ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 5968335 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 5968394 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 5968395 caccagctcaccctcaagctcgaccacttcctc 5968427 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 5969024 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 5969081
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 117957 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 118016 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 118017 caccagctcaccctcaagctcgaccacttcctc 118049 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 118646 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 118703
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 26870 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 26929 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 26930 caccagctcaccctcaagctcgaccacttcctc 26962 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 27559 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 27616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 5967548 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 5967607 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 5967608 caccagctcaccctcaagctcgaccacttcctc 5967640 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 5968237 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 5968294
>dbj|AK101240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031O16, full insert sequence Length = 1579 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 150 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 209 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 210 caccagctcaccctcaagctcgaccacttcctc 242 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 292 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 349
>dbj|AK068605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157F16, full insert sequence Length = 1661 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 145 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 204 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 205 caccagctcaccctcaagctcgaccacttcctc 237 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 287 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 344
>dbj|AK064850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H02, full insert sequence Length = 1508 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 90 cggccggagctggcggagtggtacgccgccctcgccgatctctaccagcggaagctctgg 149 ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 145 cggccggagctcgccgacccgtacgccgacctcgccgacctctaccagcggaagctctgg 204 Query: 150 caccagctcaccctcaagctcgaccagttcctc 182 |||||||||||||||||||||||||| |||||| Sbjct: 205 caccagctcaccctcaagctcgaccacttcctc 237 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 287 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 344
>ref|NM_193765.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 111 tacgccgccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctc 170 ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 58 tacgccgacctcgccgacctctaccagcgcaagctctggcaccagctcaccctcaagctc 117 Query: 171 gaccagttcctc 182 ||||| |||||| Sbjct: 118 gaccacttcctc 129 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 ||||||||||||| || |||| |||||||||||||| ||| |||| ||||||||||| Sbjct: 179 atttcatctctgacttcgagacgaagatcaatcttctcaaacttgcccacttcgcggtca 238 Query: 292 tagtttcacgccagtac 308 | | ||||||||||||| Sbjct: 239 tcgcttcacgccagtac 255
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 111 tacgccgccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctc 170 ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 17998863 tacgccgacctcgccgacctctaccagcgcaagctctggcaccagctcaccctcaagctc 17998804 Query: 171 gaccagttcctc 182 ||||| |||||| Sbjct: 17998803 gaccacttcctc 17998792 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 ||||||||||||| || |||| |||||||||||||| ||| |||| ||||||||||| Sbjct: 17998461 atttcatctctgacttcgagacgaagatcaatcttctcaaacttgcccacttcgcggtca 17998402 Query: 292 tagtttcacgccagtac 308 | | ||||||||||||| Sbjct: 17998401 tcgcttcacgccagtac 17998385
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 111 tacgccgccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctc 170 ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 26104 tacgccgacctcgccgacctctaccagcgcaagctctggcaccagctcaccctcaagctc 26045 Query: 171 gaccagttcctc 182 ||||| |||||| Sbjct: 26044 gaccacttcctc 26033 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 ||||||||||||| || |||| |||||||||||||| ||| |||| ||||||||||| Sbjct: 25702 atttcatctctgacttcgagacgaagatcaatcttctcaaacttgcccacttcgcggtca 25643 Query: 292 tagtttcacgccagtac 308 | | ||||||||||||| Sbjct: 25642 tcgcttcacgccagtac 25626
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 111 tacgccgccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctc 170 ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118698 tacgccgacctcgccgacctctaccagcgcaagctctggcaccagctcaccctcaagctc 118639 Query: 171 gaccagttcctc 182 ||||| |||||| Sbjct: 118638 gaccacttcctc 118627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 ||||||||||||| || |||| |||||||||||||| ||| |||| ||||||||||| Sbjct: 118296 atttcatctctgacttcgagacgaagatcaatcttctcaaacttgcccacttcgcggtca 118237 Query: 292 tagtttcacgccagtac 308 | | ||||||||||||| Sbjct: 118236 tcgcttcacgccagtac 118220
>dbj|AK069825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028J18, full insert sequence Length = 1517 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 111 tacgccgccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctc 170 ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113 tacgccgacctcgccgacctctaccagcgcaagctctggcaccagctcaccctcaagctc 172 Query: 171 gaccagttcctc 182 ||||| |||||| Sbjct: 173 gaccacttcctc 184 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 ||||||||||||| || |||| |||||||||||||| ||| |||| ||||||||||| Sbjct: 234 atttcatctctgacttcgagacgaagatcaatcttctcaaacttgcccacttcgcggtca 293 Query: 292 tagtttcacgccagtac 308 | | ||||||||||||| Sbjct: 294 tcgcttcacgccagtac 310
>gb|AY103805.1| Zea mays PCO119314 mRNA sequence Length = 1791 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 118 ccctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagt 177 |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| | Sbjct: 299 ccctcgccgacctctaccagcagaagctatggcaccagctcaccctcaagctcgaccaat 358 Query: 178 tcct 181 |||| Sbjct: 359 tcct 362 Score = 48.1 bits (24), Expect = 0.031 Identities = 84/104 (80%) Strand = Plus / Plus Query: 394 ttctgtatgtgaagatgcagattgcaagttttcttcttgagaaagggaatcaaaaggagt 453 |||| |||||||||||||| |||||| | || |||||||||||| || ||||| |||| Sbjct: 575 ttctctatgtgaagatgcaaattgcagctattaatcttgagaaaggaaaccaaaaagagt 634 Query: 454 gtaagaaactggtagacgaggggaaaaccacattggatagtatg 497 | ||||| | | || || ||||||||||| ||||||||||| Sbjct: 635 gcaagaattcgttggaggatgggaaaaccaccctggatagtatg 678 Score = 46.1 bits (23), Expect = 0.12 Identities = 74/91 (81%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggtag 291 |||||||| |||||||||||| |||||| ||||| || || |||| || || ||||| Sbjct: 413 atttcatcactgattttgagaccaagattaatctgctcaagcttgcccattttgcggtga 472 Query: 292 tagtttcacgccagtactcagataaagatgc 322 ||| ||| ||||||||| | ||||| ||||| Sbjct: 473 tagcttctcgccagtaccctgataaggatgc 503
>ref|NM_203160.1| Arabidopsis thaliana unknown protein AT5G45620 transcript variant AT5G45620.2 mRNA, complete cds Length = 1793 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 136 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 195 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 196 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 255 Query: 261 aatcttct 268 |||||||| Sbjct: 256 aatcttct 263
>ref|NM_123930.3| Arabidopsis thaliana unknown protein AT5G45620 transcript variant AT5G45620.1 mRNA, complete cds Length = 1488 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 169 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 228 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 229 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 288 Query: 261 aatcttct 268 |||||||| Sbjct: 289 aatcttct 296
>gb|AY230841.1| Arabidopsis thaliana 26S proteasome subunit RPN9a (RPN9a) mRNA, complete cds Length = 1315 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 91 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 150 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 151 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 210 Query: 261 aatcttct 268 |||||||| Sbjct: 211 aatcttct 218
>gb|AY093136.1| Arabidopsis thaliana 26S proteasome subunit-like protein (At5g45620) mRNA, complete cds Length = 1438 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 180 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 239 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 240 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 299 Query: 261 aatcttct 268 |||||||| Sbjct: 300 aatcttct 307
>emb|BX830748.1|CNS09ZGZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1701 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 135 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 194 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 195 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 254 Query: 261 aatcttct 268 |||||||| Sbjct: 255 aatcttct 262
>gb|BT003384.1| Arabidopsis thaliana 26S proteasome subunit-like protein (At5g45620) mRNA, complete cds Length = 1224 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 91 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 150 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttgagagcaagatc 260 || || |||||| |||||||| | ||| |||||||| |||| ||||||| |||||| Sbjct: 151 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgagacgaagatc 210 Query: 261 aatcttct 268 |||||||| Sbjct: 211 aatcttct 218
>ref|NM_148355.3| Arabidopsis thaliana unknown protein AT4G19006 mRNA, complete cds Length = 1402 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 145 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 204 Query: 180 ctcgccctcgccgtcgtccaggcgggcgatgctctgattcagctttatactcatttcatc 239 |||| ||| | ||| | ||||| || |||||| | || |||||||| | |||||||| Sbjct: 205 atcgctctctctgtctttcaggctggagatgctttaatacagctttacaacaatttcatc 264 Query: 240 tctgattttgagagcaagatcaatcttct 268 |||| ||||||| | |||||||||||| Sbjct: 265 actgactttgagacgaggatcaatcttct 293
>gb|AY230842.1| Arabidopsis thaliana 26S proteasome subunit RPN9b (RPN9b) mRNA, complete cds Length = 1302 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 70 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 129 Query: 180 ctcgccctcgccgtcgtccaggcgggcgatgctctgattcagctttatactcatttcatc 239 |||| ||| | ||| | ||||| || |||||| | || |||||||| | |||||||| Sbjct: 130 atcgctctctctgtctttcaggctggagatgctttaatacagctttacaacaatttcatc 189 Query: 240 tctgattttgagagcaagatcaatcttct 268 |||| ||||||| | |||||||||||| Sbjct: 190 actgactttgagacgaggatcaatcttct 218
>emb|BX827985.1|CNS0A2EH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1200 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 108 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 167 Query: 180 ctcgccctcgccgtcgtccaggcgggcgatgctctgattcagctttatactcatttcatc 239 |||| ||| | ||| | ||||| || |||||| | || |||||||| | |||||||| Sbjct: 168 atcgctctctctgtctttcaggctggagatgctttaatacagctttacaacaatttcatc 227 Query: 240 tctgattttgagagcaagatcaatcttct 268 |||| ||||||| | |||||||||||| Sbjct: 228 actgactttgagacgaggatcaatcttct 256
>dbj|AK117761.1| Arabidopsis thaliana At4g19006 mRNA for unknown protein, complete cds, clone: RAFL17-44-P13 Length = 1391 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 118 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 177 Query: 180 ctcgccctcgccgtcgtccaggcgggcgatgctctgattcagctttatactcatttcatc 239 |||| ||| | ||| | ||||| || |||||| | || |||||||| | |||||||| Sbjct: 178 atcgctctctctgtctttcaggctggagatgctttaatacagctttacaacaatttcatc 237 Query: 240 tctgattttgagagcaagatcaatcttct 268 |||| ||||||| | |||||||||||| Sbjct: 238 actgactttgagacgaggatcaatcttct 266
>emb|BX827165.1|CNS0A3QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1386 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 145 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 204 Query: 180 ctcgccctcgccgtcgtccaggcgggcgatgctctgattcagctttatactcatttcatc 239 |||| ||| | ||| | ||||| || |||||| | || |||||||| |||||||| Sbjct: 205 atcgctctctctgtctttcaggctggagatgctttaatacagctttacgacaatttcatc 264 Query: 240 tctgattttgagagcaagatcaatcttct 268 |||| ||||||| | |||||||||||| Sbjct: 265 actgactttgagacgaggatcaatcttct 293
>emb|BX832332.1|CNS09ZTC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1383 Score = 65.9 bits (33), Expect = 1e-07 Identities = 106/129 (82%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgccgtcgtccag 200 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| ||| | ||| Sbjct: 132 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgctgtctttcag 191 Query: 201 gcgggcgatgctctgattcagctttatactcatttcatctctgattttg-agagcaagat 259 || || |||||| |||||||| | ||| |||||||| |||| |||| ||| ||||| Sbjct: 192 gctggtgatgctttgattcagttctatcacaatttcatcactgactttgcagacgaagat 251 Query: 260 caatcttct 268 ||||||||| Sbjct: 252 caatcttct 260
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49 Length = 199075 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 189417 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 189358 Query: 180 ctcgc 184 |||| Sbjct: 189357 atcgc 189353
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project) Length = 119111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 120 ctcgccgatctctaccagcggaagctctggcaccagctcaccctcaagctcgaccagttc 179 ||||| ||||| |||||| |||||||||||| |||||||| || |||||||| |||||| Sbjct: 76047 ctcgcagatctgtaccagaagaagctctggcatcagctcactcttaagctcgagcagttc 75988 Query: 180 ctcgc 184 |||| Sbjct: 75987 atcgc 75983
>dbj|AK061942.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D11, full insert sequence Length = 1390 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttcttaaatttgctcacttcgcggt 289 |||||||| ||||||| |||| |||||||||||||| ||| |||| || |||||||| Sbjct: 10 atttcatcactgatttcgagacgaagatcaatcttctcaaacttgcgcatttcgcggt 67
>dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19 Length = 86722 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 141 aagctctggcaccagctcaccctcaagctcgaccagttcctcgccctcgc 190 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| Sbjct: 5726 aagctctggcatcaactcacccttaagctcgaacagttcatcgctctcgc 5775 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 232 atttcatctctgattttgagagcaagatcaatcttct 268 |||||||| |||| ||||||| |||||||||||||| Sbjct: 6111 atttcatcactgactttgagacgaagatcaatcttct 6147
>gb|AC117222.3| Mus musculus BAC clone RP23-347H12 from chromosome 16, complete sequence Length = 200746 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaag 31 ||||||||||||||||||||||| Sbjct: 32345 ggaagaaaggaagggaaaggaag 32367
>gb|AC055820.7| Homo sapiens chromosome 18, clone RP11-636O21, complete sequence Length = 198543 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaa 30 ||||||||||||||||||||||| Sbjct: 88931 gggaagaaaggaagggaaaggaa 88909
>gb|AC016205.7| Homo sapiens, clone RP11-25C13, complete sequence Length = 167292 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaa 30 ||||||||||||||||||||||| Sbjct: 163284 gggaagaaaggaagggaaaggaa 163306
>gb|AC162945.5| Mus musculus BAC clone RP23-60O19 from chromosome 8, complete sequence Length = 221852 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaag 31 ||||||||||||||||||||||| Sbjct: 15774 ggaagaaaggaagggaaaggaag 15796
>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence Length = 228830 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaag 31 ||||||||||||||||||||||| Sbjct: 181591 ggaagaaaggaagggaaaggaag 181613
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 9196 ggaagaaaggaagggaaaggaa 9175
>gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete sequence Length = 93904 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 28424 ggaagaaaggaagggaaaggaa 28445
>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds Length = 220803 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 117377 ggaagaaaggaagggaaaggaa 117356
>gb|AC108063.3| Homo sapiens BAC clone RP11-452J21 from 4, complete sequence Length = 160582 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 83066 ggaagaaaggaagggaaaggaa 83087
>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete sequence Length = 238441 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 211456 ggaagaaaggaagggaaaggaa 211435
>gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosome 17, complete sequence Length = 197657 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaaggaa 30 |||||||||||||||||||||| Sbjct: 61776 ggaagaaaggaagggaaaggaa 61797
>emb|AM086217.1| Zea mays mRNA for putative laccase (lac5 gene) Length = 2044 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ttcctcgccctcgccgtcgtcc 198 |||||||||||||||||||||| Sbjct: 117 ttcctcgccctcgccgtcgtcc 138
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ggaagcggcggagaccaggcgatgg 51 |||||||||||||||| |||||||| Sbjct: 1042360 ggaagcggcggagaccgggcgatgg 1042384
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 45270 tcctcgccctcgccgtcgtcc 45250
>ref|XM_654680.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2168.2), mRNA Length = 1305 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 aagctcgaccagttcctcgcc 185 ||||||||||||||||||||| Sbjct: 4 aagctcgaccagttcctcgcc 24
>gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromosome 16, complete sequence Length = 161327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaagga 29 ||||||||||||||||||||| Sbjct: 127836 ggaagaaaggaagggaaagga 127816
>ref|XM_838261.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1178) partial mRNA Length = 4971 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ggaagcggcggagaccaggcgatgg 51 |||||||||||||||| |||||||| Sbjct: 4678 ggaagcggcggagaccgggcgatgg 4702
>gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-249B10, complete sequence Length = 213633 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaagga 29 ||||||||||||||||||||| Sbjct: 155285 ggaagaaaggaagggaaagga 155265
>gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, complete sequence Length = 215866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaagga 29 ||||||||||||||||||||| Sbjct: 57406 ggaagaaaggaagggaaagga 57426
>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence Length = 165927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 gccagtactcagataaagatg 321 ||||||||||||||||||||| Sbjct: 14127 gccagtactcagataaagatg 14107
>emb|AL031655.8|HS134N8 Human DNA sequence from clone RP1-134N8 on chromosome 20p12 Contains STSs, GSSs and a CpG island, complete sequence Length = 156325 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 gaagaaaggaagggaaaggaa 30 ||||||||||||||||||||| Sbjct: 80093 gaagaaaggaagggaaaggaa 80073
>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence Length = 155985 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 52956 aagaaaggaagggaaaggaag 52976 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 52924 aagaaaggaagggaaaggaag 52944
>gb|AC182841.2| Pan troglodytes BAC clone CH251-667I24 from chromosome 11, complete sequence Length = 189657 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 54241 aagaaaggaagggaaaggaag 54221
>gb|AC098936.2| Homo sapiens chromosome 1 clone RP11-576D8, complete sequence Length = 151324 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 64719 aagaaaggaagggaaaggaag 64739
>gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, complete sequence Length = 179414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 173966 aagaaaggaagggaaaggaag 173986
>gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, complete sequence Length = 186726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 40439 aagaaaggaagggaaaggaag 40419
>gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, complete sequence Length = 153873 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 56027 aagaaaggaagggaaaggaag 56007
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 gctcgaccagttcctcgccctcgcc 191 |||||||||| |||||||||||||| Sbjct: 259969 gctcgaccagatcctcgccctcgcc 259945
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 5540992 tcctcgccctcgccgtcgtcc 5541012
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 27814853 tcctcgccctcgccgtcgtcc 27814833 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cgccgccctcgccgatctct 132 |||||||||||||||||||| Sbjct: 10703066 cgccgccctcgccgatctct 10703047
>gb|AC048344.44| Homo sapiens 12 BAC RP11-843B15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 124427 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 21972 aagaaaggaagggaaaggaag 21992
>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence Length = 156244 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 17975 aagaaaggaagggaaaggaag 17995
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 87900 tcctcgccctcgccgtcgtcc 87920
>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full insert sequence Length = 2712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 604 tcctcgccctcgccgtcgtcc 584
>emb|AJ718237.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT34-4-310, cultivar Bright Yellow 2 Length = 249 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 234 ttcatctctgattttgagagcaagatcaatctt 266 |||||| |||||||||||| |||||||||||| Sbjct: 80 ttcatcactgattttgagacaaagatcaatctt 112
>dbj|AP003400.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-643G5, complete sequence Length = 135637 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 122039 aagaaaggaagggaaaggaag 122019
>gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complete sequence Length = 180858 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 gccagtactcagataaagatg 321 ||||||||||||||||||||| Sbjct: 1575 gccagtactcagataaagatg 1595
>emb|AL391623.13| Human DNA sequence from clone RP3-414F14 on chromosome 11, complete sequence Length = 47463 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 3564 aagaaaggaagggaaaggaag 3544 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaag 31 ||||||||||||||||||||| Sbjct: 3532 aagaaaggaagggaaaggaag 3512
>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds Length = 2622 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcctcgccctcgccgtcgtcc 198 ||||||||||||||||||||| Sbjct: 496 tcctcgccctcgccgtcgtcc 476
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cgccgccctcgccgatctct 132 |||||||||||||||||||| Sbjct: 87666 cgccgccctcgccgatctct 87647
>gb|AF048729.1| Homo sapiens minisatellite ms32 repeat region Length = 28945 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 19823 gggaaggaaggaagggaaaggaag 19846
>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence Length = 175030 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agttttcttcttgagaaagg 439 |||||||||||||||||||| Sbjct: 18883 agttttcttcttgagaaagg 18902
>ref|XM_415496.1| PREDICTED: Gallus gallus similar to GLE1-like, RNA export mediator; GLE1 (yeast homolog)-like, RNA export mediator; hGLE1 (LOC417212), mRNA Length = 4420 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggcgatggcggcgccgctgg 63 |||||||||||||||||||| Sbjct: 540 ggcgatggcggcgccgctgg 559
>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete sequence Length = 169499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 9858 tcaatcttcttaaatttgct 9839
>ref|XM_322991.1| Neurospora crassa OR74A related to IMPORTIN BETA-2 SUBUNIT (TRANSPORTIN) [MIPS] (NCU03690.1) partial mRNA Length = 2835 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 atggacgatgttgatccttc 514 |||||||||||||||||||| Sbjct: 2551 atggacgatgttgatccttc 2570
>ref|XM_956373.1| Neurospora crassa OR74A related to IMPORTIN BETA-2 SUBUNIT (TRANSPORTIN) [MIPS] (NCU03690.1) partial mRNA Length = 2835 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 atggacgatgttgatccttc 514 |||||||||||||||||||| Sbjct: 2551 atggacgatgttgatccttc 2570
>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence Length = 193047 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 77466 aagaaaggaagggaaaggaa 77447
>gb|AC146045.3| Pan troglodytes BAC clone RP43-14B22 from 7, complete sequence Length = 151553 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60496 gggaagaaaggaagggaagggaag 60519 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60478 gggaagaaaggaagggaagggaag 60501 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60460 gggaagaaaggaagggaagggaag 60483 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60415 gggaagaaaggaagggaagggaag 60438 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60257 gggaagaaaggaagggaagggaag 60280 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60239 gggaagaaaggaagggaagggaag 60262 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60221 gggaagaaaggaagggaagggaag 60244 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 60018 gggaagaaaggaagggaagggaag 60041
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ttcttgagaaagggaatcaa 446 |||||||||||||||||||| Sbjct: 190664 ttcttgagaaagggaatcaa 190683
>gb|AF519709.1| Betta picta isolate B136 recombinase activating protein 1 (RAG1) gene, partial cds Length = 1479 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cctcgccctcgccgtcgtcc 198 |||||||||||||||||||| Sbjct: 430 cctcgccctcgccgtcgtcc 411
>gb|AC099711.5| Mus musculus chromosome 15, clone RP23-397C11, complete sequence Length = 207144 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 90604 aagaaaggaagggaaaggaa 90585
>gb|AC147680.4| Canis Familiaris, clone XX-10H12, complete sequence Length = 214979 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atcttcttaaatttgctcac 281 |||||||||||||||||||| Sbjct: 71689 atcttcttaaatttgctcac 71708
>gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, complete sequence Length = 137605 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 118619 tcaatcttcttaaatttgct 118600
>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete sequence Length = 162544 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 99255 tcaatcttcttaaatttgct 99274
>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete sequence Length = 213673 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 148466 gggaagaaaggaagggaaag 148485
>emb|CT025604.10| Mouse DNA sequence from clone RP23-332P8 on chromosome 13, complete sequence Length = 200591 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 54552 gggaagaaaggaagggaagggaag 54529
>emb|CT009494.4| Mouse DNA sequence from clone RP23-125D7 on chromosome 13, complete sequence Length = 206416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaagg 28 |||||||||||||||||||| Sbjct: 114175 ggaagaaaggaagggaaagg 114156
>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete sequence Length = 155524 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ttcttgagaaagggaatcaa 446 |||||||||||||||||||| Sbjct: 579 ttcttgagaaagggaatcaa 598
>gb|AC132389.3| Mus musculus BAC clone RP23-448A4 from chromosome 19, complete sequence Length = 165998 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaaggaagc 32 ||||| |||||||||||||||||| Sbjct: 86458 ggaaggaaggaagggaaaggaagc 86435
>gb|AC002040.1|HUAC002040 Homo sapiens Chromosome 16 BAC clone CIT987-SK142A6 complete genomic sequence, complete sequence Length = 128765 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||| |||||||||||||||| Sbjct: 15638 gggaagacaggaagggaaaggaag 15615
>gb|AC117237.2| Mus musculus BAC clone RP23-431G18 from 13, complete sequence Length = 200110 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaagg 28 |||||||||||||||||||| Sbjct: 41713 ggaagaaaggaagggaaagg 41694
>gb|AC100383.12| Mus musculus chromosome 6, clone RP23-132E3, complete sequence Length = 241050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 tgcaagttttcttcttgagaaagg 439 ||||||| |||||||||||||||| Sbjct: 197488 tgcaagtcttcttcttgagaaagg 197465
>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence Length = 155704 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 59212 aagaaaggaagggaaaggaa 59231
>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence Length = 233422 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||||||||| |||||||||| Sbjct: 98041 gggaagaaaggaaaggaaaggaag 98018
>gb|AC018988.12| Homo sapiens chromosome 15, clone RP11-233C13, complete sequence Length = 116727 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ctggcaccagctcaccctcaagct 169 ||||||||| |||||||||||||| Sbjct: 52714 ctggcaccacctcaccctcaagct 52737
>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a RAB28, member RAS oncogene family pseudogene (RAB28), a pseudogene similar to part of recombining binding protein suppressor of hairless (Drosophila) (RBPSUH), two novel pseudogenes, a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), the 3' end of a novel gene and two CpG islands, complete sequence Length = 163837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 120269 tcaatcttcttaaatttgct 120288
>emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chromosome 9 Contains the 5' end of the gene for a novel protein similar to contactin associated protein-like 3 (CNTNAP3) and a CpG island, complete sequence Length = 187005 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 88208 tcaatcttcttaaatttgct 88227
>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), two novel pseudogenes, a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), a novel gene and a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), complete sequence Length = 167646 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 60615 tcaatcttcttaaatttgct 60596
>emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chromosome 9 Contains the 5' end of a novel gene, a novel pseudogene and a pseudogene similar to part of ribosomal protein L10 (RPL10), complete sequence Length = 153630 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 57997 tcaatcttcttaaatttgct 57978
>emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chromosome 9 Contains a pseudogene similar to part of 6-pyruvoyltetrahydropterin synthase (PTS), a novel gene similar to c9orf36, two novel genes and a novel pseudogene, complete sequence Length = 144571 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 96110 tcaatcttcttaaatttgct 96129
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 47903 tcaatcttcttaaatttgct 47922
>emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chromosome 9 Contains the C9orf36 gene for chromosome 9 open reading frame 36, two novel pseudogenes, a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and two novel genes, complete sequence Length = 143520 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 47227 tcaatcttcttaaatttgct 47208
>emb|AL662864.14| Human DNA sequence from clone RP11-493K23 on chromosome X Contains two novel genes, two novel genes similar to poly(A) binding protein cytoplasmic 1 (LOC340530, LOC340529) and two CpG islands, complete sequence Length = 120769 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 32984 tcaatcttcttaaatttgct 33003
>emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chromosome 9 Contains the gene for a novel protein similar to FLJ45202, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a pseudogene similar to part of contactin associated protein-like 4 (CNTNAP4), a novel pseudogene, three novel genes and a CpG island, complete sequence Length = 172579 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 140122 tcaatcttcttaaatttgct 140141
>emb|AL589764.19| Human DNA sequence from clone RP11-806J18 on chromosome 1 Contains the PSMB4 gene for proteasome (prosome, macropain) subunit beta type 4, the POGZ gene for pogo transposable element with ZNF domain and two CpG islands, complete sequence Length = 126491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 14486 aagaaaggaagggaaaggaa 14467
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 186567 gggaaggaaggaagggaaaggaag 186590
>emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on chromosome 1 Contains the 3' end of the gene for a novel protein, a novel pseudogene, the SFPQ gene for splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), the 5' end of the ZNF262 gene for zinc finger protein 262 and a CpG island, complete sequence Length = 185909 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 165757 gggaagaaaggaagggaagggaag 165734
>emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), two novel genes, a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and a CpG island, complete sequence Length = 174366 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 78605 tcaatcttcttaaatttgct 78586
>emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chromosome 1, complete sequence Length = 109470 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tttcatctctgattttgaga 252 |||||||||||||||||||| Sbjct: 59419 tttcatctctgattttgaga 59400
>emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), four novel genes, a pseudogene similar to part of ribosomal protein L10 (RPL10), a novel pseudogene and a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 129149 tcaatcttcttaaatttgct 129168
>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains three novel genes, a novel pseudogene, two novel pseudogenes (LOC339742), a tumor suppressor deleted in oral cancer-related 1 (DOC-1R) pseudogene, a pseudogene similar to part of prostaglandin E receptor 4 (subtype EP4) (PTGER4), a pseudogene similar to part of myosin VA (heavy polypeptide 12, myoxin) (MYO5A), a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7) and five CpG islands, complete sequence Length = 159539 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 96509 tcaatcttcttaaatttgct 96490
>emb|AL445584.16| Human DNA sequence from clone RP11-366N18 on chromosome 9 Contains the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and a CpG island, complete sequence Length = 184313 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 21962 tcaatcttcttaaatttgct 21943
>emb|AL360271.12| Human DNA sequence from clone RP11-513D4 on chromosome 1 Contains part of a novel gene (FLJ40773), a ribosomal protein L10a (RPL10A) pseudogene, pseudogene similar to part of excision repair cross-complementing rodent repair deficiency complementation group 3 (xeroderma pigmentosum group B complementing) (ERCC3) and a novel zinc finger protein pseudogene, complete sequence Length = 96789 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 62211 tcaatcttcttaaatttgct 62230
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tcgccctcgccgtcgtccag 200 |||||||||||||||||||| Sbjct: 3642337 tcgccctcgccgtcgtccag 3642356
>emb|AL359973.11| Human DNA sequence from clone RP11-10B2 on chromosome Xq24-26.1 Contains a prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (PTGS1) pseudogene, the gene for a novel protein similar to part of NADH dehydrogenase 4L (MTND4L) and a pseudogene similar to part of NADH dehydrogenase 4 (MTND4), complete sequence Length = 109699 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 72725 tcaatcttcttaaatttgct 72744
>gb|AC120035.6| Homo sapiens chromosome 8, clone RP11-1116K10, complete sequence Length = 151045 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 6139 tcaatcttcttaaatttgct 6120
>emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on chromosome X, complete sequence Length = 113526 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 atgcagattgcaagttttcttctt 431 ||||||||||||||||||| |||| Sbjct: 68984 atgcagattgcaagttttcatctt 68961
>emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on chromosome 9 Contains a novel pseudogene, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS-P1) pseudogene and three novel genes, complete sequence Length = 130898 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 90246 tcaatcttcttaaatttgct 90265
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gccgtcgtccaggcgggcga 208 |||||||||||||||||||| Sbjct: 1059985 gccgtcgtccaggcgggcga 1059966
>emb|AL157828.14| Human DNA sequence from clone RP11-214I20 on chromosome 9p22.3-24 Contains the 5' end of a novel gene and the 3' end of a novel gene (FLJ38505 FLJ90271), complete sequence Length = 100927 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 aatcttcttaaatttgctca 280 |||||||||||||||||||| Sbjct: 2648 aatcttcttaaatttgctca 2667
>emb|AL157906.8| Human DNA sequence from clone RP5-896C23 on chromosome 1p22.3-31.2 Contains GSSs and STSs, complete sequence Length = 115705 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 94021 tcaatcttcttaaatttgct 94002
>emb|AL157777.5| Human DNA sequence from clone RP11-76H14 on chromosome 6 Contains the HTR1E gene for 5-hydroxytryptamine (serotonin) receptor, a pseudogene similar to the 5' end of ST13 (suppression of tumorigenicity 13, a Hsp70-interacting protein), a pseudogene similar to the 5' end of a Tec protein-tyrosine kinase, a pseudogene similar to 60S ribosomal protein L7,a pseudogene similar to the bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase mitochondria and two CpG islands, complete sequence Length = 169669 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 10865 tcaatcttcttaaatttgct 10846
>emb|AL122018.37|HSDJ764D2 Human DNA sequence from clone RP4-764D2 on chromosome 1q42.2-43 Contains the 5' end of the NID gene for nidogen (enactin) protein, an aconitase 2, mitochondrial (ACO2) pseudogene, the 5' end of the TM7SF1 gene for transmembrane 7 superfamily member 1 (upregulated in kidney) and two CpG islands, complete sequence Length = 128811 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 71057 gggaaggaaggaagggaaaggaag 71080
>emb|AL117339.10|HSA508N22 Human DNA sequence from clone RP11-508N22 on chromosome 10 Contains the ZNF37A gene for zinc finger protein 37a (KOX 21), a eukaryotic translation initiation factor 3 subunit 6 interacting protein (EIF3S6IP) pseudogene, a FXYD domain containing ion transport regulator 6 (FXYD6) pseudogene, a par-3 partitioning defective 3 homolog (C.elegans) (PARD3) pseudogene, two novel genes, the 5' end of a novel gene for a protein similar to hypthetical protein FLJ40773 (containing FLJ3472), a pseudogene similar to part of excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) (ERCC3) and a CpG island, complete sequence Length = 208642 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 170155 tcaatcttcttaaatttgct 170136
>emb|AL035079.14|HS53C18 Human DNA sequence from clone RP1-53C18 on chromosome 11p12-13 Contains the CAT gene for Catalase, the first coding exon of the ortholog of rat Ankyrin repeat protein CCA3, a Recepin partial pseudogene, and a pseudogene similar to part of DNAJ proteins (HIRIP4, DNJ3, CPR3). Contains two CpG islands, complete sequence Length = 136284 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 100298 tcaatcttcttaaatttgct 100279
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains the 3' end of the SMARCA1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily a, member 1) and aribosomal protein S26 (RPS26) pseudogene, complete sequence Length = 147394 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 61828 tcaatcttcttaaatttgct 61809
>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174576 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||||||||| |||||||||| Sbjct: 53963 gggaagaaaggaatggaaaggaag 53986
>gb|AY148100.1| Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R) gene, complete cds Length = 18843 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 18406 gggaaggaaggaagggaaaggaag 18383
>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24 Length = 299050 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccaggcgatggcggcgccgc 60 |||||||||||||||||||| Sbjct: 62448 ccaggcgatggcggcgccgc 62467
>emb|AL451014.1|NCB9B15 Neurospora crassa DNA linkage group V BAC clone B9B15 Length = 81650 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 atggacgatgttgatccttc 514 |||||||||||||||||||| Sbjct: 24228 atggacgatgttgatccttc 24209
>gb|AC166081.3| Mus musculus 10 BAC RP24-184F11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161394 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 catttcatctctgattttga 250 |||||||||||||||||||| Sbjct: 55075 catttcatctctgattttga 55056
>emb|AL606470.15| Mouse DNA sequence from clone RP23-293J11 on chromosome 11 Contains a Friedreich ataxia protein (Frda) pseudogene, complete sequence Length = 203970 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 113965 gggaagaaaggaagggaagggaag 113988
>gb|AC055758.23| Homo sapiens 3 BAC RP11-88H10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173456 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 cgggaagaaaggaagggaaaggaa 30 |||||||||||||||| ||||||| Sbjct: 124361 cgggaagaaaggaaggaaaaggaa 124338
>emb|BX927294.7| Zebrafish DNA sequence from clone CH211-222I16 in linkage group 13, complete sequence Length = 104811 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 atactcatttcatctctgat 245 |||||||||||||||||||| Sbjct: 37950 atactcatttcatctctgat 37969
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a pseudogene similar to part of a novel protein (DKFZp434A171), a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of a novel transmembrane receptor protein and two novel pseudogenes, complete sequence Length = 189495 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 135341 tcaatcttcttaaatttgct 135360
>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete sequence Length = 166827 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 95250 tcaatcttcttaaatttgct 95231 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 35535 tcaatcttcttaaatttgct 35554
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 99824 gggaaggaaggaagggaaaggaag 99847
>gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, complete sequence Length = 209955 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 ctggcaccagctcaccctcaagct 169 ||||||||| |||||||||||||| Sbjct: 578 ctggcaccacctcaccctcaagct 555
>gb|AC008543.9| Homo sapiens chromosome 19 clone CTC-499B15, complete sequence Length = 231247 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 169660 aagaaaggaagggaaaggaa 169679
>gb|AC114967.2| Homo sapiens chromosome 5 clone RP11-301A5, complete sequence Length = 215308 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 12457 tcaatcttcttaaatttgct 12438
>emb|BX323062.10| Zebrafish DNA sequence from clone DKEYP-38H2 in linkage group 5, complete sequence Length = 199133 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tttatactcatttcatctct 242 |||||||||||||||||||| Sbjct: 160270 tttatactcatttcatctct 160251
>gb|AC069216.13| Homo sapiens 3 BAC RP11-621D6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150145 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 101610 gggaaggaaggaagggaaaggaag 101633
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 ggagttcctggaggcgcagggctc 85 |||||||||||||||| ||||||| Sbjct: 164100 ggagttcctggaggcggagggctc 164077
>gb|AC026732.5| Homo sapiens chromosome 5 clone CTD-2303L1, complete sequence Length = 104039 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 28002 tcaatcttcttaaatttgct 28021
>gb|AC104066.3| Homo sapiens BAC clone RP11-177B4 from 4, complete sequence Length = 128474 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tcatttcatctctgattttg 249 |||||||||||||||||||| Sbjct: 32436 tcatttcatctctgattttg 32417
>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence Length = 218652 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 177046 agaaaggaagggaaaggaag 177065
>gb|AC099482.3| Homo sapiens chromosome 16 clone CTC-391G2, complete sequence Length = 109071 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||| |||||||||||||||| Sbjct: 91507 gggaagacaggaagggaaaggaag 91484
>gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, complete sequence Length = 221475 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 178614 gggaagaaaggaagggaaag 178633
>gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, complete sequence Length = 111211 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||||||||| |||||||||| Sbjct: 102472 gggaagaaaggaaaggaaaggaag 102449
>gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, complete sequence Length = 84326 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tttcatctctgattttgaga 252 |||||||||||||||||||| Sbjct: 62475 tttcatctctgattttgaga 62494
>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence Length = 168521 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 28607 gggaagaaaggaagggaaag 28626
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tagtatggacgatgttgatc 510 |||||||||||||||||||| Sbjct: 546959 tagtatggacgatgttgatc 546940
>emb|BX072533.17| Zebrafish DNA sequence from clone CH211-158C3 in linkage group 15, complete sequence Length = 183704 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tgagaaagggaatcaaaagg 450 |||||||||||||||||||| Sbjct: 82346 tgagaaagggaatcaaaagg 82365
>gb|S71484.1|S71481S2 granulocyte colony-stimulating factor receptor {3' and 5' regions} [human, granulocyte, Genomic, 621 nt, segment 2 of 2] Length = 621 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 501 gggaaggaaggaagggaaaggaag 478
>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence Length = 191336 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agttttcttcttgagaaagg 439 |||||||||||||||||||| Sbjct: 117079 agttttcttcttgagaaagg 117098
>gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome 10, complete sequence Length = 214898 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 92002 aagaaaggaagggaaaggaa 92021
>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete sequence Length = 215692 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 agaaagggaatcaaaaggag 452 |||||||||||||||||||| Sbjct: 30150 agaaagggaatcaaaaggag 30131
>gb|AC090527.3|AC090527 Homo sapiens chromosome 15 clone RP11-96O20 map 15q21.1, complete sequence Length = 173585 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 21386 agaaaggaagggaaaggaag 21405
>gb|AF349432.1|AF349432 Mus musculus histone binding protein NASP (Nasp) gene, complete cds, alternatively spliced Length = 26850 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 13840 aagaaaggaagggaaaggaa 13821
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcctcgccctcgccgtcgtc 197 |||||||||||||||||||| Sbjct: 23078803 tcctcgccctcgccgtcgtc 23078822
>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 24386 agaaaggaagggaaaggaag 24367
>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence Length = 208462 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 33550 gggaaggaaggaagggaaaggaag 33527
>gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complete sequence Length = 147091 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 99055 gggaagaaaggaagggaaag 99074
>gb|DQ198146.1| Bacteriophage 700P1 putative tape measure protein, hypothetical phage-associated protein, putative tape measure protein, hypothetical phage-associated protein, putative tail components, putative tail-host specificity protein, putative structual protein, hypothetical phage-associated proteins, and lysin genes, complete cds Length = 12959 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 cagattgcaagttttcttcttgag 434 |||||||||||||||||| ||||| Sbjct: 7460 cagattgcaagttttctttttgag 7483
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 1737406 tcaatcttcttaaatttgct 1737387
>gb|AC025750.10| Homo sapiens BAC clone RP11-804P20 from 2, complete sequence Length = 151367 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||| ||||||| Sbjct: 89422 gggaagaaaggaaggggaaggaag 89399
>gb|AC154615.2| Mus musculus BAC clone RP23-257K8 from chromosome 13, complete sequence Length = 183054 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||||||||||||||| ||||| Sbjct: 17656 gggaagaaaggaagggaagggaag 17633
>gb|AC073091.5| Homo sapiens BAC clone RP11-335E8 from 2, complete sequence Length = 185174 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 144034 tcaatcttcttaaatttgct 144053
>gb|AC009232.3| Homo sapiens BAC clone RP11-352J11 from 2, complete sequence Length = 139885 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 cttcagtacattcgacctat 530 |||||||||||||||||||| Sbjct: 41483 cttcagtacattcgacctat 41502
>gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complete sequence Length = 156374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 102637 agaaaggaagggaaaggaag 102656
>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence Length = 155376 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 21845 tcaatcttcttaaatttgct 21826
>gb|AC007297.23| Homo sapiens 12 BAC RP11-690J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187737 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 148046 agaaaggaagggaaaggaag 148027
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gccgtcgtccaggcgggcga 208 |||||||||||||||||||| Sbjct: 1908439 gccgtcgtccaggcgggcga 1908420
>gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F6, complete sequence Length = 193643 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 63113 aagaaaggaagggaaaggaa 63132
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence Length = 155354 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 50411 gggaagaaaggaagggaaag 50430
>gb|AC129915.6| Homo sapiens chromosome 8, clone CTD-3212A4, complete sequence Length = 162359 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 107953 tcaatcttcttaaatttgct 107934
>gb|AC099661.11| Homo sapiens 3 BAC RP11-110C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155898 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 110766 gggaaggaaggaagggaaaggaag 110789
>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166071 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 96188 agaaaggaagggaaaggaag 96169
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 88715 aagaaaggaagggaaaggaa 88734
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcctcgccctcgccgtcgtc 197 |||||||||||||||||||| Sbjct: 1902 tcctcgccctcgccgtcgtc 1921
>emb|BX571848.8| Mouse DNA sequence from clone RP24-194N17 on chromosome 4, complete sequence Length = 41833 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 ||||||||||||||||||| |||| Sbjct: 14587 gggaagaaaggaagggaaatgaag 14564
>gb|AC153367.5| Mus musculus 10 BAC RP23-182A11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204838 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 catttcatctctgattttga 250 |||||||||||||||||||| Sbjct: 60446 catttcatctctgattttga 60465
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete sequences Length = 155513 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 28936 gggaagaaaggaagggaaag 28955
>gb|AE005078.1| Halobacterium sp. NRC-1 section 109 of 170 of the complete genome Length = 11449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggagtggtacgccgccctcg 123 |||||||||||||||||||| Sbjct: 2984 ggagtggtacgccgccctcg 2965
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcctcgccctcgccgtcgtc 197 |||||||||||||||||||| Sbjct: 138531 tcctcgccctcgccgtcgtc 138550
>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence Length = 157613 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 104646 agaaaggaagggaaaggaag 104627
>gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete sequence Length = 203072 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 tgcaagttttcttcttgagaaagg 439 ||||||| |||||||||||||||| Sbjct: 14632 tgcaagtcttcttcttgagaaagg 14609
>gb|AC006312.8|AC006312 Homo sapiens chromosome 9, clone hRPK.401_G_18, complete sequence Length = 207656 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||||| ||||||||||||||||| Sbjct: 159589 gggaaggaaggaagggaaaggaag 159566
>emb|AJ427985.1|HSA427985 Homo sapiens partial CD13 gene for aminopeptidase N, exons 10-12 and joined CDS Length = 2292 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 ctggcaccagctcaccctcaagct 169 ||||||||| |||||||||||||| Sbjct: 1960 ctggcaccacctcaccctcaagct 1937
>gb|AC006222.1|AC006222 Homo sapiens, clone hRPK.12_A_1, complete sequence Length = 165643 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agaaaggaagggaaaggaag 31 |||||||||||||||||||| Sbjct: 13805 agaaaggaagggaaaggaag 13824
>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 316810 gggaagaaaggaagggaaag 316829
>emb|CT573097.3| RP43-080H03, complete sequence Length = 174747 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 atgcagattgcaagttttcttctt 431 ||||||||||||||||||| |||| Sbjct: 49052 atgcagattgcaagttttcatctt 49075
>gb|AC100386.29| Mus musculus chromosome 10, clone RP23-132J19, complete sequence Length = 216928 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 53436 aagaaaggaagggaaaggaa 53417
>emb|AL135750.5|HSO20 Homo sapiens chromosome X sequence from BAC CEPHB20O20 region PHKA1-DXS227 map Xq13, complete sequence Length = 115637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 36421 tcaatcttcttaaatttgct 36440
>emb|AL928876.12| Mouse DNA sequence from clone RP23-236O6 on chromosome 2, complete sequence Length = 201545 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ggaagaaaggaagggaaagg 28 |||||||||||||||||||| Sbjct: 132048 ggaagaaaggaagggaaagg 132029
>gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, complete sequence Length = 246132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 54752 aagaaaggaagggaaaggaa 54733
>gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complete sequence Length = 196473 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||| ||||||||||||||||||| Sbjct: 151678 gggaggaaaggaagggaaaggaag 151655
>emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chromosome 9, complete sequence Length = 163795 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tcaatcttcttaaatttgct 278 |||||||||||||||||||| Sbjct: 68118 tcaatcttcttaaatttgct 68099
>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ggaagaaaggaagggaaagg 28 |||||||||||||||||||| Sbjct: 169993 ggaagaaaggaagggaaagg 170012
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 67276 aagaaaggaagggaaaggaa 67295
>emb|AL669953.7| Mouse DNA sequence from clone RP23-233B9 on chromosome 4, complete sequence Length = 179680 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aagaaaggaagggaaaggaa 30 |||||||||||||||||||| Sbjct: 168524 aagaaaggaagggaaaggaa 168543
>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete sequence Length = 213730 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gggaagaaaggaagggaaaggaag 31 |||| ||||||||||||||||||| Sbjct: 121273 gggaggaaaggaagggaaaggaag 121250
>emb|AL731707.12| Mouse DNA sequence from clone RP23-100C5 on chromosome 2, complete sequence Length = 205581 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 37565 gggaagaaaggaagggaaag 37584
>dbj|AP000470.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B15H23, LL56-APP region, complete sequence Length = 151675 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gggaagaaaggaagggaaag 27 |||||||||||||||||||| Sbjct: 150970 gggaagaaaggaagggaaag 150989
>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gccgtcgtccaggcgggcga 208 |||||||||||||||||||| Sbjct: 18239 gccgtcgtccaggcgggcga 18220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,742,000 Number of Sequences: 3902068 Number of extensions: 4742000 Number of successful extensions: 129094 Number of sequences better than 10.0: 204 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127606 Number of HSP's gapped (non-prelim): 1479 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
