtggccggaccgggcatgatggtggtgttcg 366 ||||| |||||||| | ||| || | | ||||||||||||||| Sbjct: 4893360 cagctcgggtgggtcggcgggcccgccgtgatggtggtgttcg 4893318
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| ||||||||||||| ||| Sbjct: 54875 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 54934 Query: 336 gtggc 340 ||||| Sbjct: 54935 gtggc 54939
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 246 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 305 Query: 336 gtg 338 ||| Sbjct: 306 gtg 308
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 121 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 180 Query: 336 gtg 338 ||| Sbjct: 181 gtg 183
>gb|AY224447.1| Oryza sativa (japonica cultivar-group) isolate 23048 amino acid permease-like protein mRNA, partial cds Length = 915 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 52 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 111 Query: 336 gtg 338 ||| Sbjct: 112 gtg 114
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1826353 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 1826294 Query: 336 gtg 338 ||| Sbjct: 1826293 gtg 1826291
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 30932 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 30873 Query: 336 gtg 338 ||| Sbjct: 30872 gtg 30870
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 78572 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 78513 Query: 336 gtg 338 ||| Sbjct: 78512 gtg 78510
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 248 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 307 Query: 336 gtg 338 ||| Sbjct: 308 gtg 310
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 246 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 305 Query: 336 gtg 338 ||| Sbjct: 306 gtg 308
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| Sbjct: 120 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgg 179 Query: 336 gtg 338 ||| Sbjct: 180 gtg 182
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| ||||||||||||| |||||||||| ||||| |||||||| | ||| Sbjct: 94 gcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcg 153 Query: 324 cagctggggtgggtggccgg 343 ||||| || ||||||||||| Sbjct: 154 cagctcggctgggtggccgg 173
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| ||||||||||||| |||||||||| ||||| |||||||| | ||| Sbjct: 127026 gcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcg 127085 Query: 324 cagctggggtgggtggccgg 343 ||||| || ||||||||||| Sbjct: 127086 cagctcggctgggtggccgg 127105
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| ||||||||||||| |||||||||| ||||| |||||||| | ||| Sbjct: 46409 gcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcg 46468 Query: 324 cagctggggtgggtggccgg 343 ||||| || ||||||||||| Sbjct: 46469 cagctcggctgggtggccgg 46488
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| ||||||||||||| |||||||||| ||||| |||||||| | ||| Sbjct: 127144 gcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcgtggagcgtcgcg 127203 Query: 324 cagctggggtgggtggccgg 343 ||||| || ||||||||||| Sbjct: 127204 cagctcggctgggtggccgg 127223
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 268 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 327 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 328 tggagcgtggcccagatggggtgggtg 354
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 277 cggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtggg 336 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 57628 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 57569 Query: 337 tgg 339 ||| Sbjct: 57568 tgg 57566 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || |||||||||||||| |||||||||||| ||||| | |||| Sbjct: 44984 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcg 45043 Query: 324 cagctggggtgggtggccggaccgggcatgatggtggtgttcg 366 ||||| |||||||| | ||| || | | ||||||||||||||| Sbjct: 45044 cagctcgggtgggtcggcgggcccgccgtgatggtggtgttcg 45086
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 147 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 206 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 207 tggagcgtggcccagatggggtgggtg 233
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 86 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 145 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 146 tggagcgtggcccagatggggtgggtg 172
>dbj|AK069508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L23, full insert sequence Length = 1819 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 277 cggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtggg 336 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 181 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 240 Query: 337 tgg 339 ||| Sbjct: 241 tgg 243
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 252 tggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcg 311 ||||||||| || |||||| ||||| || ||||||||||| ||||||||| ||||| || Sbjct: 147 tggacggcgacgacgcacgccatcaccgccgtgatcgggtcaggcgtgctggcgctgccg 206 Query: 312 tggagcatggcgcagctggggtgggtg 338 |||||| |||| ||| ||||||||||| Sbjct: 207 tggagcgtggcccagatggggtgggtg 233
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 277 cggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtggg 336 |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 79165 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 79106 Query: 337 tgg 339 ||| Sbjct: 79105 tgg 79103 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || |||||||||||||| |||||||||||| ||||| | |||| Sbjct: 66521 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcg 66580 Query: 324 cagctggggtgggtggccggaccgggcatgatggtggtgttcg 366 ||||| |||||||| | ||| || | | ||||||||||||||| Sbjct: 66581 cagctcgggtgggtcggcgggcccgccgtgatggtggtgttcg 66623
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| || ||||||||| ||| Sbjct: 17002 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 17059 Query: 336 gtggccgg 343 |||||||| Sbjct: 17060 gtggccgg 17067
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/68 (89%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 276 acggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgg 335 |||||||||||||| |||||||||||| | |||||||||||| || ||||||||| ||| Sbjct: 89741 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 89798 Query: 336 gtggccgg 343 |||||||| Sbjct: 89799 gtggccgg 89806
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 |||||||||||| |||||| | ||||||||||| |||| |||||||||||||||||| Sbjct: 129604 gagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctg 129545 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgg 348 || ||| || ||||||||| || ||||| ||||| |||| Sbjct: 129544 gcatggtccacggcgcagctcggctgggtcgccggcccgg 129505 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 283 tgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggccg 342 ||||||||||| |||| ||| || ||||||||| | | || ||||| |||||||| |||| Sbjct: 139784 tgatcgggtccagcgtcctggcggtggcgtggaccttcgcccagctcgggtgggtcgccg 139725 Query: 343 g 343 | Sbjct: 139724 g 139724
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 |||||||||||| |||||| | ||||||||||| |||| |||||||||||||||||| Sbjct: 25157 gagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctg 25098 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgg 348 || ||| || ||||||||| || ||||| ||||| |||| Sbjct: 25097 gcatggtccacggcgcagctcggctgggtcgccggcccgg 25058 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 283 tgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggccg 342 ||||||||||| |||| ||| || ||||||||| | | || ||||| |||||||| |||| Sbjct: 35337 tgatcgggtccagcgtcctggcggtggcgtggaccttcgcccagctcgggtgggtcgccg 35278 Query: 343 g 343 | Sbjct: 35277 g 35277
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 249 gagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctg 308 |||||||||||| |||||| | ||||||||||| |||| |||||||||||||||||| Sbjct: 258 gagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctg 317 Query: 309 gcgtggagcatggcgcagctggggtgggtggccggaccgg 348 || ||| || ||||||||| || ||||| ||||| |||| Sbjct: 318 gcatggtccacggcgcagctcggctgggtcgccggcccgg 357
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 222 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 281 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 282 cagctgggctgggtggccgg 301
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 200 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 259 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 260 cagctgggctgggtggccgg 279
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 225 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 284 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 285 cagctgggctgggtggccgg 304
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 202 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 261 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 262 cagctgggctgggtggccgg 281
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 223 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 282 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 283 cagctgggctgggtggccgg 302
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 200 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 259 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 260 cagctgggctgggtggccgg 279
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 87821 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 87762 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 87761 cagctgggctgggtggccgg 87742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcg 323 |||||| | ||||| || || ||||| |||||||||||||||||||||||| || ||| Sbjct: 62552 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 62611 Query: 324 cagctggggtgggtggccgg 343 |||||||| ||||||||||| Sbjct: 62612 cagctgggctgggtggccgg 62631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 281 ggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggc 340 |||||| || |||||||||||| | || ||||||||| ||||||||||||| |||||||| Sbjct: 2456155 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456214 Query: 341 cgg 343 ||| Sbjct: 2456215 cgg 2456217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 472217 cgatggcgttcggcgaaggg 472198
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 281 ggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggc 340 |||||| || |||||||||||| | || ||||||||| ||||||||||||| |||||||| Sbjct: 2456265 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456324 Query: 341 cgg 343 ||| Sbjct: 2456325 cgg 2456327 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 472215 cgatggcgttcggcgaaggg 472196
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 281 ggtgatcgggtccggcgtgctgtcgctggcgtggagcatggcgcagctggggtgggtggc 340 |||||| || |||||||||||| | || ||||||||| ||||||||||||| |||||||| Sbjct: 28651 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 28710 Query: 341 cgg 343 ||| Sbjct: 28711 cgg 28713
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 251 gtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggcgtgctgtcgctggc 310 |||||||||| || |||||| ||||| || ||||| || |||||||||||| ||||| | Sbjct: 124 gtggacggcgacgacgcacgccatcaccgccgtgataggctccggcgtgctggcgctgcc 183 Query: 311 gtggagcatggcgcagctggggtgggt 337 |||||| |||||||| |||| ||||| Sbjct: 184 ctggagcgtggcgcagatgggctgggt 210
>dbj|AK071510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095G15, full insert sequence Length = 1150 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 302 gtcgctggcgtggagcatggcgcagctggggtgggtggc 340 ||||||||||||| ||||||||||||||||||||||| Sbjct: 1 gtcgctggcgtgggcgatggcgcagctggggtgggtggc 39 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 526 tgttcggctacggcattgcctacaccatcaccgcttccatc 566 |||||||| |||||| | ||||||||||||||| |||||| Sbjct: 222 tgttcggcaccggcatcggctacaccatcaccgcctccatc 262
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgct 301 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 241 gcgcacatcatcacggcggtgatcggctccggcgtgct 278
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 264 gcgcacgtgatcacggcggtgatcgggtccggcgtgct 301 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 238 gcgcacatcatcacggcggtgatcggctccggcgtgct 275
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 gcgctcgccgccggccggccgg 125 |||||||||||||||||||||| Sbjct: 1944395 gcgctcgccgccggccggccgg 1944416
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 gcgctcgccgccggccggccgg 125 |||||||||||||||||||||| Sbjct: 1486745 gcgctcgccgccggccggccgg 1486724
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 gcgctcgccgccggccggccgg 125 |||||||||||||||||||||| Sbjct: 1373833 gcgctcgccgccggccggccgg 1373812
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 ccgcgctcgccgccggccggcc 123 |||||||||||||||||||||| Sbjct: 3217410 ccgcgctcgccgccggccggcc 3217389
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 cggtgatcgggtccggcgtgctgtcg 305 |||| ||||||||||||||||||||| Sbjct: 1107731 cggttatcgggtccggcgtgctgtcg 1107706
>ref|NM_118634.2| Arabidopsis thaliana nucleic acid binding AT4G25020 mRNA, complete cds Length = 1342 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 accgcttccatcagcttcagg 575 ||||||||||||||||||||| Sbjct: 244 accgcttccatcagcttcagg 264
>ref|XM_463979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 gacggcggcggcgcacgtgatcacggcgg 282 ||||||||||||||||||| ||| ||||| Sbjct: 210 gacggcggcggcgcacgtgttcatggcgg 238
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gctcgccgccggccggccggg 126 ||||||||||||||||||||| Sbjct: 1151027 gctcgccgccggccggccggg 1151047
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacggcggcggcgcacgtga 273 ||||||||||||||||||||| Sbjct: 107609 ggacggcggcggcgcacgtga 107629
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 caacagctggtcgatccagcc 38 ||||||||||||||||||||| Sbjct: 1588814 caacagctggtcgatccagcc 1588794
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 tccgcgctcgccgccggccgg 121 ||||||||||||||||||||| Sbjct: 3354204 tccgcgctcgccgccggccgg 3354224
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 555 accgcttccatcagcttcagg 575 ||||||||||||||||||||| Sbjct: 136039 accgcttccatcagcttcagg 136019
>emb|AL035523.1|ATF13M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F13M23 (ESSAII project) Length = 99688 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 555 accgcttccatcagcttcagg 575 ||||||||||||||||||||| Sbjct: 54291 accgcttccatcagcttcagg 54271
>emb|BX828357.1|CNS0A3VI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZC10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1342 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 accgcttccatcagcttcagg 575 ||||||||||||||||||||| Sbjct: 244 accgcttccatcagcttcagg 264
>gb|AY085393.1| Arabidopsis thaliana clone 149683 mRNA, complete sequence Length = 1312 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 accgcttccatcagcttcagg 575 ||||||||||||||||||||| Sbjct: 226 accgcttccatcagcttcagg 246
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 gacggcggcggcgcacgtgatcacggcgg 282 ||||||||||||||||||| ||| ||||| Sbjct: 131732 gacggcggcggcgcacgtgttcatggcgg 131760
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 gacggcggcggcgcacgtgatcacggcgg 282 ||||||||||||||||||| ||| ||||| Sbjct: 13881 gacggcggcggcgcacgtgttcatggcgg 13909
>ref|XM_467717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 90 cgctcgccgccggccggccg 109
>ref|XM_506962.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.24 mRNA Length = 1954 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 163 cgctcgccgccggccggccg 182
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgccgccggccggccgggaa 128 |||||||||||||||||||| Sbjct: 2380280 cgccgccggccggccgggaa 2380261
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ggccggccgggaagggaagg 135 |||||||||||||||||||| Sbjct: 43979 ggccggccgggaagggaagg 43960
>gb|AY491210.1| Supella longipalpa isolate B05 28S ribosomal RNA gene, complete sequence Length = 2307 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cccttccgcgctcgccgccg 116 |||||||||||||||||||| Sbjct: 1763 cccttccgcgctcgccgccg 1744
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcgccgccggccggccggga 127 |||||||||||||||||||| Sbjct: 80912 tcgccgccggccggccggga 80931
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence Length = 187517 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 98995 tccgcgctcgccgccggccg 98976 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 89934 tccgcgctcgccgccggccg 89915 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 80774 tccgcgctcgccgccggccg 80755 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 71738 tccgcgctcgccgccggccg 71719 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 65309 tccgcgctcgccgccggccg 65290 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 55840 tccgcgctcgccgccggccg 55821 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 45966 tccgcgctcgccgccggccg 45947 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 35613 tccgcgctcgccgccggccg 35594 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 26779 tccgcgctcgccgccggccg 26760 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 20357 tccgcgctcgccgccggccg 20338 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 9981 tccgcgctcgccgccggccg 9962 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 2198 tccgcgctcgccgccggccg 2179
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcgccgccggccggccggga 127 |||||||||||||||||||| Sbjct: 105739 tcgccgccggccggccggga 105758
>emb|AJ868286.1| Methanotrophic alpha proteobacterium arc2 partial pmoA gene for particulate methane monooxygenase alpha subunit, isolate arc2 Length = 463 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtgatcacggcggtgatcgg 289 |||||||||||||||||||| Sbjct: 271 gtgatcacggcggtgatcgg 290
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cacggcccctctcatctctt 204 |||||||||||||||||||| Sbjct: 77454 cacggcccctctcatctctt 77435
>gb|AY125271.1| Supella longipalpa 28S ribosomal RNA gene, partial sequence Length = 2304 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cccttccgcgctcgccgccg 116 |||||||||||||||||||| Sbjct: 1785 cccttccgcgctcgccgccg 1766
>emb|AL445258.4| Human DNA sequence from clone RP11-269F10 on chromosome Xq27.1-27.3 Contains STSs and GSSs, complete sequence Length = 175483 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gggaagggaagggagcggga 143 |||||||||||||||||||| Sbjct: 88882 gggaagggaagggagcggga 88863
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gctcgccgccggccggccgggaagggaa 133 |||||||||||||||| || |||||||| Sbjct: 273478 gctcgccgccggccgggcgcgaagggaa 273505
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 ggcgctgcagtccaccatcttcgc 400 ||||||||||||||||||| |||| Sbjct: 2652920 ggcgctgcagtccaccatcatcgc 2652943
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcgctcgccgccggccggc 122 |||||||||||||||||||| Sbjct: 78536 cgcgctcgccgccggccggc 78517
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcgctcgccgccggccggc 122 |||||||||||||||||||| Sbjct: 342429 cgcgctcgccgccggccggc 342410
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgcgctcgccgccggccggc 122 |||||||||||||||||||| Sbjct: 139731 cgcgctcgccgccggccggc 139750
>emb|CR857569.1| Pongo pygmaeus mRNA; cDNA DKFZp468J236 (from clone DKFZp468J236) Length = 1915 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 catgatggtggtgttcgcct 369 |||||||||||||||||||| Sbjct: 1465 catgatggtggtgttcgcct 1446
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ccgcgctcgccgccggccggccgg 125 |||||||||||||||||| ||||| Sbjct: 693948 ccgcgctcgccgccggcctgccgg 693971
>emb|CR523565.1| Gallus gallus finished cDNA, clone ChEST870f13 Length = 1341 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 531 ggctacggcattgcctacaccatc 554 ||||||||||| |||||||||||| Sbjct: 600 ggctacggcatggcctacaccatc 623
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10) Length = 98944 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 20536 tccgcgctcgccgccggccg 20517 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 11475 tccgcgctcgccgccggccg 11456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tccgcgctcgccgccggccg 120 |||||||||||||||||||| Sbjct: 2315 tccgcgctcgccgccggccg 2296
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ccgcgctcgccgccggccggccgg 125 |||| ||||||||||||||||||| Sbjct: 30781 ccgccctcgccgccggccggccgg 30804
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cgccggccggccgggaaggg 131 |||||||||||||||||||| Sbjct: 3126715 cgccggccggccgggaaggg 3126696
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tggtggtgttcgcctcggtg 374 |||||||||||||||||||| Sbjct: 2204264 tggtggtgttcgcctcggtg 2204245
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 67984 cgctcgccgccggccggccg 68003
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 2252 cgctcgccgccggccggccg 2271
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ccgcgctcgccgccggccggccgg 125 ||||||||| |||||||||||||| Sbjct: 7768433 ccgcgctcgtcgccggccggccgg 7768456
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgccgccggccggccggg 126 |||||||||||||||||||| Sbjct: 73629 ctcgccgccggccggccggg 73648
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgccgccggccggccggg 126 |||||||||||||||||||| Sbjct: 134673 ctcgccgccggccggccggg 134692
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 226 cgatggcgttcggcgaaggg 245
>emb|AJ459046.1|MSP459046 Methylocystis sp. F10V2a partial pmoA gene for particulate methane monooxygenase protein A, strain F10V2a Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtgatcacggcggtgatcgg 289 |||||||||||||||||||| Sbjct: 271 gtgatcacggcggtgatcgg 290
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 224 cgatggcgttcggcgaaggg 243
>dbj|AK071144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B04, full insert sequence Length = 1946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 90 cgctcgccgccggccggccg 109
>dbj|AK068712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164G17, full insert sequence Length = 1954 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgctcgccgccggccggccg 124 |||||||||||||||||||| Sbjct: 163 cgctcgccgccggccggccg 182
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 ccaccatcttcgccgactgctacc 411 |||||||||||||||||| ||||| Sbjct: 3452793 ccaccatcttcgccgactactacc 3452816
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 231 cgatggcgttcggcgaaggg 250
>emb|CT574565.2| Pan troglodytes chromosome X clone CH251-78I22 map Xq28, complete sequence Length = 170088 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gggaagggaagggagcggga 143 |||||||||||||||||||| Sbjct: 149285 gggaagggaagggagcggga 149266
>gb|DQ229268.1| Phytophthora sojae elicitin-like protein SOL1D pseudogene, complete sequence Length = 737 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cgcctcggtgacggcgctgc 384 |||||||||||||||||||| Sbjct: 75 cgcctcggtgacggcgctgc 94
>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence Length = 197585 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gggaagggaagggagcggga 143 |||||||||||||||||||| Sbjct: 154950 gggaagggaagggagcggga 154969
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 ccaccatcttcgccgactgctacc 411 |||||||||||||||||| ||||| Sbjct: 4764852 ccaccatcttcgccgactactacc 4764875
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 ccgcgctcgccgccggccggccgg 125 ||||| |||||||||||||||||| Sbjct: 1841749 ccgcgatcgccgccggccggccgg 1841726
>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence Length = 228741 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gggaagggaagggagcggga 143 |||||||||||||||||||| Sbjct: 147852 gggaagggaagggagcggga 147871
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cacggcccctctcatctctt 204 |||||||||||||||||||| Sbjct: 219956 cacggcccctctcatctctt 219937
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgatggcgttcggcgaaggg 173 |||||||||||||||||||| Sbjct: 70677 cgatggcgttcggcgaaggg 70658 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,947,019 Number of Sequences: 3902068 Number of extensions: 3947019 Number of successful extensions: 139509 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133698 Number of HSP's gapped (non-prelim): 5804 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
