ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart42c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 145 7e-32
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 145 7e-32
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 145 7e-32
4ref|XM_466267.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-06
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
6dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
7emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 48 0.012
8ref|XM_852171.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.18
9ref|XM_843737.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.18
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.72
11gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.72
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.72
13dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.72
14dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.72
15dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.72
16ref|XM_480271.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.8
17ref|XM_473255.1| Oryza sativa (japonica cultivar-group), predic... 40 2.8
18gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 2.8
19gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Canc... 40 2.8
20emb|CR610566.1| full-length cDNA clone CS0DI007YH13 of Placenta ... 40 2.8
21gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, comple... 40 2.8
22ref|XM_940745.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 2.8
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
26gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced prot... 40 2.8
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.8
28ref|XM_575626.1| PREDICTED: Rattus norvegicus similar to 60S rib... 40 2.8
29gb|BC040037.1| Homo sapiens, Similar to RIKEN cDNA 5133400G04 ge... 40 2.8
30dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
31dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
32dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 2.8
33gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 1... 40 2.8
34dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 2.8
35dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 2.8
36dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcripti... 40 2.8
37dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcripti... 40 2.8
38dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
39dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
40gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q... 40 2.8
41dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.8
42emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 40 2.8
43dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptiona... 40 2.8
44gb|M94890.1|HUMPSBG11 Human pregnancy-specific beta-1-glycoprote... 40 2.8 
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  145 bits (73), Expect = 7e-32
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                         
Query: 89    cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 148
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                                                                  
Query: 149   ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgc 201
             ||||||||  |  ||||  ||||||| |||||||||||||| ||| |||||||
Sbjct: 18341 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgc 18393
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  145 bits (73), Expect = 7e-32
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                           
Query: 89      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 148
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                                                                    
Query: 149     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgc 201
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| |||||||
Sbjct: 7798614 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgc 7798562
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  145 bits (73), Expect = 7e-32
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                           
Query: 89      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 148
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                                                                    
Query: 149     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgc 201
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| |||||||
Sbjct: 7868701 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgc 7868649
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>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 98  ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 157
           |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 129

                                                 
Query: 158 tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 195
           ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 130 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 167
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                            
Query: 98       ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 157
                |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 21385136

                                                      
Query: 158      tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 195
                ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 21385137 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 21385174
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 98    ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 157
             |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 45089

                                                   
Query: 158   tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 195
             ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 45090 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 45127
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>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 41    ccagctatgatgaaaccaaagagc 64
             ||||||||||||||||||||||||
Sbjct: 15356 ccagctatgatgaaaccaaagagc 15379
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>ref|XM_852171.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 4 (LOC476516), mRNA
          Length = 1957

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 193 gcggagcgccgccgccgccccg 214
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>ref|XM_843737.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 3 (LOC476516), mRNA
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 193 gcggagcgccgccgccgccccg 214
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 162      accgctcgatgcgccgcgtgt 182
                |||||||||||||||||||||
Sbjct: 10557369 accgctcgatgcgccgcgtgt 10557349
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>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 162    accgctcgatgcgccgcgtgt 182
              |||||||||||||||||||||
Sbjct: 113182 accgctcgatgcgccgcgtgt 113162
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 162      accgctcgatgcgccgcgtgt 182
                |||||||||||||||||||||
Sbjct: 10555470 accgctcgatgcgccgcgtgt 10555450
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>dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H10, full
            insert sequence
          Length = 1850

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  accgctcgatgcgccgcgtgt 182
            |||||||||||||||||||||
Sbjct: 1226 accgctcgatgcgccgcgtgt 1206
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>dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D07, full
            insert sequence
          Length = 2009

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  accgctcgatgcgccgcgtgt 182
            |||||||||||||||||||||
Sbjct: 1397 accgctcgatgcgccgcgtgt 1377
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>dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G08, full
           insert sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 accgctcgatgcgccgcgtgt 182
           |||||||||||||||||||||
Sbjct: 248 accgctcgatgcgccgcgtgt 228
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>ref|XM_480271.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 ggcggagcgccgccgccgcc 211
           ||||||||||||||||||||
Sbjct: 356 ggcggagcgccgccgccgcc 337
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>ref|XM_473255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 gagcgccgccgccgccccgg 215
           ||||||||||||||||||||
Sbjct: 120 gagcgccgccgccgccccgg 101
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    ggctggcggagcgccgccgccgcc 211
              ||||||||||||| ||||||||||
Sbjct: 105617 ggctggcggagcgacgccgccgcc 105640
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>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 182933

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    gctcacacttttccccagctatga 50
             |||| |||||||||||||||||||
Sbjct: 83116 gctctcacttttccccagctatga 83093
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>emb|CR610566.1| full-length cDNA clone CS0DI007YH13 of Placenta Cot 25-normalized
          of Homo sapiens (human)
          Length = 3066

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 5  tggatccagaagcagcagca 24
          ||||||||||||||||||||
Sbjct: 83 tggatccagaagcagcagca 64
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>gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, complete sequence
          Length = 160494

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      ggatccagaagcagcagcaaagct 29
              ||||||||||||||||| ||||||
Sbjct: 119446 ggatccagaagcagcaggaaagct 119423
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>ref|XM_940745.1| PREDICTED: Homo sapiens hypothetical protein LOC202051, transcript
           variant 3 (LOC202051), mRNA
          Length = 649

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   ggatccagaagcagcagcaaagct 29
           ||||||||||||||||| ||||||
Sbjct: 513 ggatccagaagcagcaggaaagct 536
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 196      gagcgccgccgccgccccgg 215
                ||||||||||||||||||||
Sbjct: 26369656 gagcgccgccgccgccccgg 26369637
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     ggcggagcgccgccgccgcc 211
               ||||||||||||||||||||
Sbjct: 4005382 ggcggagcgccgccgccgcc 4005363
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 199      cgccgccgccgccccggagttcgc 222
                |||||||||||| |||||||||||
Sbjct: 27926370 cgccgccgccgcgccggagttcgc 27926393
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>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 ccgacgacgtcgccgtcgac 133
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 201     ccgccgccgccccggagttc 220
               ||||||||||||||||||||
Sbjct: 4061183 ccgccgccgccccggagttc 4061164
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>ref|XM_575626.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L13
           (LOC500276), mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  aagctcacacttttccccag 44
           ||||||||||||||||||||
Sbjct: 355 aagctcacacttttccccag 374
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>gb|BC040037.1| Homo sapiens, Similar to RIKEN cDNA 5133400G04 gene, clone
           IMAGE:6155722, mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   ggatccagaagcagcagcaaagct 29
           ||||||||||||||||| ||||||
Sbjct: 516 ggatccagaagcagcaggaaagct 539
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>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   cgccgccgccgccccggagttcgc 222
             |||||||||||| |||||||||||
Sbjct: 89728 cgccgccgccgcgccggagttcgc 89751
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   cgccgccgccgccccggagttcgc 222
             |||||||||||| |||||||||||
Sbjct: 15704 cgccgccgccgcgccggagttcgc 15727
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     ggatgcccgacgacgtcgcc 127
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395
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>gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 17 of 32 of the
            complete genome
          Length = 10091

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  cggctggcggagcgccgccg 206
            ||||||||||||||||||||
Sbjct: 4952 cggctggcggagcgccgccg 4933
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>dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
             seed, ivory seed-variegation (ivs-v) mutant alele
          Length = 13370

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   ctggcggagcgccgccgccg 209
             ||||||||||||||||||||
Sbjct: 10337 ctggcggagcgccgccgccg 10356
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>dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
            seed, complete cds
          Length = 10104

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  ctggcggagcgccgccgccg 209
            ||||||||||||||||||||
Sbjct: 7072 ctggcggagcgccgccgccg 7091
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>dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2387

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  ctggcggagcgccgccgccg 209
            ||||||||||||||||||||
Sbjct: 1609 ctggcggagcgccgccgccg 1628
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>dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2314

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  ctggcggagcgccgccgccg 209
            ||||||||||||||||||||
Sbjct: 1567 ctggcggagcgccgccgccg 1586
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>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ggcggagcgccgccgccgcc 211
             ||||||||||||||||||||
Sbjct: 92679 ggcggagcgccgccgccgcc 92660
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>dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E06, full
           insert sequence
          Length = 811

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 cgccgccgccgccccggagttcgc 222
           |||||||||||| |||||||||||
Sbjct: 55  cgccgccgccgcgccggagttcgc 78
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>gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q32-q34, complete sequence
          Length = 127447

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tggatccagaagcagcagca 24
             ||||||||||||||||||||
Sbjct: 10131 tggatccagaagcagcagca 10112
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>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full
           insert sequence
          Length = 2455

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 gagcgccgccgccgccccgg 215
           ||||||||||||||||||||
Sbjct: 304 gagcgccgccgccgccccgg 285
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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   gagcgccgccgccgccccgg 215
             ||||||||||||||||||||
Sbjct: 10289 gagcgccgccgccgccccgg 10270
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>dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptional factor, complete
            cds, strain:TKS
          Length = 2309

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  ctggcggagcgccgccgccg 209
            ||||||||||||||||||||
Sbjct: 1590 ctggcggagcgccgccgccg 1609
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>gb|M94890.1|HUMPSBG11 Human pregnancy-specific beta-1-glycoprotein 11 (PSG11) mRNA,
            complete cds
          Length = 2070

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   aagctcacacttttccccag 44
            ||||||||||||||||||||
Sbjct: 1431 aagctcacacttttccccag 1450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,593,239
Number of Sequences: 3902068
Number of extensions: 2593239
Number of successful extensions: 367106
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 361572
Number of HSP's gapped (non-prelim): 5531
length of query: 222
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 200
effective length of database: 17,147,199,772
effective search space: 3429439954400
effective search space used: 3429439954400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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