Clone Name | bart42c07 |
---|---|
Clone Library Name | barley_pub |
>AFR_ARATH (Q8LAW2) Protein AFR (Protein ATTENUATED FAR-RED RESPONSE)| Length = 372 Score = 34.7 bits (78), Expect = 0.069 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 98 LIPGMPDDVAVDCLARVPHGSYRSMRRVCRGWRSAAAAPEF 220 LI G+P+D+A CL R+P+ + R V W P F Sbjct: 28 LISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRF 68
>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel| gene 3 protein) Length = 836 Score = 31.6 bits (70), Expect = 0.58 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -1 Query: 159 DPCGTRARQSTATSSGIPGMRSTWSASHPWT--RLFGFIIA 43 D CG + T S +P S WSASHP + ++ G+I++ Sbjct: 304 DICGGSELDAVKTDSSLPSPSSLWSASHPSSSKKMDGYILS 344
>DACT1_MOUSE (Q8R4A3) Dapper homolog 1 (MDpr1) (Frodo) (Thymus-expressed novel| gene 3 protein) Length = 778 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -1 Query: 159 DPCGTRARQSTATSSGIPGMRSTWSASHPWT--RLFGFIIA 43 D C +T T + +P S WSASHP + ++ G+I++ Sbjct: 260 DICIGSELNATKTDNSLPSPSSLWSASHPASSKKMDGYILS 300
>GCH11_PSEPK (Q88LV4) GTP cyclohydrolase I 1 (EC 3.5.4.16) (GTP-CH-I 1)| Length = 190 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/46 (23%), Positives = 26/46 (56%) Frame = +2 Query: 56 PKSRVQGWEADHVDLIPGMPDDVAVDCLARVPHGSYRSMRRVCRGW 193 P R E ++ +++ + +DV+ + L P + ++M+ +CRG+ Sbjct: 5 PTGRSMSLEQNYTEILSQIGEDVSREGLLDTPKRAAKAMKYLCRGY 50
>STK23_MOUSE (Q9Z0G2) Serine/threonine-protein kinase 23 (EC 2.7.11.1)| (Muscle-specific serine kinase 1) (MSSK-1) Length = 565 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -1 Query: 156 PCGTRARQSTATSSGIPGMRSTWSASHPWTRLFGFIIAGEKCEL 25 P GTRA S A+SS +PG + S S + G + + C + Sbjct: 320 PEGTRAGPSPASSSPVPGGERSLSPSSQTSGFSGSLFSTASCSI 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.307 0.130 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,338,892 Number of Sequences: 219361 Number of extensions: 382436 Number of successful extensions: 1235 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1235 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)