>YDZB_SCHPO (O13718) Hypothetical protein C14C4.11 in chromosome I|
          Length = 734

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 9/45 (20%)
 Frame = +1

Query: 196 WKDEFLSYNELK---------PVIGAVSPAEFVARLDVQIEKINA 303
           W+D++++Y ELK         P  G    ++FV+ +D Q+EK+ A
Sbjct: 15  WRDKYMNYPELKHLLKTEEEAPSWGENDESKFVSVMDAQLEKVYA 59

>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -3

Query: 146  MACKSIQRPPTAFCSTNPQPKSTNLASSRAMQRQS 42
            M C +   PP A     P P    LASS+ M R S
Sbjct: 1303 MPCNAAPTPPPAVSEDQPTPSPQQLASSKPMNRPS 1337

>PHO87_YEAST (P25360) Inorganic phosphate transporter PHO87|
          Length = 923

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 145 MKFGKWLKRQIEQSLPAWKDEFLSYNELKPVI 240
           M+F  +LK     ++P W++ +L YNELK +I
Sbjct: 1   MRFSHFLKYN---AVPEWQNHYLDYNELKNLI 29

>COX5_SCHPO (O74988) Cytochrome c oxidase polypeptide V, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 174

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 73  RLVDFG--WGLVEQKAVGGLWIDLHAMKFGKWLKRQIEQSLPAW 198
           RLVD    WG++ Q+   GL  DL+A +   W    IE+   A+
Sbjct: 35  RLVDLDKRWGIMSQEEKDGLITDLYARQKQPWTTLSIEEKKAAY 78

>PEO1_HUMAN (Q96RR1) Twinkle protein, mitochondrial precursor (EC 3.6.1.-) (T7|
           gp4-like protein with intramitochondrial nucleoid
           localization) (T7-like mitochondrial DNA helicase)
           (Progressive external ophthalmoplegia 1 protein)
          Length = 684

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 136 LHAMKFGKWLKRQIEQSLPAWKDEFLSYNELK-PVIGAVSPAEFVARL 276
           L A+  G  L R +  +LPAW    +S+ +L+  V+G +S  E  A L
Sbjct: 343 LEALNGGFNLSRILRTALPAWHKSIVSFRQLREEVLGELSNVEQAAGL 390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,546,050
Number of Sequences: 219361
Number of extensions: 852348
Number of successful extensions: 2606
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2606
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)