ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42b09 |
|---|---|
| Clone Library Name | barley_pub |
>PSD13_BOVIN (Q5E964) 26S proteasome non-ATPase regulatory subunit 13 (26S| proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 Score = 88.2 bits (217), Expect = 1e-17 Identities = 54/161 (33%), Positives = 88/161 (54%) Frame = +3 Query: 66 FLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFISD 245 FL+ S+ P A + L +LY +KLWHQLTL++ F+ GD LI+LY +FIS+ Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66 Query: 246 FESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIASF 425 FE ++N L + V RQ +D + +S+LE K+ + +E V+ K I + Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGAL 121 Query: 426 LLEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYYWLCSQ 548 L G+ + K+ +++ + L ++ V SVHS +Y L S+ Sbjct: 122 KLNIGDLQVTKETIEDVEEMLSNLPGV-TSVHSRFYDLSSK 161
>PSD13_MOUSE (Q9WVJ2) 26S proteasome non-ATPase regulatory subunit 13 (26S| proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 Score = 87.8 bits (216), Expect = 2e-17 Identities = 53/161 (32%), Positives = 89/161 (55%) Frame = +3 Query: 66 FLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFISD 245 FL+ S+ P A + L +LY +KLWHQLTL++ F+ GD LI+LY +FIS+ Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISE 66 Query: 246 FESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIASF 425 FE ++N L + V RQ +D + +++LE K+ + +E V+ K I + Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121 Query: 426 LLEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYYWLCSQ 548 L G+ + K+ +++ + L+++ V SVHS +Y L S+ Sbjct: 122 KLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSK 161
>PSD13_CHICK (P84169) 26S proteasome non-ATPase regulatory subunit 13 (26S| proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 Score = 87.8 bits (216), Expect = 2e-17 Identities = 54/161 (33%), Positives = 87/161 (54%) Frame = +3 Query: 66 FLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFISD 245 FL+ S P A + L +LY +KLWHQLTL++ F+ GD LI+LY +FIS+ Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66 Query: 246 FESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIASF 425 FE ++N L + V RQ +D +++LE K+ + +E V+ K I + Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121 Query: 426 LLEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYYWLCSQ 548 L G+ + K+ ++E + L+++ V SVHS +Y L S+ Sbjct: 122 KLNIGDLQVTKETIEEVEEMLNNLPGV-TSVHSRFYDLSSK 161
>PSD13_HUMAN (Q9UNM6) 26S proteasome non-ATPase regulatory subunit 13 (26S| proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) Length = 376 Score = 85.5 bits (210), Expect = 9e-17 Identities = 52/161 (32%), Positives = 88/161 (54%) Frame = +3 Query: 66 FLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFISD 245 FL+ S+ P + L +LY +KLWHQLTL++ F+ GD LI+LY +FIS+ Sbjct: 7 FLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66 Query: 246 FESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIASF 425 FE ++N L + V RQ +D + +++LE K+ + +E V+ K I + Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121 Query: 426 LLEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYYWLCSQ 548 L G+ + K+ +++ + L+++ V SVHS +Y L S+ Sbjct: 122 KLNIGDLQVTKETIEDVEEMLNNLPGV-TSVHSRFYDLSSK 161
>RPN9_SCHPO (Q9US13) Probable 26S proteasome regulatory subunit rpn9| Length = 381 Score = 70.1 bits (170), Expect = 4e-12 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 1/158 (0%) Frame = +3 Query: 63 EFLEAQGSTRPE-LAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFI 239 +FL Q + PE L + Y + DLY+RKLW QLT L F + + LYT+F+ Sbjct: 11 DFLHDQATRAPESLQQSYILMEDLYERKLWKQLTDALIVFFDTP--ETVPLRLPLYTNFV 68 Query: 240 SDFESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIA 419 + F IN LK + + S+ +A L + +++ E + ++ +Y + IA Sbjct: 69 NSFRPNINQLKAVYMGLKAFESCSNDEA----LRNLNQIVNELDEEKYKDAYVYSIVAIA 124 Query: 420 SFLLEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYY 533 L G E ++L+ + +D +D V+ +HS+YY Sbjct: 125 RIKLISGKLDEARELLVKASKIIDHIDYVESLIHSSYY 162
>RPN9_YEAST (Q04062) 26S proteasome regulatory subunit RPN9 (Proteasome| non-ATPase subunit 7) Length = 393 Score = 59.3 bits (142), Expect = 7e-09 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 8/160 (5%) Frame = +3 Query: 93 PELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQLYTHFISDFESKINLLK 272 P L + Y+ KLW QL+ L +F A ++ ++LY +F+S F KIN L Sbjct: 20 PSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA--KSTPLRLRLYDNFVSKFYDKINQLS 77 Query: 273 FAHFAVVVSRQYSDKDAGISYLEGVISKLH--DTKESRIE------EPVLYVKMQIASFL 428 + + + D D + YL+ + ++ D+K+ R + +L + +IA Sbjct: 78 VVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTY 137 Query: 429 LEKGNQKECKKLVDEGKTTLDSMDDVDPSVHSTYYWLCSQ 548 L K + + + L+D+ + TLD D + + +++Y SQ Sbjct: 138 LLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQ 177
>ECTB_STRCO (Q93RW1) Diaminobutyrate--2-oxoglutarate transaminase (EC 2.6.1.76)| (Diaminobutyrate--2-oxoglutarate aminotransferase) (L-2,4-diaminobutyric acid transaminase) (DABA aminotransferase) Length = 423 Score = 32.7 bits (73), Expect = 0.69 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +3 Query: 18 EGKGSGGDQAMAAPLEFLEAQGSTRPELAEWYAALADLYQRK 143 E +GSG ++ A +E ++ +G AEW ALADL +R+ Sbjct: 194 EDQGSGLNKPAAVIVETVQGEGGINVARAEWLRALADLCERQ 235
>RPOD_BORBU (P52323) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 631 Score = 32.0 bits (71), Expect = 1.2 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +3 Query: 318 DAGISYLEGVISKLHDTKESRIEEPV-LYVKMQIASFLLEKGNQKECKKLVDEGKTTLDS 494 D G Y++G + K+S E+P+ LY+K FLL + E K +D G++ +++ Sbjct: 121 DLGSGYIKGNV-----LKDSHSEDPIKLYLKEIGKEFLLTGNQEVELAKQMDSGESIIEN 175 Query: 495 MDDVDPSVHSTYY 533 + + V YY Sbjct: 176 ILKNEGLVIENYY 188
>RNP3_METTH (O26784) Ribonuclease P protein component 3 (EC 3.1.26.5) (RNase P| component 3) Length = 245 Score = 32.0 bits (71), Expect = 1.2 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Frame = -1 Query: 504 HRPY-YPMWFSPRLPVSY---TPFDSLSQEENLQSASSHTERALQSVIPWYHAASKLRPQ 337 HR + +P+ + R Y TP D ++ E SS E +L S AS L + Sbjct: 174 HRKFGFPLLLTSRASSIYDLRTPGDIMNLAECFGMESSEAEESLTST-----PASIL--E 226 Query: 336 DSLYRHLYLSTGVKLLPRS 280 DS RHL ++ GV+LLP S Sbjct: 227 DSGNRHLLIAEGVRLLPES 245
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Frame = +3 Query: 246 FESKINLLKFAHF--AVVVSRQYSDKDAGI-SYLEGVISKLHDTKESRIEEPVLYVKMQI 416 ++ K+N AHF AV+ + ++ + +Y V SK +DT I EP++ V +I Sbjct: 578 YDGKLNGALDAHFQTAVLYTTPSGERRVRVVNYCCAVTSKSYDTISLAIVEPIVAVLAKI 637 Query: 417 ASFLLEKGNQKECKKLVDEG 476 AS + G+ K+ + EG Sbjct: 638 ASTNIAAGSLKDTSVRLVEG 657
>FDHD_SULSO (Q97V15) Protein fdhD homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = +3 Query: 270 KFAHFAVVVSRQYSDKDAGISYL--EGVISKLHDTKE-SRIEEPVLYVKM 410 K FA+++ DK+ + +L EGVI+ +HD ++ ++E V+ VK+ Sbjct: 39 KCEDFAIIMRTPGDDKELSLGFLYSEGVINSIHDVEDIKQVENNVIEVKL 88
>FZOL_SCHPO (Q9USY7) Transmembrane GTPase fzo-like protein (EC 3.6.5.-)| Length = 758 Score = 30.4 bits (67), Expect = 3.4 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Frame = +3 Query: 138 RKLWH--QLTLKLDQFLALAVVQAGDALIQLYTHFISDFESKINLL------KFAHFAVV 293 RK+ H Q T + ++ L A VQ+ I +TH S+ E I+ L K++ F Sbjct: 447 RKVKHEQQFTYQKNESLVEATVQS----ISQHTH--SELEDAIDSLGSFASVKYSGFFFA 500 Query: 294 VSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQI 416 S +DA YLE + + D R EE VL ++ + Sbjct: 501 YQYAISVRDAMQQYLEEKLLESEDYARKRTEEAVLCIQKDV 541
>ZIPA_VIBVY (Q7MMT6) Cell division protein zipA homolog| Length = 311 Score = 30.0 bits (66), Expect = 4.5 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 7/148 (4%) Frame = +3 Query: 3 WPGRKEGKGSGGDQAMAAPLEFLEAQGSTRPELAEWYAALADLYQ--RKLWHQLTLKLDQ 176 W +KEGK GD+ PL L+ G + P+ +E Y A D Y+ RK + + ++ Sbjct: 25 WTSKKEGKAKFGDK----PLSKLDL-GESEPKESEMYVAPEDDYEIIRKERKEPAFEDEK 79 Query: 177 FLALAVVQAGDALIQLYTHFISDFESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISK 356 + + V GD LI H D E+K + KF D D ++ E S Sbjct: 80 PFSTSGV-IGDPLID-DLHSGQDKENKFSQPKF------------DDDITVAEAEAAASI 125 Query: 357 LHDT-----KESRIEEPVLYVKMQIASF 425 D + I+EP+ + +I +F Sbjct: 126 EQDAPAWVEQPQEIDEPLTHHPDEIDAF 153
>ZIPA_VIBVU (Q8DFK4) Cell division protein zipA homolog| Length = 311 Score = 30.0 bits (66), Expect = 4.5 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 7/148 (4%) Frame = +3 Query: 3 WPGRKEGKGSGGDQAMAAPLEFLEAQGSTRPELAEWYAALADLYQ--RKLWHQLTLKLDQ 176 W +KEGK GD+ PL L+ G + P+ +E Y A D Y+ RK + + ++ Sbjct: 25 WTSKKEGKAKFGDK----PLSKLDL-GESEPKESEMYVAPEDDYEIIRKERKEPAFEDEK 79 Query: 177 FLALAVVQAGDALIQLYTHFISDFESKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISK 356 + + V GD LI H D E+K + KF D D ++ E S Sbjct: 80 PFSTSGV-IGDPLID-DLHSGQDKENKFSQPKF------------DDDITVAEAEAAASI 125 Query: 357 LHDT-----KESRIEEPVLYVKMQIASF 425 D + I+EP+ + +I +F Sbjct: 126 EQDAPAWVEQPQEIDEPLTHHPDEIDAF 153
>FN3X_ARATH (Q9LEW8) Hypothetical 35.5 kDa protein At3g61080| Length = 318 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +3 Query: 81 GSTRPELAEWYAALADLY-QRKLWHQLTLKLDQFLALAVVQAGDALIQ 221 GST P++ W + + Y +++L +QL L DQ+ A+ Q G LIQ Sbjct: 159 GST-PQINTWSSDWIEFYGEKRLGYQLKLARDQYGDSAIYQKGHTLIQ 205
>RAD50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase| Length = 876 Score = 30.0 bits (66), Expect = 4.5 Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 11/162 (6%) Frame = +3 Query: 66 FLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFL-----ALAVVQAGDALIQLYT 230 F EA + E+A+ A + +RK TL L +F A +++ +A ++ + Sbjct: 131 FREAVYIRQGEIAKLVEATRE--ERKRIVDRTLGLAEFKKAREQAHELLRVAEAKLETFR 188 Query: 231 HFISDFE-SKINLLKFAHFAVVVSRQYSDKDAGISYLEGVISKLHDTKES--RIEEPVLY 401 + D + SK L + + R+ + + + L+ +++L + K R+E + Sbjct: 189 ERVRDLKGSKKELKRVERELEELKREVKELEPEVEELKERLNELREAKREFERLEGELRL 248 Query: 402 VKMQIASFLLEKGNQKECKKLVDEGKTT---LDSMDDVDPSV 518 ++ +I S KG + + +KLV+EGK L + DV V Sbjct: 249 LENKIESL---KGRRDDLRKLVEEGKEAERELQRLGDVPSKV 287
>YPIA_BACSU (P54389) Hypothetical protein ypiA| Length = 423 Score = 29.6 bits (65), Expect = 5.9 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Frame = +3 Query: 168 LDQFLAL--AVVQAGDALIQLYTHFISDFESKINLLKFAHFAVVVSRQYSDKDAGIS-YL 338 L + LAL V+A L+ +Y H D++ I+L++ R Y ++D + YL Sbjct: 295 LQEALALDPGFVEALHTLLAVY-HKEEDYDQIIDLIQEV-------RSYGEEDPKYNWYL 346 Query: 339 EGVISKLHDTKESRIEEPVLYVKM--------QIASFLLEKGNQKECKKLV 467 ++L +E++ Y+ + ASFLLE+G QKE L+ Sbjct: 347 ASAYTELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLL 397
>PUR5_PROMM (Q7V581) Phosphoribosylformylglycinamidine cyclo-ligase (EC| 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) Length = 345 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +3 Query: 87 TRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDAL 215 TRPEL +W + + LWH L + L +A D L Sbjct: 271 TRPELFQWLQDAGQIPEHDLWHTFNLGVGFCLVVAEEVVSDVL 313
>EF1A_PUCGR (P32186) Elongation factor 1-alpha (EF-1-alpha)| Length = 463 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 435 KGNQKECKKLVDEGKTTLDSMDDVDPSVHST 527 KG KE K V +GKT LD++D ++P T Sbjct: 209 KGWTKETKAGVSKGKTLLDAIDAIEPPSRPT 239
>EF1A_CRYNE (O42671) Elongation factor 1-alpha (EF-1-alpha)| Length = 459 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 435 KGNQKECKKLVDEGKTTLDSMDDVDPSVHST 527 KG KE K V +GKT L+++D ++P T Sbjct: 210 KGWTKETKSGVSKGKTLLEAIDAIEPPTRPT 240
>TLK1_CAEEL (P34314) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) Length = 965 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +3 Query: 282 FAVVVSRQYSDKDAGISYLEGVISKLHDTKESRIEEPVLYVKMQIASFLLEKGNQKECKK 461 F + +R S+K+A ++ V + ++ ++S P+++ ++ A+ LLE GN K Sbjct: 743 FYLKQNRSISEKEARSIIMQVVSALVYLNEKST---PIIHYDLKPANILLESGNTSGAIK 799 Query: 462 LVDEG--KTTLDSMDDVDPSVHST 527 + D G K DD D + T Sbjct: 800 ITDFGLSKIMEGESDDHDLGIELT 823
>TTF2_HUMAN (Q9UNY4) Transcription termination factor 2 (EC 3.6.1.-) (RNA| polymerase II termination factor) (Transcription release factor 2) (Factor 2) (F2) (HuF2) (Lodestar homolog) Length = 1162 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 474 PRLPVSYTPFDSLSQEENLQSASSHTERALQSVIPWYHAASKLRPQDSLYRHLYLSTGVK 295 P P+ + L +ENLQ +R V P + K+ P D + R +YL+T +K Sbjct: 366 PGSPLLFDSTLDLETKENLQFPDRSVQR---KVSPASGVSKKVEPSDPVARRVYLTTQLK 422
>SLMA_IDILO (Q5QZB7) HTH-type protein slmA| Length = 196 Score = 28.9 bits (63), Expect = 10.0 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 2/146 (1%) Frame = +3 Query: 42 QAMAAPLEFLEAQGSTRPELAEWYAALADLYQRKLWHQLTLKLDQFLALAVVQAGDALIQ 221 QA+AA LE Q T +LA A + + L+ K F L L + Sbjct: 14 QALAAMLETSPGQRITTAKLA----ANLGVSEAALYRHFPSKARMFEGLIEFVEDTLLTR 69 Query: 222 LYTHFISDFESKINLLKFAHFAVVVSRQYSDKDAGISYLE--GVISKLHDTKESRIEEPV 395 + + I D E N L H + + +++++ GI+ + + HD R+E+ Sbjct: 70 I--NMIMDEEK--NTLSRCHAILQLLLTFAERNPGITRVMTGDALMGEHDRLRGRMEDLF 125 Query: 396 LYVKMQIASFLLEKGNQKECKKLVDE 473 ++ I L EK +++ + +VDE Sbjct: 126 NRIESSIKQILREKAMREQQRFIVDE 151
>EF1A_SCHCO (O42820) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 435 KGNQKECKKLVDEGKTTLDSMDDVDPSV 518 KG KE K V +GKT LD++D ++P V Sbjct: 210 KGWTKETKAGVVKGKTLLDAIDAIEPPV 237
>EF1A2_SCHPO (Q10119) Elongation factor 1-alpha-B/C (EF-1-alpha-B/C)| Length = 460 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 435 KGNQKECKKLVDEGKTTLDSMDDVDPSVHST 527 +G QKE K V +GKT L+++D ++P T Sbjct: 210 QGWQKETKAGVVKGKTLLEAIDSIEPPARPT 240
>EF1A1_SCHPO (P50522) Elongation factor 1-alpha-A (EF-1-alpha-A)| Length = 460 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 435 KGNQKECKKLVDEGKTTLDSMDDVDPSVHST 527 +G QKE K V +GKT L+++D ++P T Sbjct: 210 QGWQKETKAGVVKGKTLLEAIDSIEPPARPT 240
>ECTB_STRAW (Q829L4) Diaminobutyrate--2-oxoglutarate transaminase (EC 2.6.1.76)| (Diaminobutyrate--2-oxoglutarate aminotransferase) (L-2,4-diaminobutyric acid transaminase) (DABA aminotransferase) Length = 423 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 18 EGKGSGGDQAMAAPLEFLEAQGSTRPELAEWYAALADLYQRK 143 E +GSG ++ A +E ++ +G EW ALA+L +R+ Sbjct: 194 EDQGSGLNKPAAVIVETVQGEGGINVARPEWLRALAELCKRQ 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,214,605 Number of Sequences: 219361 Number of extensions: 1112581 Number of successful extensions: 3987 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3880 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3986 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
