ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A08, full insert sequence Length = 1618 Score = 301 bits (152), Expect = 1e-78 Identities = 356/424 (83%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 262 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 321 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccaggagctggacgg 202 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 322 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccaggagctggacgg 381 Query: 203 gccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcgcgct 262 |||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 382 gccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccggggcgct 441 Query: 263 ggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctcttccaggccaagga 322 | || |||||||||||||||| || | ||| || ||||||||||||| ||| || Sbjct: 442 gatcacgtccatgctggcggcgccggacgacgaccggcggccgctcttcgccgccggcga 501 Query: 323 catcaacaagttttacctcgacaacgggcccaagatattcccacagaggagctggggatt 382 | ||| ||| || |||||||| |||||||||||||| ||||| ||| |||| || || Sbjct: 502 cctcaccaacttctacctcgagaacgggcccaagatcttcccgcagcggagggttgggtt 561 Query: 383 cctgaccccaatcgggaacctgttcggcgccgtgaacggtcccaagtacgacggcaagtt 442 | |||| ||| | | |||||| |||||| |||| || ||||||||||| ||| ||| Sbjct: 562 cttgacaccagtggcaaacctgatcggcgtggtgagggggcccaagtacgatggctcgtt 621 Query: 443 cctgcacgacaagatcaagagcctcacccacgacgtcaccatcgcccagaccgtcaccaa 502 | |||| ||||||||||||||||| || || ||||| |||||| | | || |||||||| Sbjct: 622 cttgcatgacaagatcaagagccttacgcatgacgttaccatctcaaacacggtcaccaa 681 Query: 503 catc 506 |||| Sbjct: 682 catc 685
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 264 bits (133), Expect = 3e-67 Identities = 244/281 (86%) Strand = Plus / Minus Query: 90 ccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccgcggcctc 149 |||||| ||||| ||||||||||| | || ||||||||||||||||||||||||||||| Sbjct: 43084 ccgtcgaaggggaagctcatcacgattctgagcatcgacggcggcggcatccgcggcctt 43025 Query: 150 atcccctccaccatcctcgcctgcctcgagtccaagctccaggagctggacgggccggac 209 ||||| | |||||| |||| | ||||||| |||||||||||||||||||||| || ||| Sbjct: 43024 atcccggcgaccatcatcgcatacctcgaggccaagctccaggagctggacggcccagac 42965 Query: 210 gcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcg 269 || |||||||| |||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 42964 gcacgcatcgccgactacttcgacgtgatcgccgggacgagcaccggcgccctgctcacg 42905 Query: 270 tccatgctggcggcccccggcgagaacaagcggccgctcttccaggccaaggacatcaac 329 |||||||||||||| |||| ||| ||||| |||||||| ||| ||||||||| ||| | Sbjct: 42904 tccatgctggcggcgcccgacgacaacaaccggccgctgttcgccgccaaggacctcacc 42845 Query: 330 aagttttacctcgacaacgggcccaagatattcccacagag 370 | || |||||||| ||||| ||||| || ||||||||||| Sbjct: 42844 accttctacctcgagaacggccccaaaatcttcccacagag 42804 Score = 212 bits (107), Expect = 9e-52 Identities = 227/267 (85%) Strand = Plus / Plus Query: 103 agctcatcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccacca 162 ||||||||||| | ||||||||||| |||||||||||||||||||||||||| | |||| Sbjct: 56154 agctcatcacgattctcagcatcgatggcggcggcatccgcggcctcatcccggcgacca 56213 Query: 163 tcctcgcctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcgg 222 || |||| ||||||| ||||||| |||||||||||||| || || || || || || | Sbjct: 56214 tcatcgcacacctcgaggccaagctgcaggagctggacggcccagatgctcggattgccg 56273 Query: 223 actacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcgg 282 ||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||||| Sbjct: 56274 actacttcgacgtgatcgccgggacgagcaccggcgccctgctcacgtcgatgctggcgg 56333 Query: 283 cccccggcgagaacaagcggccgctcttccaggccaaggacatcaacaagttttacctcg 342 | |||| ||| ||||| |||||||| ||| ||||||||| ||| || || ||||||| Sbjct: 56334 cgcccgacgacaacaaccggccgctgttctccgccaaggacctcaccaccttctacctcg 56393 Query: 343 acaacgggcccaagatattcccacaga 369 | ||||| ||||| || |||||||||| Sbjct: 56394 agaacggccccaaaattttcccacaga 56420 Score = 186 bits (94), Expect = 5e-44 Identities = 160/182 (87%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 72885 caggagctggacgggccggacgcacgcatcgccgactacttcgacgtgatcgccgggacg 72944 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 ||||||||||||||| | |||| ||||||||||| |||| |||||||| ||||||||| Sbjct: 72945 agcaccggcgcgctgctgacgtcgatgctggcggcgcccgacgagaacaggcggccgctg 73004 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 368 ||| ||||||||| ||| || || |||||||| ||||| ||||| || ||||||||| Sbjct: 73005 ttcgccgccaaggacctcaccaccttctacctcgagaacggccccaacatcttcccacag 73064 Query: 369 ag 370 || Sbjct: 73065 ag 73066 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 420 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtc 479 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 56887 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctcacccacgacgtc 56946 Query: 480 accatcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaa 539 | | || | || ||||||||||||||||| || | |||||| |||||| |||||| Sbjct: 56947 aaggtggcggacacggtcaccaacatcatcgtgccggcgttcgacgtcaagtacctgcag 57006 Query: 540 cccgtcatcttcaacacgtac 560 ||| |||||||| ||||||| Sbjct: 57007 cccatcatcttctccacgtac 57027 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Minus Query: 420 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtc 479 |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| Sbjct: 42659 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgacgtc 42600 Query: 480 accatcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaa 539 | | || | || ||||||||||||||||| || | |||||| |||||| |||||| Sbjct: 42599 aaggtggcggacacggtcaccaacatcatcgtgccggcgttcgacgtcaagtacctgcag 42540 Query: 540 cccgtcatcttcaacacgtac 560 ||| |||||||| ||||||| Sbjct: 42539 cccatcatcttctccacgtac 42519 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 90 ccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccgcggcctc 149 |||||||||||| ||||||||| || || |||||||| |||||||||||||| || ||| Sbjct: 72686 ccgtcgcaggggaggctcatcaccgttctgagcatcgatggcggcggcatccgggggctc 72745 Query: 150 atcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 ||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 72746 atccctgccaccatcatcacctgcctcgagaccaagctccagg 72788 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 420 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgt 478 |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| Sbjct: 73200 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgacgt 73258
>dbj|AK067827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120O20, full insert sequence Length = 2434 Score = 250 bits (126), Expect = 4e-63 Identities = 243/282 (86%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 120 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 179 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccaggagctggacgg 202 ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 180 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccaggagctgggcgg 239 Query: 203 gccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcgcgct 262 |||||| ||| | ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 240 gccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccggggcgct 299 Query: 263 ggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctcttccaggccaagga 322 | || |||| ||||||||||| || | ||| ||| || ||||||||| ||| | || Sbjct: 300 gatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctcttcgccgccgacga 359 Query: 323 catcaacaagttttacctcgacaacgggcccaagatattccc 364 | ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 360 cctcaccaagttctacctcgagaacgggcccaagatcttccc 401 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 |||||||| |||||| |||| |||||||||||||||||||||| |||||||| || ||| Sbjct: 460 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 519 Query: 483 atcgcccagaccgtcaccaacatcatcgt 511 || ||| | || |||||||||||| |||| Sbjct: 520 attgccgacacagtcaccaacatcgtcgt 548
>gb|AY105282.1| Zea mays PCO126203 mRNA sequence Length = 768 Score = 228 bits (115), Expect = 2e-56 Identities = 229/267 (85%) Strand = Plus / Plus Query: 103 agctcatcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccacca 162 ||||||||||| | || |||||||| |||||||||||||||||||| ||||| | |||| Sbjct: 173 agctcatcacgatcctgagcatcgatggcggcggcatccgcggccttatcccggcgacca 232 Query: 163 tcctcgcctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcgg 222 || | || | ||||||| |||||||||||||||||||||| |||||||| || ||||| | Sbjct: 233 tcattgcgtacctcgaggccaagctccaggagctggacggcccggacgctcggatcgccg 292 Query: 223 actacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcgg 282 |||||||||| ||||| |||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 293 actacttcgatgtgattgccgggacgagcaccggcgccctgctcgcgtcgatgctggcgg 352 Query: 283 cccccggcgagaacaagcggccgctcttccaggccaaggacatcaacaagttttacctcg 342 | || | ||||||||| |||||||| ||| ||||||||| ||| || ||| ||||||| Sbjct: 353 cgccggacgagaacaaccggccgctgttcgccgccaaggacctcaccacgttctacctcg 412 Query: 343 acaacgggcccaagatattcccacaga 369 | ||||| || ||||| |||||||||| Sbjct: 413 agaacggcccaaagatcttcccacaga 439 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtca 480 ||||||||||||||| ||||||||||||||||||||||||||| || ||||| |||| Sbjct: 657 cccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgaagtca 714
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 153 bits (77), Expect = 7e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 7315 caggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacg 7374 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||||||||||||||| || | ||| || |||||||||| Sbjct: 7375 agcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctc 7434 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 368 ||| ||| ||| ||| ||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 7435 ttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcag 7494 Query: 369 aggag 373 |||| Sbjct: 7495 cggag 7499 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 15642 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 15701 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||| ||||||||||| || | ||| ||| || |||||| Sbjct: 15702 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 15761 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 364 ||| ||| | ||| ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 15762 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 15817 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 6844 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 6903 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 |||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 6904 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccagg 6953 Score = 123 bits (62), Expect = 7e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 14224 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 14283 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 ||||||| |||| ||||||||||||||||||||||| |||||||||||| Sbjct: 14284 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 14333 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 |||||||| |||||| |||| |||||||||||||||||||||| |||||||| || ||| Sbjct: 20869 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 20928 Query: 483 atcgcccagaccgtcaccaacatcatcgt 511 || ||| | || |||||||||||| |||| Sbjct: 20929 attgccgacacagtcaccaacatcgtcgt 20957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 ||||||||||| ||| |||| |||| ||||||||||||||||| || || ||||| ||| Sbjct: 8585 cccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttacc 8644 Query: 483 atcgcccagaccgtcaccaacatc 506 ||| | | || |||||||||||| Sbjct: 8645 atctcaaacacggtcaccaacatc 8668
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 153 bits (77), Expect = 7e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 22991312 caggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacg 22991371 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||||||||||||||| || | ||| || |||||||||| Sbjct: 22991372 agcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctc 22991431 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 368 ||| ||| ||| ||| ||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 22991432 ttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcag 22991491 Query: 369 aggag 373 |||| Sbjct: 22991492 cggag 22991496 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 22999639 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 22999698 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||| ||||||||||| || | ||| ||| || |||||| Sbjct: 22999699 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 22999758 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 364 ||| ||| | ||| ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 22999759 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 22999814 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 22990841 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 22990900 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 |||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 22990901 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccagg 22990950 Score = 123 bits (62), Expect = 7e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 22998221 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 22998280 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 ||||||| |||| ||||||||||||||||||||||| |||||||||||| Sbjct: 22998281 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 22998330 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 |||||||| |||||| |||| |||||||||||||||||||||| |||||||| || ||| Sbjct: 23004866 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 23004925 Query: 483 atcgcccagaccgtcaccaacatcatcgt 511 || ||| | || |||||||||||| |||| Sbjct: 23004926 attgccgacacagtcaccaacatcgtcgt 23004954 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 ||||||||||| ||| |||| |||| ||||||||||||||||| || || ||||| ||| Sbjct: 22992582 cccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttacc 22992641 Query: 483 atcgcccagaccgtcaccaacatc 506 ||| | | || |||||||||||| Sbjct: 22992642 atctcaaacacggtcaccaacatc 22992665
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 153 bits (77), Expect = 7e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct: 23301222 caggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacg 23301281 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||||||||||||||| || | ||| || |||||||||| Sbjct: 23301282 agcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctc 23301341 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 368 ||| ||| ||| ||| ||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 23301342 ttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcag 23301401 Query: 369 aggag 373 |||| Sbjct: 23301402 cggag 23301406 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 23309549 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 23309608 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||| ||||||||||| || | ||| ||| || |||||| Sbjct: 23309609 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 23309668 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 364 ||| ||| | ||| ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 23309669 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 23309724 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 23300751 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 23300810 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 |||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 23300811 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccagg 23300860 Score = 123 bits (62), Expect = 7e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 23308131 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 23308190 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 ||||||| |||| ||||||||||||||||||||||| |||||||||||| Sbjct: 23308191 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 23308240 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 |||||||| |||||| |||| |||||||||||||||||||||| |||||||| || ||| Sbjct: 23314776 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 23314835 Query: 483 atcgcccagaccgtcaccaacatcatcgt 511 || ||| | || |||||||||||| |||| Sbjct: 23314836 attgccgacacagtcaccaacatcgtcgt 23314864 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 423 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 482 ||||||||||| ||| |||| |||| ||||||||||||||||| || || ||||| ||| Sbjct: 23302492 cccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttacc 23302551 Query: 483 atcgcccagaccgtcaccaacatc 506 ||| | | || |||||||||||| Sbjct: 23302552 atctcaaacacggtcaccaacatc 23302575
>dbj|AK109768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A03, full insert sequence Length = 1931 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 189 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 248 |||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 1611 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 1670 Query: 249 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 308 |||||||| |||||| || |||| ||||||||||| || | ||| ||| || |||||| Sbjct: 1671 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 1730 Query: 309 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 364 ||| ||| | ||| ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 1731 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 1786 Score = 123 bits (62), Expect = 7e-25 Identities = 98/110 (89%) Strand = Plus / Plus Query: 83 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 142 |||||| |||| |||||| ||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 195 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 254 Query: 143 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 192 ||||||| |||| ||||||||||||||||||||||| |||||||||||| Sbjct: 255 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 304
>ref|XM_482944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1701 Score = 137 bits (69), Expect = 4e-29 Identities = 135/157 (85%) Strand = Plus / Plus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 328 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 387 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 || |||||||| ||||| ||| |||| ||||| | |||||| | ||||| ||||||| Sbjct: 388 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 447 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 ||||||| |||||||||||||||||||||| |||||| Sbjct: 448 tcgacgtaatcgccgggacgagcaccggcgggctggt 484 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 |||||||| || || |||||||||||||||||||| |||| Sbjct: 703 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 742 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 aagtacgacggcaagttcctgcac 449 |||||||||||||||| ||||||| Sbjct: 633 aagtacgacggcaagtacctgcac 656
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 137 bits (69), Expect = 4e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 23497737 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 23497678 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 || |||||||| ||||| ||| |||| ||||| | |||||| | ||||| ||||||| Sbjct: 23497677 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 23497618 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 ||||||| |||||||||||||||||||||| |||||| Sbjct: 23497617 tcgacgtaatcgccgggacgagcaccggcgggctggt 23497581 Score = 113 bits (57), Expect = 6e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||| Sbjct: 23487026 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 23486967 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 | | ||| ||| || || |||||||||||||| || || || || |||| |||||| Sbjct: 23486966 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 23486907 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 |||||||||||||||||||||||||||||| |||||| Sbjct: 23486906 tcgacgtgatcgccgggacgagcaccggcgggctggt 23486870 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 112 cggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 ||||||| |||||||||||||||||| | ||||| ||||||| |||||||| || | Sbjct: 17656545 cggtgctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgt 17656604 Query: 172 gcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcg 231 ||| ||| ||||| ||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 17656605 tcctggaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcg 17656664 Query: 232 acgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcggcccccggcg 291 |||| ||||||||||||||||| |||| |||||| || ||||||| ||||| ||||||| Sbjct: 17656665 acgtcatcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcccggcg 17656724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 23486651 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 23486612 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 216 atcgcggactacttcgacgtgatcgccgggacgagcaccgg 256 ||||| |||||||||||||| ||||||| ||||||||||| Sbjct: 23541035 atcgctgactacttcgacgtcgtcgccggcacgagcaccgg 23540995 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 120 agcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 |||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 23541226 agcatcgacggcggcggcgtcagagggatcatcccggccaccatcctcgcct 23541175 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 |||||||| || || |||||||||||||||||||| |||| Sbjct: 23497251 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 23497212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccgggacgagcaccggcgcgc 261 ||||||||||||||||||||| Sbjct: 365508 ccgggacgagcaccggcgcgc 365488 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 aagtacgacggcaagttcctgcac 449 |||||||||||||||| ||||||| Sbjct: 23497321 aagtacgacggcaagtacctgcac 23497298
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 137 bits (69), Expect = 4e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 89152 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 89093 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 || |||||||| ||||| ||| |||| ||||| | |||||| | ||||| ||||||| Sbjct: 89092 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 89033 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 ||||||| |||||||||||||||||||||| |||||| Sbjct: 89032 tcgacgtaatcgccgggacgagcaccggcgggctggt 88996 Score = 113 bits (57), Expect = 6e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||| Sbjct: 78441 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 78382 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 | | ||| ||| || || |||||||||||||| || || || || |||| |||||| Sbjct: 78381 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 78322 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 |||||||||||||||||||||||||||||| |||||| Sbjct: 78321 tcgacgtgatcgccgggacgagcaccggcgggctggt 78285 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 78066 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 78027 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 |||||||| || || |||||||||||||||||||| |||| Sbjct: 88666 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 88627 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 aagtacgacggcaagttcctgcac 449 |||||||||||||||| ||||||| Sbjct: 88736 aagtacgacggcaagtacctgcac 88713
>dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B01, full insert sequence Length = 1701 Score = 137 bits (69), Expect = 4e-29 Identities = 135/157 (85%) Strand = Plus / Plus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 328 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 387 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 || |||||||| ||||| ||| |||| ||||| | |||||| | ||||| ||||||| Sbjct: 388 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 447 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 ||||||| |||||||||||||||||||||| |||||| Sbjct: 448 tcgacgtaatcgccgggacgagcaccggcgggctggt 484 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 |||||||| || || |||||||||||||||||||| |||| Sbjct: 703 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 742 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 aagtacgacggcaagttcctgcac 449 |||||||||||||||| ||||||| Sbjct: 633 aagtacgacggcaagtacctgcac 656
>ref|XM_470838.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1450 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 123 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 182 |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| || Sbjct: 124 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 183 Query: 183 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 242 | ||| ||||||||||| || || ||||||||| |||| || ||||||||| |||||| Sbjct: 184 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 243 Query: 243 gggacgagcaccggcg 258 ||||| |||||||||| Sbjct: 244 gggaccagcaccggcg 259
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 123 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 182 |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| || Sbjct: 15674992 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 15675051 Query: 183 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 242 | ||| ||||||||||| || || ||||||||| |||| || ||||||||| |||||| Sbjct: 15675052 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 15675111 Query: 243 gggacgagcaccggcg 258 ||||| |||||||||| Sbjct: 15675112 gggaccagcaccggcg 15675127 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 204 ccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcg 258 |||||||| ||| ||||||||||||||||| | ||||||| ||| || |||||| Sbjct: 8124240 ccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcg 8124294
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 123 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 182 |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| || Sbjct: 84946 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 85005 Query: 183 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 242 | ||| ||||||||||| || || ||||||||| |||| || ||||||||| |||||| Sbjct: 85006 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 85065 Query: 243 gggacgagcaccggcg 258 ||||| |||||||||| Sbjct: 85066 gggaccagcaccggcg 85081
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 123 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 182 |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| || Sbjct: 15669526 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 15669585 Query: 183 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 242 | ||| ||||||||||| || || ||||||||| |||| || ||||||||| |||||| Sbjct: 15669586 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 15669645 Query: 243 gggacgagcaccggcg 258 ||||| |||||||||| Sbjct: 15669646 gggaccagcaccggcg 15669661 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 204 ccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcg 258 |||||||| ||| ||||||||||||||||| | ||||||| ||| || |||||| Sbjct: 8122075 ccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcg 8122129
>dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J03, full insert sequence Length = 1526 Score = 119 bits (60), Expect = 1e-23 Identities = 117/136 (86%) Strand = Plus / Plus Query: 123 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 182 |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| || Sbjct: 197 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 256 Query: 183 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 242 | ||| ||||||||||| || || ||||||||| |||| || ||||||||| |||||| Sbjct: 257 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 316 Query: 243 gggacgagcaccggcg 258 ||||| |||||||||| Sbjct: 317 gggaccagcaccggcg 332
>ref|XM_482940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 113 bits (57), Expect = 6e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||| Sbjct: 266 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 325 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 | | ||| ||| || || |||||||||||||| || || || || |||| |||||| Sbjct: 326 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 385 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 |||||||||||||||||||||||||||||| |||||| Sbjct: 386 tcgacgtgatcgccgggacgagcaccggcgggctggt 422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 641 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 680
>dbj|AK101432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038K22, full insert sequence Length = 1629 Score = 113 bits (57), Expect = 6e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 109 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 168 |||| ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||| Sbjct: 266 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 325 Query: 169 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 228 | | ||| ||| || || |||||||||||||| || || || || |||| |||||| Sbjct: 326 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 385 Query: 229 tcgacgtgatcgccgggacgagcaccggcgcgctggt 265 |||||||||||||||||||||||||||||| |||||| Sbjct: 386 tcgacgtgatcgccgggacgagcaccggcgggctggt 422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 496 tcaccaacatcatcgtccccaccttcgacatcaagttcct 535 ||||||||||| ||||||| ||||||||||||||| |||| Sbjct: 641 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 680
>ref|XM_482084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 112 cggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 ||||||| |||||||||||||||||| | ||||| ||||||| |||||||| || | Sbjct: 170 cggtgctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgt 229 Query: 172 gcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcg 231 ||| ||| ||||| ||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 230 tcctggaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcg 289 Query: 232 acgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcggcccccggcg 291 |||| ||||||||||||||||| |||| |||||| || ||||||| ||||| ||||||| Sbjct: 290 acgtcatcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcccggcg 349
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 112 cggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 ||||||| |||||||||||||||||| | ||||| ||||||| |||||||| || | Sbjct: 133195 cggtgctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgt 133254 Query: 172 gcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcg 231 ||| ||| ||||| ||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 133255 tcctggaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcg 133314 Query: 232 acgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcggcccccggcg 291 |||| ||||||||||||||||| |||| |||||| || ||||||| ||||| ||||||| Sbjct: 133315 acgtcatcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcccggcg 133374
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Plus Query: 112 cggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 ||||||| |||||||||||||||||| | ||||| ||||||| |||||||| || | Sbjct: 41934 cggtgctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgt 41993 Query: 172 gcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcg 231 ||| ||| ||||| ||||||||||||||||||| ||| | | ||||||||||||| Sbjct: 41994 tcctggaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcg 42053 Query: 232 acgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcggcccccggcg 291 |||| ||||||||||||||||| |||| |||||| || ||||||| ||||| ||||||| Sbjct: 42054 acgtcatcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcccggcg 42113
>ref|XM_482956.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 120 agcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgag 179 |||||||||||||||||| || | || ||||||| ||||||||||||||| ||| ||| Sbjct: 73 agcatcgacggcggcggcgtcagagggatcatcccggccaccatcctcgccttccttgag 132 Query: 180 tccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatc 239 ||||||| | ||||| || ||||| || | ||||| |||||||||||||| || Sbjct: 133 aaagagctccaaaaactggatggtccggatgctaggatcgctgactacttcgacgtcgtc 192 Query: 240 gccgggacgagcaccgg 256 ||||| ||||||||||| Sbjct: 193 gccggcacgagcaccgg 209
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| ||||||| ||||| || ||| | | || |||||||||||| ||||||| Sbjct: 22405909 agctccagcagctggatgggccagaggcgaggctggccgactacttcgactacatcgccg 22405968 Query: 244 ggacgagcaccggcgcgctg 263 ||||||||||||||| |||| Sbjct: 22405969 ggacgagcaccggcgggctg 22405988 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctcatccc 154 ||||||||||||||||||||| ||| ||||||| Sbjct: 22451015 catcgacggcggcggcatccgaggcgtcatccc 22451047 Score = 48.1 bits (24), Expect = 0.031 Identities = 66/80 (82%) Strand = Plus / Minus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| |||||||||||| || ||| | | || |||||||||||| ||||||| Sbjct: 22361029 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 22360970 Query: 244 ggacgagcaccggcgcgctg 263 | ||||||||||||| |||| Sbjct: 22360969 gcacgagcaccggcgggctg 22360950 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 22405836 acggtgctgaccatcgatggcggcggcatccg 22405867 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 22361102 acggtgctgaccatcgatggcggcggcatccg 22361071
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| ||||||| ||||| || ||| | | || |||||||||||| ||||||| Sbjct: 22334254 agctccagcagctggatgggccagaggcgaggctggccgactacttcgactacatcgccg 22334313 Query: 244 ggacgagcaccggcgcgctg 263 ||||||||||||||| |||| Sbjct: 22334314 ggacgagcaccggcgggctg 22334333 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctcatccc 154 ||||||||||||||||||||| ||| ||||||| Sbjct: 22379360 catcgacggcggcggcatccgaggcgtcatccc 22379392 Score = 48.1 bits (24), Expect = 0.031 Identities = 66/80 (82%) Strand = Plus / Minus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| |||||||||||| || ||| | | || |||||||||||| ||||||| Sbjct: 22289374 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 22289315 Query: 244 ggacgagcaccggcgcgctg 263 | ||||||||||||| |||| Sbjct: 22289314 gcacgagcaccggcgggctg 22289295 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 22334181 acggtgctgaccatcgatggcggcggcatccg 22334212 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 22289447 acggtgctgaccatcgatggcggcggcatccg 22289416
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| ||||||| ||||| || ||| | | || |||||||||||| ||||||| Sbjct: 101625 agctccagcagctggatgggccagaggcgaggctggccgactacttcgactacatcgccg 101566 Query: 244 ggacgagcaccggcgcgctg 263 ||||||||||||||| |||| Sbjct: 101565 ggacgagcaccggcgggctg 101546 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 122 catcgacggcggcggcatccgcggcctcatccc 154 ||||||||||||||||||||| ||| ||||||| Sbjct: 56519 catcgacggcggcggcatccgaggcgtcatccc 56487 Score = 48.1 bits (24), Expect = 0.031 Identities = 66/80 (82%) Strand = Plus / Plus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| |||||||||||| || ||| | | || |||||||||||| ||||||| Sbjct: 146505 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 146564 Query: 244 ggacgagcaccggcgcgctg 263 | ||||||||||||| |||| Sbjct: 146565 gcacgagcaccggcgggctg 146584 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 146432 acggtgctgaccatcgatggcggcggcatccg 146463 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 101698 acggtgctgaccatcgatggcggcggcatccg 101667
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 216 atcgcggactacttcgacgtgatcgccgggacgagcaccgg 256 ||||| |||||||||||||| ||||||| ||||||||||| Sbjct: 20810 atcgctgactacttcgacgtcgtcgccggcacgagcaccgg 20770 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 120 agcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 171 |||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 21001 agcatcgacggcggcggcgtcagagggatcatcccggccaccatcctcgcct 20950
>dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D02, full insert sequence Length = 1522 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctcatccc 154 ||||||||||||||||||||| ||| ||||||| Sbjct: 152 catcgacggcggcggcatccgaggcgtcatccc 184
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 48.1 bits (24), Expect = 0.031 Identities = 66/80 (82%) Strand = Plus / Plus Query: 184 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 243 |||||||| |||||||||||| || ||| | | || |||||||||||| ||||||| Sbjct: 725 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 784 Query: 244 ggacgagcaccggcgcgctg 263 | ||||||||||||| |||| Sbjct: 785 gcacgagcaccggcgggctg 804 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 acggtgctcagcatcgacggcggcggcatccg 142 |||||||| | |||||| |||||||||||||| Sbjct: 652 acggtgctgaccatcgatggcggcggcatccg 683
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 204 ccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcg 258 |||||||| ||| ||||||||||||||||| | ||||||| ||| || |||||| Sbjct: 55670 ccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcg 55724
>ref|XM_479707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2236 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccgggacgagcaccggcgcgc 261 ||||||||||||||||||||| Sbjct: 325 ccgggacgagcaccggcgcgc 305
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 acgggccggacgcgcgcatcg 219 ||||||||||||||||||||| Sbjct: 1319525 acgggccggacgcgcgcatcg 1319505
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 acgggccggacgcgcgcatcg 219 ||||||||||||||||||||| Sbjct: 2142065 acgggccggacgcgcgcatcg 2142085
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 cgagcaccggcgcgctggtcgcgtccatg 275 |||||||||||||| ||||| |||||||| Sbjct: 4355762 cgagcaccggcgcggtggtctcgtccatg 4355790
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gtccaagctccaggagctgga 199 ||||||||||||||||||||| Sbjct: 106694 gtccaagctccaggagctgga 106674
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 caccggcgcgctggtcgcgtc 271 ||||||||||||||||||||| Sbjct: 186216 caccggcgcgctggtcgcgtc 186196
>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence Length = 210186 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 caggccaaggacatcaacaag 332 ||||||||||||||||||||| Sbjct: 119121 caggccaaggacatcaacaag 119141
>ref|NM_001017596.1| Danio rerio zgc:110298 (zgc:110298), mRNA Length = 1694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 cagaccgtcaccaacatcatc 509 ||||||||||||||||||||| Sbjct: 283 cagaccgtcaccaacatcatc 303
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cgcatcgcggactacttcgac 233 ||||||||||||||||||||| Sbjct: 1338728 cgcatcgcggactacttcgac 1338748
>gb|AF223364.1|AF223364 Myxococcus xanthus tRNA/rRNA methyltransferase-like protein gene, partial cds; protein phosphatase 1 (pph1) and mannose-1-phosphate-guanyltransferase-like protein genes, complete cds; and unknown gene Length = 2686 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 cggcggcggcatccgcggcct 148 ||||||||||||||||||||| Sbjct: 2305 cggcggcggcatccgcggcct 2285
>gb|BC092857.1| Danio rerio zgc:110298, mRNA (cDNA clone MGC:110298 IMAGE:7401077), complete cds Length = 1694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 cagaccgtcaccaacatcatc 509 ||||||||||||||||||||| Sbjct: 283 cagaccgtcaccaacatcatc 303
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 cgacggcggcggcatccgcgg 145 ||||||||||||||||||||| Sbjct: 95951 cgacggcggcggcatccgcgg 95931
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccgggacgagcaccggcgcgc 261 ||||||||||||||||||||| Sbjct: 75022 ccgggacgagcaccggcgcgc 75002
>dbj|AK119294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E03, full insert sequence Length = 2236 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccgggacgagcaccggcgcgc 261 ||||||||||||||||||||| Sbjct: 325 ccgggacgagcaccggcgcgc 305
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 ggactacttcgacgtgatcgc 241 ||||||||||||||||||||| Sbjct: 829450 ggactacttcgacgtgatcgc 829430
>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete sequence Length = 205515 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 caggccaaggacatcaacaag 332 ||||||||||||||||||||| Sbjct: 201402 caggccaaggacatcaacaag 201422
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aggccaaggacatcaacaag 332 |||||||||||||||||||| Sbjct: 111250 aggccaaggacatcaacaag 111231
>ref|XM_523938.1| PREDICTED: Pan troglodytes similar to mucosa associated lymphoid tissue lymphoma translocation protein 1 isoform b; MALT associated translocation; MALT-lymphoma associated translocation; paracaspase; caspase-like protein (LOC468549), mRNA Length = 3525 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 attcccacagaggagctggg 378 |||||||||||||||||||| Sbjct: 1314 attcccacagaggagctggg 1295
>gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosome 19, complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 caggccaaggacatcaacaa 331 |||||||||||||||||||| Sbjct: 84689 caggccaaggacatcaacaa 84670
>ref|XM_465581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1406 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctc 149 ||||| ||||||||||||| |||||||| Sbjct: 88 catcgtcggcggcggcatctgcggcctc 115
>ref|XM_526407.1| PREDICTED: Pan troglodytes similar to 5-HT3c1 serotonin receptor-like protein (LOC471023), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 169 gtcaccaacatcagcgtccccacc 192
>gb|AY232494.1| Anthurium andraeanum putative dihydroflavonol 4-reductase (DFR1) mRNA, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cccacgacgtcaccatcgcc 488 |||||||||||||||||||| Sbjct: 922 cccacgacgtcaccatcgcc 941
>gb|BC101183.2| Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E, mRNA (cDNA clone MGC:120035 IMAGE:40017962), complete cds Length = 1700 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 355 gtcaccaacatcagcgtccccacc 378
>gb|BC101185.2| Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E, mRNA (cDNA clone MGC:120037 IMAGE:40017964), complete cds Length = 1499 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 187 gtcaccaacatcagcgtccccacc 210
>ref|NM_182589.2| Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E (HTR3E), mRNA Length = 1927 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 408 gtcaccaacatcagcgtccccacc 431
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gcatcgacggcggcggcatc 140 |||||||||||||||||||| Sbjct: 463258 gcatcgacggcggcggcatc 463277
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 3310994 cgacggcaagttcctgcacg 3311013
>gb|AY349353.1| Homo sapiens 5-HT3c1 serotonin receptor-like protein mRNA, complete cds; alternatively spliced Length = 1371 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 214 gtcaccaacatcagcgtccccacc 237
>gb|AY349352.1| Homo sapiens 5-HT3c1 serotonin receptor-like protein mRNA, complete cds; alternatively spliced Length = 1326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 169 gtcaccaacatcagcgtccccacc 192
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 gcccagaccgtcaccaacatcatc 509 ||||||||||||||| |||||||| Sbjct: 4169581 gcccagaccgtcaccgacatcatc 4169558
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gactacttcgacgtgatcgc 241 |||||||||||||||||||| Sbjct: 2174156 gactacttcgacgtgatcgc 2174137
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 acggcggcggcatccgcggc 146 |||||||||||||||||||| Sbjct: 3210027 acggcggcggcatccgcggc 3210008
>gb|DQ421810.1| Anthurium andraeanum dihydroflavonol 4-reductase mRNA, complete cds Length = 1044 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cccacgacgtcaccatcgcc 488 |||||||||||||||||||| Sbjct: 764 cccacgacgtcaccatcgcc 783
>gb|BC101182.1| Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E, mRNA (cDNA clone MGC:120034 IMAGE:40017961), complete cds Length = 1700 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 355 gtcaccaacatcagcgtccccacc 378
>emb|BX005238.8| Zebrafish DNA sequence from clone DKEY-61P9 in linkage group 4 Contains three genes for a novel protein similar to vertebrate heat shock 70kDa protein 12A (Hspa12a), the gene for a novel protein similar to vertebrate guanylate nucleotide binding protein family, the gene for a novel protein containing a beta-ketoacyl synthase, N-terminal domain, six novel genes and five CpG islands, complete sequence Length = 166866 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tcgacatcaagttcctgcaa 539 |||||||||||||||||||| Sbjct: 102789 tcgacatcaagttcctgcaa 102808 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tcgacatcaagttcctgcaa 539 |||||||||||||||||||| Sbjct: 61294 tcgacatcaagttcctgcaa 61313
>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence Length = 161765 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 agtgggagggagctaagcta 41 |||||||||||||||||||| Sbjct: 3117 agtgggagggagctaagcta 3136
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 3529938 cgacggcaagttcctgcacg 3529957
>gb|AE011915.1| Xanthomonas axonopodis pv. citri str. 306, section 293 of 469 of the complete genome Length = 10202 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 9961 cgacggcaagttcctgcacg 9980
>gb|AE012370.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 278 of 460 of the complete genome Length = 13098 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 7291 cgacggcaagttcctgcacg 7310
>gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, complete sequence Length = 160392 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 agtgggagggagctaagcta 41 |||||||||||||||||||| Sbjct: 102907 agtgggagggagctaagcta 102926
>gb|AF326935.2|AF326935 Leishmania donovani isoleucine tRNA synthetase (IleRS) gene, complete cds Length = 3690 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 caagttcctgcacgacaaga 456 |||||||||||||||||||| Sbjct: 3101 caagttcctgcacgacaaga 3120
>ref|NM_027208.1| Mus musculus 3-hydroxybutyrate dehydrogenase, type 2 (Bdh2), mRNA Length = 1051 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cgagtccaagctccaggagctgga 199 ||||||||| |||||||||||||| Sbjct: 213 cgagtccaaactccaggagctgga 236
>gb|BC021461.1| Mus musculus 3-hydroxybutyrate dehydrogenase, type 2, mRNA (cDNA clone IMAGE:5054795), containing frame-shift errors Length = 1191 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cgagtccaagctccaggagctgga 199 ||||||||| |||||||||||||| Sbjct: 351 cgagtccaaactccaggagctgga 374
>gb|BC036998.1| Mus musculus 3-hydroxybutyrate dehydrogenase, type 2, mRNA (cDNA clone MGC:46989 IMAGE:5041996), complete cds Length = 1051 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cgagtccaagctccaggagctgga 199 ||||||||| |||||||||||||| Sbjct: 213 cgagtccaaactccaggagctgga 236
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ggagctggacgggccggacg 210 |||||||||||||||||||| Sbjct: 92821 ggagctggacgggccggacg 92840
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 1842853 cgacggcaagttcctgcacg 1842834
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 acggcggcggcatccgcggc 146 |||||||||||||||||||| Sbjct: 2960121 acggcggcggcatccgcggc 2960140
>gb|DQ364060.1| Anthurium andraeanum dihydroflavonol 4-reductase (DFR) gene, complete cds Length = 1847 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cccacgacgtcaccatcgcc 488 |||||||||||||||||||| Sbjct: 1416 cccacgacgtcaccatcgcc 1435
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctc 149 ||||| ||||||||||||| |||||||| Sbjct: 16101905 catcgtcggcggcggcatctgcggcctc 16101932
>dbj|AB193037.1| Corynebacterium glutamicum DNA, strain specific island 10, strain: R Length = 14615 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cacccacgacgtcaccatcg 486 |||||||||||||||||||| Sbjct: 915 cacccacgacgtcaccatcg 934
>gb|AC131235.4| Homo sapiens 3 BAC RP11-778D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 111221 gtcaccaacatcagcgtccccacc 111198
>dbj|AK208132.1| Mus musculus cDNA, clone:Y2G0110D15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029817, based on BLAT search Length = 250 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cgagtccaagctccaggagctgga 199 ||||||||| |||||||||||||| Sbjct: 52 cgagtccaaactccaggagctgga 75
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctc 149 ||||| ||||||||||||| |||||||| Sbjct: 100139 catcgtcggcggcggcatctgcggcctc 100166
>dbj|AK110913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-C04, full insert sequence Length = 1408 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 catcgacggcggcggcatccgcggcctc 149 ||||| ||||||||||||| |||||||| Sbjct: 88 catcgtcggcggcggcatctgcggcctc 115
>ref|NM_209921.1| Eremothecium gossypii AEL292Wp (AEL292W), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ggagctggacgggccggacg 210 |||||||||||||||||||| Sbjct: 462 ggagctggacgggccggacg 481
>emb|AL935186.22| Zebrafish DNA sequence from clone CH211-250M6 in linkage group 4, complete sequence Length = 166476 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tcgacatcaagttcctgcaa 539 |||||||||||||||||||| Sbjct: 43805 tcgacatcaagttcctgcaa 43824
>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete sequence Length = 180316 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 agtgggagggagctaagcta 41 |||||||||||||||||||| Sbjct: 11392 agtgggagggagctaagcta 11411
>gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, complete sequence Length = 182940 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cgagtccaagctccaggagctgga 199 ||||||||| |||||||||||||| Sbjct: 122575 cgagtccaaactccaggagctgga 122598
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cgacggcaagttcctgcacg 450 |||||||||||||||||||| Sbjct: 3525458 cgacggcaagttcctgcacg 3525477
>gb|BC101184.2| Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E, mRNA (cDNA clone MGC:120036 IMAGE:40017963), complete cds Length = 1699 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 gtcaccaacatcatcgtccccacc 518 ||||||||||||| |||||||||| Sbjct: 354 gtcaccaacatcagcgtccccacc 377
>gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete sequence Length = 177375 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aggccaaggacatcaacaag 332 |||||||||||||||||||| Sbjct: 155415 aggccaaggacatcaacaag 155396
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tcgcggactacttcgacgtg 236 |||||||||||||||||||| Sbjct: 2627817 tcgcggactacttcgacgtg 2627798
>gb|L38827.1|CFIB14C Cellulomonas fimi ORF gene, 3' end of cds, beta-1, 4-cellobiohydrolase (CbhB) gene, complete cds Length = 3776 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcgacgtgatcgccgggacg 248 |||||||||||||||||||| Sbjct: 2887 tcgacgtgatcgccgggacg 2868 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,838,704 Number of Sequences: 3902068 Number of extensions: 3838704 Number of successful extensions: 102875 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100222 Number of HSP's gapped (non-prelim): 2632 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
