Clone Name | bart42a11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY445161.1| Anabaena circinalis clone FP170 unknown DNA sequence Length = 399 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 gaacgcgctgctgcaatgcgggg 42 ||||| ||||||||||||||||| Sbjct: 225 gaacgtgctgctgcaatgcgggg 203
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 gacgaacgcgctgctgcaa 35 ||||||||||||||||||| Sbjct: 3499929 gacgaacgcgctgctgcaa 3499947
>ref|XM_314071.2| Anopheles gambiae str. PEST ENSANGP00000015662 (ENSANGG00000013173), partial mRNA Length = 8157 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ggacgaacgcgctgctgca 34 ||||||||||||||||||| Sbjct: 6410 ggacgaacgcgctgctgca 6428
>emb|CR655581.2|CNS0F4TF Tetraodon nigroviridis full-length cDNA Length = 1619 Score = 36.2 bits (18), Expect = 5.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 8 gggaggggggacgaacgcgctgctgc 33 |||| ||||| ||||||||||||||| Sbjct: 1209 gggacggggggcgaacgcgctgctgc 1234
>emb|AJ879085.1| Murraya paniculata ITS1 (partial), 5.8S rRNA gene and ITS2 (partial) Length = 683 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 gcggcgggaggggggacg 20 |||||||||||||||||| Sbjct: 72 gcggcgggaggggggacg 89
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ggcgggaggggggacgaa 22 |||||||||||||||||| Sbjct: 4352 ggcgggaggggggacgaa 4335
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 5717340 cgaacgcgctgctgcaat 5717357 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 5716459 cgaacgcgctgctgcaat 5716476
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 5717333 cgaacgcgctgctgcaat 5717350 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 5716452 cgaacgcgctgctgcaat 5716469
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 71863 cgaacgcgctgctgcaat 71880 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 cgaacgcgctgctgcaat 36 |||||||||||||||||| Sbjct: 70982 cgaacgcgctgctgcaat 70999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 261,634 Number of Sequences: 3902068 Number of extensions: 261634 Number of successful extensions: 57413 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57208 Number of HSP's gapped (non-prelim): 205 length of query: 46 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 26 effective length of database: 17,155,003,908 effective search space: 446030101608 effective search space used: 446030101608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)