ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 98 tgtccccgccggaggcacgtctggcgatgatggagctggccaacatgatcgccgtcccga 157 |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||||| | Sbjct: 117 tgtccccggcggaggccaggctggcgatgatggagctcgccaacatgatctccgtcccca 176 Query: 158 tggcgctgacggccgtcatccggctgggcgtgccggccgcggtgtgggctggcggcgcca 217 ||||||| || ||||||||||| || ||||| || ||| | | ||||| || ||||||| Sbjct: 177 tggcgctcaccgccgtcatccgcctcggcgtccccgccaagctctgggcgggaggcgcca 236 Query: 218 acttgccgctctcggccgcggagctgctcccggcgggccacccggacccgtccgtcctcg 277 || |||||| | ||||| || || ||||| ||||||||||||||||| |||||||||| Sbjct: 237 acgccccgctcgccgccgccgacctcctccccgcgggccacccggacccctccgtcctcg 296 Query: 278 agcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 297 agcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 343 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 396 ctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacgcgct 446 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 433 ctccggcgcgtcctacgccgactacgttctgcagcaccaccaggatgcgct 483
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 98 tgtccccgccggaggcacgtctggcgatgatggagctggccaacatgatcgccgtcccga 157 |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||||| | Sbjct: 35389120 tgtccccggcggaggccaggctggcgatgatggagctcgccaacatgatctccgtcccca 35389179 Query: 158 tggcgctgacggccgtcatccggctgggcgtgccggccgcggtgtgggctggcggcgcca 217 ||||||| || ||||||||||| || ||||| || ||| | | ||||| || ||||||| Sbjct: 35389180 tggcgctcaccgccgtcatccgcctcggcgtccccgccaagctctgggcgggaggcgcca 35389239 Query: 218 acttgccgctctcggccgcggagctgctcccggcgggccacccggacccgtccgtcctcg 277 || |||||| | ||||| || || ||||| ||||||||||||||||| |||||||||| Sbjct: 35389240 acgccccgctcgccgccgccgacctcctccccgcgggccacccggacccctccgtcctcg 35389299 Query: 278 agcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 35389300 agcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 35389346 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 396 ctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacgcgct 446 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 35389436 ctccggcgcgtcctacgccgactacgttctgcagcaccaccaggatgcgct 35389486 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 54 gtcgtcgccgccggcagccgagcccgccaccgccg 88 |||||||||| ||||||||| || ||||||||||| Sbjct: 11795289 gtcgtcgccgtcggcagccgcgcacgccaccgccg 11795323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 6978954 gtcgtcgtcgtcgccgccggc 6978934 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 8227696 tcgtcgtcgtcgccgccggc 8227715
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 98 tgtccccgccggaggcacgtctggcgatgatggagctggccaacatgatcgccgtcccga 157 |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||||| | Sbjct: 641 tgtccccggcggaggccaggctggcgatgatggagctcgccaacatgatctccgtcccca 700 Query: 158 tggcgctgacggccgtcatccggctgggcgtgccggccgcggtgtgggctggcggcgcca 217 ||||||| || ||||||||||| || ||||| || ||| | | ||||| || ||||||| Sbjct: 701 tggcgctcaccgccgtcatccgcctcggcgtccccgccaagctctgggcgggaggcgcca 760 Query: 218 acttgccgctctcggccgcggagctgctcccggcgggccacccggacccgtccgtcctcg 277 || |||||| | ||||| || || ||||| ||||||||||||||||| |||||||||| Sbjct: 761 acgccccgctcgccgccgccgacctcctccccgcgggccacccggacccctccgtcctcg 820 Query: 278 agcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 821 agcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 867 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 396 ctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacgcgct 446 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 957 ctccggcgcgtcctacgccgactacgttctgcagcaccaccaggatgcgct 1007
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 98 tgtccccgccggaggcacgtctggcgatgatggagctggccaacatgatcgccgtcccga 157 |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||||| | Sbjct: 49668 tgtccccggcggaggccaggctggcgatgatggagctcgccaacatgatctccgtcccca 49727 Query: 158 tggcgctgacggccgtcatccggctgggcgtgccggccgcggtgtgggctggcggcgcca 217 ||||||| || ||||||||||| || ||||| || ||| | | ||||| || ||||||| Sbjct: 49728 tggcgctcaccgccgtcatccgcctcggcgtccccgccaagctctgggcgggaggcgcca 49787 Query: 218 acttgccgctctcggccgcggagctgctcccggcgggccacccggacccgtccgtcctcg 277 || |||||| | ||||| || || ||||| ||||||||||||||||| |||||||||| Sbjct: 49788 acgccccgctcgccgccgccgacctcctccccgcgggccacccggacccctccgtcctcg 49847 Query: 278 agcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 49848 agcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 49894 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 396 ctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacgcgct 446 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 49984 ctccggcgcgtcctacgccgactacgttctgcagcaccaccaggatgcgct 50034
>dbj|AK105029.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F05, full insert sequence Length = 1295 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 98 tgtccccgccggaggcacgtctggcgatgatggagctggccaacatgatcgccgtcccga 157 |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||||| | Sbjct: 113 tgtccccggcggaggccaggctggcgatgatggagctcgccaacatgatctccgtcccca 172 Query: 158 tggcgctgacggccgtcatccggctgggcgtgccggccgcggtgtgggctggcggcgcca 217 ||||||| || ||||||||||| || ||||| || ||| | | ||||| || ||||||| Sbjct: 173 tggcgctcaccgccgtcatccgcctcggcgtccccgccaagctctgggcgggaggcgcca 232 Query: 218 acttgccgctctcggccgcggagctgctcccggcgggccacccggacccgtccgtcctcg 277 || |||||| | ||||| || || ||||| ||||||||||||||||| |||||||||| Sbjct: 233 acgccccgctcgccgccgccgacctcctccccgcgggccacccggacccctccgtcctcg 292 Query: 278 agcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 293 agcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 339 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 396 ctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacgcgct 446 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 429 ctccggcgcgtcctacgccgactacgttctgcagcaccaccaggatgcgct 479
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 394 ccctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12735229 ccctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 12735277 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 12735106 tccgtcctcgagcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 12735162 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tcgtcgtcgccgccggcagcc 72 ||||||||||||||||||||| Sbjct: 12138127 tcgtcgtcgccgccggcagcc 12138107 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 6743336 gtcgtcgtcgtcgccgccggc 6743316 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 22162576 tgtcgtcgtcgtcgccgccg 22162595
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 394 ccctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12731992 ccctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 12732040 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 12731869 tccgtcctcgagcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 12731925 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tcgtcgtcgccgccggcagcc 72 ||||||||||||||||||||| Sbjct: 12134890 tcgtcgtcgccgccggcagcc 12134870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 6742549 gtcgtcgtcgtcgccgccggc 6742529 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 22155605 tgtcgtcgtcgtcgccgccg 22155624
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 394 ccctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89682 ccctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 89730 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 89559 tccgtcctcgagcgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 89615
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 395 cctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 13526746 cctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 13526699 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 ||||||||| | || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 13526873 tccgtcctccaccgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 13526817 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccggc 68 |||||||||||||||||||||| Sbjct: 12258302 tgtcgtcgtcgtcgccgccggc 12258323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gccgagcccgccaccgccgcc 90 ||||||||||||||||||||| Sbjct: 980450 gccgagcccgccaccgccgcc 980430 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccgagcccgccaccgccgcc 90 |||||||||||||||||||| Sbjct: 980773 ccgagcccgccaccgccgcc 980754
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1175F05 Length = 126842 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 395 cctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101674 cctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 101627 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 ||||||||| | || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 101801 tccgtcctccaccgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 101745
>dbj|AK106872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D09, full insert sequence Length = 844 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 395 cctccggcgcgtcctacgccgactacgtgctgcagcaccaccaggacg 442 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 cctccgccgcgtcctacgccgactacgtgctgcagcaccaccaggacg 273 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 268 tccgtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttctcggagcac 324 ||||||||| | || ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 447 tccgtcctccaccgcctcctccgcctcctcgcctcccgcggcgtcttctccgagcac 391
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 271 gtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttct 316 ||||||||||| ||||||||||||||| ||||| || | ||||||| Sbjct: 30113394 gtcctcgagcgcctcctccgcctgctcacctcctgcagtgtcttct 30113439 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 59 cgccgccggcagccgagcccgccaccgccgccc 91 ||||||||||||||| ||||||||||||||| Sbjct: 28380290 cgccgccggcagccgccaccgccaccgccgccc 28380322 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 17911367 gtcgtcgtcgtcgccgccggc 17911387 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 40742792 tgtcgtcgtcgtcgccgccg 40742773 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 39070516 tgtcgtcgtcgtcgccgccg 39070535 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 125 tgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| ||||||||| |||||| |||||||| Sbjct: 30113266 tgatggagctggtgaacatgatctccgtccttatggcgct 30113305 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 6524584 tcgtcgtcgtcgccgccggc 6524565 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 604154 gtcgtcgtcgtcgccgccgg 604173
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 271 gtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttct 316 ||||||||||| ||||||||||||||| ||||| || | ||||||| Sbjct: 18216 gtcctcgagcgcctcctccgcctgctcacctcctgcagtgtcttct 18261 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 125 tgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| ||||||||| |||||| |||||||| Sbjct: 18088 tgatggagctggtgaacatgatctccgtccttatggcgct 18127
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 271 gtcctcgagcggctcctccgcctgctcgcctcccgcggcgtcttct 316 ||||||||||| ||||||||||||||| ||||| || | ||||||| Sbjct: 109384 gtcctcgagcgcctcctccgcctgctcacctcctgcagtgtcttct 109429 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 125 tgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| ||||||||| |||||| |||||||| Sbjct: 109256 tgatggagctggtgaacatgatctccgtccttatggcgct 109295
>ref|NM_006243.2| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform (PPP2R5A), mRNA Length = 3145 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 573 agatgtcgtcgtcgtcgccgccggc 597
>gb|BC022474.1| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone MGC:26270 IMAGE:4815091), complete cds Length = 2717 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 159 agatgtcgtcgtcgtcgccgccggc 183
>gb|BC110883.1| Homo sapiens protein phosphatase 2, regulatory subunit B (B56), alpha isoform, mRNA (cDNA clone MGC:131915 IMAGE:6045358), complete cds Length = 2868 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 282 agatgtcgtcgtcgtcgccgccggc 306
>emb|AL451060.13| Human DNA sequence from clone RP11-264J19 on chromosome 1 Contains a novel gene, the 5' end of the PPP2R5A gene for protein phosphatase 2 regulatory subunit B (B56) alpha isoform and a CpG island, complete sequence Length = 62348 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 62317 agatgtcgtcgtcgtcgccgccggc 62341
>emb|AL360091.28| Human DNA sequence from clone RP11-384C4 on chromosome 1 Contains the 3' end of the PPP2R5A gene for protein phosphatase 2 regulatory subunit B (B56) alpha isoform, a ribosomal protein L23a (RPL23A) pseudogene, the 3' end of a novel gene (FLJ10874), two novel genes and three CpG islands, complete sequence Length = 99183 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 1969 agatgtcgtcgtcgtcgccgccggc 1993
>gb|L42373.1|HUMPP2A Homo sapiens phosphatase 2A B56-alpha (PP2A) mRNA, complete cds Length = 3120 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 agatgtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||||||| Sbjct: 570 agatgtcgtcgtcgtcgccgccggc 594
>ref|XM_483458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 45 gatgtcgtcgtcgtcgccgccgg 67 ||||||||||||||||||||||| Sbjct: 660 gatgtcgtcgtcgtcgccgccgg 682
>gb|AY593479.1| Collimonas fungivorans fosmid CFUFOS19, complete sequence Length = 38984 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 cgccgccggcagccgagcccgcc 81 ||||||||||||||||||||||| Sbjct: 9579 cgccgccggcagccgagcccgcc 9601
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 51 gtcgtcgtcgccgccggcagccgagcccgcc 81 |||| |||||| ||||||||||||||||||| Sbjct: 1031991 gtcgccgtcgcggccggcagccgagcccgcc 1031961
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccgg 67 ||||||||||||||||||||||| Sbjct: 26327829 gatgtcgtcgtcgtcgccgccgg 26327807 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 24880599 tcgtcgtcgtcgccgccggc 24880580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 20153653 tgtcgtcgtcgtcgccgccg 20153672 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagc 71 |||||||||||||||| ||||||| Sbjct: 1671616 gtcgtcgtcgtcgccggcggcagc 1671593
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 54 gtcgtcgccgccggcagccgagcccgccaccgccg 88 |||||||||| ||||||||| || ||||||||||| Sbjct: 103179 gtcgtcgccgtcggcagccgcgcacgccaccgccg 103213
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccgg 67 ||||||||||||||||||||||| Sbjct: 57410 gatgtcgtcgtcgtcgccgccgg 57388
>dbj|AK100297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077B14, full insert sequence Length = 1629 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 45 gatgtcgtcgtcgtcgccgccgg 67 ||||||||||||||||||||||| Sbjct: 660 gatgtcgtcgtcgtcgccgccgg 682
>ref|XM_472310.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1989 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 123 gatgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| || ||||||||| |||| || |||||||| Sbjct: 1914 gatgatggagctagcgaacatgatctccgttcccatggcgct 1873
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 cggctgggcgtgccggccgcgg 199 |||||||||||||||||||||| Sbjct: 128181 cggctgggcgtgccggccgcgg 128202
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 cggctgggcgtgccggccgcgg 199 |||||||||||||||||||||| Sbjct: 80803 cggctgggcgtgccggccgcgg 80824
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 cggctgggcgtgccggccgcgg 199 |||||||||||||||||||||| Sbjct: 263071 cggctgggcgtgccggccgcgg 263050
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 123 gatgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| || ||||||||| |||| || |||||||| Sbjct: 34731 gatgatggagctagcgaacatgatctccgttcccatggcgct 34690
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 123 gatgatggagctggccaacatgatcgccgtcccgatggcgct 164 |||||||||||| || ||||||||| |||| || |||||||| Sbjct: 19383477 gatgatggagctagcgaacatgatctccgttcccatggcgct 19383436 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 20725750 gtcgtcgtcgtcgccgccggc 20725770 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggca 69 ||||||||||||||||||||| Sbjct: 5759873 tcgtcgtcgtcgccgccggca 5759893 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cgtcgtcgtcgccgccggcagccg 73 ||||| |||||||||||||||||| Sbjct: 21381714 cgtcgccgtcgccgccggcagccg 21381691 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 20944578 gtcgtcgtcgtcgccgccgg 20944597 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 gccgacggcggccgggagcggcgg 351 ||||||||||||| |||||||||| Sbjct: 17721969 gccgacggcggccaggagcggcgg 17721946
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccggc 68 |||||||||||||||||||||| Sbjct: 27316937 tgtcgtcgtcgtcgccgccggc 27316958 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 25511981 gtcgtcgtcgtcgccgccggc 25512001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 atgtcgtcgtcgtcgccgccg 66 ||||||||||||||||||||| Sbjct: 9053939 atgtcgtcgtcgtcgccgccg 9053959 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 4627648 gtcgtcgtcgtcgccgccggc 4627628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 11423935 tgtcgtcgtcgtcgccgccg 11423916
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccggc 68 |||||||||||||||||||||| Sbjct: 173953 tgtcgtcgtcgtcgccgccggc 173974
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccggc 68 |||||||||||||||||||||| Sbjct: 59764 tgtcgtcgtcgtcgccgccggc 59785
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccggc 68 |||||||||||||||||||||| Sbjct: 41856 tgtcgtcgtcgtcgccgccggc 41877
>ref|XM_475611.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1566 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 248 gtcgtcgtcgtcgccgccggc 228
>ref|XM_472449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 422 gtcgtcgtcgtcgccgccggc 402
>ref|XM_507653.1| PREDICTED: Pan troglodytes similar to CUGBP2 protein (LOC450298), mRNA Length = 3240 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 cctccgcctgctcgcctcccgcggc 309 |||||| |||||||||||||||||| Sbjct: 171 cctccggctgctcgcctcccgcggc 195
>ref|XM_470598.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 255 gtcgtcgtcgtcgccgccggc 275
>ref|NM_196955.1| Oryza sativa (japonica cultivar-group) putative peptide transport protein (OSJNBa0079L16.13), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagcc 72 |||||||||| |||||||||||||| Sbjct: 45 gtcgtcgtcgccgccgccggcagcc 21
>ref|NM_186188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 783 gtcgtcgtcgtcgccgccggc 803
>ref|XM_612304.2| PREDICTED: Bos taurus similar to protein phosphatase 2, regulatory subunit B (B56), alpha isoform (LOC533037), partial mRNA Length = 387 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 atgtcgtcgtcgtcgccgccg 66 ||||||||||||||||||||| Sbjct: 1 atgtcgtcgtcgtcgccgccg 21
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cgtcgtcgccgccggcagccg 73 ||||||||||||||||||||| Sbjct: 42771 cgtcgtcgccgccggcagccg 42791
>gb|AY341858.1| Oryza sativa (japonica cultivar-group) WRKY18 mRNA, complete cds Length = 1070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 836 gtcgtcgtcgtcgccgccggc 856
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tcgtcgtcgccgccggcagcc 72 ||||||||||||||||||||| Sbjct: 30736 tcgtcgtcgccgccggcagcc 30716
>tpg|BK005032.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 29 (WRKY29) gene, complete cds Length = 3368 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 3278 gtcgtcgtcgtcgccgccggc 3298
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 81409 gtcgtcgtcgtcgccgccggc 81429
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagcc 72 |||||||||| |||||||||||||| Sbjct: 16900822 gtcgtcgtcgccgccgccggcagcc 16900798 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 13413905 gtcgtcgtcgtcgccgccgg 13413886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 1082270 tcgtcgtcgtcgccgccggc 1082251
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 24576163 gtcgtcgtcgtcgccgccggc 24576183 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 629909 gtcgtcgtcgtcgccgccggc 629889 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccgagcccgccaccgccgcc 90 |||||||||||||||||||| Sbjct: 16962759 ccgagcccgccaccgccgcc 16962778 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 14331058 tgtcgtcgtcgtcgccgccg 14331039
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 3308939 gtcgtcgtcgtcgccgccggc 3308919 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 26673181 gtcgtcgtcgtcgccgccgg 26673162 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 25417822 tgtcgtcgtcgtcgccgccg 25417803 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 18434455 gtcgtcgtcgtcgccgccgg 18434436
>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12, complete sequence Length = 164425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggca 69 ||||||||||||||||||||| Sbjct: 54859 tcgtcgtcgtcgccgccggca 54879
>emb|AL731580.3|OSJN00227 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0001M07, complete sequence Length = 114335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggca 69 ||||||||||||||||||||| Sbjct: 103678 tcgtcgtcgtcgccgccggca 103698
>gb|AC007005.3| Homo sapiens BAC clone RP11-532N23 from 2, complete sequence Length = 167776 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gcagccgagcccgccaccgccgccc 91 ||||||||||||||| ||||||||| Sbjct: 57133 gcagccgagcccgccgccgccgccc 57157
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagcc 72 |||||||||| |||||||||||||| Sbjct: 85274 gtcgtcgtcgccgccgccggcagcc 85250
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 59 cgccgccggcagccgagcccgccaccgccgccc 91 ||||||||||||||| ||||||||||||||| Sbjct: 95390 cgccgccggcagccgccaccgccaccgccgccc 95422
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 31202 gtcgtcgtcgtcgccgccggc 31222
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 64411 gtcgtcgtcgtcgccgccggc 64391
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 158489 gtcgtcgtcgtcgccgccggc 158509
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gccgagcccgccaccgccgcc 90 ||||||||||||||||||||| Sbjct: 144577 gccgagcccgccaccgccgcc 144557 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccgagcccgccaccgccgcc 90 |||||||||||||||||||| Sbjct: 144900 ccgagcccgccaccgccgcc 144881
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 72576 gtcgtcgtcgtcgccgccggc 72556
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 atgtcgtcgtcgtcgccgccg 66 ||||||||||||||||||||| Sbjct: 101257 atgtcgtcgtcgtcgccgccg 101277
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 30298 gtcgtcgtcgtcgccgccggc 30318
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 115012 gtcgtcgtcgtcgccgccggc 114992
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gccgagcccgccaccgccgcc 90 ||||||||||||||||||||| Sbjct: 18143 gccgagcccgccaccgccgcc 18123 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ccgagcccgccaccgccgcc 90 |||||||||||||||||||| Sbjct: 18466 ccgagcccgccaccgccgcc 18447
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 32230 gtcgtcgtcgtcgccgccggc 32250
>dbj|AK120982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042C18, full insert sequence Length = 1296 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 59 cgccgccggcagccgagcccgccaccgccgccc 91 ||||||||||||||| ||||||||||||||| Sbjct: 128 cgccgccggcagccgccaccgccaccgccgccc 96
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 69457 gtcgtcgtcgtcgccgccggc 69477
>dbj|AK099769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B20, full insert sequence Length = 1540 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 226 gtcgtcgtcgtcgccgccggc 206
>dbj|AK107777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-C02, full insert sequence Length = 973 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 265 gtcgtcgtcgtcgccgccggc 285
>ref|XM_307531.2| Anopheles gambiae str. PEST ENSANGP00000002091 (ENSANGG00000001776), partial mRNA Length = 1440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cgactacgtgctgcagcacca 434 ||||||||||||||||||||| Sbjct: 1371 cgactacgtgctgcagcacca 1391
>dbj|AK106218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H04, full insert sequence Length = 1017 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 311 gtcgtcgtcgtcgccgccggc 291
>dbj|AK105960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E01, full insert sequence Length = 1040 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 315 gtcgtcgtcgtcgccgccggc 295
>dbj|AK104594.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C11, full insert sequence Length = 1039 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 315 gtcgtcgtcgtcgccgccggc 295
>dbj|AK104264.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D07, full insert sequence Length = 1037 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 311 gtcgtcgtcgtcgccgccggc 291
>dbj|AK103997.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-B11, full insert sequence Length = 1034 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 309 gtcgtcgtcgtcgccgccggc 289
>dbj|AK101055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020K03, full insert sequence Length = 2106 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagcc 72 |||||||||| |||||||||||||| Sbjct: 183 gtcgtcgtcgccgccgccggcagcc 159
>dbj|AK100788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A17, full insert sequence Length = 871 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 312 gtcgtcgtcgtcgccgccggc 292
>dbj|AK061578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H02, full insert sequence Length = 1126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 315 gtcgtcgtcgtcgccgccggc 295
>dbj|AK061494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C05, full insert sequence Length = 1051 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 311 gtcgtcgtcgtcgccgccggc 291
>dbj|AK060571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C04, full insert sequence Length = 1303 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 311 gtcgtcgtcgtcgccgccggc 291
>dbj|AK058605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A02, full insert sequence Length = 1770 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 315 gtcgtcgtcgtcgccgccggc 295
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 79123 gtcgtcgtcgtcgccgccggc 79143
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagcc 72 |||||||||| |||||||||||||| Sbjct: 16909862 gtcgtcgtcgccgccgccggcagcc 16909838 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 13421245 gtcgtcgtcgtcgccgccgg 13421226 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 1082267 tcgtcgtcgtcgccgccggc 1082248
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 71901 gtcgtcgtcgtcgccgccggc 71921
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 102763 gtcgtcgtcgtcgccgccggc 102743
>dbj|D11476.1|LPVDNAP Lymantria dispar nuclear polyhedrosis virus gene for DNA polymerase, complete cds Length = 4808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccggc 68 ||||||||||||||||||||| Sbjct: 1852 gtcgtcgtcgtcgccgccggc 1872
>ref|NM_100465.2| Arabidopsis thaliana pepsin A AT1G05840 mRNA, complete cds Length = 1664 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 36 gtcgtcgtcgtcgccgccgg 55
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 54178 gtcgtcgtcgtcgccgccgg 54159
>ref|NM_188484.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 189 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 53 tcgtcgtcgtcgccgccggc 34
>ref|NM_183534.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 490 gtcgtcgtcgtcgccgccgg 471
>ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 620 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 63 cgccaccgccgcccccgagatggccccg 90
>ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 619 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 64 cgccaccgccgcccccgagatggccccg 91
>ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 619 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 64 cgccaccgccgcccccgagatggccccg 91
>ref|XM_483221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 71 tcgtcgtcgtcgccgccggc 52
>ref|XM_482449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 969 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 49 tgtcgtcgtcgtcgccgccg 30
>ref|XM_479926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 417 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagc 71 |||||||||||||||| ||||||| Sbjct: 69 gtcgtcgtcgtcgccggcggcagc 46
>ref|XM_475810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 75 gtcgtcgtcgtcgccgccgg 56
>ref|XM_475711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 778 tgtcgtcgtcgtcgccgccg 759
>ref|XM_464791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2463 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 1772 tcgtcgtcgtcgccgccggc 1753
>ref|NM_184862.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 79 tgtcgtcgtcgtcgccgccg 60
>ref|NM_196426.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0060A14.16), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 828 gtcgtcgtcgtcgccgccgg 809
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gccgagcccgccaccgccgc 89 |||||||||||||||||||| Sbjct: 966128 gccgagcccgccaccgccgc 966109
>ref|NM_190289.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 210 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 100 tgtcgtcgtcgtcgccgccg 81
>ref|NM_190000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 39 tgtcgtcgtcgtcgccgccg 58
>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094M06, complete sequence Length = 135583 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 96422 tgtcgtcgtcgtcgccgccg 96441
>ref|XM_364604.1| Magnaporthe grisea 70-15 hypothetical protein (MG09322.4) partial mRNA Length = 1614 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gctcgcctcccgcggcgtct 313 |||||||||||||||||||| Sbjct: 1056 gctcgcctcccgcggcgtct 1075
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07, complete sequence Length = 156163 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 74292 gtcgtcgtcgtcgccgccgg 74273
>gb|AY656760.1| Ovis aries transcription factor YY1 mRNA, partial cds Length = 1108 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccggc 68 ||||| |||||||||||||||||| Sbjct: 424 gatgtagtcgtcgtcgccgccggc 401
>ref|XM_960503.1| Neurospora crassa OR74A hypothetical protein (NCU02914.1) partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 1756 tgtcgtcgtcgtcgccgccg 1737
>gb|BC017166.1| Homo sapiens glypican 4, mRNA (cDNA clone MGC:9107 IMAGE:3922774), complete cds Length = 2628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 353 ctcctccgcctgctcgcctc 372
>ref|XM_330101.1| Neurospora crassa OR74A hypothetical protein (NCU02914.1) partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 1756 tgtcgtcgtcgtcgccgccg 1737
>ref|NM_001448.2| Homo sapiens glypican 4 (GPC4), mRNA Length = 3714 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 59 ctcctccgcctgctcgcctc 78
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 58183 tgtcgtcgtcgtcgccgccg 58164
>gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosome 1, complete sequence Length = 177041 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctccgccaccactccacctc 38 |||||||||||||||||||| Sbjct: 88338 ctccgccaccactccacctc 88357
>ref|XM_804275.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9 (Tc00.1047053504163.30) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 569 tcgtcgtcgtcgccgccggc 550
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ctgctcgcctcccgcggcgt 311 |||||||||||||||||||| Sbjct: 3263 ctgctcgcctcccgcggcgt 3244
>ref|XM_816173.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9 (Tc00.1047053506401.120) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 569 tcgtcgtcgtcgccgccggc 550
>ref|XM_863445.1| PREDICTED: Canis familiaris similar to YY1 transcription factor, transcript variant 4 (LOC611171), mRNA Length = 2345 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccggc 68 ||||| |||||||||||||||||| Sbjct: 536 gatgtagtcgtcgtcgccgccggc 513
>ref|XM_863441.1| PREDICTED: Canis familiaris similar to YY1 transcription factor, transcript variant 3 (LOC611171), mRNA Length = 2281 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccggc 68 ||||| |||||||||||||||||| Sbjct: 536 gatgtagtcgtcgtcgccgccggc 513
>ref|XM_849421.1| PREDICTED: Canis familiaris similar to YY1 transcription factor, transcript variant 1 (LOC611171), mRNA Length = 2395 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccggc 68 ||||| |||||||||||||||||| Sbjct: 589 gatgtagtcgtcgtcgccgccggc 566
>ref|XM_863438.1| PREDICTED: Canis familiaris similar to YY1 transcription factor, transcript variant 2 (LOC611171), mRNA Length = 2183 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gatgtcgtcgtcgtcgccgccggc 68 ||||| |||||||||||||||||| Sbjct: 536 gatgtagtcgtcgtcgccgccggc 513
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cgtcgtcgtcgccgccggcagccg 73 ||||| |||||||||||||||||| Sbjct: 31464 cgtcgccgtcgccgccggcagccg 31441
>gb|AY358507.1| Homo sapiens clone DNA56436 glypican 4 (UNQ474) mRNA, complete cds Length = 2651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 345 ctcctccgcctgctcgcctc 364
>ref|XM_541124.2| PREDICTED: Canis familiaris similar to CG5937-PA (LOC484007), mRNA Length = 6579 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ggcagccgagcccgccaccgccgc 89 |||||||| ||||||||||||||| Sbjct: 5663 ggcagccgggcccgccaccgccgc 5640
>emb|AL109623.9|HSDJ900E8 Human DNA sequence from clone RP5-900E8 on chromosome Xq25-27.1 Contains the 5' end of the GPC4 gene for glypican 4 and a CpG island, complete sequence Length = 101259 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 11903 ctcctccgcctgctcgcctc 11884
>gb|AY142549.1| Arabidopsis thaliana clone RAFL06-86-K07 (R18035) mRNA sequence Length = 3012 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 32 gtcgtcgtcgtcgccgccgg 51
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 1082270 tcgtcgtcgtcgccgccggc 1082251
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 cgctggtgctggcgtggccg 462 |||||||||||||||||||| Sbjct: 2318882 cgctggtgctggcgtggccg 2318901
>gb|BC064691.1| Homo sapiens mitogen-activated protein kinase kinase kinase kinase 4, mRNA (cDNA clone IMAGE:30343496), containing frame-shift errors Length = 4425 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gcagccgagcccgccaccgccgcc 90 ||||||||||||||| |||||||| Sbjct: 177 gcagccgagcccgccgccgccgcc 200
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 gccgacggcggccgggagcggcgg 351 ||||||||||||| |||||||||| Sbjct: 94344 gccgacggcggccaggagcggcgg 94321
>dbj|AB252147.1| Triticum aestivum Tamyb7 mRNA for myb-related protein, complete cds Length = 876 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 827 tgtcgtcgtcgtcgccgccg 808
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 cagcaccaccaggacgcgct 446 |||||||||||||||||||| Sbjct: 4348558 cagcaccaccaggacgcgct 4348539 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gccgagcccgccaccgccgc 89 |||||||||||||||||||| Sbjct: 396944 gccgagcccgccaccgccgc 396925
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 79723 tcgtcgtcgtcgccgccggc 79704
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 106282 gtcgtcgtcgtcgccgccgg 106263
>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence Length = 177775 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctccgccaccactccacctc 38 |||||||||||||||||||| Sbjct: 142167 ctccgccaccactccacctc 142186
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 15923824 tgtcgtcgtcgtcgccgccg 15923843
>gb|AC084601.1|CBRG43I20 Caenorhabditis briggsae cosmid G43I20, complete sequence Length = 41510 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgtcgtcgtcgccgccggca 69 |||||||||||||||||||| Sbjct: 15370 cgtcgtcgtcgccgccggca 15389
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 62286 tgtcgtcgtcgtcgccgccg 62267
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 45438 tgtcgtcgtcgtcgccgccg 45419
>gb|AY089011.1| Arabidopsis thaliana clone 158528 mRNA, complete sequence Length = 1658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 36 gtcgtcgtcgtcgccgccgg 55
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 88496 tgtcgtcgtcgtcgccgccg 88515
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489G09 Length = 148707 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 92064 tcgtcgtcgtcgccgccggc 92045
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 4755 tcgtcgtcgtcgccgccggc 4736
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tcgagcggctcctccgcctgctcg 298 ||||||||| |||||||||||||| Sbjct: 450070 tcgagcggcccctccgcctgctcg 450093
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgtcgtcgtcgccgccggca 69 |||||||||||||||||||| Sbjct: 952348 cgtcgtcgtcgccgccggca 952367
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 111644 tgtcgtcgtcgtcgccgccg 111625
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 78759 gtcgtcgtcgtcgccgccgg 78778
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 59842 tcgtcgtcgtcgccgccggc 59861
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccgagcccgccaccgccgcc 90 |||||||||||||||||||| Sbjct: 42170 ccgagcccgccaccgccgcc 42189
>dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1051_D12 Length = 144262 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 81369 tgtcgtcgtcgtcgccgccg 81350
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 4367 tcgtcgtcgtcgccgccggc 4386
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 19439 tgtcgtcgtcgtcgccgccg 19458
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagc 71 |||||||||||||||| ||||||| Sbjct: 71116 gtcgtcgtcgtcgccggcggcagc 71093
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 100199 tgtcgtcgtcgtcgccgccg 100218
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 85045 tcgtcgtcgtcgccgccggc 85026
>dbj|AK120526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127B22, full insert sequence Length = 2156 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 131 gtcgtcgtcgtcgccgccgg 150
>dbj|AK111454.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-C02, full insert sequence Length = 1569 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 390 tgtcgtcgtcgtcgccgccg 409
>dbj|AK111176.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F03, full insert sequence Length = 2733 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 166 gtcgtcgtcgtcgccgccgg 185
>dbj|AK110196.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-B01, full insert sequence Length = 3070 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 2442 tgtcgtcgtcgtcgccgccg 2423
>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79554 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 44747 gtcgtcgtcgtcgccgccgg 44728
>dbj|AK108587.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B03, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 490 gtcgtcgtcgtcgccgccgg 471
>dbj|AK108375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D12, full insert sequence Length = 884 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gtcgtcgtcgtcgccgccggcagc 71 |||||||||||||||| ||||||| Sbjct: 302 gtcgtcgtcgtcgccggcggcagc 279
>dbj|AK107169.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F12, full insert sequence Length = 2424 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtcgtcgtcgtcgccgccgg 67 |||||||||||||||||||| Sbjct: 301 gtcgtcgtcgtcgccgccgg 320
>dbj|AK102516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095L01, full insert sequence Length = 906 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 464 tgtcgtcgtcgtcgccgccg 445
>dbj|AK101954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075J17, full insert sequence Length = 2106 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tcgtcgtcgtcgccgccggc 68 |||||||||||||||||||| Sbjct: 70 tcgtcgtcgtcgccgccggc 51
>gb|AF030187.1|HSGPC4P1 Homo sapiens K-glypican precursor (GPC4) gene, exon 1 Length = 926 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 331 ctcctccgcctgctcgcctc 350
>dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F23, full insert sequence Length = 629 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 74 cgccaccgccgcccccgagatggccccg 101
>dbj|AK068854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170J18, full insert sequence Length = 1328 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 259 tgtcgtcgtcgtcgccgccg 278
>dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154N05, full insert sequence Length = 619 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 64 cgccaccgccgcccccgagatggccccg 91
>dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B04, full insert sequence Length = 620 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 cgccaccgccgccccggagatgtccccg 105 ||||||||||||||| |||||| ||||| Sbjct: 63 cgccaccgccgcccccgagatggccccg 90
>gb|AF030186.1|AF030186 Homo sapiens glypican-4 (GPC4) mRNA, complete cds Length = 3724 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ctcctccgcctgctcgcctc 302 |||||||||||||||||||| Sbjct: 59 ctcctccgcctgctcgcctc 78
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 ctggtgccctcggcgccctccggc 402 ||||||||||||| |||||||||| Sbjct: 1748149 ctggtgccctcggagccctccggc 1748172
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccgccaccgccgccccggag 96 |||||||||||||||||||| Sbjct: 203250 ccgccaccgccgccccggag 203231
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgtcgtcgtcgtcgccgccg 66 |||||||||||||||||||| Sbjct: 16011200 tgtcgtcgtcgtcgccgccg 16011219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,463,561 Number of Sequences: 3902068 Number of extensions: 3463561 Number of successful extensions: 119869 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112172 Number of HSP's gapped (non-prelim): 7678 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
