ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42d02 |
|---|---|
| Clone Library Name | barley_pub |
>COMT1_CATRO (Q8W013) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 363 Score = 55.5 bits (132), Expect = 7e-08 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 285 L+ M LA+ +PM L + I L + + G +S +EL LP +PD P +L+R+ Sbjct: 21 LSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRI 80 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLLAS V + + DGG ER Y+L V + L + G S A +L + L+ + Sbjct: 81 LRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKN-EDGVSMAALLLMNQDKVLMES 139 Query: 457 W 459 W Sbjct: 140 W 140
>COMT1_PRUDU (Q43609) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 50.8 bits (120), Expect = 2e-06 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 285 L M+LA+ +PM L A I L + + G + LS ++ LP +PD P +L+R+ Sbjct: 21 LFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRM 80 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLLAS + + ADG ER Y L V + L + G S A L + L+ + Sbjct: 81 LRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKN-EEGVSIAPLCLMNQDKVLLES 139 Query: 457 W 459 W Sbjct: 140 W 140
>OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol| 3-O-methyltransferase 1) Length = 368 Score = 50.1 bits (118), Expect = 3e-06 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 14/125 (11%) Frame = +1 Query: 127 MELANMIAVPMALTAVIRLGV-----PAAVWAGGANL----PLSAAELLP--AGHPDPSV 273 ++LA+ +PM L I LG+ AAV GG P A+ LP A + Sbjct: 21 LQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADM 80 Query: 274 LERLLRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDA 444 ++R+LRLLAS V E ADG RRYA V + L P+ G S A L + Sbjct: 81 VDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPN-EDGVSMAALALMNQDKV 139 Query: 445 LVLAW 459 L+ +W Sbjct: 140 LMESW 144
>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)| (Chalcone O-methyltransferase) (ChOMT) Length = 372 Score = 50.1 bits (118), Expect = 3e-06 Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 12/126 (9%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLG----VPAAVWAGGANLPLSAAELLPAG--HPD-PSVL 276 L+ M L + P L A I L + A G P A LPA H D P+ L Sbjct: 26 LSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRL 85 Query: 277 ERLLRLLASRGVFSEHAA---DGGRERRYALTAVGRTLVPSAPSG--ASYADYVLQHHQD 441 +R+LRLLAS V + DGG ER Y L+ VG+ LVP G AS+ ++ Sbjct: 86 DRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLC---YP 142 Query: 442 ALVLAW 459 AL+ W Sbjct: 143 ALLQVW 148
>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 362 Score = 49.7 bits (117), Expect = 4e-06 Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 9/120 (7%) Frame = +1 Query: 127 MELANMIAVPMALTAVIRLGV----PAAVWAGGANLPLSAAELLPAGHPDPS---VLERL 285 M+LA+ +PM L + LG+ A AG A P LP +P +++R+ Sbjct: 21 MQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRM 80 Query: 286 LRLLASRGVFS--EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLAW 459 LRLLAS V DG ERRY+ VG+ L P+ G S A L + L+ +W Sbjct: 81 LRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPN-EDGVSMAALTLMNQDKVLMESW 139
>COMT1_CLABR (O23760) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 370 Score = 48.5 bits (114), Expect = 8e-06 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 10/124 (8%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGV---PAAVWAGGANLPLSAAEL---LPAGHPD-PSVL 276 L M+LA+ +PM L A I L V A G+ +S AE+ LP +PD P +L Sbjct: 23 LFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVML 82 Query: 277 ERLLRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDAL 447 +R+LRLLAS V + DG ER Y L V + L + G S A L + L Sbjct: 83 DRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKN-EDGVSLAPLCLMNQDKVL 141 Query: 448 VLAW 459 + +W Sbjct: 142 MESW 145
>COMT1_POPTM (Q00763) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) Length = 365 Score = 48.5 bits (114), Expect = 8e-06 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 285 L M+LA+ +PM L I L + + G LS +E+ LP +PD P +L+R+ Sbjct: 21 LFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRI 80 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLLAS + + + DG ER Y L V + L + G S + L + L+ + Sbjct: 81 LRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKN-EDGVSVSPLCLMNQDKVLMES 139 Query: 457 W 459 W Sbjct: 140 W 140
>COMT1_POPKI (Q43046) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) Length = 365 Score = 48.5 bits (114), Expect = 8e-06 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 285 L M+LA+ +PM L I L + + G LS +E+ LP +PD P +L+R+ Sbjct: 21 LFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRI 80 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLLAS + + + DG ER Y L V + L + G S + L + L+ + Sbjct: 81 LRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKN-EDGVSVSPLCLMNQDKVLMES 139 Query: 457 W 459 W Sbjct: 140 W 140
>COMT1_ROSCH (Q8GU25) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 47.8 bits (112), Expect = 1e-05 Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLG---VPAAVWAGGANLPLSAAELLPAGHPD-PSVLERL 285 L M+LA+ +PM L A I L + A G P A LP +P+ P +L+R+ Sbjct: 21 LFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRM 80 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLLAS + + DG ER Y L V + L + G S A L + LV + Sbjct: 81 LRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKN-EDGVSIAALCLMNQDKVLVES 139 Query: 457 W 459 W Sbjct: 140 W 140
>IEMT_CLABR (O04385) (Iso)eugenol O-methyltransferase (EC 2.1.1.146)| (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase) (IEMT) Length = 368 Score = 47.4 bits (111), Expect = 2e-05 Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 8/122 (6%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGV----PAAVWAGGANLPLSAAELLPAGHPD-PSVLER 282 L M+LA+ +PMAL A I L V +V G P A LP +P+ P +L+R Sbjct: 23 LFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDR 82 Query: 283 LLRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVL 453 +LRLLAS V + G ER Y L V + L + G S A ++L L+ Sbjct: 83 VLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKN-EDGVSLAPFLLTATDKVLLE 141 Query: 454 AW 459 W Sbjct: 142 PW 143
>COMT2_OCIBA (Q9XGV9) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 2) (COMT-2) (CAOMT-2) Length = 361 Score = 45.4 bits (106), Expect = 7e-05 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 118 LAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLS----AAELLPAGHPDPSVLERL 285 L M+LA+ +PM L + I L + + GA +S AA+LL +L+R+ Sbjct: 19 LFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRI 78 Query: 286 LRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLA 456 LRLL S + + DGG +R Y L V + L + G S A L + L+ + Sbjct: 79 LRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKN-EDGVSMAPLALMNQDKVLMES 137 Query: 457 W 459 W Sbjct: 138 W 138
>COMT3_POPKI (Q43047) Caffeic acid 3-O-methyltransferase 3 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-3) (CAOMT-3) Length = 364 Score = 44.7 bits (104), Expect = 1e-04 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Frame = +1 Query: 127 MELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERLLRL 294 M+L + +PM L I L + + G LS +++ LP +PD P +L+R+LRL Sbjct: 23 MQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRL 82 Query: 295 LASRGVF---SEHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLAW 459 LAS + DG ER Y L +V + L + G S + L + L+ +W Sbjct: 83 LASYSILICSLRDLPDGKVERLYGLASVCKFLTKN-EDGVSVSPLCLMNQDKVLMESW 139
>COMT2_POPTM (Q41086) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 2) (COMT-2) (CAOMT-2) Length = 364 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Frame = +1 Query: 127 MELANMIAVPMALTAVIRLG---VPAAVWAGGANLPLSAAELLPAGHPD-PSVLERLLRL 294 ++L + +PM L I L + A G P A LP +P+ P +L+R+LRL Sbjct: 23 LQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRL 82 Query: 295 LASRGVF---SEHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLAW 459 LAS + DG ER Y L +V + L + G S + L + L+ +W Sbjct: 83 LASYSILICSLRDLPDGKVERLYGLASVCKFLTRN-EDGVSVSPLCLMNQDKVLMESW 139
>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)| Length = 365 Score = 40.8 bits (94), Expect = 0.002 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Frame = +1 Query: 133 LANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERLLRLLA 300 LAN A PM L + L + G + +S +E+ + A +P+ P +L+R+LRLLA Sbjct: 28 LANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLA 87 Query: 301 SRGVFS--EHAADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDALVLAW 459 S V + +GG +R Y + L + G S ++ HH ++ +W Sbjct: 88 SHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQG-SLGPLLVLHHDKVMMESW 141
>RPOA_PRRSR (Q9WJB2) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP Length = 3960 Score = 33.1 bits (74), Expect = 0.36 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -3 Query: 342 PAAVGCVLREDAAGGEQA--EEPLEDGRVRVARREQLRGRERQVGAASPH 199 P V L + GG Q E GR+ V RE L RER+V A+ PH Sbjct: 3664 PGVVSYYLTKFVKGGAQVLPETVFSTGRIEVDCREYLDDREREVAASLPH 3713
>YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10 in chromosome| III (EC 3.6.1.-) Length = 1148 Score = 32.3 bits (72), Expect = 0.62 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +1 Query: 259 PDPSVLERLLRLLASRGVFSEHAADGGRERRYALTAVGRTLV--PSAPSGASYADYVLQH 432 PD +LE + L G SE +G E R +T +G+TL P APS A + QH Sbjct: 716 PDEQMLESAEKRLCRLGALSESTKNGKTEAR--ITKLGKTLAVFPLAPSYAKFIAMADQH 773 Query: 433 H 435 + Sbjct: 774 N 774
>EX5C_MYCTU (P96921) Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)| Length = 1097 Score = 32.0 bits (71), Expect = 0.80 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -3 Query: 315 EDAAGGEQAEEPLEDGRVRVARREQLRGRERQVGAAS-PHRGRHAQ 181 +DAA E L GR+ V R +++R R R + AA+ HR H Q Sbjct: 859 DDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQ 904
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Frame = -2 Query: 124 SPDVPPAGTSP----GRRWRARLPAATTTT---SSVRWSGGGVSERGP 2 S +PP+ SP GRRWR A+ TTT + WS G + P Sbjct: 203 STSMPPSRASPWPRYGRRWRTAGTASRTTTRTRTGRSWSTGSIVSAAP 250
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/56 (35%), Positives = 21/56 (37%) Frame = +3 Query: 3 GPRSLTPPPLHLTEDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQHDRRPDGADG 170 GPR LT PP GSR GDV + G GD G P G G Sbjct: 2490 GPRGLTGPP------------GSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRG 2533
>HMIN_DROME (P05527) Homeobox protein invected| Length = 576 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = -2 Query: 139 WPA----PSSPDVPPAGTSPGRRWRARLPAATTTTSSVRWSGGGVSERG 5 WPA D P +G SP RAR P T+SS GGG E+G Sbjct: 416 WPAWVYCTRYSDRPSSGRSP----RARKPKKPATSSSAAGGGGGGVEKG 460
>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT| protein 2) Length = 712 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Frame = +1 Query: 319 EHAADGGRERRYALTAVGRTLVPSAP-----SGASY-ADYVLQHHQDALV 450 E AD G+ +Y L A+GR V S+P SG S +++ +H+ D ++ Sbjct: 298 EEDADVGQGSKYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGII 347
>ILVD2_BORBR (Q7WJP7) Dihydroxy-acid dehydratase 2 (EC 4.2.1.9) (DAD 2)| Length = 570 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 151 VPMALTAVIRLGVPAAVWAGGANLPLSAA 237 +P + A++RL VPA GGA LP AA Sbjct: 128 LPAMMMAIVRLNVPAVFLYGGATLPGHAA 156
>EXOC_AZOBR (P45632) Phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 469 Score = 30.0 bits (66), Expect = 3.1 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Frame = +1 Query: 247 PAGHPDPSVLERLLRLLASRGVFSEHAA------DGGRERRYALTAVGRTLVPSAPSGAS 408 P HPDP+V + L+ L A+ +EH DG +R A+ +GR +V A Sbjct: 209 PNHHPDPTVEKNLVDLKAA---VAEHGCDIGIGFDGDGDRIGAIDHLGR-VVWGDQLVAI 264 Query: 409 YADYVLQHHQDALVLA 456 YA VL+ H A ++A Sbjct: 265 YAADVLKSHPGATIIA 280
>ATG18_NEUCR (Q96U88) Autophagy-related protein 18| Length = 461 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +3 Query: 93 GDVPAGGTSGDDGAGQHDRRPDGADG 170 G+VP+ G +G++G+G H R P G+ G Sbjct: 323 GEVPSAG-NGNNGSGSHKREPSGSFG 347
>Y2270_DEIRA (Q9RS57) UPF0078 membrane protein DR2270| Length = 195 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 115 RLAMMELANMIAVPMALTAVIRLGVPAAVWAGGANLPLSAAELL 246 RL + A ++AVP+ L RLG A AG A + + A LL Sbjct: 147 RLNAIPFATVVAVPVGLLIASRLGGGAEFLAGSAAMGIRAVHLL 190
>RPOA_PRRS1 (Q9YN02) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP Length = 3966 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -3 Query: 342 PAAVGCVLREDAAGGEQA--EEPLEDGRVRVARREQLRGRERQVGAASPH 199 P V L + G Q E GR+ V RE L RER+V A+ PH Sbjct: 3670 PGVVSYYLTKFVKGEAQLLPETVFSTGRIEVDCREYLDDREREVAASLPH 3719
>THA10_PONPY (Q5NVM3) THAP domain-containing protein 10| Length = 264 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 30 LHLTEDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQHDRRPDGADGRH 176 L ++ + +VA HR P P GG GD AG+ D R + RH Sbjct: 73 LRFSQRLRLVAGAVPTLHRVPAPAPKGGEEGDQ-AGRPDTRGELQAARH 120
>MURD_XANCP (Q8P775) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 468 Score = 29.3 bits (64), Expect = 5.2 Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Frame = +1 Query: 238 ELLPAGHPDPSVLERLLRLLASRGVFSEHAAD----GGRERRYALTAVGRTLV--PSAPS 399 E++ G P + LL LA F HAAD + R AL A G L+ P APS Sbjct: 376 EIVTMGANGPRI-HALLAPLAQSAGFGLHAADDLAHAMQLARSALGAQGGVLLLSPGAPS 434 Query: 400 GASYADYV 423 Y+DYV Sbjct: 435 FGVYSDYV 442
>MURD_XANC8 (Q4UWX9) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 468 Score = 29.3 bits (64), Expect = 5.2 Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Frame = +1 Query: 238 ELLPAGHPDPSVLERLLRLLASRGVFSEHAAD----GGRERRYALTAVGRTLV--PSAPS 399 E++ G P + LL LA F HAAD + R AL A G L+ P APS Sbjct: 376 EIVTMGANGPRI-HALLAPLAQSAGFGLHAADDLAHAMQLARSALGAQGGVLLLSPGAPS 434 Query: 400 GASYADYV 423 Y+DYV Sbjct: 435 FGVYSDYV 442
>ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT| protein 2) Length = 706 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Frame = +1 Query: 319 EHAADGGRERRYALTAVGRTLVPSAP-----SGASY-ADYVLQHHQDALV 450 E AD G+ +Y L A+GR V S+P +G S +++ +H+ D ++ Sbjct: 287 EEDADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGII 336
>MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 856 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = -3 Query: 348 PLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQVGAASPHRG 193 PL + AAGGE ++ + +R A R R R +VG +RG Sbjct: 486 PLQGELDVNFNPQAAGGETSDSSDPEETLRTAERRARRWRRARVGPEESNRG 537
>MLO1_ARATH (O49621) MLO-like protein 1 (AtMlo1) (MLO protein homolog 1)| (AtMLO-H1) Length = 526 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 42 EDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQHDRRPDGADGRHP 179 E+V V G + ++ D+ A ++GD+G+ Q PD G P Sbjct: 447 ENVQVGLVGWAQKVKQKRDLKAAASNGDEGSSQAGPGPDSGSGSAP 492
>PROA_STRCO (Q9RDK1) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 428 Score = 28.5 bits (62), Expect = 8.9 Identities = 28/92 (30%), Positives = 39/92 (42%) Frame = +1 Query: 166 TAVIRLGVPAAVWAGGANLPLSAAELLPAGHPDPSVLERLLRLLASRGVFSEHAADGGRE 345 TA++R+ A GGA LP A +L+P G SV E L+ +RG+ GG Sbjct: 164 TALVRVVRDAV---GGAGLPADAVQLVP-GESRESVRE----LMRARGLVDVLIPRGGAS 215 Query: 346 RRYALTAVGRTLVPSAPSGASYADYVLQHHQD 441 T V + VP +G + H D Sbjct: 216 --LISTVVQESTVPVIETGTGNCHVYVDAHAD 245
>HNF1A_HUMAN (P20823) Hepatocyte nuclear factor 1-alpha (HNF-1A) (Liver-specific| transcription factor LF-B1) (LFB1) (Transcription factor 1) (TCF-1) Length = 631 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -2 Query: 136 PAPSSPDVPPAGTSPGRRWRARL-PAATTTTSSVRWSGGG 20 PA SSP +PP SP + R AT+ T+ V S GG Sbjct: 300 PAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG 339
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = -2 Query: 133 APSSPDVPPAGTSPGRRWRARLPA----ATTTTSSVRWSGGGVSERGP 2 +P+SP PPA +P + +P A +T+SS R S G +E P Sbjct: 1134 SPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEP 1181
>GALK1_CANFA (Q9GKK4) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 392 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 328 ADGGRERRYALTAVGRTLVPSAPSGASYADYVLQHHQDA 444 AD R ++ L R+L P P A+Y V+QH+ A Sbjct: 82 ADEPRRLQFPLPTAQRSLEPGTPRWANYVKGVIQHYPAA 120
>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 4/59 (6%) Frame = +3 Query: 6 PRSLTPPPLHLTEDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQ----HDRRPDGADG 170 P S PPP H GS + G +G T D GAG+ +R P+ G Sbjct: 560 PYSPQPPPYHELSSYTY-GGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSG 617
>DVL2_HUMAN (O14641) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 4/59 (6%) Frame = +3 Query: 6 PRSLTPPPLHLTEDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQ----HDRRPDGADG 170 P S PPP H GS + G +G T D GAG+ +R P+ G Sbjct: 560 PYSPQPPPYHELSSYTY-GGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSG 617
>MURD_XANAC (Q8PII9) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 468 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = +1 Query: 238 ELLPAGHPDPSVLERLLRLLASRGVFSEHAA-DGGRERRYALTAVGRT-----LVPSAPS 399 E++ G P + LL LA G F HAA D A A+G L P APS Sbjct: 376 EIVTMGANGPRI-HALLAPLAEAGHFGLHAANDLEHAMGLARNALGEQGGVVLLSPGAPS 434 Query: 400 GASYADYV 423 +Y+DYV Sbjct: 435 FGAYSDYV 442 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,319,153 Number of Sequences: 219361 Number of extensions: 751963 Number of successful extensions: 4530 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 4138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4524 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
