>IMB4_SCHPO (O60100) Probable importin beta-4 subunit (Karyopherin beta-4|
           subunit) (Importin 123)
          Length = 1067

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -1

Query: 583 EVPDDVLLRQHAVAGGDGRHVVMLFSGPGVERDDQAVRVVGQQHVDGVEQARLWIHAASD 404
           EV  +VL +QH V  GD      +F     E D     +V  + VD  EQ  L I +A D
Sbjct: 786 EVVMEVLQKQHIVQAGD------VFDDDFEEED-----IVSNEEVDDTEQDALLIDSACD 834

Query: 403 AVV 395
            V+
Sbjct: 835 VVI 837

>MTN1_NOCAE (P50188) Modification methylase NaeI (EC 2.1.1.37)|
           (Cytosine-specific methyltransferase NaeI) (M.NaeI)
          Length = 413

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -1

Query: 448 DGVEQARLWIHAASDAVVTNHGGEHGHGPAERG-----RGVAEVGSVAADVA 308
           DG E A  W   A+D   T  GG   HG A+ G     R  AE+G  A  VA
Sbjct: 198 DGWEGAEEWAAQANDIAPTIVGGSKKHGGADLGPTRAKRAWAELGVDAMGVA 249

>AMY6_HORVU (P04750) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase) (Clones GRAMY56
           and 963)
          Length = 429

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 25/77 (32%), Positives = 33/77 (42%)
 Frame = +2

Query: 20  PPRSPVVDTVSAFPWRIVDTRDVPEYGCEHSVPRCLRPLHRQAGGACASVVDSHRGGPRH 199
           PP S  V      P R+ D  D  +YG +  +   +  LH +A  A A +V +HR   R 
Sbjct: 64  PPASQSVAEQGYMPGRLYDL-DASKYGNKAQLKSLIGALHGKAVKAIADIVINHRTAERK 122

Query: 200 APRRCRPIHLRGRCTPD 250
             R    I   G  TPD
Sbjct: 123 DGRGIYCIFEGG--TPD 137

>AMC2_ORYSA (P27941) Alpha-amylase isozyme C2 precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase)
          Length = 445

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +2

Query: 20  PPRSPVVDTVSAFPWRIVDTRDVPEYGCEHSVPRCLRPLHRQAGGACASVVDSHR 184
           PP S  V T    P R+ D  D   YG    +   +  LH +   A A VV +HR
Sbjct: 62  PPPSHSVSTQGYMPGRLYDL-DASRYGTSMELKSLISALHGKGIQAIADVVINHR 115

>AM2A_ORYSA (P27935) Alpha-amylase isozyme 2A precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase)
          Length = 445

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +2

Query: 20  PPRSPVVDTVSAFPWRIVDTRDVPEYGCEHSVPRCLRPLHRQAGGACASVVDSHR 184
           PP S  V T    P R+ D  D   YG    +   +  LH +   A A VV +HR
Sbjct: 62  PPPSHSVSTQGYMPGRLYDL-DASRYGTSMELKSLISALHGKGIQAIADVVINHR 115

>GMHA_METJA (Q58731) Probable phosphoheptose isomerase (EC 5.3.1.-)|
           (Sedoheptulose 7-phosphate isomerase)
          Length = 187

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 338 GDPAAALRRPVSVLTAVVGDHGVTRRVDPQTSLLDAIDVLLANNSHS 478
           G PA AL   +S+LTA+  D+G  R  + Q   L     +LA  S S
Sbjct: 71  GLPAIALTTDISILTAIGNDYGFDRIFERQVEALGKEGDVLAGISTS 117

>RPOB_ACIAD (Q6FF90) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1362

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = -1

Query: 598  GDGAEEVPDDVLLRQHAVAGGDGRHV-VMLFSGPGVERDDQAVRVVGQQ----HVDGVEQ 434
            G+ A +V D  L      +G  G  + V +F+  G+E+DD+A+ +   Q      D  E+
Sbjct: 916  GEKAADVKDSSL---RVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKAQLDAYRKDLKEE 972

Query: 433  ARLWIHAASDAVVTNHGGEHGHGPAERGRG 344
             +++  AA + +V    G+  +G     RG
Sbjct: 973  YKIFEEAARERIVRLLNGQESNGGGTTKRG 1002

>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 430 ELARRHRRAAGQQLAQPGRPAPRPDPKKA 516
           E  R+ R+A G + + PGR  PRP+P+ A
Sbjct: 70  ETERKRRKAGGARRSPPGR--PRPEPRNA 96

>K6PF2_SYNY3 (Q55988) 6-phosphofructokinase 2 (EC 2.7.1.11) (Phosphofructokinase|
           2) (Phosphohexokinase 2)
          Length = 384

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = -1

Query: 139 MQRSET--TWDRMLAAIFGHVSRIHNSPRECRDRIYYWRAG 23
           +QRS T  ++DR+LA +FG +  +    +E  D++  WR+G
Sbjct: 298 LQRSGTPLSFDRLLATVFG-IRAVELIEQEIYDQVVIWRSG 337


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,039,761
Number of Sequences: 219361
Number of extensions: 1514884
Number of successful extensions: 5980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5974
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)