ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474146.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1890 Score = 343 bits (173), Expect = 4e-91 Identities = 296/337 (87%) Strand = Plus / Plus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 13 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 72 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 73 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 132 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 133 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 192 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 193 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 252 Query: 450 ggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttc 509 || |||||||| || ||||| || | | |||| |||||||| ||||| ||||||||||| Sbjct: 253 ggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctattcgagcttt 312 Query: 510 gtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||| ||||||||||||||||||||||||||| Sbjct: 313 gtgccgccgatggtgtacgcggtgctggggagctcga 349
>dbj|AK107225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D09, full insert sequence Length = 1297 Score = 343 bits (173), Expect = 4e-91 Identities = 296/337 (87%) Strand = Plus / Plus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 186 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 245 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 246 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 305 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 306 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 365 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 366 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 425 Query: 450 ggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttc 509 || |||||||| || ||||| || | | |||| |||||||| ||||| ||||||||||| Sbjct: 426 ggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctattcgagcttt 485 Query: 510 gtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||| ||||||||||||||||||||||||||| Sbjct: 486 gtgccgccgatggtgtacgcggtgctggggagctcga 522
>dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A04, full insert sequence Length = 2181 Score = 343 bits (173), Expect = 4e-91 Identities = 296/337 (87%) Strand = Plus / Plus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 183 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 242 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 243 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 302 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 303 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 362 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 363 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 422 Query: 450 ggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttc 509 || |||||||| || ||||| || | | |||| |||||||| ||||| ||||||||||| Sbjct: 423 ggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctattcgagcttt 482 Query: 510 gtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||| ||||||||||||||||||||||||||| Sbjct: 483 gtgccgccgatggtgtacgcggtgctggggagctcga 519
>dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I19, full insert sequence Length = 2338 Score = 335 bits (169), Expect = 9e-89 Identities = 295/337 (87%) Strand = Plus / Plus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 189 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 248 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 249 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 308 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||| | || Sbjct: 309 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactacttc 368 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 369 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 428 Query: 450 ggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttc 509 || |||||||| || ||||| || | | |||| |||||||| ||||| ||||||||||| Sbjct: 429 ggcattagctacgcgaagctggcgagcttgcctccgatcatcggcctctattcgagcttt 488 Query: 510 gtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||| ||||||||||||||||||||||||||| Sbjct: 489 gtgccgccgatggtgtacgcggtgctggggagctcga 525
>gb|AY105934.1| Zea mays PCO089998 mRNA sequence Length = 2279 Score = 321 bits (162), Expect = 1e-84 Identities = 294/338 (86%) Strand = Plus / Plus Query: 207 gtgcacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtg 266 ||||||||||||||| ||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 189 gtgcacaaggtggcgccgccaccggcgcggagcacggcgagcaagatgaaggtgagggtg 248 Query: 267 aaggagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcg 326 ||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 249 aaggagaccttcttccccgacgacccgttccgggcgttcaaggggcagccgccggggacg 308 Query: 327 cagtgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactcc 386 |||||| | |||||| || |||||| |||||| | ||||| |||||||| |||||||| Sbjct: 309 cagtggctcatggcggtcaggtacctcttccccatcctggactgggtgccgagctactcc 368 Query: 387 ctctccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccc 446 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 369 ttgtcgctcttcaagtccgacctcgtcgcgggcctcaccattgccagcctcgccattcct 428 Query: 447 cagggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagc 506 ||||| |||||||| || ||||| || | | |||| || || || || || ||||||||| Sbjct: 429 cagggcattagctacgcgaagctggcaagcttgcctcccataatcgggctgtattcgagc 488 Query: 507 ttcgtgccgccgctggtgtacgcggtgctggggagctc 544 |||||||||||| ||||||||||||||||||||||||| Sbjct: 489 ttcgtgccgccgatggtgtacgcggtgctggggagctc 526
>emb|X96761.1|SSSULPTRP S.stapfianus mRNA for sulphate transporter protein Length = 2515 Score = 278 bits (140), Expect = 2e-71 Identities = 290/340 (85%) Strand = Plus / Plus Query: 206 ggtgcacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggt 265 |||||||||||||| | ||| |||| |||||||||||||||||||| ||||| || | | Sbjct: 156 ggtgcacaaggtggtgccgccgccgccgcagagcacggcgagcaagctgaagacgaggtt 215 Query: 266 gaaggagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggc 325 ||||||||| | ||||| ||||||||||||||| | || | ||||| || | | ||| Sbjct: 216 gaaggagacgctgttcccggacgacccgttccgggggtttcaagggcaaccagcgagggt 275 Query: 326 gcagtgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactc 385 ||||||||| ||||||| ||||||||||||||| | ||||| ||| |||| | |||||| Sbjct: 276 gcagtgggtcctggcggtgaagtacctgttccccatcctggactggctgccggcctactc 335 Query: 386 cctctccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatccc 445 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 336 cctctcgctcttcaagtccgacctcatcgccggcctcaccattgccagcctcgccatacc 395 Query: 446 ccagggtattagctaggccaagcttgccaacctgccgccgatcataggcctatattcgag 505 ||||| || ||||| || |||||||| |||||||| || | || ||| |||||||||| Sbjct: 396 tcaggggatcagctacgcaaagcttgcaaacctgcctcctctaatcggcttatattcgag 455 Query: 506 cttcgtgccgccgctggtgtacgcggtgctggggagctcg 545 |||||| || ||| |||||||||||||||||||||||||| Sbjct: 456 cttcgttcccccgttggtgtacgcggtgctggggagctcg 495
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 248 bits (125), Expect = 2e-62 Identities = 212/241 (87%) Strand = Plus / Minus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 26554 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 26495 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 26494 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 26435 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 26434 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 26375 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 26374 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 26315 Query: 450 g 450 | Sbjct: 26314 g 26314 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 25845 attcgagctttgtgccgccgatggtgtacgcggtgctggggagctcga 25798
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 248 bits (125), Expect = 2e-62 Identities = 212/241 (87%) Strand = Plus / Minus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 33254293 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 33254234 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 33254233 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 33254174 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 33254173 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 33254114 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 33254113 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 33254054 Query: 450 g 450 | Sbjct: 33254053 g 33254053 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 33253584 attcgagctttgtgccgccgatggtgtacgcggtgctggggagctcga 33253537
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 248 bits (125), Expect = 2e-62 Identities = 212/241 (87%) Strand = Plus / Minus Query: 210 cacaaggtggcggcgcagccggcgcagagcacggcgagcaagatgaaggggaaggtgaag 269 |||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||| Sbjct: 136942 cacaaggtggcggcgccgccggcgcagagcacggcgagcaagctgaaggcgagggtgaag 136883 Query: 270 gagaccttcttccccgacgacccgttccggagcttcaaggggcagccggtgcgggcgcag 329 ||||||||||||||||||||||||||||| | ||||||||| ||||| || | | || Sbjct: 136882 gagaccttcttccccgacgacccgttccgcgggttcaaggggaagccgctgacgaccaag 136823 Query: 330 tgggtgctggcggccaagtacctgttccccgtgctggagtgggtgcccggctactccctc 389 ||||| |||||| ||||||||||||| | || || ||||||||| |||||||| || Sbjct: 136822 tgggtcatggcggtgcagtacctgttcccgatcctcgactgggtgcccagctactccttc 136763 Query: 390 tccctcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccag 449 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136762 tccctcttcaaatccgacctcgtcgccggcctcaccatcgccagcctcgccatccctcag 136703 Query: 450 g 450 | Sbjct: 136702 g 136702 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 136233 attcgagctttgtgccgccgatggtgtacgcggtgctggggagctcga 136186
>dbj|AK066932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093F02, full insert sequence Length = 2327 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 397 tcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatta 456 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 350 tcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatca 409 Query: 457 gctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccgc 516 |||| |||||||| |||||||| || || || | ||||| ||||||||||||||||||| Sbjct: 410 gctacgccaagctcgccaacctccctcccgtcctcggcctctattcgagcttcgtgccgc 469 Query: 517 cgctggtgtacgcggtgctggggagctcga 546 |||||||||||||| || |||||||||||| Sbjct: 470 cgctggtgtacgcgatgatggggagctcga 499
>ref|NM_196532.1| Oryza sativa (japonica cultivar-group) Similar to sulfate transporter (ATST1) (OSJNBa0053G13.6), mRNA Length = 1977 Score = 147 bits (74), Expect = 4e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 401 gtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagcta 460 ||||||| ||||||||||| ||||||| |||||||||||| | || ||||| || ||||| Sbjct: 246 gtccgacgtcgtcgccggcgtcaccatcgccagcctcgccgtgccgcagggcatcagcta 305 Query: 461 ggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccgccgct 520 |||||||| | | |||| || || ||||| |||||||| |||||||||||||||||||| Sbjct: 306 cgccaagctcggcgacctccctcccatcatgggcctatactcgagcttcgtgccgccgct 365 Query: 521 ggtgtacgcggtgctggggagctcga 546 ||||||||||||| |||||||||||| Sbjct: 366 ggtgtacgcggtgatggggagctcga 391 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccgg 299 |||||| |||||||||||||||||||||||| Sbjct: 114 ggagacgttcttccccgacgacccgttccgg 144
>dbj|AK067270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O05, full insert sequence Length = 2494 Score = 143 bits (72), Expect = 7e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 402 tccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagctag 461 |||||| ||||| ||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 407 tccgacgtcgtctccggcctcaccattgccagcctcgccatcccgcagggaatcagctac 466 Query: 462 gccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccgccgctg 521 |||||||| ||||||||||| || ||||| || ||||||||||||||||||||| ||||| Sbjct: 467 gccaagctcgccaacctgcctccaatcattggactatattcgagcttcgtgccgtcgctg 526
>ref|NM_191791.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2001 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 289 ttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatc 348 Query: 456 agctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccg 515 ||||| ||| || |||||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 349 agctacgcccgcctcgccaacctccctccaatcatcggcctctattcgagcttcgtgccg 408 Query: 516 ccgctggtgtacgcggtgctggggagctc 544 ||| || ||||||||||| | |||||||| Sbjct: 409 ccgttgatgtacgcggtgttcgggagctc 437 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccg 298 |||||| ||||||||||||||||||||||| Sbjct: 162 ggagacgttcttccccgacgacccgttccg 191
>dbj|AK121195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M22, full insert sequence Length = 2808 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 659 ttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatc 718 Query: 456 agctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccg 515 ||||| ||| || |||||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 719 agctacgcccgcctcgccaacctccctccaatcatcggcctctattcgagcttcgtgccg 778 Query: 516 ccgctggtgtacgcggtgctggggagctc 544 ||| || ||||||||||| | |||||||| Sbjct: 779 ccgttgatgtacgcggtgttcgggagctc 807 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccg 298 |||||| ||||||||||||||||||||||| Sbjct: 532 ggagacgttcttccccgacgacccgttccg 561
>ref|NM_192602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagctaggc 463 ||||||| |||||||| ||||||| ||||||||| ||||||| ||||| || ||||| || Sbjct: 255 cgacctcctcgccggcgtcaccatcgccagcctctccatcccgcagggcatcagctacgc 314 Query: 464 caagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgccgccgctggt 523 || || ||| | | |||||| |||| ||||| |||||| ||||||||||||||||||| Sbjct: 315 caccctcgccggcatcccgccggtcatcggcctctattcgtgcttcgtgccgccgctggt 374 Query: 524 gtacgcggtgctggggagctcga 546 |||||||||| |||||||||||| Sbjct: 375 gtacgcggtgatggggagctcga 397 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 tcttccccgacgacccgttccg 298 |||||||||||||||||||||| Sbjct: 128 tcttccccgacgacccgttccg 149
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 397 tcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatta 456 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 3258207 tcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatca 3258148 Query: 457 gctaggccaagcttgccaacct 478 |||| |||||||| |||||||| Sbjct: 3258147 gctacgccaagctcgccaacct 3258126 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 3258006 attcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcga 3257959 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 4956846 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 4956892 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 4956706 gtgaaggagacgttcttcgccgacgacccgtt 4956737 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcg 438 ||||||| | |||||||||||| |||||||||||| Sbjct: 4966954 cgacctcattgccggcctcacccttgccagcctcg 4966988
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 397 tcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatta 456 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 171006 tcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatca 171065 Query: 457 gctaggccaagcttgccaacct 478 |||| |||||||| |||||||| Sbjct: 171066 gctacgccaagctcgccaacct 171087 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 171207 attcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcga 171254
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 397 tcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatta 456 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 3258318 tcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatca 3258259 Query: 457 gctaggccaagcttgccaacct 478 |||| |||||||| |||||||| Sbjct: 3258258 gctacgccaagctcgccaacct 3258237 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 3258117 attcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcga 3258070 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 4956061 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 4956107 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 4955921 gtgaaggagacgttcttcgccgacgacccgtt 4955952 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcg 438 ||||||| | |||||||||||| |||||||||||| Sbjct: 4966169 cgacctcattgccggcctcacccttgccagcctcg 4966203
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 397 tcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatta 456 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 83080 tcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatca 83021 Query: 457 gctaggccaagcttgccaacct 478 |||| |||||||| |||||||| Sbjct: 83020 gctacgccaagctcgccaacct 82999 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 82879 attcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcga 82832
>gb|BT018869.1| Zea mays clone EL01N0561H12.d mRNA sequence Length = 1990 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 416 cggcctcaccattgccagcctcgccatcccccagggtattagctaggccaagcttgccaa 475 |||||||||||||||||||||||||||||| ||||| | || |||||||| ||||| Sbjct: 1990 cggcctcaccattgccagcctcgccatcccgcagggactcttatacgccaagctcgccaa 1931 Query: 476 cctgccgccgatcataggcctatattcgagcttcgtgccgccgctggtgtacgcggtgct 535 ||||||||| ||| | |||| || ||| ||||||||||||||||| | |||||| |||| Sbjct: 1930 cctgccgccaatcgttggcccattttccagcttcgtgccgccgctcatctacgcgctgct 1871 Query: 536 ggggagctcg 545 |||||||||| Sbjct: 1870 ggggagctcg 1861
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14282107 tcgagcttcgtgccgccgctggtgtacgcggtgatggggagctcga 14282152 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 401 gtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagcta 460 ||||||| ||||||||||| ||||||| |||||||||||| | || ||||| || ||||| Sbjct: 14281926 gtccgacgtcgtcgccggcgtcaccatcgccagcctcgccgtgccgcagggcatcagcta 14281985 Query: 461 ggccaagcttgccaacctgccgccgatcataggcctat 498 |||||||| | | |||| || || ||||| ||||||| Sbjct: 14281986 cgccaagctcggcgacctccctcccatcatgggcctat 14282023 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccgg 299 |||||| |||||||||||||||||||||||| Sbjct: 14281794 ggagacgttcttccccgacgacccgttccgg 14281824
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 29382 tcgagcttcgtgccgccgctggtgtacgcggtgatggggagctcga 29427 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 401 gtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagcta 460 ||||||| ||||||||||| ||||||| |||||||||||| | || ||||| || ||||| Sbjct: 29201 gtccgacgtcgtcgccggcgtcaccatcgccagcctcgccgtgccgcagggcatcagcta 29260 Query: 461 ggccaagcttgccaacctgccgccgatcataggcctat 498 |||||||| | | |||| || || ||||| ||||||| Sbjct: 29261 cgccaagctcggcgacctccctcccatcatgggcctat 29298 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccgg 299 |||||| |||||||||||||||||||||||| Sbjct: 29069 ggagacgttcttccccgacgacccgttccgg 29099
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14290349 tcgagcttcgtgccgccgctggtgtacgcggtgatggggagctcga 14290394 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 401 gtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagcta 460 ||||||| ||||||||||| ||||||| |||||||||||| | || ||||| || ||||| Sbjct: 14290168 gtccgacgtcgtcgccggcgtcaccatcgccagcctcgccgtgccgcagggcatcagcta 14290227 Query: 461 ggccaagcttgccaacctgccgccgatcataggcctat 498 |||||||| | | |||| || || ||||| ||||||| Sbjct: 14290228 cgccaagctcggcgacctccctcccatcatgggcctat 14290265 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccgg 299 |||||| |||||||||||||||||||||||| Sbjct: 14290036 ggagacgttcttccccgacgacccgttccgg 14290066
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23243952 attcgtgcttcgtgccgccgctggtgtacgcggtgatggggagctcga 23243999 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 29981825 ttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatc 29981884 Query: 456 agcta 460 ||||| Sbjct: 29981885 agcta 29981889 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctc 544 |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 29982024 attcgagcttcgtgccgccgttgatgtacgcggtgttcgggagctc 29982069 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccg 298 |||||| ||||||||||||||||||||||| Sbjct: 29981698 ggagacgttcttccccgacgacccgttccg 29981727 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 tcttccccgacgacccgttccg 298 |||||||||||||||||||||| Sbjct: 23243634 tcttccccgacgacccgttccg 23243655 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcgcagccggcgcagagcacg 242 ||||||||||||||||||||| Sbjct: 36035089 gcgcagccggcgcagagcacg 36035069
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30694 attcgtgcttcgtgccgccgctggtgtacgcggtgatggggagctcga 30741 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 tcttccccgacgacccgttccg 298 |||||||||||||||||||||| Sbjct: 30376 tcttccccgacgacccgttccg 30397
>ref|XM_475419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 505 gcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 39 gcttcgtgccgccgctggtgtacgcggtgatggggagctcga 80
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 505 gcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 45477 gcttcgtgccgccgctggtgtacgcggtgatggggagctcga 45436
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 505 gcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23359941 gcttcgtgccgccgctggtgtacgcggtgatggggagctcga 23359900
>dbj|AK109779.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B11, full insert sequence Length = 1436 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 505 gcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 456 gcttcgtgccgccgctggtgtacgcggtgatggggagctcga 497
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 402 tccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||| ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 2297389 tccgacgtcgtctccggcctcaccattgccagcctcgccatcccgcagg 2297341 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||| ||||| ||| |||| |||||||||||||| |||||||||||| Sbjct: 6266748 attcgtgcttcctgctgccgttggtgtacgcggtgatggggagctcga 6266795 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctg 521 ||||||||||||||||||||||| Sbjct: 2297122 attcgagcttcgtgccgccgctg 2297100 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 447 cagggtattagctaggccaagcttgccaacctgccgccgatcat 490 ||||| || ||||| |||||||| ||||||||||| || ||||| Sbjct: 2297250 cagggaatcagctacgccaagctcgccaacctgcctccaatcat 2297207
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480C01 Length = 151100 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 126383 ttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatc 126442 Query: 456 agcta 460 ||||| Sbjct: 126443 agcta 126447 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctc 544 |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 126582 attcgagcttcgtgccgccgttgatgtacgcggtgttcgggagctc 126627 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 269 ggagaccttcttccccgacgacccgttccg 298 |||||| ||||||||||||||||||||||| Sbjct: 126256 ggagacgttcttccccgacgacccgttccg 126285
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 402 tccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||| ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 19190 tccgacgtcgtctccggcctcaccattgccagcctcgccatcccgcagg 19142 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctg 521 ||||||||||||||||||||||| Sbjct: 18923 attcgagcttcgtgccgccgctg 18901 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 447 cagggtattagctaggccaagcttgccaacctgccgccgatcat 490 ||||| || ||||| |||||||| ||||||||||| || ||||| Sbjct: 19051 cagggaatcagctacgccaagctcgccaacctgcctccaatcat 19008
>ref|XM_477511.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 71.9 bits (36), Expect = 2e-09 Identities = 124/153 (81%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||| ||| ||||||| || ||||||||||||| ||||| || Sbjct: 289 ttcaagtacgacctcctcgcaggcatcaccatcgctggcctcgccatcccgcagggcatc 348 Query: 456 agctaggccaagcttgccaacctgccgccgatcataggcctat----attcgagcttcgt 511 ||||| ||| || |||||||| || || ||||| ||||| | ||||||||||||| Sbjct: 349 agctacgcccgcctcgccaacctccctcccatcatcggcctttgtacattcgagcttcgt 408 Query: 512 gccgccgctggtgtacgcggtgctggggagctc 544 |||||| || ||||||||||| | |||||||| Sbjct: 409 gccgccattgctgtacgcggtgttcgggagctc 441
>ref|XM_470586.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 303 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 349 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 163 gtgaaggagacgttcttcgccgacgacccgtt 194
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 38701 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 38655 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 38841 gtgaaggagacgttcttcgccgacgacccgtt 38810 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcg 438 ||||||| | |||||||||||| |||||||||||| Sbjct: 28593 cgacctcattgccggcctcacccttgccagcctcg 28559
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 21300 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 21346 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 21160 gtgaaggagacgttcttcgccgacgacccgtt 21191 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcg 438 ||||||| | |||||||||||| |||||||||||| Sbjct: 31408 cgacctcattgccggcctcacccttgccagcctcg 31442
>gb|AF493792.1| Oryza sativa putative sulphate transporter (Sultr1-1) mRNA, complete cds Length = 1989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 303 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 349 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 163 gtgaaggagacgttcttcgccgacgacccgtt 194
>gb|AF493790.1| Oryza sativa putative sulphate transporter (Sultr1-1) gene, exons 1 through 13 and complete cds Length = 5436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 1434 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 1480 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 1294 gtgaaggagacgttcttcgccgacgacccgtt 1325
>dbj|AK106552.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G06, full insert sequence Length = 1778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 1147 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 1101 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 1287 gtgaaggagacgttcttcgccgacgacccgtt 1256
>dbj|AK103007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116I10, full insert sequence Length = 2791 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagg 450 |||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 688 cgacctcgtctccggcctcaccattgccagcctctgcataccccagg 734 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 548 gtgaaggagacgttcttcgccgacgacccgtt 579
>emb|X96431.1|HVHVST1 Horduem vulgare mRNA for high affinity sulphate transporter (ST1 gene) Length = 2442 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctcgccatcccccagggtattagctaggccaagctt 470 ||||||||||||||||| ||||||||| ||| || |||| ||| | || ||||||||| Sbjct: 384 gtcgccggcctcaccatcgccagcctctgcatacctcaggacattggttatgccaagctt 443 Query: 471 gccaacctgc 480 |||||||||| Sbjct: 444 gccaacctgc 453 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 236 ggtgaaggagacgttcttcgccgacgacccg 266
>gb|U52867.1|HVU52867 Hordeum vulgare high affinity sulfate transporter HVST1 mRNA, complete cds Length = 2456 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctcgccatcccccagggtattagctaggccaagctt 470 ||||||||||||||||| ||||||||| ||| || |||| ||| | || ||||||||| Sbjct: 429 gtcgccggcctcaccatcgccagcctctgcatacctcaggacattggttatgccaagctt 488 Query: 471 gccaacctgc 480 |||||||||| Sbjct: 489 gccaacctgc 498 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 281 ggtgaaggagacgttcttcgccgacgacccg 311
>ref|NM_115049.2| Arabidopsis thaliana SULTR3;1 (SULFATE TRANSPORTER 1); sulfate porter/ sulfate transporter AT3G51895 (SULTR3;1) mRNA, complete cds Length = 2267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 325 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 384 Query: 454 ttagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgc 513 | || || ||||| ||||| ||| |||| || || | ||||| |||||||| || || | Sbjct: 385 tcagttacgccaaacttgctaacttgcccccaattcttggcctttattcgagttttgtac 444 Query: 514 cgccgctggtgtacgcggtgctggggag 541 |||| |||| ||||||||||| ||||| Sbjct: 445 cgccattggtatacgcggtgctagggag 472
>gb|AY099873.1| Arabidopsis thaliana sulfate transporter ATST1 (At3g51895) mRNA, complete cds Length = 2266 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 325 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 384 Query: 454 ttagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgc 513 | || || ||||| ||||| ||| |||| || || | ||||| |||||||| || || | Sbjct: 385 tcagttacgccaaacttgctaacttgcccccaattcttggcctttattcgagttttgtac 444 Query: 514 cgccgctggtgtacgcggtgctggggag 541 |||| |||| ||||||||||| ||||| Sbjct: 445 cgccattggtatacgcggtgctagggag 472
>emb|BX822461.1|CNS0A7F1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 303 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 362 Query: 454 ttagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgc 513 | || || ||||| ||||| ||| |||| || || | ||||| |||||||| || || | Sbjct: 363 tcagttacgccaaacttgctaacttgcccccaattcttggcctttattcgagttttgtac 422 Query: 514 cgccgctggtgtacgcggtgctggggag 541 |||| |||| ||||||||||| ||||| Sbjct: 423 cgccattggtatacgcggtgctagggag 450
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctcga 546 ||||| ||||| ||| |||| |||||||||||||| |||||||||||| Sbjct: 60824 attcgtgcttcctgctgccgttggtgtacgcggtgatggggagctcga 60871
>dbj|D89631.1| Arabidopsis thaliana mRNA for sulfate transporter, complete cds Length = 2045 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 274 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 333 Query: 454 ttagctaggccaagcttgccaacctgccgccgatcataggcctatattcgagcttcgtgc 513 | || || ||||| ||||| ||| |||| || || | ||||| |||||||| || || | Sbjct: 334 tcagttacgccaaacttgctaacttgcccccaattcttggcctttattcgagttttgtac 393 Query: 514 cgccgctggtgtacgcggtgctggggag 541 |||| |||| ||||||||||| ||||| Sbjct: 394 cgccattggtatacgcggtgctagggag 421
>ref|XM_470587.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1959 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 404 cgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtattagctaggc 463 ||||||| | |||||||||||| |||||||||||| ||| || |||| || |||| || Sbjct: 276 cgacctcattgccggcctcacccttgccagcctcgtcatacctcaggacatcggctacgc 335 Query: 464 caagcttgccaacctgcc 481 |||||||| |||||||| Sbjct: 336 gaagcttgctaacctgcc 353
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctc 544 ||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 11086020 attcgagcttcgtgccgccattgctgtacgcggtgttcgggagctc 11085975 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||| ||| ||||||| || ||||||||||||| ||||| || Sbjct: 11086208 ttcaagtacgacctcctcgcaggcatcaccatcgctggcctcgccatcccgcagggcatc 11086149 Query: 456 agcta 460 ||||| Sbjct: 11086148 agcta 11086144 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 168 ccgccggcagcggccgagatggagatggagat 199 |||||||| ||||||||||||| ||||||||| Sbjct: 24914576 ccgccggcggcggccgagatggggatggagat 24914607
>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045F02 Length = 143668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 499 attcgagcttcgtgccgccgctggtgtacgcggtgctggggagctc 544 ||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 68539 attcgagcttcgtgccgccattgctgtacgcggtgttcgggagctc 68494 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 396 ttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggtatt 455 ||||||| ||||||| |||| ||| ||||||| || ||||||||||||| ||||| || Sbjct: 68727 ttcaagtacgacctcctcgcaggcatcaccatcgctggcctcgccatcccgcagggcatc 68668 Query: 456 agcta 460 ||||| Sbjct: 68667 agcta 68663
>emb|AJ512491.2|TUR512491 Triticum urartu partial st1.1a gene for sulphate transporter, exons 1-14 Length = 4187 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 409 tcgtcgccggcctcaccattgccagcctc 437 ||||||||||||||||||| ||||||||| Sbjct: 976 tcgtcgccggcctcaccatcgccagcctc 1004
>emb|AJ512821.1|TAE512821 Triticum aestivum stB1.1a gene for sulphate transporter, exons 1-14, genome B Length = 4071 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccgtt 295 |||||||||||| |||||| ||||||||||||| Sbjct: 878 ggtgaaggagacgttcttcgccgacgacccgtt 910 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 1026 gtcgccggcctcaccatcgccagcctc 1052
>emb|AJ512819.1|TAE512819 Triticum aestivum stB1.1b gene for sulphate transporter, exons 1-14, genome B Length = 3880 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 409 tcgtcgccggcctcaccattgccagcctc 437 ||||||||||||||||||| ||||||||| Sbjct: 833 tcgtcgccggcctcaccatcgccagcctc 861 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||||||||| ||||||||||| Sbjct: 687 ggtgaaggagaccttctttgccgacgacccg 717
>emb|AJ512817.1|TAE512817 Triticum aestivum stA1.1a gene for sulphate transporter, exons 1-14 Length = 4072 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 409 tcgtcgccggcctcaccattgccagcctc 437 ||||||||||||||||||| ||||||||| Sbjct: 976 tcgtcgccggcctcaccatcgccagcctc 1004
>gb|DQ177527.1| Raphanus sativus sulfate transporter mRNA, complete cds Length = 2044 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcggt 532 |||||||||||||||||| |||| |||||||| Sbjct: 374 tcgagcttcgtgccgccgatggtatacgcggt 405
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 168 ccgccggcagcggccgagatggagatggagat 199 |||||||| ||||||||||||| ||||||||| Sbjct: 98208 ccgccggcggcggccgagatggggatggagat 98239
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 168 ccgccggcagcggccgagatggagatggagat 199 |||||||| ||||||||||||| ||||||||| Sbjct: 149027 ccgccggcggcggccgagatggggatggagat 149058
>dbj|AK111068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E03, full insert sequence Length = 707 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 168 ccgccggcagcggccgagatggagatggagat 199 |||||||| ||||||||||||| ||||||||| Sbjct: 147 ccgccggcggcggccgagatggggatggagat 116
>dbj|AK102458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B17, full insert sequence Length = 1679 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 264 gtgaaggagaccttcttccccgacgacccgtt 295 ||||||||||| |||||| ||||||||||||| Sbjct: 1288 gtgaaggagacgttcttcgccgacgacccgtt 1257 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 419 cctcaccattgccagcctcgccatcccccagg 450 ||||||||||||||||||| ||| ||||||| Sbjct: 1136 cctcaccattgccagcctctgcataccccagg 1105
>gb|DQ288900.1| Raphanus sativus sulfate transporter RSultr3.2A gene, complete cds Length = 4739 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcggt 532 |||||||||||||||||| |||| |||||||| Sbjct: 721 tcgagcttcgtgccgccgatggtatacgcggt 752
>emb|AJ512822.1|TAE512822 Triticum aestivum stD1.1a gene for sulphate transporter, exons 1-14, genome D Length = 4129 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 850 ggtgaaggagacgttcttcgccgacgacccg 880 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 tcgccggcctcaccattgccagcctc 437 |||||||||||||||| ||||||||| Sbjct: 999 tcgccggcctcaccatcgccagcctc 1024
>emb|AJ512820.1|TAE512820 Triticum aestivum stD1.1b gene for sulphate transporter, exons 1-14, genome D Length = 3881 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 824 gtcgccggcctcaccatcgccagcctc 850
>emb|AJ512816.1|ASP512816 Aegilops speltoides st1.1a gene for sulphate transporter, exons 1-14 Length = 3876 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 828 gtcgccggcctcaccatcgccagcctc 854
>emb|AJ512815.1|ASP512815 Aegilops speltoides st1.1a gene for sulphate transporter, exons 1-14 Length = 4133 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 1008 gtcgccggcctcaccatcgccagcctc 1034 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 860 ggtgaaggagacgttcttcgccgacgacccg 890
>gb|AF355602.1| Zea mays sulfate transporter ST1 mRNA, complete cds Length = 2640 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 269 ggtgaaggagacgttcttcgccgacgacccg 299
>gb|AY189896.1| Hordeum vulgare subsp. vulgare high-affinity sulfate transporter HvST1 gene, complete cds Length = 5480 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 1859 gtcgccggcctcaccatcgccagcctc 1885 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 1711 ggtgaaggagacgttcttcgccgacgacccg 1741
>emb|AJ238245.1|TTA238245 Triticum tauschii st2 gene, exons 1-13 Length = 5329 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 1380 gtcgccggcctcaccatcgccagcctc 1406
>emb|AJ238244.1|TTA238244 Triticum tauschii st1 gene, exons 1-13 Length = 6601 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 2643 ggtgaaggagacgttcttcgccgacgacccg 2673 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 tcgccggcctcaccattgccagcctc 437 |||||||||||||||| ||||||||| Sbjct: 2792 tcgccggcctcaccatcgccagcctc 2817
>emb|AJ234872.1|HVU234872 Hordeum vulgare genomic DNA fragment; clone MWG2268 Length = 422 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 gtcgccggcctcaccattgccagcctc 437 ||||||||||||||||| ||||||||| Sbjct: 250 gtcgccggcctcaccatcgccagcctc 276 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgacccg 293 |||||||||||| |||||| ||||||||||| Sbjct: 102 ggtgaaggagacgttcttcgccgacgacccg 132
>ref|NM_112469.1| Arabidopsis thaliana SULTR3;4 (sulfate transporter); sulfate transporter AT3G15990 (SULTR3;4) mRNA, complete cds Length = 2256 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 420 ctcaccattgccagcctcgccatcccccagggtattagctaggccaagct 469 |||||||||||||| |||||||| || ||||| || ||||| || ||||| Sbjct: 383 ctcaccattgccagtctcgccattcctcagggaatcagctatgcaaagct 432
>ref|XM_389406.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09230.1) partial mRNA Length = 597 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 aggggcagccggtgcgggcgcagtgg 332 ||||||||| |||||||||||||||| Sbjct: 210 aggggcagctggtgcgggcgcagtgg 185
>emb|AJ512818.1|TAE512818 Triticum aestivum stA1.1b gene for sulphate transporter, exons 1-14, genome A Length = 3842 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 tcgccggcctcaccattgccagcctc 437 |||||||||||||||| ||||||||| Sbjct: 813 tcgccggcctcaccatcgccagcctc 838 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgaccc 292 |||||||||||||||||| || |||||||| Sbjct: 664 ggtgaaggagaccttctttcctgacgaccc 693
>emb|AJ512492.1|TUR512492 Triticum urartu partial st1.1b gene for sulphate transporter, exons 1-14 Length = 3856 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 tcgccggcctcaccattgccagcctc 437 |||||||||||||||| ||||||||| Sbjct: 814 tcgccggcctcaccatcgccagcctc 839 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ggtgaaggagaccttcttccccgacgaccc 292 |||||||||||||||||| || |||||||| Sbjct: 665 ggtgaaggagaccttctttcctgacgaccc 694
>emb|AJ416460.1|BNA416460 Brassica napus mRNA for high-affinity sulfate transporter (st1 gene) Length = 2262 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 498 tattcgagcttcgtgccgccgctggtgtacgcgg 531 ||||||||||||||||| || |||||||| |||| Sbjct: 433 tattcgagcttcgtgccaccactggtgtatgcgg 466
>emb|AJ601439.1| Brassica oleracea mRNA for sulfate transporter (lST3.2 gene) Length = 2219 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 501 tcgagcttcgtgccgccgctggtgtacgcg 530 |||||||||||||||||| |||| |||||| Sbjct: 390 tcgagcttcgtgccgccgatggtatacgcg 419
>dbj|AB054645.1| Arabidopsis thaliana mRNA for sulfate transporter Sultr3;4, complete cds Length = 2256 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 420 ctcaccattgccagcctcgccatcccccagggtattagctaggccaagct 469 |||||||||||||| |||||||| || ||||| || ||||| || ||||| Sbjct: 383 ctcaccattgccagtctcgccattcctcagggaatcagctatgcaaagct 432
>ref|NM_190528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1947 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcgcagccggcgcagagcacg 242 ||||||||||||||||||||| Sbjct: 807 gcgcagccggcgcagagcacg 787
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattggg 203 ||||||||||||||||||||| Sbjct: 41898 gagatggagatggagattggg 41878
>gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, complete sequence Length = 164107 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 actccctctccctcttcaagt 402 ||||||||||||||||||||| Sbjct: 151652 actccctctccctcttcaagt 151672
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattggg 203 ||||||||||||||||||||| Sbjct: 143804 gagatggagatggagattggg 143784
>gb|AC117769.9| Mus musculus chromosome 19, clone RP24-511E21, complete sequence Length = 218248 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 actccctctccctcttcaagt 402 ||||||||||||||||||||| Sbjct: 148942 actccctctccctcttcaagt 148922
>gb|AY369239.1| Klebsiella oxytoca cytochrome d subunit A and cytochrome d subunit B genes, complete cds Length = 2751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 agcttcgtgccgccgctggtg 524 ||||||||||||||||||||| Sbjct: 1989 agcttcgtgccgccgctggtg 2009
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 aagatgaaggggaaggtgaaggaga 273 |||||||||| |||||||||||||| Sbjct: 30973 aagatgaaggtgaaggtgaaggaga 30997
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gccggcagcggccgagatgga 190 ||||||||||||||||||||| Sbjct: 1247062 gccggcagcggccgagatgga 1247082
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 aagatgaaggggaaggtgaaggaga 273 |||||||||| |||||||||||||| Sbjct: 1135167 aagatgaaggtgaaggtgaaggaga 1135191
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcgcagccggcgcagagcacg 242 ||||||||||||||||||||| Sbjct: 47814 gcgcagccggcgcagagcacg 47794
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcgcagccggcgcagagcacg 242 ||||||||||||||||||||| Sbjct: 133767 gcgcagccggcgcagagcacg 133747
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ggtggtgcacaaggtggcggc 223 ||||||||||||||||||||| Sbjct: 1491747 ggtggtgcacaaggtggcggc 1491767
>emb|X04766.1|XLNUPLR2 Xenopus laevis mRNA for nucleoplasmin Length = 800 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 aagatgaaggggaaggtgaaggaga 273 ||||||||||||||| ||||||||| Sbjct: 502 aagatgaaggggaagctgaaggaga 526
>gb|BC072778.1| Xenopus laevis nucleoplasmin, mRNA (cDNA clone MGC:79999 IMAGE:5074504), complete cds Length = 862 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 aagatgaaggggaaggtgaaggaga 273 ||||||||||||||| ||||||||| Sbjct: 524 aagatgaaggggaagctgaaggaga 548
>emb|Y10012.1|KPCYDAB K.pneumoniae cydA and cydB gene Length = 2747 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 agcttcgtgccgccgctggtg 524 ||||||||||||||||||||| Sbjct: 1986 agcttcgtgccgccgctggtg 2006
>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete sequence Length = 297848 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattggg 203 ||||||||||||||||||||| Sbjct: 132760 gagatggagatggagattggg 132740
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 aagatgaaggggaaggtgaaggaga 273 |||||||||| |||||||||||||| Sbjct: 1132888 aagatgaaggtgaaggtgaaggaga 1132912
>ref|NM_121965.2| Arabidopsis thaliana SULTR3;5 (sulfate transporter 3;5); sulfate transporter AT5G19600 (SULTR3;5) mRNA, complete cds Length = 2303 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 486 atcataggcctatattcgagcttcgtgccgcc 517 ||||||||||||||||| || || |||||||| Sbjct: 428 atcataggcctatattcaagttttgtgccgcc 459
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 ggaaggtgaaggagaccttc 278 |||||||||||||||||||| Sbjct: 101038 ggaaggtgaaggagaccttc 101019
>ref|XM_517293.1| PREDICTED: Pan troglodytes similar to sec1 family domain containing 2; syntaxin binding protein 1-like 1 (LOC461325), mRNA Length = 1490 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 362 cggcagcggccgagatggag 381
>gb|AF001295.1| Homo sapiens tyrosinase related protein 1 (TYRP1) gene, complete cds Length = 24667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cgagcaagatgaaggggaag 263 |||||||||||||||||||| Sbjct: 1773 cgagcaagatgaaggggaag 1792
>gb|AC161595.3| Mus musculus BAC clone RP23-471H21 from chromosome 9, complete sequence Length = 189223 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 59909 gagatggagatggagattgg 59890
>ref|NM_152540.3| Homo sapiens sec1 family domain containing 2 (SCFD2), mRNA Length = 3204 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 496 cggcagcggccgagatggag 515
>gb|BC012458.1| Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone IMAGE:3860908), partial cds Length = 2154 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 262 cggcagcggccgagatggag 281
>ref|XM_543339.2| PREDICTED: Canis familiaris similar to transmembrane protein 7 (LOC486214), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aagatgaaggggaaggtgaaggag 272 ||||||||||||||||||| |||| Sbjct: 1262 aagatgaaggggaaggtgacggag 1239
>ref|XM_745247.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g05900) partial mRNA Length = 2082 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctcgtcgccggcctcaccat 427 |||||||||||||||||||| Sbjct: 1788 ctcgtcgccggcctcaccat 1769
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 accacggcaatggcggcgag 122 |||||||||||||||||||| Sbjct: 97929 accacggcaatggcggcgag 97910
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 caccacggcaatggcggcgagggc 125 |||||| ||||||||||||||||| Sbjct: 3120167 caccacagcaatggcggcgagggc 3120190
>emb|AL138753.8| Human DNA sequence from clone RP11-3L8 on chromosome 9 Contains the TYRP1 gene for tyrosinase-related protein 1, the 3' end of a novel gene and the 5' end of a novel gene (FLJ38505 FLJ90271), complete sequence Length = 162151 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cgagcaagatgaaggggaag 263 |||||||||||||||||||| Sbjct: 67438 cgagcaagatgaaggggaag 67457
>emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20 on chromosome Xq22.2-22.3, complete sequence Length = 167943 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 71924 gagatggagatggagattgg 71905
>gb|AY299407.1| Homo sapiens syntaxin binding protein 1-like 1 (STXBP1L1) mRNA, complete cds Length = 3204 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 496 cggcagcggccgagatggag 515
>gb|AC157577.6| Mus musculus chromosome 1, clone RP24-145K21, complete sequence Length = 169199 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gatggagatggagattgggg 204 |||||||||||||||||||| Sbjct: 160424 gatggagatggagattgggg 160405
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15 Length = 123209 Score = 40.1 bits (20), Expect = 7.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 4469 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 4410 Query: 454 ttagctaggccaagcttgccaacctgcc 481 | || || ||||| ||||| ||| |||| Sbjct: 4409 tcagttacgccaaacttgctaacttgcc 4382
>gb|BC021137.1| Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone MGC:32058 IMAGE:4866354), complete cds Length = 3165 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 453 cggcagcggccgagatggag 472
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cgccaccaccgccggcagcg 179 |||||||||||||||||||| Sbjct: 2653074 cgccaccaccgccggcagcg 2653055
>emb|CR857410.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1424 (from clone DKFZp469L1424) Length = 2372 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 483 cggcagcggccgagatggag 502
>gb|AC023742.4| Drosophila melanogaster X BAC RP98-43C24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172203 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 agcggccgagatggagatggagat 199 |||||| ||||||||||||||||| Sbjct: 124143 agcggcagagatggagatggagat 124120
>dbj|AK096833.1| Homo sapiens cDNA FLJ39514 fis, clone PUAEN1000085 Length = 2221 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 482 cggcagcggccgagatggag 501
>dbj|AK090909.1| Homo sapiens cDNA FLJ33590 fis, clone BRAMY2012555, weakly similar to Homo sapiens mRNA for 28kD interferon responsive protein Length = 2163 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aagatgaaggggaaggtgaaggag 272 ||||||||||||||||||| |||| Sbjct: 1149 aagatgaaggggaaggtgatggag 1126
>gb|AE012481.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 389 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggcagccggtgcgggcgcag 329 |||||||||||||||||||| Sbjct: 9239 ggcagccggtgcgggcgcag 9220
>gb|AC108682.2| Homo sapiens Xp BAC RP11-325L9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 74143 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 agatggagatggagattggggtggtgca 211 ||||||||||||||||||| ||| |||| Sbjct: 26730 agatggagatggagattggagtgatgca 26757
>dbj|AB074276.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla10988, full insert sequence Length = 2347 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 469 cggcagcggccgagatggag 488
>gb|AC073683.3| Mus musculus chromosome 17 clone RP23-124G7, complete sequence Length = 213137 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggtgcgggcgcagtgggtgc 336 |||||||||||||||||||| Sbjct: 141379 ggtgcgggcgcagtgggtgc 141360
>gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, complete sequence Length = 193537 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 91190 gcaggccgtggtagtcggtg 91209
>gb|AC098821.3| Homo sapiens BAC clone RP11-331F12 from 4, complete sequence Length = 80845 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 58935 cggcagcggccgagatggag 58916
>ref|NM_173821.1| Homo sapiens hypothetical protein FLJ33590 (FLJ33590), mRNA Length = 2163 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aagatgaaggggaaggtgaaggag 272 ||||||||||||||||||| |||| Sbjct: 1149 aagatgaaggggaaggtgatggag 1126
>dbj|AB168496.1| Macaca fascicularis testis cDNA clone: QtsA-12554, similar to human sec1 family domain containing 2 (SCFD2), mRNA, RefSeq: NM_152540.3 Length = 1959 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 745 cggcagcggccgagatggag 764
>dbj|AB235153.1| Homo sapiens KIAA2008 mRNA for hypothetical protein, partial cds Length = 4491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 1688 gcaggccgtggtagtcggtg 1669
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 caaggtggcggcgcagccggcgca 235 |||||| ||||||||||||||||| Sbjct: 3299640 caaggttgcggcgcagccggcgca 3299663
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggcagccggtgcgggcgcag 329 |||||||||||||||||||| Sbjct: 681475 ggcagccggtgcgggcgcag 681456
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 ggaaggtgaaggagaccttc 278 |||||||||||||||||||| Sbjct: 19381812 ggaaggtgaaggagaccttc 19381793
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 26921029 gagatggagatggagattgg 26921048
>gb|AC131097.6| Homo sapiens BAC clone RP11-789L24 from 2, complete sequence Length = 187030 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aagatgaaggggaaggtgaaggag 272 ||||||||||||||||||| |||| Sbjct: 84774 aagatgaaggggaaggtgatggag 84751
>gb|BT006013.1| Drosophila melanogaster LD11736 full insert cDNA Length = 4440 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 agcggccgagatggagatggagat 199 |||||| ||||||||||||||||| Sbjct: 2819 agcggcagagatggagatggagat 2842
>gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complete sequence Length = 180973 Score = 40.1 bits (20), Expect = 7.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 182 cgagatggagatggagattggggtggtg 209 ||||||||||||||||| |||||||||| Sbjct: 171188 cgagatggagatggaga-tggggtggtg 171214
>emb|BX832405.1|CNS09YVW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZF01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2221 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 486 atcataggcctatattcgagcttcgtgccgcc 517 ||||||||||||||||| || || |||||||| Sbjct: 400 atcataggcctatattcaagttttgtgccgcc 431
>gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, complete sequence Length = 211748 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gaaggggaaggtgaaggaga 273 |||||||||||||||||||| Sbjct: 156931 gaaggggaaggtgaaggaga 156950
>gb|AC026881.6|AC026881 Homo sapiens chromosome 3 clone RP11-211B19 map 3p, complete sequence Length = 146022 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctccctctccctcttcaagt 402 |||||||||||||||||||| Sbjct: 128965 ctccctctccctcttcaagt 128984
>gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J12 map 3p, complete sequence Length = 204797 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ctccctctccctcttcaagt 402 |||||||||||||||||||| Sbjct: 46860 ctccctctccctcttcaagt 46841
>gb|AC026179.5|AC026179 Homo sapiens chromosome 3 clone RP11-264H3 map 3p, complete sequence Length = 166488 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctccctctccctcttcaagt 402 |||||||||||||||||||| Sbjct: 64189 ctccctctccctcttcaagt 64208
>dbj|AB061739.1| Arabidopsis thaliana Sultr3;5 mRNA for sulfate transporter, complete cds Length = 2310 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 486 atcataggcctatattcgagcttcgtgccgcc 517 ||||||||||||||||| || || |||||||| Sbjct: 428 atcataggcctatattcaagttttgtgccgcc 459
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 22429 gagatggagatggagattgg 22448
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 cggcgcagccggcgcagagcacggcgag 247 |||||||||||||| |||||||||||| Sbjct: 114808 cggcgcagccggcgacgagcacggcgag 114835
>dbj|AP001303.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24M9 Length = 45292 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cggccgagatggagatggagattg 201 |||| ||||||||||||||||||| Sbjct: 19336 cggcggagatggagatggagattg 19359
>dbj|AB012048.1| Arabidopsis thaliana gene for sulfate transporter, complete cds, clone:AST12 Length = 7012 Score = 40.1 bits (20), Expect = 7.4 Identities = 71/88 (80%) Strand = Plus / Plus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 1751 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 1810 Query: 454 ttagctaggccaagcttgccaacctgcc 481 | || || ||||| ||||| ||| |||| Sbjct: 1811 tcagttacgccaaacttgctaacttgcc 1838
>dbj|AB114297.1| Homo sapiens hGnTVb mRNA for UDP-N-acetylglucosamine: alpha1,6-D-mannoside beta1,6-N-acetylglucosaminyltransferase b, complete cds Length = 4040 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 1250 gcaggccgtggtagtcggtg 1231
>dbj|AB109185.1| Homo sapiens GnT-IX mRNA for N-Acetylglucosaminyltransferase IX, complete cds Length = 2476 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 1139 gcaggccgtggtagtcggtg 1120
>gb|AF218627.1|AF218627 Hordeum vulgare plasma membrane associated protein (pm19) mRNA, complete cds Length = 1000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 104 gagatggagatggagattgg 85
>gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembrane protein G1p (AtG1), putative nuclear DNA-binding protein G2p (AtG2), Em1 protein (ATEM1), putative chlorophyll synthetase (AtG4), putative transmembrane protein G5p (AtG5), putative acyl-coA dehydrogenase (AtG6), and calcium dependent protein kinase genes, complete cds; and unknown genes Length = 60000 Score = 40.1 bits (20), Expect = 7.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 394 tcttcaagtccgacctcgtcgccggcctcaccattgccagcctcgccatcccccagggta 453 ||||||| || || ||| ||||||| ||||||| || || ||||||||||| ||||| | Sbjct: 57816 tcttcaaatcagatctcatcgccggaatcaccatcgctagtctcgccatccctcagggca 57757 Query: 454 ttagctaggccaagcttgccaacctgcc 481 | || || ||||| ||||| ||| |||| Sbjct: 57756 tcagttacgccaaacttgctaacttgcc 57729
>emb|Z55469.1|HS42B8R H.sapiens CpG island DNA genomic Mse1 fragment, clone 42b8, reverse read cpg42b8.rt1a Length = 299 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 199 cggcagcggccgagatggag 180
>dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L24, full insert sequence Length = 1213 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggaaggtgaaggagaccttc 278 |||||||||||||||||||| Sbjct: 238 ggaaggtgaaggagaccttc 257
>gb|AC171276.3| Pan troglodytes BAC clone CH251-740N2 from chromosome unknown, complete sequence Length = 202258 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 111046 cggcagcggccgagatggag 111065
>gb|BC032453.1| Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone MGC:40484 IMAGE:5176029), complete cds Length = 2393 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 494 cggcagcggccgagatggag 513
>tpe|BN000652.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx123 gene for class III peroxidase 123 precursor, exons 1-3 Length = 2260 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggaaggtgaaggagaccttc 278 |||||||||||||||||||| Sbjct: 164 ggaaggtgaaggagaccttc 183
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 agcggccgagatggagatggagat 199 |||||| ||||||||||||||||| Sbjct: 81211 agcggcagagatggagatggagat 81188
>gb|DQ306260.1| Rhodococcus sp. T104 p-cumate-degrading gene cluster, complete sequence Length = 42397 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 gcggcgcctacggcggccaccacggcaa 112 |||||| |||||||||||| |||||||| Sbjct: 16311 gcggcggctacggcggccatcacggcaa 16284
>gb|AC120551.5| Mus musculus chromosome 1, clone RP24-338A22, complete sequence Length = 161994 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gatggagatggagattgggg 204 |||||||||||||||||||| Sbjct: 4559 gatggagatggagattgggg 4540
>gb|AC164881.2| Mus musculus BAC clone RP23-246D7 from chromosome 9, complete sequence Length = 201645 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagatggagatggagattgg 202 |||||||||||||||||||| Sbjct: 31399 gagatggagatggagattgg 31418
>ref|NM_198955.1| Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B (MGAT5B), transcript variant 2, mRNA Length = 4068 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 1250 gcaggccgtggtagtcggtg 1231
>ref|NM_144677.2| Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B (MGAT5B), transcript variant 1, mRNA Length = 4246 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcaggccgtggtagtcggtg 159 |||||||||||||||||||| Sbjct: 1428 gcaggccgtggtagtcggtg 1409
>gb|AC169792.2| Rhesus Macaque BAC CH250-117K11 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 186393 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcagcggccgagatggag 191 |||||||||||||||||||| Sbjct: 119751 cggcagcggccgagatggag 119770
>gb|AC069277.6| Homo sapiens chromosome 3 clone RP11-529B17 map 3p, complete sequence Length = 159908 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctccctctccctcttcaagt 402 |||||||||||||||||||| Sbjct: 112250 ctccctctccctcttcaagt 112269
>gb|AC023485.6| Homo sapiens chromosome 3 clone RP11-489D19 map 3p, complete sequence Length = 179304 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctccctctccctcttcaagt 402 |||||||||||||||||||| Sbjct: 11814 ctccctctccctcttcaagt 11833 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,293,886 Number of Sequences: 3902068 Number of extensions: 4293886 Number of successful extensions: 197682 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 194833 Number of HSP's gapped (non-prelim): 2845 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
