Clone Information

BLAST Search Result

Clone Name	bart42f03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precur...	70	5e-12
2	P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precurso...	67	4e-11
3	P4HA2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precur...	64	2e-10
4	P4HA2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precur...	64	3e-10
5	P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precur...	64	3e-10
6	P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1....	63	6e-10
7	P4HA2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precur...	63	6e-10
8	P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precur...	57	2e-08
9	P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precur...	55	1e-07
10	P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precur...	55	1e-07
11	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	35	0.17
12	SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	34	0.29
13	CH60_ANASL (Q9AMJ8) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	33	0.50
14	CH602_PROMA (Q7TV93) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	33	0.50
15	ZN575_HUMAN (Q86XF7) Zinc finger protein 575	33	0.66
16	CH601_SYNPX (Q7TTX1) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	33	0.66
17	CH601_ANASP (Q8YQZ8) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	33	0.66
18	CH602_PROMP (Q7TU44) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	32	0.86
19	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	32	1.1
20	RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2	32	1.1
21	CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	32	1.1
22	EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1...	32	1.1
23	CH602_PROMM (Q7TUS4) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	32	1.1
24	NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 prec...	32	1.5
25	CH60_SYNP7 (P22879) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	32	1.5
26	CH601_SYNP6 (P12834) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	32	1.5
27	NEST_HUMAN (P48681) Nestin	32	1.5
28	EGLN1_MOUSE (Q91YE3) Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-...	31	1.9
29	CH60_AZOSE (Q5P7G2) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	31	1.9
30	EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1...	31	2.5
31	DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)	31	2.5
32	YM09_PARTE (P15610) Hypothetical 22.9 kDa protein (ORF9)	31	2.5
33	PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacema...	30	3.3
34	FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related ...	30	3.3
35	QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)	30	3.3
36	GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix...	30	3.3
37	CH601_SYNY3 (Q05972) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	30	3.3
38	CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	30	4.3
39	IE68_PRVKA (P24827) Immediate-early protein RSP40	30	4.3
40	RRMJ3_MOUSE (Q9DBE9) Putative rRNA methyltransferase 3 (EC 2.1.1...	30	4.3
41	GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4) (End...	30	4.3
42	FA53B_MOUSE (Q8BGR5) Protein FAM53B	30	5.6
43	SH3BG_MOUSE (Q9WUZ7) SH3 domain-binding glutamic acid-rich prote...	30	5.6
44	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	30	5.6
45	AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	30	5.6
46	AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	30	5.6
47	AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	30	5.6
48	AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	30	5.6
49	STATB_CAEEL (Q20977) Signal transducer and activator of transcri...	30	5.6
50	CH60_GUITH (O78419) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	30	5.6
51	SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor	29	7.3
52	RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-) ...	29	7.3
53	CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	7.3
54	CYP37_ARATH (P82869) Peptidyl-prolyl cis-trans isomerase CYP37, ...	29	7.3
55	SPR2D_MOUSE (O70555) Small proline-rich protein 2D	29	7.3
56	MEIS1_XENLA (P79937) Homeobox protein Meis1 (XMeis1)	29	7.3
57	AROC2_BACCR (Q81C42) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp...	29	7.3
58	CH60_BORPE (P48210) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	7.3
59	CH60_BORPA (Q7W134) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	7.3
60	CH60_BORBR (Q7WNS4) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	7.3
61	IBP1_PIG (Q75ZP3) Insulin-like growth factor-binding protein 1 p...	29	9.5
62	MYP0_HETFR (P20938) Myelin P0 protein precursor (Myelin protein ...	29	9.5
63	RL2_THEMA (P38510) 50S ribosomal protein L2	29	9.5
64	CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1...	29	9.5

>P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 559

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 39/110 (35%), Positives = 62/110 (56%)
 Frame = +1

Query: 175 FDPSRVVQLSWHPRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSS 354
           + P +V    ++P A L K  +SD E   + ELAK KL ++ V D+ +GK V +  R S 
Sbjct: 316 YAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISK 375

Query: 355 GMFLEKSQDEVVAMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
             +L++ + +VV  + +RI   T L  E  E +QI +Y  G  Y+PH+D+
Sbjct: 376 SAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDH 425

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>P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 35/98 (35%), Positives = 54/98 (55%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ V D E+GK   ++ R S   +L   +D VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 432

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>P4HA2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 539

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 34/116 (29%), Positives = 61/116 (52%)
 Frame = +1

Query: 181 PSRVVQLSWHPRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGM 360
           P +V  L + P A L K  + D+E + + ELA  KL+++ V ++++G+   +  R S   
Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSA 374

Query: 361 FLEKSQDEVVAMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA 528
           +L+   D V+  +  RI  +T L     E +Q+ +Y  G  Y+PH+D+   +   A
Sbjct: 375 WLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNA 430

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>P4HA2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 537

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 33/106 (31%), Positives = 55/106 (51%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + E+AK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 397

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDYFHDKNNQA 528
           A +  R+   T L  +  E +Q+ +Y  G +YEPH+D+    +  A
Sbjct: 398 ARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDA 443

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>P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 534

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + +LAK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 396

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           A + +R+   T L  +  E +Q+ +Y  G +YEPH+D+
Sbjct: 397 AKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDF 434

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>P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1.14.11.2) (4-PH|
           alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 516

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 34/98 (34%), Positives = 51/98 (52%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SD E + + ELAK +L ++ V D E+GK   +  R S   +L   +  VV
Sbjct: 317 PRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVV 376

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+
Sbjct: 377 SRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 414

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>P4HA2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 535

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 32/98 (32%), Positives = 53/98 (54%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           P    +   +SD E + + E+AK KL ++ V D ++G    +  R S   +LE+  D VV
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 395

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           A +  R+   T L  +  E +Q+ +Y  G +YEPH+D+
Sbjct: 396 ARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDF 433

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>P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 31/98 (31%), Positives = 51/98 (52%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   +D VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 432

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>P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 30/98 (30%), Positives = 51/98 (52%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   ++ VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 432

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>P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 30/98 (30%), Positives = 51/98 (52%)
 Frame = +1

Query: 211 PRAFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVV 390
           PR       +SDAE + + +LAK +L ++ +++  +G       R S   +L   ++ VV
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVV 394

Query: 391 AMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYDY 504
           + I  RI   T L     E +Q+ +Y  G +YEPH+D+
Sbjct: 395 SRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDF 432

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>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = -1

Query: 358  CQSWFALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
            C+       G +F  HC PP     C   ARSC     P G PC
Sbjct: 1262 CRHSLGRGGGLTFTCHCVPPFWGLRCERVARSCRELQCPVGIPC 1305

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>SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1165

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +1

Query: 223  LHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAMIE 402
            +++ F SD  CD  IE  K+++ K    DNE  K+     RT++   L    ++ + ++ 
Sbjct: 913  IYEFFWSDY-CDWYIEFTKERIYKKAPEDNEEEKAKVENERTTALYTLHYVLEKALRILH 971

Query: 403  ERI-----AAWTFLPSENGESIQILHY 468
              +       W  LP+  GESI +  +
Sbjct: 972  PFMPYITEELWHKLPNAEGESISLAEF 998

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>CH60_ANASL (Q9AMJ8) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKSV +E+  + GM  +K
Sbjct: 153 NDDEVRQMIAEALDKVGKEAVISLEEGKSVTTELEVTEGMRFDK 196

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>CH602_PROMA (Q7TV93) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 545

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+++E+  + GM  +K
Sbjct: 153 NDEEVGQMIADAMDKVGKEGVISLEEGKSMETELEVTEGMRFDK 196

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>ZN575_HUMAN (Q86XF7) Zinc finger protein 575|
          Length = 245

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -1

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTP 230
           P   PP   SQ+ P P  S G  PRPR  P
Sbjct: 28  PHQGPPQKPSQSAPGPTASAGSPPRPRRRP 57

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>CH601_SYNPX (Q7TTX1) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+++E+  + GM  +K
Sbjct: 153 NDEEVGKMIADAMDKVGKEGVISLEEGKSMETELEVTEGMRFDK 196

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>CH601_ANASP (Q8YQZ8) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKSV +E+  + GM  +K
Sbjct: 153 NDDEVGQMIAEAMDKVGKEGVISLEEGKSVTTELEITEGMRFDK 196

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>CH602_PROMP (Q7TU44) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 544

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGEMIANAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -1

Query: 331  GRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
            G +F  HC  P     C   ARSC     P G PC
Sbjct: 1270 GLTFTCHCAQPFWGPRCERVARSCRELQCPVGVPC 1304

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>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
 Frame = -2

Query: 252  LRVREEPLVQERSGVPRELDDAGGVEGAATAGDA*RGE------SSRSGEVKREDEEEGK 91
            LRV ++ L+   S +  +L  A G EG      A +GE      +S  GE + E+EE  +
Sbjct: 1192 LRVSQDLLLSAHSTL--QLARARGQEGPGDVDRAAQGERVKGVGASEGGEEEEEEEETEE 1249

Query: 90   ------SHGPARWSHGGENG 49
                    G ARW+ GG+ G
Sbjct: 1250 VAEAAGGSGRARWARGGQAG 1269

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>CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 545

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGRMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

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>EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)|
           (Hypoxia-inducible factor prolyl 4-hydroxylase)
          Length = 503

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 199 LSWHPRAFLHKGFLSDAECDHMIELAKDK-LEKSMVADNESGKSVQSEVRTS 351
           LS  P  F   GFLSD EC  +I LA+ K L++S +   E  +   S ++ S
Sbjct: 139 LSLKPLLFEIPGFLSDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSAMQVS 190

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>CH602_PROMM (Q7TUS4) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 544

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDEEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

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>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = -1

Query: 358  CQSWFALRSGRSFPTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
            C+       G +F  HC  P     C   ARSC     P G PC
Sbjct: 1263 CRPSLGRGGGLTFTCHCVQPFWGLRCERVARSCRELQCPVGIPC 1306

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>CH60_SYNP7 (P22879) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDFEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

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>CH601_SYNP6 (P12834) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ K  V   E GKS+ +E+  + GM  +K
Sbjct: 153 NDFEVGQMIADAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDK 196

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>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 141  ESSRSGEVKREDEEEGKSHGPARWSHGGENG 49
            +   SGE   ED+EEG+  G  RW  G   G
Sbjct: 1411 DEEESGEEGEEDQEEGREPGAGRWGPGSSVG 1441

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>EGLN1_MOUSE (Q91YE3) Egl nine homolog 1 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2)
           (HIF-PH2) (HPH-2) (SM-20)
          Length = 400

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = -2

Query: 240 EEPLVQERSGVPRELDDAGGVEGAATAGD-A*RGESSRSGEVKREDEEEGKSHGPARWSH 64
           E P  Q     PR     GG  GAA AG  A RG+S+ +  V   ++      GP     
Sbjct: 62  EAPRAQPAPAQPRVAPPPGGAPGAARAGGAARRGDSAAASRVPGPEDAAQARSGPGPAEP 121

Query: 63  GGEN 52
           G E+
Sbjct: 122 GSED 125

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>CH60_AZOSE (Q5P7G2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 550

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK---------SQDEVVA 393
           SDA+   +I  + DK+ K  V   E GKS+Q+E+    GM  ++         + D+ VA
Sbjct: 154 SDADIGEIIAKSMDKVGKEGVITVEDGKSLQNELDVVEGMQFDRGYLSPYFINNPDKQVA 213

Query: 394 MIE 402
           ++E
Sbjct: 214 ILE 216

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>EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)|
           (Hypoxia-inducible factor prolyl 4-hydroxylase)
          Length = 502

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 199 LSWHPRAFLHKGFLSDAECDHMIELAKDK-LEKSMVADNESGKSVQSEVRTS 351
           LS  P  F   GFL+D EC  +I LA+ K L++S +   E  +   S ++ S
Sbjct: 138 LSLKPLLFEIPGFLTDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSTMQVS 189

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>DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)|
          Length = 772

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -1

Query: 358 CQSWFALRSGRS-FPTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
           CQ+    + G S +   CPP  T + C SP   C   P   G  C
Sbjct: 454 CQNGGTCQEGASGYMCTCPPGYTGRNCSSPVSRCQHNPCHNGATC 498

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>YM09_PARTE (P15610) Hypothetical 22.9 kDa protein (ORF9)|
          Length = 204

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 192 DAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHG 82
           D+   EG A++GD     S   G+   +DEEE  S G
Sbjct: 48  DSSDDEGGASSGDEGEASSDDEGDASSDDEEEASSDG 84

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>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (hPER)
          Length = 1290

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
 Frame = -2

Query: 240  EEPLVQERSGVPRELDDAGGVEGAATAGDA*RGE----------SSRSGEVKREDEEEGK 91
            ++PL  E  G+  E  + GG E  ++ G +  GE          +S S ++  E+EEEG+
Sbjct: 1216 DDPLFSELDGLGLEPMEEGGGEQGSSGGGSGEGEGCEEAQGGAKASSSQDLAMEEEEEGR 1275

Query: 90   S 88
            S
Sbjct: 1276 S 1276

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>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1)
          Length = 451

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 189 AGGVEGAATAGDA*RGES-SRSGEVKREDEEEGKSHGPARWSHGGENGRESEMKPG 25
           AG +E A     A +GE+ + + E++ +++   +  G A     GE+G+E E K G
Sbjct: 84  AGALEAAKAEALAGKGEAGAAAAELEEKEKAAEEKKGAAEGGKDGESGKEGEKKNG 139

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>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)|
          Length = 387

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 189 AGGVEGAATAGDA*RGES-SRSGEVKREDEEEGKSHGPARWSHGGENGRESEMKPG 25
           AG +E A     A +GE+ + + E++ +++   +  G A     GE+G+E E K G
Sbjct: 84  AGALEAAKAEALAGKGEAGAAAAELEEKEKAAEEKKGAAEGGKDGESGKEGEKKNG 139

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>GOGA2_RAT (Q62839) Golgin subfamily A member 2 (Cis-Golgi matrix protein|
           GM130)
          Length = 986

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 259 HMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAMIEERI 411
           H+    + KLEK  V   + G SV  E   +  + +EK Q   + +++E++
Sbjct: 754 HLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQSRFLEVMQEKV 804

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>CH601_SYNY3 (Q05972) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 540

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ +  V   E GKS+ +E+  + GM  +K
Sbjct: 152 NDEEVGQMIANAMDKVGQEGVISLEEGKSMTTELEITEGMRFDK 195

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>CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 532

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -2

Query: 258 VALRVREEPLVQERSGVPRELDDAGGVEGAATAGDA*RGESSRSGE 121
           VALR  EEPL Q  +      D+A  V  A  AGDA  G ++ +GE
Sbjct: 442 VALRAMEEPLRQIATNAG---DEASVVANAVKAGDADYGYNAATGE 484

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>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 207 PRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHGGENGRESE 37
           P E    G   G+   GD   GE     E + EDE++G+         GGE+G + E
Sbjct: 280 PPEDGSDGEGSGSDDGGD---GEDEDEDEDEDEDEDDGEDEEDEEGEDGGEDGEDGE 333

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>RRMJ3_MOUSE (Q9DBE9) Putative rRNA methyltransferase 3 (EC 2.1.1.-) (rRNA|
           (uridine-2'-O-)-methyltransferase 3)
          Length = 838

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = -2

Query: 240 EEPLVQERSGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHG 61
           E+   Q ++ VP+E +   G E     G   RG SS S     EDE+  K       S G
Sbjct: 573 EKKSPQGQNEVPKETEAILGTEAVTDPGGEERGNSSDSDSSSSEDEDSWKV------SRG 626

Query: 60  GENGRESE 37
            + GR S+
Sbjct: 627 VKRGRGSK 634

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>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTP 230
           P+  P PS S + PSP+ S  RTP P  TP
Sbjct: 405 PSSQPSPSVSPS-PSPSPSASRTPTPTPTP 433

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>FA53B_MOUSE (Q8BGR5) Protein FAM53B|
          Length = 422

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -1

Query: 325 SFPTHCPPP--STSQACPSPARSCGRTPRPRGTPC 227
           SFP +CPP   ST  + P  AR      R R  PC
Sbjct: 238 SFPEYCPPSANSTPASTPELARRSSGLARSRSQPC 272

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>SH3BG_MOUSE (Q9WUZ7) SH3 domain-binding glutamic acid-rich protein (SH3BGR|
           protein)
          Length = 214

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -2

Query: 225 QERSGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEE--GKSHGPARWSHGGEN 52
           +E S +P   D AG  EGAA   +  + E S   E ++ED E+    S    +    GE+
Sbjct: 109 EEASSLPNG-DVAGEAEGAAEGTE--KAEKSGENEAQKEDSEDTGELSESQEKKEEEGED 165

Query: 51  GRESE 37
           G E E
Sbjct: 166 GEEGE 170

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -1

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTP 230
           P   PPPS+    P P    GRTP P G P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314

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>AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 249 RVREEPLVQERSGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

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>AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 249 RVREEPLVQERSGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

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>AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 249 RVREEPLVQERSGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

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>AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 249 RVREEPLVQERSGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R+ ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEQGYTRKTNNAGGLEGGMTTG 303

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>STATB_CAEEL (Q20977) Signal transducer and activator of transcription b (Zinc|
           finger protein STAT-B)
          Length = 966

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +1

Query: 217 AFLHKGFLSDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEKSQDEVVAM 396
           AF+ K  LS AE     +   D L    +A NE    +Q  ++    + L   +DE   +
Sbjct: 165 AFVSKHNLS-AEAYQGFKECADSLLSGKIAQNEQLPFIQRTLQICENVILN-FEDEKQHL 222

Query: 397 IEERIAAWTFLPSENGESI---QILHYKNGEKYEPHYDYFHDKNNQALGG 537
           + + +  W     +   +    Q LHYK  +     ++YF +   Q L G
Sbjct: 223 MSDVLLVWAMKQQKLSIATLHTQQLHYKELDLINLQFEYFGELLQQTLSG 272

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>CH60_GUITH (O78419) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 529

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +D E   MI  A DK+ +  V   E GKS  +E+  + GM  EK
Sbjct: 153 NDIETGKMIADAIDKVGREGVISLEEGKSTITELEMTEGMCFEK 196

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>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor|
          Length = 910

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = -2

Query: 237 EPLVQERSGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHGG 58
           E L Q  +G P   +  G  E  A+  +    ES+  G+V+   EEE   H       GG
Sbjct: 77  ESLEQTPAGAPSTANGQGS-ETEASLSNTSAAESAPPGDVEGPGEEEEGPHAAGTLPPGG 135

Query: 57  ENGRESE 37
             G E E
Sbjct: 136 IEGPEEE 142

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>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)|
           (Pam/highwire/rpm-1 protein) (Regulator of presynaptic
           morphology protein 1) (Synapse defective protein 3)
          Length = 3766

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 283 CPSPARSCGRTPRPRGTPC 227
           C +   +CGR PRP+GT C
Sbjct: 689 CSARGVACGRVPRPKGTMC 707

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>CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           +DAE   MI  A D++ +  V   E GKS  + +  + GM  EK
Sbjct: 153 NDAEVGKMIADAIDRVGREGVISLEEGKSTSTSLEITEGMQFEK 196

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>CYP37_ARATH (P82869) Peptidyl-prolyl cis-trans isomerase CYP37, chloroplast|
           precursor (EC 5.2.1.8) (PPIase CYP37) (Rotamase CYP37)
           (Thylakoid lumen PPIase of 38 kDa) (p38) (TLP38)
          Length = 461

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 427 LPSENGESIQILHYKNGEKYEPHYDYF---HDKNNQALGG 537
           LP     ++ + H +N E+Y   Y +F   +DK N  LGG
Sbjct: 367 LPLSVYGAVAMAHSENSEEYSSPYQFFFYLYDKRNSGLGG 406

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>SPR2D_MOUSE (O70555) Small proline-rich protein 2D|
          Length = 85

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 319 PTHCPPPSTSQACPSPARSCGRTPRPRGTPC 227
           P  CPPP   + CP P     + P P   PC
Sbjct: 33  PEPCPPPKCPEPCPPP-----KCPEPCPEPC 58

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>MEIS1_XENLA (P79937) Homeobox protein Meis1 (XMeis1)|
          Length = 390

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -2

Query: 243 REEPLVQERSGVPRELDDAGGVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSH 64
           R  PL  + S   R+ DDA  +    T G +  G +S SG+    ++ +G  +  A  S 
Sbjct: 203 RSAPLTDQPSW-SRDHDDAASIRSGGTPGPSSGGHTSHSGD-NSSEQGDGLDNSIASPST 260

Query: 63  GGENGRESEMK 31
           G ++  + E K
Sbjct: 261 GDDDDPDKEKK 271

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>AROC2_BACCR (Q81C42) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 249 RVREEPLVQERSGVPRELDDAGGVEGAATAG 157
           +V +E L  E  G  R  ++AGG+EG  T G
Sbjct: 273 KVHDEILWDEEKGYTRRTNNAGGLEGGMTTG 303

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>CH60_BORPE (P48210) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

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>CH60_BORPA (Q7W134) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

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>CH60_BORBR (Q7WNS4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 547

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 241 SDAECDHMIELAKDKLEKSMVADNESGKSVQSEVRTSSGMFLEK 372
           SDA    +I  A DK+ K  V   E GKS+++E+    GM  ++
Sbjct: 154 SDASIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDR 197

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>IBP1_PIG (Q75ZP3) Insulin-like growth factor-binding protein 1 precursor|
           (IGFBP-1) (IBP-1) (IGF-binding protein 1)
          Length = 262

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = -1

Query: 334 SGRSFPTHCPPPSTSQA--CPSPARSCGRTPRPRGTPC 227
           +G   P HC P S  +   CP    SC    RP G  C
Sbjct: 24  AGAPQPLHCAPCSAERLALCPPVPASCPEATRPAGCGC 61

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>MYP0_HETFR (P20938) Myelin P0 protein precursor (Myelin protein zero) (Myelin|
           peripheral protein) (MPP)
          Length = 246

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +1

Query: 322 KSVQSEVRTSSGMFLEKSQDEVVAMIEERIAAWTFLPSENGESIQILHYKNGEKYEPHYD 501
           K+V S+V    G +  +   ++  +      +W F P  + + I I HY NG  Y   + 
Sbjct: 38  KTVGSDVTLYCGFWSNEYVSDLTTL------SWRFRPDNSRDIISIFHYGNGVPYIEKWG 91

Query: 502 YFHDK 516
            F  +
Sbjct: 92  QFRGR 96

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>RL2_THEMA (P38510) 50S ribosomal protein L2|
          Length = 276

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = -2

Query: 183 GVEGAATAGDA*RGESSRSGEVKREDEEEGKSHGPARWSHGGENGRESEMKPGSPW 16
           GV G     +   G++ R   + R     G +  P    HGG  GR     P SPW
Sbjct: 194 GVVGNEDHKNEVHGKAGRVRWLGRRPHVRGVAMNPVDHPHGGGEGRGKGHHPTSPW 249

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>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth|
           regulatory gene 11 protein)
          Length = 301

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
 Frame = -2

Query: 252 LRVREEPL--VQERSGVPRELDDAGGVEGAATAGDA*RGES-SRSGEVKREDEEEGKSHG 82
           +  R E L  VQE  G      D  G  G A      +G++    GE + + E +G + G
Sbjct: 195 VEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAEGQAEAKGDAPG 254

Query: 81  PARWSHGG-----ENGRESEMKPG 25
           P R   GG     ENG E++  PG
Sbjct: 255 P-RGEAGGQAEARENGEEAKELPG 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,139,561
Number of Sequences: 219361
Number of extensions: 1175683
Number of successful extensions: 5942
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 5237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5897
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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