ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart42e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemota... 29 3.4
2QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-) 28 5.8
3Y264_METEX (Q8GEK8) UPF0264 protein ORF22 28 7.5
4KLOT_RAT (Q9Z2Y9) Klotho precursor (EC 3.2.1.31) [Contains: Klot... 28 7.5

>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 119 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 30
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415



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>QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 271

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +1

Query: 25  SCRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALL 138
           S   L+ + DD GPPNA  LT   Q     EV   ALL
Sbjct: 137 SIDALDVSIDDYGPPNAAYLTAQAQ-PVVEEVLTSALL 173



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>Y264_METEX (Q8GEK8) UPF0264 protein ORF22|
          Length = 236

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/70 (27%), Positives = 25/70 (35%)
 Frame = -2

Query: 210 TVEVAGTAVGGEPEDAIVHGDGRGEQSRKGHXXXXXXXXXXGEEDGVGWALVVGGGFKDA 31
           TV      VGG    + V GDG G +                   GV +  +  GG  DA
Sbjct: 52  TVRAIVAGVGGRAVTSAVAGDGTGRE--------IAAAIATIAATGVDFIKIAVGGADDA 103

Query: 30  AASDGQEDAP 1
           A ++    AP
Sbjct: 104 ALAEAAAQAP 113



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>KLOT_RAT (Q9Z2Y9) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]|
          Length = 1014

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 140 PRPSPWTMASSGSPPTAVPATSTVAS 217
           P  SP  MA SG+P   +P+T  VAS
Sbjct: 103 PEDSPIVMAPSGAPLPPLPSTGDVAS 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,866,960
Number of Sequences: 219361
Number of extensions: 467948
Number of successful extensions: 1634
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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