Clone Name | bart42e07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_507360.1| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1297 Score = 264 bits (133), Expect = 2e-67 Identities = 288/340 (84%), Gaps = 6/340 (1%) Strand = Plus / Plus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 135 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 192 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 193 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 248 Query: 125 tcagccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaag 184 | |||||||||||||| || ||||||||||| ||||||| || ||||| || ||||||| Sbjct: 249 ttagccccatgtggcctggtgaggcacactcattgaaggtcgaaaaggtactattccaag 308 Query: 185 gcaagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcg 244 | ||||| ||||||||| ||||| |||| | ||||||||||| ||||| |||||||| | Sbjct: 309 gaaagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttg 368 Query: 245 tcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgatta 304 | |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||| Sbjct: 369 tgctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgatta 428 Query: 305 cccaccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 429 cccacctccccctttgctctatcaaagatcccaagaaggt 468
>ref|XM_506281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1346 Score = 264 bits (133), Expect = 2e-67 Identities = 288/340 (84%), Gaps = 6/340 (1%) Strand = Plus / Plus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 136 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 193 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 194 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 249 Query: 125 tcagccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaag 184 | |||||||||||||| || ||||||||||| ||||||| || ||||| || ||||||| Sbjct: 250 ttagccccatgtggcctggtgaggcacactcattgaaggtcgaaaaggtactattccaag 309 Query: 185 gcaagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcg 244 | ||||| ||||||||| ||||| |||| | ||||||||||| ||||| |||||||| | Sbjct: 310 gaaagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttg 369 Query: 245 tcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgatta 304 | |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||| Sbjct: 370 tgctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgatta 429 Query: 305 cccaccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 430 cccacctccccctttgctctatcaaagatcccaagaaggt 469
>dbj|AK099606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E04, full insert sequence Length = 1346 Score = 264 bits (133), Expect = 2e-67 Identities = 288/340 (84%), Gaps = 6/340 (1%) Strand = Plus / Plus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 136 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 193 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 194 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 249 Query: 125 tcagccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaag 184 | |||||||||||||| || ||||||||||| ||||||| || ||||| || ||||||| Sbjct: 250 ttagccccatgtggcctggtgaggcacactcattgaaggtcgaaaaggtactattccaag 309 Query: 185 gcaagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcg 244 | ||||| ||||||||| ||||| |||| | ||||||||||| ||||| |||||||| | Sbjct: 310 gaaagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttg 369 Query: 245 tcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgatta 304 | |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||| Sbjct: 370 tgctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgatta 429 Query: 305 cccaccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 430 cccacctccccctttgctctatcaaagatcccaagaaggt 469
>dbj|AK060916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G07, full insert sequence Length = 1297 Score = 264 bits (133), Expect = 2e-67 Identities = 288/340 (84%), Gaps = 6/340 (1%) Strand = Plus / Plus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 135 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 192 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 193 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 248 Query: 125 tcagccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaag 184 | |||||||||||||| || ||||||||||| ||||||| || ||||| || ||||||| Sbjct: 249 ttagccccatgtggcctggtgaggcacactcattgaaggtcgaaaaggtactattccaag 308 Query: 185 gcaagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcg 244 | ||||| ||||||||| ||||| |||| | ||||||||||| ||||| |||||||| | Sbjct: 309 gaaagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttg 368 Query: 245 tcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgatta 304 | |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||| Sbjct: 369 tgctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgatta 428 Query: 305 cccaccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 429 cccacctccccctttgctctatcaaagatcccaagaaggt 468
>emb|AJ251298.1|OSA251298 Oryza sativa mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1308 Score = 256 bits (129), Expect = 4e-65 Identities = 287/340 (84%), Gaps = 6/340 (1%) Strand = Plus / Plus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 98 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 155 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 156 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 211 Query: 125 tcagccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaag 184 | |||||||||||||| || ||||||||||| ||||||| || ||||| || ||||||| Sbjct: 212 ttagccccatgtggcctggtgaggcacactcattgaaggtcgaaaaggtactattccaag 271 Query: 185 gcaagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcg 244 | ||||| ||||||||| ||||| |||| | ||||||||||| ||||| ||||| || | Sbjct: 272 gaaagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggttcttg 331 Query: 245 tcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgatta 304 | |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||| Sbjct: 332 tgctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgatta 391 Query: 305 cccaccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 392 cccacctccccctttgctctatcaaagatcccaagaaggt 431
>ref|NM_187782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 240 bits (121), Expect = 3e-60 Identities = 284/338 (84%), Gaps = 9/338 (2%) Strand = Plus / Plus Query: 7 atggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcggcg 66 |||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 1 atggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc---- 56 Query: 67 gacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgagatc 126 ||| |||| ||||||||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 57 --cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgagatt 114 Query: 127 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 186 |||||||||||||| | |||||||||| ||||||| || ||||| || |||||||| Sbjct: 115 agccccatgtggcctg---aggcacactcattgaaggtcgaaaaggtactattccaagga 171 Query: 187 aagtcagactaccaagatgtgctggttctccagtcctccacctacgggaaggtgctcgtc 246 ||||| ||||||||| ||||| |||| | ||||||||||| ||||| |||||||| || Sbjct: 172 aagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttgtg 231 Query: 247 ctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgattacc 306 |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||||| Sbjct: 232 ctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgattacc 291 Query: 307 caccttcctctctgctcaatcaaggatccaaagaaggt 344 ||||| || || ||||| ||||| ||||| |||||||| Sbjct: 292 cacctccccctttgctctatcaaagatcccaagaaggt 329
>gb|BT024141.1| Zea mays clone EL01N0442H12 mRNA sequence Length = 1281 Score = 232 bits (117), Expect = 6e-58 Identities = 225/261 (86%) Strand = Plus / Plus Query: 84 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 143 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 100 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 159 Query: 144 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 203 ||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 160 tgaggcgcactctttgaaggtggagaaggtgctgttccaagggaagtcagactaccaaaa 219 Query: 204 tgtgctggttctccagtcctccacctacgggaaggtgctcgtcctggatggggtgatcca 263 || |||| | |||||||| || |||||||||||||||||||| ||||| || || || Sbjct: 220 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtccttgatggagttattca 279 Query: 264 ggtgaccgagcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 323 ||| || ||| |||| ||||| || ||||| |||||||| || ||||| || || ||||| Sbjct: 280 ggttacggagagggatgagtgtgcgtaccaagagatgatcactcacctgcccctttgctc 339 Query: 324 aatcaaggatccaaagaaggt 344 ||||| ||||| |||||||| Sbjct: 340 catcaaagatcccaagaaggt 360 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 7 atggaggccgagacggcggcgaagagggcgcgggagagcg 46 ||||||||||| ||||||| |||||| |||||||||||| Sbjct: 44 atggaggccgatgcggcggccaagaggacgcgggagagcg 83
>gb|AY103592.1| Zea mays PCO075678 mRNA sequence Length = 1471 Score = 216 bits (109), Expect = 4e-53 Identities = 223/261 (85%) Strand = Plus / Plus Query: 84 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 143 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 159 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 218 Query: 144 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 203 ||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 219 tgaggcgcactctttgaaggtggacaaggtgctgttccaagggaagtcagactaccaaag 278 Query: 204 tgtgctggttctccagtcctccacctacgggaaggtgctcgtcctggatggggtgatcca 263 || |||| | |||||||| || |||||||||||||||||||| ||||| || || || Sbjct: 279 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtcctcgatggagttattca 338 Query: 264 ggtgaccgagcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 323 |||||| ||| |||| ||||| || ||||| |||||||| || ||||| || || ||||| Sbjct: 339 ggtgacggagagggatgagtgtgcgtaccaagagatgatcactcacctgcccctttgctc 398 Query: 324 aatcaaggatccaaagaaggt 344 ||||| || || |||||||| Sbjct: 399 catcaaagaccccaagaaggt 419
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 7e-27 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 12669008 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 12668951 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 12668950 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 12668895 Query: 125 tcagccccatgtggcc 140 | |||||||||||||| Sbjct: 12668894 ttagccccatgtggcc 12668879 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 218 agtcctccacctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcggg 277 |||||||||| ||||| |||||||| || |||||||| ||||| ||||| || ||| ||| Sbjct: 12667734 agtcctccacgtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagaggg 12667675 Query: 278 acgagtgcgcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaa 337 | ||||| || ||||| ||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 12667674 atgagtgtgcttaccaagagatgattacccacctccccctttgctctatcaaagatccca 12667615 Query: 338 agaaggt 344 ||||||| Sbjct: 12667614 agaaggt 12667608 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 145 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 204 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 12667895 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 12667836 Query: 205 gtgctggt 212 ||| |||| Sbjct: 12667835 gtgatggt 12667828 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 28832178 gctgcggcggcggcggacgg 28832197
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 129 bits (65), Expect = 7e-27 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 5 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 64 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 43478 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 43421 Query: 65 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 124 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 43420 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 43365 Query: 125 tcagccccatgtggcc 140 | |||||||||||||| Sbjct: 43364 ttagccccatgtggcc 43349 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 218 agtcctccacctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcggg 277 |||||||||| ||||| |||||||| || |||||||| ||||| ||||| || ||| ||| Sbjct: 42204 agtcctccacgtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagaggg 42145 Query: 278 acgagtgcgcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaa 337 | ||||| || ||||| ||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 42144 atgagtgtgcttaccaagagatgattacccacctccccctttgctctatcaaagatccca 42085 Query: 338 agaaggt 344 ||||||| Sbjct: 42084 agaaggt 42078 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 145 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 204 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 42365 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 42306 Query: 205 gtgctggt 212 ||| |||| Sbjct: 42305 gtgatggt 42298
>emb|Y08253.1|DSSS2 D.stramonium mRNA for spermidine synthase 2 Length = 1217 Score = 77.8 bits (39), Expect = 2e-11 Identities = 171/215 (79%) Strand = Plus / Plus Query: 112 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 171 |||||||||||||| |||||| | ||||| || || ||||||||| ||||||| |||||| Sbjct: 129 tggttctccgagattagccccctctggcctggggaagcacactcgttgaaggttgagaag 188 Query: 172 gtcctgttccaaggcaagtcagactaccaagatgtgctggttctccagtcctccacctac 231 | |||| || || ||||| || ||||||||||| ||||| | ||||| | || || Sbjct: 189 atattgtttcaggggaagtctgattaccaagatgtcatggtttttcagtcaacaacttat 248 Query: 232 gggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctac 291 || |||||||| || ||||||| |||||||| | |||||| |||| || || || ||| Sbjct: 249 ggaaaggtgcttgttttggatggtgtgatccaacttaccgagagggatgaatgtgcttac 308 Query: 292 caggagatgattacccaccttcctctctgctcaat 326 || |||||||| || || |||||||| || ||||| Sbjct: 309 caagagatgatcactcatcttcctctttgttcaat 343
>dbj|AB015599.1| Coffea arabica mRNA for spermidine synthase, complete cds Length = 1383 Score = 61.9 bits (31), Expect = 1e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 112 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 171 ||||| || ||||||||||| |||||||| || |||||||||||||| ||||| || ||| Sbjct: 113 tggttttctgagatcagcccaatgtggcctggagaggcacactcgctaaaggtagaaaag 172 Query: 172 gtcctgttccaaggcaagtcagactaccaagatgtgctggttctccagtcctccacctac 231 | || ||||| || || || || ||||| |||| |||| | ||||| || |||||| Sbjct: 173 atactattccagggaaaatctgattaccagaatgtcatggtctttcagtcatcaacctac 232 Query: 232 gggaaggtgct 242 ||||||||||| Sbjct: 233 gggaaggtgct 243
>emb|AM177608.1| Calystegia sepium mRNA for putrescine N-methyltransferase (pmt gene) Length = 1035 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 |||||||| |||||| |||||| |||||||||||||| ||| ||| || ||| | ||| Sbjct: 172 gggtggttttccgagttcagccaaatgtggcccggcgaagcattctcactcaagatagag 231 Query: 169 aaggtcctgttccaaggcaagtcagactaccaagatgt 206 ||| | || |||||||| ||||| || ||||||||||| Sbjct: 232 aagctactattccaaggaaagtctgattaccaagatgt 269
>ref|XM_504715.1| Yarrowia lipolytica CLIB122, YALI0E33143g predicted mRNA Length = 879 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 259 atccaggtgaccgagcgggacgagtgcgcctaccaggagatgatt 303 ||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 187 atccaggccaccgagcgagacgagtacgcctaccaggagatgatt 231
>gb|AF337636.1|AF337636 Rattus norvegicus spermidine synthase mRNA, complete cds Length = 1268 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| |||||| ||||||||| | Sbjct: 237 acctacggcaacgtgctggttctggatggcgtcatccagtgtaccgagagggacgagttc 296 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 297 tcctaccaggagatgat 313
>ref|NM_053464.1| Rattus norvegicus spermidine synthase (Srm), mRNA Length = 1268 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| |||||| ||||||||| | Sbjct: 237 acctacggcaacgtgctggttctggatggcgtcatccagtgtaccgagagggacgagttc 296 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 297 tcctaccaggagatgat 313
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 259 atccaggtgaccgagcgggacgagtgcgcctaccaggagatgatt 303 ||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 3935226 atccaggccaccgagcgagacgagtacgcctaccaggagatgatt 3935182
>gb|AF298195.1|AF298195 Leishmania donovani spermidine synthase gene, complete cds Length = 903 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 131 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgt 178 |||||||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 50 ccatgtggcccggccaggcacaggggctgaaggtggagaaggttctgt 97
>dbj|AB100310.1| Petunia x hybrida spds mRNA for spermidine synthase, complete cds Length = 1249 Score = 54.0 bits (27), Expect = 3e-04 Identities = 168/215 (78%) Strand = Plus / Plus Query: 112 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 171 |||||||| ||||| |||||| | ||||| || || |||||||| |||||||||||||| Sbjct: 154 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggtggagaag 213 Query: 172 gtcctgttccaaggcaagtcagactaccaagatgtgctggttctccagtcctccacctac 231 | |||| || || ||||| || || || |||| ||||| | ||||| || || || Sbjct: 214 attttgtttcaggggaagtctgattatcagaatgtcatggtttttcagtcatcaacttat 273 Query: 232 gggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctac 291 || |||||||| || ||||||| |||||||| | || ||| |||| || || || ||| Sbjct: 274 ggaaaggtgcttgttttggatggtgtgatccaactcactgagagggatgaatgtgcttac 333 Query: 292 caggagatgattacccaccttcctctctgctcaat 326 || ||||||||||| || |||||||| || ||||| Sbjct: 334 caagagatgattactcatcttcctctttgttcaat 368
>ref|XM_883450.1| Leishmania major strain Friedlin spermidine synthase (L3291.03) partial mRNA Length = 903 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 131 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 176 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 50 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 95
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 176 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 14639 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 14594
>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds Length = 1359 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 92 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 151 ||||||| || || ||||| ||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 222 tctccgctgttattcccggctggttttctgagattagcccaatgtggccaggagaggcac 281 Query: 152 actcgctgaaggtggagaaggtcctgttccaaggcaagtcagacta 197 |||| ||||| | |||||| | |||| ||||| ||||| ||||| Sbjct: 282 actccttgaagatagagaagattttgtttcaaggaaagtccgacta 327
>gb|AY646352.1| Cucumis sativus spermidine synthase mRNA, complete cds Length = 1398 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 127 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 186 ||||| |||||||| || ||||| ||||| |||||||||||||||| |||| ||||| Sbjct: 180 agcccaatgtggcctggagaggctcactccttgaaggtggagaaggttttgtttcaaggg 239 Query: 187 aagtc 191 ||||| Sbjct: 240 aagtc 244
>dbj|AB225678.1| Aspergillus oryzae cDNA, contig sequence: AoEST2533 Length = 529 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 271 gagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| |||| | |||||||||||||||| |||||||| Sbjct: 237 gagcgggatgagttctcctaccaggagatgatcacccacct 277
>ref|XM_342423.2| PREDICTED: Rattus norvegicus similar to spermidine synthase (LOC362121), mRNA Length = 918 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||| | || |||||| |||||| ||||||||| | Sbjct: 259 acctacggcaacgtgctggttctggatagcgtcatccagtgtaccgagagggacgagttc 318 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 319 tcctaccaggagatgat 335
>gb|AY705438.1| Silene latifolia spermidine synthase Y gene, partial cds Length = 4133 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 148 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 192 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1615 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1659
>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds Length = 3533 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 148 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 192 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1137 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1181
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 14 ccgagacggcggcgaagagggcgc 37 |||||||||||||||||||||||| Sbjct: 2661789 ccgagacggcggcgaagagggcgc 2661766
>ref|XM_955814.1| Neurospora crassa OR74A SPERMIDINE SYNTHASE (PUTRESCINE AMINOPROPYLTRANSFERASE) (SPDSY) (NCU06727.1) partial mRNA Length = 876 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 193 accgagcgcgatgagttctcctaccaggagatgatcacccacct 236
>ref|XM_327012.1| Neurospora crassa OR74A SPERMIDINE SYNTHASE (PUTRESCINE AMINOPROPYLTRANSFERASE) (SPDSY) (NCU06727.1) partial mRNA Length = 876 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 193 accgagcgcgatgagttctcctaccaggagatgatcacccacct 236
>ref|XM_653199.1| Aspergillus nidulans FGSC A4 spermidine synthase (AN0687.2), mRNA Length = 879 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| || |||| | |||||||||| |||||||||||||| Sbjct: 193 accgagcgtgatgagttctcctaccaggaaatgattacccacct 236
>emb|BX294092.1|NCB11H7 Neurospora crassa DNA linkage group V BAC clone B11H7 Length = 74977 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 53441 accgagcgcgatgagttctcctaccaggagatgatcacccacct 53398
>emb|AJ006414.1|LES6414 Lycopersicon esculentum mRNA for spermidine synthase Length = 1269 Score = 48.1 bits (24), Expect = 0.020 Identities = 120/152 (78%) Strand = Plus / Plus Query: 112 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 171 |||||||| ||||| |||||| | ||||| || || |||||||| ||||||| |||||| Sbjct: 259 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggttgagaag 318 Query: 172 gtcctgttccaaggcaagtcagactaccaagatgtgctggttctccagtcctccacctac 231 | |||| || || ||||| || ||||| |||| ||||| | ||||| || || || Sbjct: 319 atattgtttcaggggaagtctgattaccagaatgtcttggtttttcagtcatcaacttat 378 Query: 232 gggaaggtgctcgtcctggatggggtgatcca 263 ||||||||||| || ||||||| |||||||| Sbjct: 379 gggaaggtgcttgttttggatggtgtgatcca 410
>gb|AF005842.1|AF005842 Rhodobacter sphaeroides C4-dicarboxylate binding-protein precursor (dctP), small integral membrane transport protein (dctQ) and large integral membrane transport protein (dctM) genes, complete cds Length = 3718 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 14 ccgagacggcggcgaagagggcgc 37 |||||||||||||||||||||||| Sbjct: 2223 ccgagacggcggcgaagagggcgc 2200
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 48.1 bits (24), Expect = 0.020 Identities = 54/64 (84%) Strand = Plus / Plus Query: 92 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 151 ||||||| ||||| ||||| ||||| || ||||| ||| | |||||||| || ||||||| Sbjct: 265 tctccgctgtcattcccggctggttttctgagattagctcaatgtggccaggagaggcac 324 Query: 152 actc 155 |||| Sbjct: 325 actc 328
>dbj|AB001598.1| Neurospora crassa gene for spermidine synthase, complete cds Length = 3370 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 1141 accgagcgcgatgagttctcctaccaggagatgatcacccacct 1184
>ref|XM_756872.1| Ustilago maydis 521 hypothetical protein (UM05818.1) partial mRNA Length = 2310 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccaccttcc 314 |||||||| ||||||| ||||||||||||||||| | |||||||| Sbjct: 193 accgagcgcgacgagttttcctaccaggagatgattgctcaccttcc 239
>gb|AF126809.1|AF126809 Nicotiana tabacum cultivar Xanthi putrescine N-methyltransferase (PMT2) gene, complete cds Length = 3091 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 160 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 206 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1545 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1591
>dbj|AB004322.2| Nicotiana sylvestris NsPMT1 gene for putrescine N-methyltransferase, complete cds Length = 2683 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 160 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 206 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1099 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1145
>ref|NM_202171.1| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.2 mRNA, complete cds Length = 1347 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 169 aa 170 || Sbjct: 319 aa 320
>ref|NM_102230.3| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.1 mRNA, complete cds Length = 1359 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 169 aa 170 || Sbjct: 319 aa 320
>ref|XM_468128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 gcggcggcggcggacggagccg 76 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|XM_445476.1| Candida glabrata CBS138, CAGL0D01408g partial mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 271 gagcgggacgagtgcgcctaccaggagatgattaccca 308 ||||| ||||||| | |||||||||||||||| ||||| Sbjct: 199 gagcgtgacgagttctcctaccaggagatgatcaccca 236
>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 Length = 5310 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 atggcgctgcggcggcggcgga 68 |||||||||||||||||||||| Sbjct: 928 atggcgctgcggcggcggcgga 907
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 271 gagcgggacgagtgcgcctaccaggagatgattaccca 308 ||||| ||||||| | |||||||||||||||| ||||| Sbjct: 157981 gagcgtgacgagttctcctaccaggagatgatcaccca 158018
>emb|AJ251296.1|ATH251296 Arabidopsis thaliana mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1218 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 193 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 252 Query: 169 aa 170 || Sbjct: 253 aa 254
>gb|AY093360.1| Arabidopsis thaliana strong similarity to spermidine synthase (At1g23820) mRNA, complete cds Length = 1125 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 136 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 195 Query: 169 aa 170 || Sbjct: 196 aa 197
>gb|AY062593.1| Arabidopsis thaliana Strong similarity to spermidine synthase (At1g23820; F5O8.38) mRNA, complete cds Length = 1258 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 204 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 263 Query: 169 aa 170 || Sbjct: 264 aa 265
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 atggcgctgcggcggcggcgga 68 |||||||||||||||||||||| Sbjct: 24716200 atggcgctgcggcggcggcgga 24716221
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 gcggcggcggcggacggagccg 76 |||||||||||||||||||||| Sbjct: 33241192 gcggcggcggcggacggagccg 33241171
>emb|BX814923.1|CNS0ABBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 168 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 192 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggtcgag 251 Query: 169 aa 170 || Sbjct: 252 aa 253
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 atggcgctgcggcggcggcgga 68 |||||||||||||||||||||| Sbjct: 17001 atggcgctgcggcggcggcgga 17022
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 atggcgctgcggcggcggcgga 68 |||||||||||||||||||||| Sbjct: 88504 atggcgctgcggcggcggcgga 88525
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 gcggcggcggcggacggagccg 76 |||||||||||||||||||||| Sbjct: 70501 gcggcggcggcggacggagccg 70480
>dbj|AK105110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F08, full insert sequence Length = 1775 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 gcggcggcggcggacggagccg 76 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|NM_197876.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027L23.17), mRNA Length = 468 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gatggcgctgcggcggcggcg 66 ||||||||||||||||||||| Sbjct: 316 gatggcgctgcggcggcggcg 336
>ref|XM_514381.1| PREDICTED: Pan troglodytes similar to mannan-binding lectin serine protease 2 isoform 1 precursor; MBL-associated plasma protein of 19 kD; small MBL-associated protein; MBL-associated protein MAp19 (LOC457943), mRNA Length = 2172 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 262 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 306
>gb|BT018573.1| Zea mays clone EL01N0443D05.d mRNA sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 tgcggcggcggcggacggagc 74 ||||||||||||||||||||| Sbjct: 458 tgcggcggcggcggacggagc 438
>gb|BC033106.1| Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:45687 IMAGE:5420683), complete cds Length = 1225 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 246 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 290
>gb|BC000309.2| Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:8422 IMAGE:2820975), complete cds Length = 1259 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 280 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 324
>gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence Length = 1353 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 286 gcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtc 345 ||||| ||||||||||| |||| |||||||| || |||||||| ||| |||||||| Sbjct: 686 gcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggtt 745 Query: 346 ctggt 350 ||||| Sbjct: 746 ctggt 750
>ref|NM_003132.2| Homo sapiens spermidine synthase (SRM), mRNA Length = 1273 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 314 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 358
>ref|XM_390425.1| Gibberella zeae PH-1 chromosome 1 SPEE_NEUCR Spermidine synthase (Putrescine aminopropyltransferase) (SPDSY) (FG10249.1) partial mRNA Length = 885 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacctt 312 |||||||| || |||| | ||||||||||||||||| | |||||| Sbjct: 199 accgagcgtgatgagttctcctaccaggagatgattgctcacctt 243
>gb|AY335900.1| Lycopersicon esculentum putative spermine synthase (SPM1) mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 286 gcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtc 345 ||||| ||||||||||| |||| |||||||| || |||||||| ||| |||||||| Sbjct: 371 gcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggtt 430 Query: 346 ctggt 350 ||||| Sbjct: 431 ctggt 435
>emb|AL109811.40|HSJ635E18 Human DNA sequence from clone RP4-635E18 on chromosome 1p36.11-36.31 Contains the TARDBP gene for TAR DNA binding protein, the MASP2 gene for mannan-binding lectin serine protease 2, the SRM gene for spermidine synthase, the PMSCL2 gene for 100kDa polymyositis/scleroderma autoantigen 2 (FLJ41371, FLJ36636, two novel genes (FLJ30609), the 3' end of the FRAP1 gene for FK506 binding protein 12-rapamycin associated protein 1 and a CpG island, complete sequence Length = 112769 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 55638 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 55594
>emb|Z67748.1|MMSPERSYN M.musculus spermidine synthase gene Length = 3915 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 977 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 1036 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 1037 tcctaccaggagatgat 1053
>gb|BC005566.1| Mus musculus spermidine synthase, mRNA (cDNA clone MGC:11495 IMAGE:3966710), complete cds Length = 1347 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 283 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 342 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 343 tcctaccaggagatgat 359
>emb|CR605847.1| full-length cDNA clone CS0DJ014YF19 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1229 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 287 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 331
>emb|CR604523.1| full-length cDNA clone CS0DC025YK10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1118 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 192 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 236
>emb|CR603559.1| full-length cDNA clone CS0DL010YG18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1226 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 282 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 326
>emb|CR590206.1| full-length cDNA clone CS0DL006YJ07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1245 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 314 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 358
>dbj|AK146395.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I730069K04 product:spermidine synthase, full insert sequence Length = 1278 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 236 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 295 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 296 tcctaccaggagatgat 312
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gatggcgctgcggcggcggcg 66 ||||||||||||||||||||| Sbjct: 67485 gatggcgctgcggcggcggcg 67505
>dbj|AK051101.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030071N02 product:spermidine synthase, full insert sequence Length = 1304 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 275 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 334 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 335 tcctaccaggagatgat 351
>dbj|AK028359.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830422I15 product:spermidine synthase, full insert sequence Length = 1322 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 290 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 349 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 350 tcctaccaggagatgat 366
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gatggcgctgcggcggcggcg 66 ||||||||||||||||||||| Sbjct: 22415462 gatggcgctgcggcggcggcg 22415482
>dbj|AK108462.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D09, full insert sequence Length = 755 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 cctaccaggagatgattacccacct 311 |||||||||||||||| |||||||| Sbjct: 26 cctaccaggagatgatcacccacct 50
>gb|AF043109.1|AF043109 Pisum sativum spermidine synthase 2 (SPDSYN2) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 275 gggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 323 ||||||| || |||||||| || ||||| || || |||||||||||||| Sbjct: 370 gggacgaatgtgcctaccaagaaatgatcactcatcttcctctctgctc 418
>gb|L19311.1|MUSSPSYN Mouse spermidine synthase mRNA, complete cds Length = 1282 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 247 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 306 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 307 tcctaccaggagatgat 323
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gatggcgctgcggcggcggcg 66 ||||||||||||||||||||| Sbjct: 22427530 gatggcgctgcggcggcggcg 22427550
>ref|NM_009272.2| Mus musculus spermidine synthase (Srm), mRNA Length = 1347 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 283 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 342 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 343 tcctaccaggagatgat 359
>emb|AL591032.19| Mouse DNA sequence from clone RP22-211A10 on chromosome 4, complete sequence Length = 205573 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 79443 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 79502 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 79503 tcctaccaggagatgat 79519
>gb|M64231.1|HUMSPERSYN Human spermidine synthase gene, complete cds Length = 7623 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 2050 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 2094
>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete sequence Length = 224344 Score = 42.1 bits (21), Expect = 1.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 226 acctacgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgc 285 |||||||| || ||||| || |||||||| || |||||| || ||| |||| |||| | Sbjct: 12030 acctacggcaacgtgctggttctggatggcgtcatccagtgtactgagagggatgagttc 12089 Query: 286 gcctaccaggagatgat 302 |||||||||||||||| Sbjct: 12090 tcctaccaggagatgat 12106
>gb|M34338.1|HUMSPERSYO Human spermidine synthase mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 277 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 321 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 305 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 349
>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 gagagcgatggcgctgcggcggcggcgg 67 ||||||| ||||| |||||||||||||| Sbjct: 394 gagagcggtggcggtgcggcggcggcgg 421
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 1076 gctgcggcggcggcggacgg 1095
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctctgctcaatcaaggatcc 335 |||||||||||||||||||| Sbjct: 1215535 ctctgctcaatcaaggatcc 1215516
>gb|AY023197.1| Oryza sativa microsatellite MRG5522 containing (GCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 gagagcgatggcgctgcggcggcggcgg 67 ||||||| ||||| |||||||||||||| Sbjct: 86 gagagcggtggcggtgcggcggcggcgg 113
>ref|XM_417130.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase IB (ATPase class I type 8A member 2) (ML-1) (LOC418936), mRNA Length = 8442 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 440 gctgcggcggcggcggacgg 421
>ref|XM_878626.1| PREDICTED: Bos taurus similar to spermidine synthase, transcript variant 3 (LOC505916), mRNA Length = 1354 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gggacgagtgcgcctaccaggagatgat 302 ||||||||| | |||||||||||||||| Sbjct: 311 gggacgagttctcctaccaggagatgat 338
>ref|XM_582280.2| PREDICTED: Bos taurus similar to spermidine synthase, transcript variant 1 (LOC505916), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gggacgagtgcgcctaccaggagatgat 302 ||||||||| | |||||||||||||||| Sbjct: 311 gggacgagttctcctaccaggagatgat 338
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ggcgctgcggcggcggcgga 68 |||||||||||||||||||| Sbjct: 27319 ggcgctgcggcggcggcgga 27338
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 156440 gctgcggcggcggcggacgg 156421
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgatggcgctgcggcggcggcgg 67 |||||||||| ||||||||||||| Sbjct: 30618375 gcgatggcgcggcggcggcggcgg 30618352 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 14308968 cgccgtcatccccgggtggt 14308987
>gb|AC148137.3| Callicebus moloch clone LB5-202I8, complete sequence Length = 150353 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctctgctcaatcaaggatcc 335 |||||||||||||||||||| Sbjct: 136918 ctctgctcaatcaaggatcc 136899
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gcgatggcgctgcggcggcggcgg 67 |||||||||| ||||||||||||| Sbjct: 144017 gcgatggcgcggcggcggcggcgg 144040
>ref|XM_747626.1| Aspergillus fumigatus Af293 spermidine synthase (Afu1g13490) partial mRNA Length = 882 Score = 40.1 bits (20), Expect = 4.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 268 accgagcgggacgagtgcgcctaccaggagatgattacccacct 311 ||||||||||| |||| | | |||||||||||||| || ||||| Sbjct: 193 accgagcgggatgagttctcgtaccaggagatgatcactcacct 236
>emb|CR732816.1| Gallus gallus finished cDNA, clone ChEST742i24 Length = 1113 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtggagaaggtcctgttcc 181 |||||||||||||||||||| Sbjct: 107 ggtggagaaggtcctgttcc 126
>ref|XM_862775.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 6 (LOC612954), mRNA Length = 1720 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862768.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 5 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862760.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 4 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862752.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 3 (LOC612954), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862747.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 2 (LOC612954), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_848628.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 1 (LOC612954), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 63 gcgctgcggcggcggcggac 44
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagccccatgtggcccggcg 145 |||||||||||||||||||| Sbjct: 2971054 cagccccatgtggcccggcg 2971035
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 agacggcggcgaagagggcg 36 |||||||||||||||||||| Sbjct: 101208 agacggcggcgaagagggcg 101227
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 agcaggcggggatctccgcc 99 |||||||||||||||||||| Sbjct: 7105 agcaggcggggatctccgcc 7086
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 agcaggcggggatctccgcc 99 |||||||||||||||||||| Sbjct: 24565 agcaggcggggatctccgcc 24546
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 145649 gctgcggcggcggcggacgg 145668
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 ctaccaggagatgattacccacct 311 ||||||||||||||| |||||||| Sbjct: 1347712 ctaccaggagatgatcacccacct 1347689
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 58197 cgccgtcatccccgggtggt 58216
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 120356 cgccgtcatccccgggtggt 120375
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctctgctcaatcaaggatcc 335 |||||||||||||||||||| Sbjct: 60627 ctctgctcaatcaaggatcc 60608
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgctgcggcggcggcggacg 70 |||||||||||||||||||| Sbjct: 2153677 cgctgcggcggcggcggacg 2153658
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 22824741 gctgcggcggcggcggacgg 22824722
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 1641904 gctgcggcggcggcggacgg 1641885
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgatggcgctgcggcggcggcgg 67 |||||||||| ||||||||||||| Sbjct: 30709797 gcgatggcgcggcggcggcggcgg 30709774 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 14303943 cgccgtcatccccgggtggt 14303962
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 gagagcgatggcgctgcggcggcggcgg 67 ||||||| ||||| |||||||||||||| Sbjct: 8716085 gagagcggtggcggtgcggcggcggcgg 8716058
>emb|BX816927.1|CNS0ABX3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1275 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 109 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggt 164 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| Sbjct: 195 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggt 250
>gb|AC007872.3| The sequence of an Aspergillus parasiticus cosmid containing spermidine synthase, complete sequence Length = 33952 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 ctaccaggagatgattacccacct 311 ||||||||||||||| |||||||| Sbjct: 179 ctaccaggagatgatcacccacct 202
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ggccgagacggcggcgaaga 31 |||||||||||||||||||| Sbjct: 2993916 ggccgagacggcggcgaaga 2993897
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gagaaggtcctgttccaagg 185 |||||||||||||||||||| Sbjct: 31123 gagaaggtcctgttccaagg 31104
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 gagagcgatggcgctgcggcggcggcgg 67 ||||||| ||||| |||||||||||||| Sbjct: 33542 gagagcggtggcggtgcggcggcggcgg 33515
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 98414 gctgcggcggcggcggacgg 98433
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 89864 gctgcggcggcggcggacgg 89883
>dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B13, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>emb|AJ238245.1|TTA238245 Triticum tauschii st2 gene, exons 1-13 Length = 5329 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 gcggcggcggcggacggagccgttgagc 82 ||||||||||||||||||| || ||||| Sbjct: 4885 gcggcggcggcggacggagacggtgagc 4858
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgctgcggcggcggcggac 69 |||||||||||||||||||| Sbjct: 1680 gcgctgcggcggcggcggac 1661
>dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B12, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>gb|AY106782.1| Zea mays PCO117134 mRNA sequence Length = 862 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tgcggcggcggcggacggag 73 |||||||||||||||||||| Sbjct: 304 tgcggcggcggcggacggag 285
>tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx45 gene for class III peroxidase 45 precursor, exons 1-2 Length = 1091 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtcatccccgggtggt 115 |||||||||||||||||||| Sbjct: 968 cgccgtcatccccgggtggt 987
>gb|AC004395.1|AC004395 Emericella nidulans Chromosome VIII Cosmid Clone 30b1, complete sequence Length = 37312 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 ctaccaggagatgattacccacct 311 ||||||||| |||||||||||||| Sbjct: 6892 ctaccaggaaatgattacccacct 6915
>gb|AC005299.1|AC005299 emericella nidulans chromosome viii cosmid 2h2 containing spermidine synthase, complete sequence Length = 40554 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 ctaccaggagatgattacccacct 311 ||||||||| |||||||||||||| Sbjct: 25978 ctaccaggaaatgattacccacct 25955
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 gcggcggcggcggacggagccgtt 78 |||||||||||| ||||||||||| Sbjct: 691 gcggcggcggcgtacggagccgtt 714
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 1639625 gctgcggcggcggcggacgg 1639606
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 22752932 gctgcggcggcggcggacgg 22752913
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctgcggcggcggcggacgg 71 |||||||||||||||||||| Sbjct: 132103 gctgcggcggcggcggacgg 132122
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctctgctcaatcaaggatcc 335 |||||||||||||||||||| Sbjct: 1202855 ctctgctcaatcaaggatcc 1202836
>gb|AY050641.1| Aspergillus nidulans spermidine synthase gene, complete cds Length = 2249 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 ctaccaggagatgattacccacct 311 ||||||||| |||||||||||||| Sbjct: 778 ctaccaggaaatgattacccacct 801 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,251,020 Number of Sequences: 3902068 Number of extensions: 3251020 Number of successful extensions: 99741 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 97444 Number of HSP's gapped (non-prelim): 2300 length of query: 360 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 338 effective length of database: 17,147,199,772 effective search space: 5795753522936 effective search space used: 5795753522936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)