ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart42c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104474.1| Zea mays PCO112790 mRNA sequence 230 4e-57
2gb|BT018691.1| Zea mays clone EL01N0512C10.d mRNA sequence 228 1e-56
3emb|X99517.1|ZMEIF5 Z.mays mRNA for eukaryotic initiation factor-5 228 1e-56
4emb|AJ132240.1|ZMA132240 Zea mays eIF-5 gene, exons 1-2 228 1e-56
5ref|XM_450544.1| Oryza sativa (japonica cultivar-group), mRNA 167 5e-38
6ref|XM_506649.1| PREDICTED Oryza sativa (japonica cultivar-group... 167 5e-38
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
8dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
9dbj|AK098857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
10dbj|AK067685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
11dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
12gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete s... 127 4e-26
13ref|NM_103340.2| Arabidopsis thaliana translation initiation fac... 90 9e-15
14gb|AY064061.1| Arabidopsis thaliana putative Eukaryotic translat... 90 9e-15
15gb|AY056208.1| Arabidopsis thaliana putative eukaryotic translat... 90 9e-15
16gb|AC025782.7|AC025782 Arabidopsis thaliana chromosome 1 BAC T15... 90 9e-15
17gb|L47221.1|PHVEIF Phaseolus vulgaris eukaryotic initiation fact... 88 3e-14
18gb|BT012775.1| Lycopersicon esculentum clone 113754R, mRNA sequence 84 5e-13
19gb|AY096371.1| Arabidopsis thaliana putative eukaryotic translat... 82 2e-12
20ref|NM_106433.3| Arabidopsis thaliana translation initiation fac... 76 1e-10
21gb|AY114664.1| Arabidopsis thaliana putative eukaryotic translat... 76 1e-10
22gb|AY065097.1| Arabidopsis thaliana putative eukaryotic translat... 76 1e-10
23gb|AY062694.1| Arabidopsis thaliana putative eukaryotic translat... 76 1e-10
24gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32... 76 1e-10
25gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana... 76 1e-10
26gb|BT002163.1| Arabidopsis thaliana putative eukaryotic translat... 76 1e-10
27dbj|AP004973.1| Lotus japonicus genomic DNA, chromosome 3, clone... 48 0.030
28gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Can... 42 1.9
29emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chr... 42 1.9
30gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 7.3 
>gb|AY104474.1| Zea mays PCO112790 mRNA sequence
          Length = 2008

 Score =  230 bits (116), Expect = 4e-57
 Identities = 146/156 (93%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 394 caagatggcgctgcaaaacattggtgcttcaaacagggatgatgccttctacaggtacaa 453

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||||||| | ||||| || ||||| ||||||||||| |||||||| ||| ||||
Sbjct: 454 gatgcccagaatgattaccaagatagaaggccgtggtaatggtatcaagacaaatgttgt 513

                                               
Query: 503 gaacatggttgacatagcaaaagcacttgccaggcc 538
           ||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaacatggttgacatagcaaaagcacttgccaggcc 549



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 186 ggattgctgggagagtactctcgtgcaacgagaaaaaggca 226
           |||||| |||||||||||||||||||||| || ||||||||
Sbjct: 191 ggattgttgggagagtactctcgtgcaactaggaaaaggca 231



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 88  aggtagcagcatctgttttgctgcaatctgacaaagtggagggct 132
           ||||||||| | ||||| ||||||| |||||||||||||||||||
Sbjct: 99  aggtagcagaaactgttctgctgcagtctgacaaagtggagggct 143
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>gb|BT018691.1| Zea mays clone EL01N0512C10.d mRNA sequence
          Length = 1992

 Score =  228 bits (115), Expect = 1e-56
 Identities = 148/159 (93%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 387 caagatggcgctgcaaaacattggtgcttcaaacagggatgatgccttctacaggtacaa 446

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||||||| | || || || ||||| ||||||||||| |||||||| ||| ||||
Sbjct: 447 gatgcccagaatgattactaagatagaaggccgtggtaatggtatcaagacaaatgttgt 506

                                                  
Query: 503 gaacatggttgacatagcaaaagcacttgccaggccagc 541
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaacatggttgacatagcaaaagcacttgccaggccagc 545



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 186 ggattgctgggagagtactctcgtgcaacgagaaaaaggcataagtttgtgctcccctgc 245
           |||||| ||||||||||||||||||||||||| |||||||| ||| ||  |  || ||||
Sbjct: 184 ggattgttgggagagtactctcgtgcaacgaggaaaaggcacaaggttccgtcccactgc 243

                         
Query: 246 atgcatcaagagcc 259
           |||| |||||||||
Sbjct: 244 atgcgtcaagagcc 257



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 88  aggtagcagcatctgttttgctgcaatctgacaaagtggagggct 132
           ||||||||| | ||||| ||||||| |||||||||||||||||||
Sbjct: 92  aggtagcagaaactgttctgctgcagtctgacaaagtggagggct 136
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>emb|X99517.1|ZMEIF5 Z.mays mRNA for eukaryotic initiation factor-5
          Length = 1975

 Score =  228 bits (115), Expect = 1e-56
 Identities = 148/159 (93%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 342 caagatggcgctgcaaaacattggtgcttcaaacagggatgatgccttctacaggtacaa 401

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||||||| | || || || ||||| ||||||||||| |||||||| ||| ||||
Sbjct: 402 gatgcccagaatgattactaagatagaaggccgtggtaatggtatcaagacaaatgttgt 461

                                                  
Query: 503 gaacatggttgacatagcaaaagcacttgccaggccagc 541
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaacatggttgacatagcaaaagcacttgccaggccagc 500



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 186 ggattgctgggagagtactctcgtgcaacgagaaaaaggcataagtttgtgctcccctgc 245
           |||||| ||||||||||||||||||||||||| |||||||| ||| ||  |  || ||||
Sbjct: 139 ggattgttgggagagtactctcgtgcaacgaggaaaaggcacaaggttccgtcccactgc 198

                         
Query: 246 atgcatcaagagcc 259
           |||| |||||||||
Sbjct: 199 atgcgtcaagagcc 212



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 88  aggtagcagcatctgttttgctgcaatctgacaaagtggagggct 132
           ||||||||| | ||||| ||||||| |||||||||||||||||||
Sbjct: 47  aggtagcagaaactgttctgctgcagtctgacaaagtggagggct 91
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>emb|AJ132240.1|ZMA132240 Zea mays eIF-5 gene, exons 1-2
          Length = 6831

 Score =  228 bits (115), Expect = 1e-56
 Identities = 148/159 (93%)
 Strand = Plus / Plus

                                                                        
Query: 383  caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
            |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 3541 caagatggcgctgcaaaacattggtgcttcaaacagggatgatgccttctacaggtacaa 3600

                                                                        
Query: 443  gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
            ||||||||||||| | || || || ||||| ||||||||||| |||||||| ||| ||||
Sbjct: 3601 gatgcccagaatgattactaagatagaaggccgtggtaatggtatcaagacaaatgttgt 3660

                                                   
Query: 503  gaacatggttgacatagcaaaagcacttgccaggccagc 541
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 gaacatggttgacatagcaaaagcacttgccaggccagc 3699



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                        
Query: 186  ggattgctgggagagtactctcgtgcaacgagaaaaaggcataagtttgtgctcccctgc 245
            |||||| ||||||||||||||||||||||||| |||||||| ||| ||  |  || ||||
Sbjct: 3338 ggattgttgggagagtactctcgtgcaacgaggaaaaggcacaaggttccgtcccactgc 3397

                          
Query: 246  atgcatcaagagcc 259
            |||| |||||||||
Sbjct: 3398 atgcgtcaagagcc 3411



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 88   aggtagcagcatctgttttgctgcaatctgacaaagtggagggct 132
            ||||||||| | ||||| ||||||| |||||||||||||||||||
Sbjct: 3246 aggtagcagaaactgttctgctgcagtctgacaaagtggagggct 3290
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>ref|XM_450544.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2008

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 408 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 467

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 468 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 527

                                               
Query: 503 gaacatggttgacatagcaaaagcacttgccaggcc 538
           ||||||||| || ||||||||||| || ||||||||
Sbjct: 528 gaacatggtggatatagcaaaagccctagccaggcc 563



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
           |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 151 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 210

                                                                       
Query: 154 ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
           |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 211 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 270

                        
Query: 214 cgagaaaaaggca 226
           |||||||||||||
Sbjct: 271 cgagaaaaaggca 283
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>ref|XM_506649.1| PREDICTED Oryza sativa (japonica cultivar-group), P0706E03.4-1 mRNA
          Length = 2011

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 411 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 470

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 471 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 530

                                               
Query: 503 gaacatggttgacatagcaaaagcacttgccaggcc 538
           ||||||||| || ||||||||||| || ||||||||
Sbjct: 531 gaacatggtggatatagcaaaagccctagccaggcc 566



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
           |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 154 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 213

                                                                       
Query: 154 ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
           |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 214 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 273

                        
Query: 214 cgagaaaaaggca 226
           |||||||||||||
Sbjct: 274 cgagaaaaaggca 286
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                           
Query: 383     caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
               ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 9583554 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 9583613

                                                                           
Query: 443     gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
               ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 9583614 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 9583673

                                                   
Query: 503     gaacatggttgacatagcaaaagcacttgccaggcc 538
               ||||||||| || ||||||||||| || ||||||||
Sbjct: 9583674 gaacatggtggatatagcaaaagccctagccaggcc 9583709



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                           
Query: 97      catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
               |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 9583297 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 9583356

                                                                           
Query: 154     ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
               |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 9583357 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 9583416

                            
Query: 214     cgagaaaaaggca 226
               |||||||||||||
Sbjct: 9583417 cgagaaaaaggca 9583429
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                         
Query: 383   caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
             ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 23651 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 23710

                                                                         
Query: 443   gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
             ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 23711 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 23770

                                                 
Query: 503   gaacatggttgacatagcaaaagcacttgccaggcc 538
             ||||||||| || ||||||||||| || ||||||||
Sbjct: 23771 gaacatggtggatatagcaaaagccctagccaggcc 23806



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                         
Query: 97    catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
             |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 23394 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 23453

                                                                         
Query: 154   ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
             |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 23454 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 23513

                          
Query: 214   cgagaaaaaggca 226
             |||||||||||||
Sbjct: 23514 cgagaaaaaggca 23526
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>dbj|AK098857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L01, full
           insert sequence
          Length = 2008

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 408 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 467

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 468 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 527

                                               
Query: 503 gaacatggttgacatagcaaaagcacttgccaggcc 538
           ||||||||| || ||||||||||| || ||||||||
Sbjct: 528 gaacatggtggatatagcaaaagccctagccaggcc 563



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
           |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 151 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 210

                                                                       
Query: 154 ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
           |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 211 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 270

                        
Query: 214 cgagaaaaaggca 226
           |||||||||||||
Sbjct: 271 cgagaaaaaggca 283
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>dbj|AK067685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G06, full
           insert sequence
          Length = 2010

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
           ||||||||| |||||||||||||||||||| |||   |||||||||||||||||||| ||
Sbjct: 410 caagatggctctgcaaaacattggtgcttcaaaccgtgatgatgccttctacaggtataa 469

                                                                       
Query: 443 gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
           ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 470 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacattgt 529

                                               
Query: 503 gaacatggttgacatagcaaaagcacttgccaggcc 538
           ||||||||| || ||||||||||| || ||||||||
Sbjct: 530 gaacatggtggatatagcaaaagccctagccaggcc 565



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 114/133 (85%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  catctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttcttttatgt 153
           |||| |||| |||||||||||||||||||||||| |||   | |||| ||||||||||||
Sbjct: 153 catcagtttcgctgcaatctgacaaagtggagggtctaaaagttgaagcttcttttatgt 212

                                                                       
Query: 154 ctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgtgcaa 213
           |||||||||  | | | || |||||||||||||||||||| ||||| || |||||  |||
Sbjct: 213 ctgaacaagacttgctttacttgggatcagttggattgcttggagaatattctcggacaa 272

                        
Query: 214 cgagaaaaaggca 226
           |||||||||||||
Sbjct: 273 cgagaaaaaggca 285
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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0545E05
          Length = 163229

 Score =  143 bits (72), Expect = 7e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                         
Query: 383   caagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaa 442
             ||||||||| |||||||||||||||||||| |||   |||||||| ||||||||||| ||
Sbjct: 28001 caagatggctctgcaaaacattggtgcttcaaaccgcgatgatgctttctacaggtataa 27942

                                                                         
Query: 443   gatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgt 502
             ||||||||| ||| | |||||||| ||||| ||||| |||||||||||||| || || ||
Sbjct: 27941 gatgcccaggatgatcaccaaaatagaaggccgtggcaatggcatcaagactaacatcgt 27882

                                     
Query: 503   gaacatggttgacatagcaaaagc 526
             ||||||||| || |||||||||||
Sbjct: 27881 gaacatggtggatatagcaaaagc 27858



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/137 (84%), Gaps = 6/137 (4%)
 Strand = Plus / Minus

                                                                         
Query: 93    gcagcatctgttttgctgcaatctgacaaagtggaggg-ctac--gctgaaccttctttt 149
             |||||||| ||||||||||||||||||||||||||||| |||   | |||| ||||||||
Sbjct: 28309 gcagcatcagttttgctgcaatctgacaaagtggagggtctaaaagttgaagcttctttt 28250

                                                                         
Query: 150   atgtctgaacaagcatcggtctatttgggatcagttggattgctgggagagtactctcgt 209
             |||||||||||||  | | | || ||||||||||||||||| || ||||| || ||||| 
Sbjct: 28249 atgtctgaacaagacttgctttacttgggatcagttggattacttggagaatattctcgg 28190

                              
Query: 210   gcaacgagaaaaaggca 226
                ||||||||||||||
Sbjct: 28189 ---acgagaaaaaggca 28176
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>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence
          Length = 123953

 Score =  127 bits (64), Expect = 4e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                        
Query: 399  aacattggtgcttccaacaaggatgatgccttctacaggtacaagatgcccagaatgctg 458
            ||||||||||||  |||||  ||||||||||||||||||||||||||||| |||||| | 
Sbjct: 6136 aacattggtgctggcaacagcgatgatgccttctacaggtacaagatgcctagaatgatt 6077

                                                                        
Query: 459  accaaaattgaaggacgtggtaatggcatcaagaccaatattgtgaacatggttgacata 518
            ||||||||||| ||  | |||||||||||||| || |||||||| ||||||||||| || 
Sbjct: 6076 accaaaattgagggcagaggtaatggcatcaaaacgaatattgtcaacatggttgatatt 6017

                    
Query: 519  gcaaaagc 526
            ||||||||
Sbjct: 6016 gcaaaagc 6009
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>ref|NM_103340.2| Arabidopsis thaliana translation initiation factor AT1G36730 mRNA,
           complete cds
          Length = 2268

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcaagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtaca 441
           ||||||||||  |||||||||||||||| ||||||   ||||||||||| || ||||| |
Sbjct: 448 tcaagatggctttgcaaaacattggtgcctccaaccgcgatgatgccttttataggtata 507

                                                                       
Query: 442 agatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattg 501
           ||||||| || ||| ||||||| ||||||||  | ||||| || |||||||| ||| | |
Sbjct: 508 agatgccgaggatgatgaccaagattgaaggtagaggtaacggtatcaagactaatgtgg 567

                        
Query: 502 tgaacatggttga 514
           | |||||||||||
Sbjct: 568 ttaacatggttga 580
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>gb|AY064061.1| Arabidopsis thaliana putative Eukaryotic translation initiation
           factor 5 (At1g36730) mRNA, complete cds
          Length = 2213

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcaagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtaca 441
           ||||||||||  |||||||||||||||| ||||||   ||||||||||| || ||||| |
Sbjct: 374 tcaagatggctttgcaaaacattggtgcctccaaccgcgatgatgccttttataggtata 433

                                                                       
Query: 442 agatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattg 501
           ||||||| || ||| ||||||| ||||||||  | ||||| || |||||||| ||| | |
Sbjct: 434 agatgccgaggatgatgaccaagattgaaggtagaggtaacggtatcaagactaatgtgg 493

                        
Query: 502 tgaacatggttga 514
           | |||||||||||
Sbjct: 494 ttaacatggttga 506
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>gb|AY056208.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 (At1g36730) mRNA, complete cds
          Length = 2053

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcaagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtaca 441
           ||||||||||  |||||||||||||||| ||||||   ||||||||||| || ||||| |
Sbjct: 374 tcaagatggctttgcaaaacattggtgcctccaaccgcgatgatgccttttataggtata 433

                                                                       
Query: 442 agatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattg 501
           ||||||| || ||| ||||||| ||||||||  | ||||| || |||||||| ||| | |
Sbjct: 434 agatgccgaggatgatgaccaagattgaaggtagaggtaacggtatcaagactaatgtgg 493

                        
Query: 502 tgaacatggttga 514
           | |||||||||||
Sbjct: 494 ttaacatggttga 506
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>gb|AC025782.7|AC025782 Arabidopsis thaliana chromosome 1 BAC T15P17 genomic sequence, complete
             sequence
          Length = 97899

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                         
Query: 382   tcaagatggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtaca 441
             ||||||||||  |||||||||||||||| ||||||   ||||||||||| || ||||| |
Sbjct: 75252 tcaagatggctttgcaaaacattggtgcctccaaccgcgatgatgccttttataggtata 75193

                                                                         
Query: 442   agatgcccagaatgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattg 501
             ||||||| || ||| ||||||| ||||||||  | ||||| || |||||||| ||| | |
Sbjct: 75192 agatgccgaggatgatgaccaagattgaaggtagaggtaacggtatcaagactaatgtgg 75133

                          
Query: 502   tgaacatggttga 514
             | |||||||||||
Sbjct: 75132 ttaacatggttga 75120
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>gb|L47221.1|PHVEIF Phaseolus vulgaris eukaryotic initiation factor 5 (eIF-5) gene,
           complete cds
          Length = 1688

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                       
Query: 399 aacattggtgcttccaacaaggatgatgccttctacaggtacaagatgcccagaatgctg 458
           ||||||||||||   ||||  |||||||||||||||||||||||||||||  ||||| | 
Sbjct: 101 aacattggtgctggaaacagcgatgatgccttctacaggtacaagatgcctcgaatggtc 160

                                                                   
Query: 459 accaaaattgaaggacgtggtaatggcatcaagaccaatattgtgaacatggttga 514
           ||||||||||| ||  | |||||||||||||| || ||| |||| || ||||||||
Sbjct: 161 accaaaattgagggcagaggtaatggcatcaaaacaaatgttgtcaatatggttga 216
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>gb|BT012775.1| Lycopersicon esculentum clone 113754R, mRNA sequence
          Length = 1918

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 394 tgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatgcccagaa 453
           |||||||||| |||||   |||||  |||||||| ||||||||||| ||||||||||| |
Sbjct: 419 tgcaaaacataggtgccagcaacagagatgatgctttctacaggtataagatgcccagga 478

                                                                       
Query: 454 tgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgtgaacatggttg 513
           |||| ||||| || || || ||||| ||||| ||||| || ||| | |||||||||||||
Sbjct: 479 tgcttaccaagatagagggccgtgggaatggtatcaaaacaaatgtggtgaacatggttg 538

                         
Query: 514 acatagcaaaagca 527
           | || || ||||||
Sbjct: 539 atattgccaaagca 552



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 59/67 (88%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                       
Query: 137 tgaaccttcttttatgtctgaacaagc-atcggtctatttgggatcagttggattgctgg 195
           |||| ||||||||||||| |||||||| |||  |||||||||||||  |||||||||| |
Sbjct: 157 tgaaacttcttttatgtccgaacaagccatct-tctatttgggatccattggattgcttg 215

                  
Query: 196 gagagta 202
           |||||||
Sbjct: 216 gagagta 222
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>gb|AY096371.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 protein (At1g36730) mRNA, complete cds
          Length = 1351

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                       
Query: 394 tgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatgcccagaa 453
           |||||||||||||||| ||||||   ||||||||||| || ||||| |||||||| || |
Sbjct: 8   tgcaaaacattggtgcctccaaccgcgatgatgccttttataggtataagatgccgagga 67

                                                                       
Query: 454 tgctgaccaaaattgaaggacgtggtaatggcatcaagaccaatattgtgaacatggttg 513
           || ||||||| ||||||||  | ||||| || |||||||| ||| | || ||||||||||
Sbjct: 68  tgatgaccaagattgaaggtagaggtaacggtatcaagactaatgtggttaacatggttg 127

            
Query: 514 a 514
           |
Sbjct: 128 a 128
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>ref|NM_106433.3| Arabidopsis thaliana translation initiation factor AT1G77840 mRNA,
           complete cds
          Length = 1788

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 387 atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
           ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 289 atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 348

             
Query: 447 cc 448
           ||
Sbjct: 349 cc 350
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>gb|AY114664.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 (At1g77840) mRNA, complete cds
          Length = 1348

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 387 atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
           ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 1   atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 60

             
Query: 447 cc 448
           ||
Sbjct: 61  cc 62
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>gb|AY065097.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 (At1g77840; T32E8.15) mRNA, complete cds
          Length = 1770

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 387 atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
           ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 289 atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 348

             
Query: 447 cc 448
           ||
Sbjct: 349 cc 350
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>gb|AY062694.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 (At1g77840; T32E8.15) mRNA, complete cds
          Length = 1784

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 387 atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
           ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 286 atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 345

             
Query: 447 cc 448
           ||
Sbjct: 346 cc 347
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>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete
             sequence
          Length = 82454

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 387   atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
             ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 76444 atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 76503

               
Query: 447   cc 448
             ||
Sbjct: 76504 cc 76505
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>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I,
             complete sequence
          Length = 110565

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 387   atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
             ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 12352 atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 12411

               
Query: 447   cc 448
             ||
Sbjct: 12412 cc 12413
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>gb|BT002163.1| Arabidopsis thaliana putative eukaryotic translation initiation
           factor 5 (At1g77840) mRNA, complete cds
          Length = 1348

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 387 atggcgctgcaaaacattggtgcttccaacaaggatgatgccttctacaggtacaagatg 446
           ||||||||||| ||||||||||||||||||    | ||||||||||||||||||||||||
Sbjct: 1   atggcgctgcagaacattggtgcttccaaccgtaacgatgccttctacaggtacaagatg 60

             
Query: 447 cc 448
           ||
Sbjct: 61  cc 62
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>dbj|AP004973.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155b,
             complete sequence
          Length = 52067

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 402   attggtgcttccaacaaggatgatgccttctacaggtacaagatgcccagaatgctgacc 461
             ||||||||| | ||||  |||||||||||||| ||||| ||||| || |||||| | || 
Sbjct: 11662 attggtgctgcaaacagtgatgatgccttctataggtataagattcctagaatgatcaca 11603

                     
Query: 462   aaaattga 469
             ||||||||
Sbjct: 11602 aaaattga 11595
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>gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55295

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   ttggtgcttccaacaaggatg 423
             |||||||||||||||||||||
Sbjct: 23437 ttggtgcttccaacaaggatg 23417
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>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete
             sequence
          Length = 171320

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   ggattgctgggagagtactct 206
             |||||||||||||||||||||
Sbjct: 17171 ggattgctgggagagtactct 17191
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 140     accttcttttatgtctgaac 159
               ||||||||||||||||||||
Sbjct: 1652140 accttcttttatgtctgaac 1652159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,269,158
Number of Sequences: 3902068
Number of extensions: 4269158
Number of successful extensions: 73537
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73413
Number of HSP's gapped (non-prelim): 109
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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