ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 646 bits (326), Expect = 0.0 Identities = 437/474 (92%) Strand = Plus / Plus Query: 78 gagaatgggcagcgtcgatgcctccgagacgacagtcaccgggtgggccgccagggacgc 137 |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 36 gagaatgggcagcgtcgacgcctccgagaagacgatcaccgggtgggccgccagggacgc 95 Query: 138 caccggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggt 197 |||||||||||||||||||||||| |||| |||||||| || ||| ||||||||||||| Sbjct: 96 caccggccacctctccccctacacgtacaacctcaggaggacgggcgctgaagatgtggt 155 Query: 198 gttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacct 257 | |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 156 gctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacct 215 Query: 258 gggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 |||||||| || || |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 216 tggtgcttcaaaataccccatggtacccgggcatgaggtggtaggcgaggtggtggaggt 275 Query: 318 cgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtgatcgtggg 377 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 276 cgggccggaggtgagcaagtacagcgtcggcgacgtggtcggcgtgggggtgatcgtcgg 335 Query: 378 gtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagat 437 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 336 gtgctgccgcgactgccggccgtgcaaggccaacgttgagcagtactgcaacaagaagat 395 Query: 438 ctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgc 497 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 396 ctggtcgtacaacgacgtctacaccgacggcaagcccacgcagggcggcttcgcctccgc 455 Query: 498 catggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 456 catggtcgtcgaccagaagttcgtggtgaagatcccggcggggctggcgccgga 509
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 638 bits (322), Expect = e-180 Identities = 436/474 (91%) Strand = Plus / Plus Query: 78 gagaatgggcagcgtcgatgcctccgagacgacagtcaccgggtgggccgccagggacgc 137 |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 36 gagaatgggcagcgtcgacgcctccgagaagacgatcaccgggtgggccgccagggacgc 95 Query: 138 caccggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggt 197 |||||||||||||||||||||||| |||| |||||||| || ||| ||||||||||||| Sbjct: 96 caccggccacctctccccctacacgtacaacctcaggaggacgggcgctgaagatgtggt 155 Query: 198 gttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacct 257 | |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 156 gctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacct 215 Query: 258 gggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 |||||||| || || |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 216 tggtgcttcaaaataccccatggtacccgggcatgaggtggtaggcgaggtggtggaggt 275 Query: 318 cgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtgatcgtggg 377 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 276 cgggccggaggtgagcaagtacagcgtcggcgacgtggtcggcgtgggggtgatcgtcgg 335 Query: 378 gtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagat 437 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 336 gtgctgccgcgactgccggccgtgcaaggccaacgttgagcagtactgcaacaagaagat 395 Query: 438 ctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgc 497 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | Sbjct: 396 ctggtcgtacaacgacgtctacaccgacggcaagcccacgcagggcggcttcgcctcctc 455 Query: 498 catggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 456 catggtcgtcgaccagaagttcgtggtgaagatcccagcggggctagcgccgga 509
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 599 bits (302), Expect = e-168 Identities = 431/474 (90%) Strand = Plus / Plus Query: 78 gagaatgggcagcgtcgatgcctccgagacgacagtcaccgggtgggccgccagggacgc 137 ||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 87 gagaatgggcagcgtggacgcctccgagaagacgatcaccgggtgggccgccagggacac 146 Query: 138 caccggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggt 197 |||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||||||| Sbjct: 147 caccggtcacctctccccctacacctacaccctcaggaggacgggcgctgaagatgtggt 206 Query: 198 gttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacct 257 | |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 207 gctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacct 266 Query: 258 gggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 ||||| || || || |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 267 tggtgcctcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggt 326 Query: 318 cgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtgatcgtggg 377 |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct: 327 cgggccagaggtgagcaagtacagcgtcggcgacgtggtcggcgttggggtgatcgtcgg 386 Query: 378 gtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagat 437 |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 387 gtgctgccgcgactgcaggccgtgcaaggccaacgttgagcagtactgcaacaagaagat 446 Query: 438 ctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgc 497 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 447 ctggtcgtacaacgacgtctacaccgacggcaagcccacgcagggcggcttcgcctccgc 506 Query: 498 catggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 507 catggtcgtcgaccagaagttcgtggtgaagatcccggcggggctggcgccgga 560
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 599 bits (302), Expect = e-168 Identities = 431/474 (90%) Strand = Plus / Plus Query: 78 gagaatgggcagcgtcgatgcctccgagacgacagtcaccgggtgggccgccagggacgc 137 ||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 87 gagaatgggcagcgtggacgcctccgagaagacgatcaccgggtgggccgccagggacac 146 Query: 138 caccggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggt 197 |||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||||||| Sbjct: 147 caccggtcacctctccccctacacctacaccctcaggaggacgggcgctgaagatgtggt 206 Query: 198 gttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacct 257 | |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 207 gctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacct 266 Query: 258 gggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 ||||| || || || |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 267 tggtgcctcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggt 326 Query: 318 cgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtgatcgtggg 377 |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct: 327 cgggccagaggtgagcaagtacagcgtcggcgacgtggtcggcgttggggtgatcgtcgg 386 Query: 378 gtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagat 437 |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 387 gtgctgccgcgactgcaggccgtgcaaggccaacgttgagcagtactgcaacaagaagat 446 Query: 438 ctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgc 497 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 447 ctggtcgtacaacgacgtctacaccgacggcaagcccacgcagggcggcttcgcctccgc 506 Query: 498 catggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 507 catggtcgtcgaccagaagttcgtggtgaagatcccggcggggctggcgccgga 560
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 583 bits (294), Expect = e-163 Identities = 429/474 (90%) Strand = Plus / Plus Query: 78 gagaatgggcagcgtcgatgcctccgagacgacagtcaccgggtgggccgccagggacgc 137 |||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 77 gagaatgggcagcgtcgacgcctccgagaagacgatcaccggctgggccgccagggacgc 136 Query: 138 caccggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggt 197 |||||||||||||||||| ||||| |||| |||||||| || ||| ||||||||||||| Sbjct: 137 caccggccacctctccccgtacacgtacaacctcaggaggacgggcgctgaagatgtggt 196 Query: 198 gttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacct 257 | |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 197 gctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacct 256 Query: 258 gggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 |||||||| || || |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 257 tggtgcttcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggt 316 Query: 318 cgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtgatcgtggg 377 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || Sbjct: 317 cgggccggaggtgagcaagtacagcgtcggcgatgtggtcggcgtgggggtgatcgttgg 376 Query: 378 gtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagat 437 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 377 gtgctgccgcgactgccggccgtgcaaggccaacgttgagcagtactgcaacaagaagat 436 Query: 438 ctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgc 497 |||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | | Sbjct: 437 ctggtcgtacaacgacgtctacaccgacggaaagcccacgcagggcggcttcgctggctc 496 Query: 498 catggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||| ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 497 catggtcgtcgaccagaagttcgtggtgaagatcccagcggggctagcgccgga 550
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1387 Score = 482 bits (243), Expect = e-133 Identities = 399/451 (88%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 158 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 217 Query: 161 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 220 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 218 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 277 Query: 221 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 280 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 278 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 337 Query: 281 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 340 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 338 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 397 Query: 341 gcgtcggcgacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 400 ||| ||||||||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 398 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 457 Query: 401 gcaaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctaca 460 ||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 458 gcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctaca 517 Query: 461 ccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcg 520 |||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 518 ccgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttg 577 Query: 521 tggtgaagatccccgccgggcttgcgccgga 551 ||||||||||||| || ||||| |||||||| Sbjct: 578 tggtgaagatcccggcggggctagcgccgga 608
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA Length = 1396 Score = 482 bits (243), Expect = e-133 Identities = 399/451 (88%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 152 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 211 Query: 161 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 220 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 212 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 271 Query: 221 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 280 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 272 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 331 Query: 281 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 340 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 332 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 391 Query: 341 gcgtcggcgacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 400 ||| ||||||||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 392 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 451 Query: 401 gcaaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctaca 460 ||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 452 gcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctaca 511 Query: 461 ccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcg 520 |||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 512 ccgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttg 571 Query: 521 tggtgaagatccccgccgggcttgcgccgga 551 ||||||||||||| || ||||| |||||||| Sbjct: 572 tggtgaagatcccggcggggctagcgccgga 602
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full insert sequence Length = 1376 Score = 482 bits (243), Expect = e-133 Identities = 399/451 (88%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 151 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 210 Query: 161 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 220 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 211 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 270 Query: 221 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 280 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 271 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 330 Query: 281 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 340 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 331 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 390 Query: 341 gcgtcggcgacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 400 ||| ||||||||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 391 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 450 Query: 401 gcaaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctaca 460 ||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 451 gcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctaca 510 Query: 461 ccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcg 520 |||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 511 ccgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttg 570 Query: 521 tggtgaagatccccgccgggcttgcgccgga 551 ||||||||||||| || ||||| |||||||| Sbjct: 571 tggtgaagatcccggcggggctagcgccgga 601
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full insert sequence Length = 1396 Score = 482 bits (243), Expect = e-133 Identities = 399/451 (88%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 152 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 211 Query: 161 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 220 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 212 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 271 Query: 221 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 280 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 272 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 331 Query: 281 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 340 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 332 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 391 Query: 341 gcgtcggcgacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 400 ||| ||||||||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 392 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 451 Query: 401 gcaaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctaca 460 ||||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 452 gcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctaca 511 Query: 461 ccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcg 520 |||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 512 ccgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttg 571 Query: 521 tggtgaagatccccgccgggcttgcgccgga 551 ||||||||||||| || ||||| |||||||| Sbjct: 572 tggtgaagatcccggcggggctagcgccgga 602
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 470 bits (237), Expect = e-129 Identities = 372/417 (89%) Strand = Plus / Plus Query: 117 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 176 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219 Query: 177 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 236 ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| Sbjct: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279 Query: 237 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 296 |||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339 Query: 297 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 356 ||| ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||| Sbjct: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399 Query: 357 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 416 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| || Sbjct: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459 Query: 417 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 476 ||||||||||||||||||||||||||| ||||||||||||||||| || || |||| || Sbjct: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519 Query: 477 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccc 533 |||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatccc 576
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 470 bits (237), Expect = e-129 Identities = 372/417 (89%) Strand = Plus / Plus Query: 117 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 176 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 105 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 164 Query: 177 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 236 ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| Sbjct: 165 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 224 Query: 237 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 296 |||||||| |||||| |||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 225 ccaccaggcaaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 284 Query: 297 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 356 ||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| Sbjct: 285 ggtcggcgaggtggtggaggtcgggcccgaggtggccaagtacggcgtcggcgacgtggt 344 Query: 357 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 416 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| || Sbjct: 345 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 404 Query: 417 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 476 ||||||||||||||||||||||||||| ||||||||||||||||| || || |||| || Sbjct: 405 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 464 Query: 477 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccc 533 |||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 465 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatccc 521
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 442 bits (223), Expect = e-121 Identities = 382/435 (87%) Strand = Plus / Plus Query: 117 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 176 ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| Sbjct: 216 cgggtgggccgccagggacgccaccggacacctcgccccctacacctacaccctcaggag 275 Query: 177 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 236 ||||||||||||||||||||| ||||||| ||||| || || |||||||| ||||| Sbjct: 276 cacaggccctgaagatgtggtggtgaaggtgctctactgtgggatctgccacacagacat 335 Query: 237 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 296 |||||||| ||||||| |||| || ||||| ||||| ||||||||||| ||||| || || Sbjct: 336 ccaccaggccaagaaccacctcggggcttcaaagtaccccatggtccctgggcacgaagt 395 Query: 297 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 356 ||| || ||||||||||| |||||||| || |||| ||||||| |||||||||||||||| Sbjct: 396 ggtcggtgaggtggtggaagtcgggcccgaagtgaccaagtacggcgtcggcgacgtggt 455 Query: 357 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 416 ||||| ||||||||||| |||||||||||||| ||| || |||||||| ||||| || Sbjct: 456 aggcgtcggggtgatcgtcgggtgctgccgcgagtgcaaaccctgcaaggccaacgttga 515 Query: 417 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 476 ||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| || Sbjct: 516 gcagtactgcaacaagaagatctggtcctacaacgatgtctacactgacggccggcccac 575 Query: 477 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 536 ||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||| || Sbjct: 576 gcagggcggcttcgcctccaccatggtcgtcgaccagaagtttgtgatgaagatcccggc 635 Query: 537 cgggcttgcgccgga 551 || || |||||||| Sbjct: 636 gggtctggcgccgga 650
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 389 bits (196), Expect = e-105 Identities = 316/356 (88%) Strand = Plus / Plus Query: 178 acaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacatc 237 ||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||| Sbjct: 222 acaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacatc 281 Query: 238 caccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggtg 297 ||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||| Sbjct: 282 caccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggtg 341 Query: 298 gttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggtc 357 || ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| Sbjct: 342 gtcggcgaggtggtggaggtcgggcccgaggtggccaagtacggcgtcggcgacgtggta 401 Query: 358 ggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcgag 417 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||| Sbjct: 402 ggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgag 461 Query: 418 cagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgacg 477 |||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||| Sbjct: 462 cagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccacg 521 Query: 478 cagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccc 533 ||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 522 cagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatccc 577 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 117 cgggtgggccgccagggacgccaccgg 143 ||||||||||||||||||||||||||| Sbjct: 161 cgggtgggccgccagggacgccaccgg 187
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full insert sequence Length = 1103 Score = 375 bits (189), Expect = e-100 Identities = 294/329 (89%) Strand = Plus / Plus Query: 223 tgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtc 282 ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||||| Sbjct: 17 tgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtc 76 Query: 283 ccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgc 342 || || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| || Sbjct: 77 cctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagc 136 Query: 343 gtcggcgacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgc 402 | ||||||||| |||||||| || || ||||| || ||||||||||| |||| |||||| Sbjct: 137 gccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgc 196 Query: 403 aaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacacc 462 ||||| || || ||||||||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 197 aaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacacc 256 Query: 463 gacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtg 522 |||||| |||| || |||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 257 gacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtg 316 Query: 523 gtgaagatccccgccgggcttgcgccgga 551 ||||||||||| || ||||| |||||||| Sbjct: 317 gtgaagatcccggcggggctagcgccgga 345
>gb|DQ234272.1| Oryza sativa (indica cultivar-group) cinnamyl-alcohol dehydrogenase (GH2) gene, complete cds Length = 4320 Score = 272 bits (137), Expect = 1e-69 Identities = 206/229 (89%) Strand = Plus / Plus Query: 289 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 348 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 2075 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 2134 Query: 349 gacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcg 408 ||||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 2135 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggcc 2194 Query: 409 aacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggc 468 || || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 2195 aatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggc 2254 Query: 469 aggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagt 517 |||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2255 cggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 2303 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 353 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 412 Query: 161 catacaccctcagg 174 |||||||||||| Sbjct: 413 actacaccctcagg 426 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 171 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 230 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 1329 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 1388 Query: 231 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 284 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1389 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 1442 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 520 gtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||||| || ||||| |||||||| Sbjct: 3347 gtggtgaagatcccggcggggctagcgccgga 3378
>tpg|BK003969.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cinnamyl alcohol dehydrogenase (CAD2) gene, complete cds Length = 4183 Score = 272 bits (137), Expect = 1e-69 Identities = 206/229 (89%) Strand = Plus / Plus Query: 289 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 348 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 1916 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 1975 Query: 349 gacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcg 408 ||||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 1976 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggcc 2035 Query: 409 aacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggc 468 || || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 2036 aatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggc 2095 Query: 469 aggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagt 517 |||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2096 cggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 2144 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 275 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 334 Query: 161 catacaccctcagg 174 |||||||||||| Sbjct: 335 actacaccctcagg 348 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 171 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 230 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 1170 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 1229 Query: 231 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 284 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1230 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 1283 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 520 gtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||||| || ||||| |||||||| Sbjct: 3189 gtggtgaagatcccggcggggctagcgccgga 3220
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 272 bits (137), Expect = 1e-69 Identities = 206/229 (89%) Strand = Plus / Minus Query: 289 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 348 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 4872244 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 4872185 Query: 349 gacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcg 408 ||||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 4872184 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggcc 4872125 Query: 409 aacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggc 468 || || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 4872124 aatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggc 4872065 Query: 469 aggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagt 517 |||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 4872064 cggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 4872016 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 4873885 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 4873826 Query: 161 catacaccctcagg 174 |||||||||||| Sbjct: 4873825 actacaccctcagg 4873812 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 171 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 230 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 4872990 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 4872931 Query: 231 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 284 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 4872930 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 4872877 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 520 gtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||||| || ||||| |||||||| Sbjct: 4870971 gtggtgaagatcccggcggggctagcgccgga 4870940
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 272 bits (137), Expect = 1e-69 Identities = 206/229 (89%) Strand = Plus / Minus Query: 289 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 348 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 114403 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 114344 Query: 349 gacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcg 408 ||||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 114343 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggcc 114284 Query: 409 aacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggc 468 || || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 114283 aatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggc 114224 Query: 469 aggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagt 517 |||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 114223 cggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 114175 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 116044 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 115985 Query: 161 catacaccctcagg 174 |||||||||||| Sbjct: 115984 actacaccctcagg 115971 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 171 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 230 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 115149 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 115090 Query: 231 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 284 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 115089 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 115036 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 520 gtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||||| || ||||| |||||||| Sbjct: 113130 gtggtgaagatcccggcggggctagcgccgga 113099
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 272 bits (137), Expect = 1e-69 Identities = 206/229 (89%) Strand = Plus / Minus Query: 289 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 348 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 16983 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 16924 Query: 349 gacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcg 408 ||||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 16923 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggcc 16864 Query: 409 aacgtcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggc 468 || || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 16863 aatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggc 16804 Query: 469 aggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagt 517 |||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 16803 cggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 16755 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 101 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 160 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 18624 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 18565 Query: 161 catacaccctcagg 174 |||||||||||| Sbjct: 18564 actacaccctcagg 18551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 171 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 230 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 17729 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 17670 Query: 231 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 284 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 17669 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 17616 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 520 gtggtgaagatccccgccgggcttgcgccgga 551 |||||||||||||| || ||||| |||||||| Sbjct: 15710 gtggtgaagatcccggcggggctagcgccgga 15679
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full insert sequence Length = 1091 Score = 216 bits (109), Expect = 6e-53 Identities = 175/197 (88%) Strand = Plus / Plus Query: 355 gtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtc 414 |||||||| || || ||||| || ||||||||||| |||| ||||||||||| || || Sbjct: 551 gtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtg 610 Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| |||| Sbjct: 611 gagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggcca 670 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatcccc 534 || |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 671 acccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccg 730 Query: 535 gccgggcttgcgccgga 551 || ||||| |||||||| Sbjct: 731 gcggggctagcgccgga 747
>emb|AJ811963.1| Linum album mRNA for cinnamyl-alcohol dehydrogenase (cad gene) Length = 1291 Score = 99.6 bits (50), Expect = 9e-18 Identities = 101/118 (85%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggc 472 ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | || Sbjct: 422 tcgagcagtactgcaacaagaagatatggtcctacaacgacgtctacacggacgggaagc 481 Query: 473 cgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 | || || ||||| |||||| | ||||| ||||| || ||||||||||||||||| Sbjct: 482 ccacccaaggcgggttcgccgagtcgatggtggtcgaccaaaagttcgtggtgaagat 539 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 213 ctgcggcatttgccacacggacatccaccaggtcaagaacgacctggg 260 |||||| || ||||| || || ||||||||||| |||||||||||||| Sbjct: 222 ctgcggaatctgccatacagatatccaccaggtgaagaacgacctggg 269
>gb|DQ487210.1| Linum usitatissimum cultivar Nike putative cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1535 Score = 97.6 bits (49), Expect = 4e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggc 472 |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct: 411 tcgagcagtactgcaacaagaaaatctggtcctacaacgacgtctacaccgacgggaacc 470 Query: 473 cgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatcc 532 | || || || ||||||||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 471 caactcaaggaggcttcgccgagtcgatggttgtcgaccagaagtttgtagtgaagatcc 530 Query: 533 c 533 | Sbjct: 531 c 531
>gb|AY837831.1| Linum usitatissimum putative cinnamyl alcohol dehydrogenase mRNA, partial cds Length = 816 Score = 97.6 bits (49), Expect = 4e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggc 472 |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct: 245 tcgagcagtactgcaacaagaaaatctggtcctacaacgacgtctacaccgacgggaacc 304 Query: 473 cgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatcc 532 | || || || ||||||||| | ||||| ||||| |||||||| || |||||||||| Sbjct: 305 caactcaaggaggcttcgccgagtcgatggttgtcgaccagaagtttgtagtgaagatcc 364 Query: 533 c 533 | Sbjct: 365 c 365
>dbj|D13991.1|AAICAD Aralia cordata cadac1 mRNA for cinnamyl alcohol dehydrogenase, complete cds Length = 1462 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 ||||||||||||||||||||||||||||| ||||| || ||||||||||| |||| ||| Sbjct: 451 gagcagtactgcaacaagaagatctggtcctacaatgatgtctacaccgatggcaagccc 510 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || |||||| || ||||||||||||||| ||||| || |||||||| Sbjct: 511 acccaaggaggcttctccggtcacatggtcgtcgatcaaaagtttgttgtgaagat 566 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 148 ctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtgttgaaggtt 207 ||||| || ||||| ||||| |||||| |||||||||| |||||||| | | ||| || Sbjct: 184 ctctcaccatacacctacactctcagggaaacaggcccagaagatgtttttatcaagatt 243 Query: 208 aaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctgggtgcttcc 267 | || || || |||||||| || || || |||||| ||||||| || || || |||||| Sbjct: 244 atttattgtgggatttgccatactgatattcaccagatcaagaatgatcttggagcttcc 303 Query: 268 aagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 317 || || || ||||| ||||||||||| |||||||| ||||| |||||||| Sbjct: 304 aattaccctatggttccagggcatgaagtggttggtgaggttgtggaggt 353
>dbj|D86590.1| Zinnia elegans mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 1106 Score = 83.8 bits (42), Expect = 6e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 389 actgccggccgtgcaaggcgaacgtcgagcagtactgcaacaagaagatctggtcgtaca 448 ||||||| || ||||| || |||| ||||||||||||||||| ||||||||| | |||| Sbjct: 195 actgccgtccttgcaacgccgacgtggagcagtactgcaacaaaaagatctggacctaca 254 Query: 449 acgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcg 508 |||| |||||||||||||||| ||| || || || || ||||| | ||||||| ||| Sbjct: 255 acgatgtctacaccgacggcaagcccactcaaggggggttcgcgggctccatggtggtcc 314 Query: 509 atcagaagttcgtggtgaagat 530 | || ||||| ||||||||||| Sbjct: 315 accaaaagtttgtggtgaagat 336 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 271 tatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtcgggccgga 326 |||||||||||||| || ||||| ||||| || |||||||||||||| || ||||| Sbjct: 77 tatcccatggtccctggacatgaagtggtaggtgaggtggtggaggtgggaccgga 132
>gb|AY879285.1| Ocimum basilicum cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1074 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggca 469 ||||||| ||||| ||||||||||| ||||||||||||||||| ||| |||| |||| Sbjct: 329 tcgagcaatactgtaacaagaagatttggtcgtacaacgacgtttaccccgatggca 385 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 220 atttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatg 279 ||||||||||| || |||||||| | ||||| ||||| || ||||| ||||||||| Sbjct: 136 atttgccacactgatgtccaccagattaagaatgaccttggcatgtccaactatcccatg 195 Query: 280 gtcccagggcatgaggtggttggcgaggtggtggaggt 317 || ||||||||||| ||||| || |||||||| ||||| Sbjct: 196 gttccagggcatgaagtggtaggtgaggtggttgaggt 233
>gb|DQ178938.1| Cucumis sativus cinnamyl alcohol dehydrogenase-like protein mRNA, partial cds Length = 420 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 454 gtctacaccgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcag 513 ||||| ||||||||| | || ||||| |||||||||||| |||| ||||||||||| || Sbjct: 37 gtctataccgacggccgccctacgcaaggcggcttcgccaccgctatggtcgtcgaccaa 96 Query: 514 aagttcgtggtgaa 527 | ||| |||||||| Sbjct: 97 aggtttgtggtgaa 110
>gb|AY596170.1| Populus tomentosa cinnamyl alcohol dehydrogenases gene, complete cds Length = 2125 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 461 ||||| |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 667 gagcaatactgcaacaagaaaatctggtcttacaatgatgtctacac 713
>gb|AY504425.1| Corchorus capsularis cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 427 aacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggc 486 ||||||||||| ||||| |||| || |||||||| || |||| || || || || ||| Sbjct: 355 aacaagaagatttggtcttacagtgatgtctacactgatggcaaacccactcaaggtggc 414 Query: 487 ttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccc 533 || || || |||||||||||||||| ||||| |||||||| ||||| Sbjct: 415 tttgctgcctccatggtcgtcgatcaaaagtttgtggtgaaaatccc 461
>gb|AY479972.1| Populus tomentosa cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1309 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 461 ||||| |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 361 gagcaatactgcaacaagaaaatctggtcttacaatgatgtctacac 407
>emb|Z19568.1|PDCIALDHA P.deltoides encoding cinnamyl alcohol dehydrogenase Length = 1305 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 461 ||||| |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 358 gagcaatactgcaacaagaaaatctggtcttacaatgatgtctacac 404
>emb|AJ295837.1|PTR295837 Populus balsamifera subsp. trichocarpa cad gene for cinnamyl alcohol dehydrogenase, exons 1-5 Length = 3065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 461 ||||| |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 1513 gagcaatactgcaacaagaaaatctggtcttacaatgatgtctacac 1559
>gb|AF217957.1|AF217957 Populus tremuloides cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1395 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 461 ||||| |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 371 gagcaatactgcaacaagaaaatctggtcttacaatgatgtctacac 417
>gb|AY769938.1| Acacia mangium x Acacia auriculiformis cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1346 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 265 tccaagtatcccatggtcccagggcatgaggtggttgg 302 ||||| ||||||||||| || ||||||||||||||||| Sbjct: 246 tccaattatcccatggttcctgggcatgaggtggttgg 283
>emb|Z19573.1|MSCIALDHA M.sativa encoding cinnamyl alcohol dehydrogenase Length = 1321 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacgg 467 ||||| ||||| ||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 414 gagcaatactgtaacaagaagatctggtcttacaatgatgtttacactgacgg 466
>gb|L46857.1|ALFCAD1B Medicago sativa cinnamyl-alcohol dehydrogenase (cad1) mRNA, partial cds Length = 1201 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacgg 467 ||||| ||||| ||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 267 gagcaatactgtaacaagaagatctggtcttacaatgatgtttacactgacgg 319
>gb|AF083332.1|AF083332 Medicago sativa cinnamyl-alcohol dehydrogenase (MsaCad2) mRNA, complete cds Length = 1324 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacgg 467 ||||| ||||| ||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 390 gagcaatactgtaacaagaagatctggtcttacaatgatgtttacactgacgg 442
>ref|NM_112832.2| Arabidopsis thaliana CAD4 (CINNAMYL ALCOHOL DEHYDROGENASE 4); cinnamyl-alcohol dehydrogenase AT3G19450 (CAD4) mRNA, complete cds Length = 1403 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 430 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 489 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 490 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 545
>gb|AY302081.1| Arabidopsis thaliana cinnamyl alcohol dehydrogenase (CAD4) mRNA, complete cds Length = 1098 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 334 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 393 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 394 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 449
>gb|AY063076.1| Arabidopsis thaliana putative cinnamyl alcohol dehydrogenase (At3g19450) mRNA, complete cds Length = 1129 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 334 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 393 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 394 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 449
>gb|AF370261.1| Arabidopsis thaliana putative cinnamyl alcohol dehydrogenase (At3g19450) mRNA, complete cds Length = 1410 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 430 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 489 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 490 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 545
>gb|AY042841.1| Arabidopsis thaliana cinnamyl alcohol dehydrogenase 2 (MLD14.19) mRNA, partial cds Length = 736 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 430 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 489 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 490 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 545
>gb|AY088220.1| Arabidopsis thaliana clone 4357 mRNA, complete sequence Length = 1389 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 426 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 485 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| ||||| ||||||||||| Sbjct: 486 actcaaggtggcttcgccgacaccatgatcgtcaatcaaaagtttgtggtgaagat 541
>gb|AE009336.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 106 of 187 of the complete sequence Length = 11546 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 453 cgtctacaccgacggcaggccga 475 ||||||||||||||||||||||| Sbjct: 4120 cgtctacaccgacggcaggccga 4098
>gb|AE008279.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 83 of 187 of the complete sequence Length = 13971 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 cgtctacaccgacggcaggccga 475 ||||||||||||||||||||||| Sbjct: 5786 cgtctacaccgacggcaggccga 5808
>gb|AF294793.1|AF294793 Eucalyptus saligna cinnamyl alcohol dehydrogenase (cad) gene, complete cds Length = 2259 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggca 469 ||||| ||||||||||||||||| ||| ||||| ||||| |||||||| |||| Sbjct: 629 gagcaatactgcaacaagaagatttggaattacaatgacgtgtacaccgatggca 683
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 286 gggcatgaggtggttggcgaggtggtggaggtcgg 320 ||||| |||||||| ||||||||||||||| |||| Sbjct: 3214642 gggcacgaggtggtgggcgaggtggtggagatcgg 3214608
>dbj|D16624.1|EGCCAD Eucalyptus botryoides Cad1:Eb:1 gene for cinnamyl alcohol dehydrogenase, complete cds Length = 3288 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggca 469 ||||| ||||||||||||||||| ||| ||||| ||||| |||||||| |||| Sbjct: 1160 gagcaatactgcaacaagaagatttggaattacaatgacgtgtacaccgatggca 1214
>gb|AY374447.1| Zea mays fatty aldehyde dehydrogenase 1 gene, complete cds Length = 4739 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 aggtggtggaggtcgggccggaggtg 330 |||||||||||| ||||||||||||| Sbjct: 2223 aggtggtggagggcgggccggaggtg 2248
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 211 tactgcggcatttgccacacggacatccaccagg 244 ||||||||| | |||||| ||||||||||||||| Sbjct: 1337168 tactgcggcgtctgccactcggacatccaccagg 1337135 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 taccgcgtcggcgacgtggtc 357 ||||||||||||||||||||| Sbjct: 2210613 taccgcgtcggcgacgtggtc 2210593 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gtcggcgtgggggtgatcgt 374 |||||||||||||||||||| Sbjct: 3925105 gtcggcgtgggggtgatcgt 3925086
>gb|AY107915.1| Zea mays PCO083188 mRNA sequence Length = 1182 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 aggtggtggaggtcgggccggaggtg 330 |||||||||||| ||||||||||||| Sbjct: 3 aggtggtggagggcgggccggaggtg 28
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tgaagatgtggtgttgaaggt 206 ||||||||||||||||||||| Sbjct: 970233 tgaagatgtggtgttgaaggt 970253
>ref|XM_571622.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF03260) partial mRNA Length = 3034 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 tgaagatgtggtgttgaaggt 206 ||||||||||||||||||||| Sbjct: 2196 tgaagatgtggtgttgaaggt 2176
>ref|XM_807840.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506223.30) partial mRNA Length = 2427 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 tcggcgacgtggtcggcgtgg 364 ||||||||||||||||||||| Sbjct: 326 tcggcgacgtggtcggcgtgg 346
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 atgaggtggttggcgaggtgg 310 ||||||||||||||||||||| Sbjct: 48904 atgaggtggttggcgaggtgg 48884
>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence Length = 215251 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 atgaggtggttggcgaggtgg 310 ||||||||||||||||||||| Sbjct: 11915 atgaggtggttggcgaggtgg 11935
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 aaatactgcggcatttgccacacggacat 236 |||||||||||||| |||||| ||||||| Sbjct: 157754 aaatactgcggcatctgccactcggacat 157726
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 ttcgtggtgaagatccccgcc 537 ||||||||||||||||||||| Sbjct: 5463576 ttcgtggtgaagatccccgcc 5463556 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gcgtcggcgacgtggtcggc 360 |||||||||||||||||||| Sbjct: 1719719 gcgtcggcgacgtggtcggc 1719738
>gb|AF207554.1| Brassica oleracea cinnamyl alcohol dehydrogenase (CADa) gene, partial cds Length = 831 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggca 469 |||| |||||||| ||||||| |||||| || || ||||||||||||||||||| Sbjct: 86 tcgaacagtactgtaacaagagaatctggagttataatgacgtctacaccgacggca 142
>gb|AF207553.1| Brassica napus cinnamyl alcohol dehydrogenase (CADa-2) gene, partial cds Length = 821 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 413 tcgagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggca 469 |||| |||||||| ||||||| |||||| || || ||||||||||||||||||| Sbjct: 86 tcgaacagtactgtaacaagagaatctggagttataatgacgtctacaccgacggca 142
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 cgcgtcggcgacgtggtcggcgtgg 364 ||||||||||||| ||||||||||| Sbjct: 233006 cgcgtcggcgacgcggtcggcgtgg 232982
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tgaagatgtggtgttgaaggt 206 ||||||||||||||||||||| Sbjct: 18014 tgaagatgtggtgttgaaggt 18034
>gb|AC119202.6| Mus musculus chromosome 8, clone RP24-185N3, complete sequence Length = 159765 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tgaagatgtggtgttgaaggt 206 ||||||||||||||||||||| Sbjct: 123652 tgaagatgtggtgttgaaggt 123672
>ref|XM_588261.2| PREDICTED: Bos taurus similar to regulating synaptic membrane exocytosis 4 (LOC539592), mRNA Length = 1294 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 1074 acatccaccaggtcaagaac 1055
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caaggcgaacgtcgagcagt 421 |||||||||||||||||||| Sbjct: 768307 caaggcgaacgtcgagcagt 768288
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ggcgaggtggtggaggtcgg 320 |||||||||||||||||||| Sbjct: 38505 ggcgaggtggtggaggtcgg 38486
>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence Length = 180633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cctctccccctacacataca 166 |||||||||||||||||||| Sbjct: 81024 cctctccccctacacataca 81005
>gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 monooxygenase (mnp1), type I polyketide synthase (mnp2), and cytochrome P450 monooxygenase (mnp3) genes, complete cds Length = 13513 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cgtcggcgacgtggtcggcg 361 |||||||||||||||||||| Sbjct: 12077 cgtcggcgacgtggtcggcg 12096
>ref|XM_743486.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g02580) partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 actgcggcatttgccacacggacatcca 239 ||||||||||| |||||| ||||||||| Sbjct: 335 actgcggcattggccacaaggacatcca 308
>emb|AL118522.32|HSDJ781B1 Human DNA sequence from clone RP4-781B1 on chromosome 20 Contains the 5' end of a novel gene, the KCNK15 gene for potassium channel subfamily K member 15, a novel gene, the RIMS4 gene for regulating synaptic membrane exocytosis 4 and three CpG islands, complete sequence Length = 107109 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 18024 acatccaccaggtcaagaac 18043
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caaggcgaacgtcgagcagt 421 |||||||||||||||||||| Sbjct: 2088586 caaggcgaacgtcgagcagt 2088567
>gb|AC123900.2| Homo sapiens chromosome 3 clone RP11-640D6, complete sequence Length = 166485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 agtcgctctttccaccaaat 48 |||||||||||||||||||| Sbjct: 126594 agtcgctctttccaccaaat 126575
>dbj|AK124626.1| Homo sapiens cDNA FLJ42635 fis, clone BRACE3022769 Length = 4595 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 519 acatccaccaggtcaagaac 500
>dbj|AK126807.1| Homo sapiens cDNA FLJ44857 fis, clone BRACE3052595, moderately similar to Rattus norvegicus Nim3 protein (Nim3) Length = 5104 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 1028 acatccaccaggtcaagaac 1009
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 121 tgggccgccagggacgccaccggccacctctccccctaca 160 ||||| || ||||||||| |||| ||||||||||| |||| Sbjct: 49 tgggctgcgagggacgcctccggtcacctctccccttaca 88
>gb|AF294352.1| Homo sapiens tandem acid-sensitive potassium channel TASK5 (KCNK15) gene, complete cds Length = 16930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 4498 acatccaccaggtcaagaac 4479
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ggccgccagggacgccaccg 142 |||||||||||||||||||| Sbjct: 1204418 ggccgccagggacgccaccg 1204399
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 5752 acatccaccaggtcaagaac 5771
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caaggcgaacgtcgagcagt 421 |||||||||||||||||||| Sbjct: 1662975 caaggcgaacgtcgagcagt 1662956
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tggtggaggtcgggccggag 327 |||||||||||||||||||| Sbjct: 3805543 tggtggaggtcgggccggag 3805524
>gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O22, complete sequence Length = 209114 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cctctccccctacacataca 166 |||||||||||||||||||| Sbjct: 23714 cctctccccctacacataca 23695
>emb|BX823697.1|CNS0A5GF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1288 Score = 40.1 bits (20), Expect = 7.5 Identities = 92/116 (79%) Strand = Plus / Plus Query: 415 gagcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccg 474 |||||||| || ||||||| |||||| |||||||| ||||||||||| || | || Sbjct: 414 gagcagtattgtaacaagagaatctggagttacaacgatgtctacaccgatggaaaacct 473 Query: 475 acgcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagat 530 || || || ||||||||| | ||||| ||||| |||| |||| ||||||||||| Sbjct: 474 actcaaggtggcttcgccgacaccatgatcgtcaatcaagagtttgtggtgaagat 529
>ref|NM_182970.2| Homo sapiens regulating synaptic membrane exocytosis 4 (RIMS4), mRNA Length = 5136 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 1058 acatccaccaggtcaagaac 1039
>ref|XM_343588.2| PREDICTED: Rattus norvegicus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (predicted) (Ctdsp1_predicted), mRNA Length = 2765 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctctccccctacacatacac 167 |||||||||||||||||||| Sbjct: 2716 ctctccccctacacatacac 2735
>gb|AC108512.4| Homo sapiens BAC clone RP13-549D10 from 2, complete sequence Length = 76170 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 tctccccctacacatacaccctca 172 ||||||||||||||||||| |||| Sbjct: 27172 tctccccctacacatacacgctca 27149
>gb|AC008407.4|AC008407 Homo sapiens chromosome 5 clone CTC-278A2, complete sequence Length = 78849 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cctctccccctacacataca 166 |||||||||||||||||||| Sbjct: 12974 cctctccccctacacataca 12993
>emb|BX648947.1|HSM809098 Homo sapiens mRNA; cDNA DKFZp686D0748 (from clone DKFZp686D0748) Length = 5000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 acatccaccaggtcaagaac 252 |||||||||||||||||||| Sbjct: 898 acatccaccaggtcaagaac 879
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 121 tgggccgccagggacgccaccggccacctctccccctaca 160 ||||| |||||||||| | ||||| |||||||||||||| Sbjct: 256 tgggcggccagggacgactccggcgtcctctccccctaca 295
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caaggcgaacgtcgagcagt 421 |||||||||||||||||||| Sbjct: 980170 caaggcgaacgtcgagcagt 980189
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 cgcgtcggcgacgtggtcggcgtggggg 367 |||||||||| || |||||||||||||| Sbjct: 2330265 cgcgtcggcgccgcggtcggcgtggggg 2330292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,262,292 Number of Sequences: 3902068 Number of extensions: 3262292 Number of successful extensions: 75181 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 74017 Number of HSP's gapped (non-prelim): 1149 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
