Clone Name | bart42e12 |
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Clone Library Name | barley_pub |
>NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)| (Deoxyribonuclease PA3) Length = 270 Score = 89.7 bits (221), Expect = 4e-18 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 7/131 (5%) Frame = +1 Query: 127 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 300 WG GH +A +++ EA + + +L S ++ LA + SWAD R +WS SLH Sbjct: 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60 Query: 301 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSS-SPFDPTESLMFLA 465 F D P +C Y RDC + C + AI NYT + DSS S + E+L FL Sbjct: 61 FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRVSDSSLSSENHAEALRFLV 115 Query: 466 HFVGDVHQPMH 498 HF+GD+ QP+H Sbjct: 116 HFIGDMTQPLH 126
>NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1)| (Deoxyribonuclease P1) Length = 270 Score = 89.7 bits (221), Expect = 4e-18 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 7/131 (5%) Frame = +1 Query: 127 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 300 WG GH +A +++ EA + + +L S ++ LA + SWAD R +WS SLH Sbjct: 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60 Query: 301 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSS-SPFDPTESLMFLA 465 F D P +C Y RDC + C + AI NYT + DSS S + E+L FL Sbjct: 61 FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRVSDSSLSSENHAEALRFLV 115 Query: 466 HFVGDVHQPMH 498 HF+GD+ QP+H Sbjct: 116 HFIGDMTQPLH 126
>NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuclease S1)| (Single-stranded-nucleate endonuclease) (Deoxyribonuclease S1) Length = 287 Score = 75.9 bits (185), Expect = 6e-14 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Frame = +1 Query: 127 WGKEGHYMTCKIADGFLTSEALTGVKALLPSWANGELAEVCSWADSQRFRY--RWSRSLH 300 WG GH IA F+ S + + +L + LA V +WAD+ ++ +S+ H Sbjct: 21 WGNLGHETVAYIAQSFVASSTESFCQNILGDDSTSYLANVATWADTYKYTDAGEFSKPYH 80 Query: 301 FADT----PGDCKFSYARDCHDTKGNKNVCVVGAINNYTAALQDSSSPFDPTESLMFLAH 468 F D P C Y RDC C + AI NYT L +S + + +L F+ H Sbjct: 81 FIDAQDNPPQSCGVDYDRDCGSAG-----CSISAIQNYTNILLESPNGSEALNALKFVVH 135 Query: 469 FVGDVHQPMH 498 +GD+HQP+H Sbjct: 136 IIGDIHQPLH 145
>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)| (Cell division cycle 2-like) Length = 952 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 270 ALAVRPRAHLRELAVGPRREERLHPRQRLARQE 172 AL ++P RE GPRRE++ H R+R +E Sbjct: 35 ALYIQPPQASRESGSGPRREKKKHSRERRRHKE 67
>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B| (Williams-Beuren syndrome chromosome region 9 protein) (WBRS9) (Williams syndrome transcription factor) (hWALP2) Length = 1483 Score = 29.6 bits (65), Expect = 5.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 162 RRRFPDERGVDGGEGAPPVVGQRRAR 239 R++FPD D G+ P VGQ R R Sbjct: 1454 RKKFPDRLAEDEGDSEPEAVGQSRGR 1479
>ADEC_DESVH (Q72EX7) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)| Length = 575 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -3 Query: 450 ALRRVKWAGRVLER-GGVVVDGPDHA 376 A+R+V AGR++ R G VVVD PDHA Sbjct: 339 AVRKVYAAGRLVARDGAVVVDLPDHA 364
>LAMA_DROME (Q00174) Laminin alpha chain precursor| Length = 3712 Score = 28.9 bits (63), Expect = 8.7 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query: 283 WSRSLHFADTPGDCKFSYARDCHD--TKGNKNVC 378 W+ HF+DTP DC+ + +D + T+ + +C Sbjct: 155 WTPWQHFSDTPADCETYFGKDTYKPITRDDDVIC 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,745,544 Number of Sequences: 219361 Number of extensions: 952108 Number of successful extensions: 3351 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3345 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)