Clone Information

BLAST Search Result

Clone Name	bart42a10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy...	213	3e-55
2	MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is...	150	2e-36
3	MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ...	148	9e-36
4	MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M...	147	2e-35
5	MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy...	147	2e-35
6	MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy...	131	1e-30
7	MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast...	108	8e-24
8	MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy...	107	2e-23
9	RURE_PSEOL (P17052) Rubredoxin-NAD(+) reductase (EC 1.18.1.1)	69	1e-11
10	BEDA_PSEPU (Q07946) Benzene 1,2-dioxygenase system ferredoxin--N...	62	2e-09
11	BNZD_PSEPU (P08087) Benzene 1,2-dioxygenase system ferredoxin--N...	54	4e-07
12	TODA_PSEPU (P13452) Toluene 1,2-dioxygenase system ferredoxin--N...	54	4e-07
13	BPHG_BURCE (P37337) Biphenyl dioxygenase system ferredoxin--NAD(...	53	7e-07
14	HCAD_ECOLI (P77650) 3-phenylpropionate dioxygenase ferredoxin--N...	53	7e-07
15	THCD_RHOER (P43494) Rhodocoxin reductase (EC 1.18.1.-)	49	1e-05
16	CAMA_PSEPU (P16640) Putidaredoxin reductase (EC 1.18.1.-)	49	1e-05
17	YDGE_SCHPO (Q10499) Putative flavoprotein C26F1.14C	48	2e-05
18	TERPA_PSESP (P33009) Terpredoxin reductase (EC 1.18.1.-)	47	3e-05
19	PDCD8_HUMAN (O95831) Programmed cell death protein 8, mitochondr...	42	0.002
20	NIR_EMENI (P22944) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)	41	0.003
21	NASB_BACSU (P42433) Assimilatory nitrate reductase electron tran...	40	0.005
22	PDCD8_RAT (Q9JM53) Programmed cell death protein 8, mitochondria...	40	0.006
23	PDCD8_MOUSE (Q9Z0X1) Programmed cell death protein 8, mitochondr...	39	0.008
24	NIR_LEPMC (P43504) Nitrite reductase [NAD(P)H] (EC 1.7.1.4) (Fra...	36	0.068
25	PDCD8_DROME (Q9VQ79) Putative oxidoreductase CG7263, mitochondri...	32	1.7
26	TIM50_GIBZE (Q4I099) Import inner membrane translocase subunit T...	32	1.7
27	WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family mem...	32	1.7
28	NAOX_ENTFA (P37061) NADH oxidase (EC 1.6.99.3) (NOXase)	31	2.9
29	TECTA_MOUSE (O08523) Alpha-tectorin precursor	31	2.9
30	TIM50_NEUCR (Q874C1) Import inner membrane translocase subunit t...	30	3.7
31	MRE11_COPCI (Q9UVN9) Double-strand break repair protein MRE11	30	3.7
32	LON_HELPJ (Q9ZJL3) ATP-dependent protease La (EC 3.4.21.53)	30	3.7
33	AHR_RABIT (O02747) Aryl hydrocarbon receptor (Ah receptor) (AhR)	30	4.9
34	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	4.9
35	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	6.4
36	POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p...	30	6.4
37	POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p...	30	6.4
38	POLG_HCVSA (O91936) Genome polyprotein [Contains: Core protein p...	30	6.4
39	POLG_HCVGL (Q5EG65) Genome polyprotein [Contains: Core protein p...	30	6.4
40	POLG_HCVJL (Q68798) Genome polyprotein [Contains: Core protein p...	30	6.4
41	POLG_HCVH (P27958) Genome polyprotein [Contains: Core protein p2...	30	6.4
42	POLG_HCV1 (P26664) Genome polyprotein [Contains: Core protein p2...	30	6.4
43	POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p...	30	6.4
44	WASF3_MOUSE (Q8VHI6) Wiskott-Aldrich syndrome protein family mem...	30	6.4
45	SCX5_CENNO (P45663) Toxin 5 precursor (Cn5) (CngtII)	30	6.4
46	POLG_HCVVP (O92532) Genome polyprotein [Contains: Core protein p...	30	6.4
47	POLG_HCVVA (Q9QAX1) Genome polyprotein [Contains: Core protein p...	30	6.4
48	POLG_HCVJP (Q9DHD6) Genome polyprotein [Contains: Core protein p...	30	6.4
49	POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p...	30	6.4
50	POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Core protein p...	30	6.4
51	POLG_HCVJ7 (P27961) Genome polyprotein [Contains: Core protein p...	30	6.4
52	POLG_HCVJ6 (P26660) Genome polyprotein [Contains: Core protein p...	30	6.4
53	POLG_HCVJ5 (P27960) Genome polyprotein [Contains: Core protein p...	30	6.4
54	LON_HELPY (P55995) ATP-dependent protease La (EC 3.4.21.53)	30	6.4
55	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	6.4
56	POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p...	30	6.4
57	POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p...	30	6.4
58	POLG_HCV6A (Q5I2N3) Genome polyprotein [Contains: Core protein p...	30	6.4
59	POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p...	30	6.4
60	MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy...	30	6.4
61	POLG_HCVJ2 (P27959) Genome polyprotein [Contains: Core protein p...	30	6.4
62	POLG_HCVED (O39929) Genome polyprotein [Contains: Core protein p...	30	6.4
63	NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (E...	29	8.3
64	VRP1_YEAST (P37370) Verprolin	29	8.3
65	TECTA_HUMAN (O75443) Alpha-tectorin precursor	29	8.3
66	POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p...	29	8.3

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score =  213 bits (542), Expect = 3e-55
 Identities = 109/147 (74%), Positives = 117/147 (79%)
 Frame = +2

Query: 131 MGRAFXXXXXXXXXXXXXXXXEFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDP 310
           MGRAF                EF RRG  S GELCIISEE VAPYERPALSKG+LLPE P
Sbjct: 1   MGRAFVYVILGGGVAAGYAALEFTRRG-VSDGELCIISEEPVAPYERPALSKGFLLPEAP 59

Query: 311 SRLPKFHTCVGANDELLTTKWYKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLII 490
           +RLP FHTCVGANDE LT KWYK+ GIELVLGTRV S DVRRKTLL++TGETISYK LII
Sbjct: 60  ARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLII 119

Query: 491 ATGARALKLEEFGISGSDAENICYLRN 571
           ATGARALKLEEFG+ GSDAEN+CYLR+
Sbjct: 120 ATGARALKLEEFGVEGSDAENVCYLRD 146

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>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score =  150 bits (380), Expect = 2e-36
 Identities = 73/125 (58%), Positives = 94/125 (75%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           EF ++G  + GEL IIS+EAVAPYERPALSK YL PE P+RLP FH CVG+  E L   W
Sbjct: 23  EFVKQG-LNPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPDW 81

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           YKE+GIEL+L T ++ AD+  K L +A G+  +Y+TLIIATG+  +KL +FG+ G+DA+N
Sbjct: 82  YKEKGIELILSTEIVEADLPAKRLRSAHGKIYNYQTLIIATGSTVIKLSDFGVQGADAKN 141

Query: 554 ICYLR 568
           I YLR
Sbjct: 142 IFYLR 146

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>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  148 bits (374), Expect = 9e-36
 Identities = 71/125 (56%), Positives = 92/125 (73%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           EFA++G    GEL IIS+EAVAPYERPALSK YL PE  +RLP FH CVG+  E    +W
Sbjct: 23  EFAKQG-VKPGELAIISKEAVAPYERPALSKAYLFPEGAARLPGFHVCVGSGGERQLPEW 81

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           Y E+GI L+L T ++ AD+  KTL++A GE+  Y+TL+IATG   LKL +FG+ G+D++N
Sbjct: 82  YAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGTTVLKLSDFGVQGADSKN 141

Query: 554 ICYLR 568
           I YLR
Sbjct: 142 IFYLR 146

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>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  147 bits (372), Expect = 2e-35
 Identities = 71/125 (56%), Positives = 94/125 (75%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           EF ++G +  GEL IIS+EAVAPYERPALSK YL PE P+RLP FHTCVG+  E L  +W
Sbjct: 22  EFVKQGVHP-GELAIISKEAVAPYERPALSKAYLFPESPARLPGFHTCVGSGGERLLPEW 80

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           Y E+GI+L L T ++SAD+  K L +A GE   Y+TL+IATG+  ++L +FG+ G++A+N
Sbjct: 81  YSEKGIQLYLSTEIVSADLAAKFLKSANGEHFDYQTLVIATGSAVIRLTDFGVIGANAKN 140

Query: 554 ICYLR 568
           I YLR
Sbjct: 141 IFYLR 145

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>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score =  147 bits (372), Expect = 2e-35
 Identities = 71/125 (56%), Positives = 95/125 (76%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           EFA +G    GEL +IS+EAVAPYERPALSKGYL PE  +RLP FH CVG+  E L  + 
Sbjct: 23  EFANQG-VQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPES 81

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           YK++GIEL+L T ++ AD+  K+L++ATG+   Y+TLIIATG+  L+L +FG+ G+D++N
Sbjct: 82  YKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTDFGVKGADSKN 141

Query: 554 ICYLR 568
           I YLR
Sbjct: 142 ILYLR 146

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>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score =  131 bits (330), Expect = 1e-30
 Identities = 61/119 (51%), Positives = 83/119 (69%)
 Frame = +2

Query: 212 GYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKEQGI 391
           G   GEL IIS E V PYERPALSKGY+  E+ + LP F+   G   E    +WYKE+GI
Sbjct: 29  GVKPGELAIISREQVPPYERPALSKGYIHLENKATLPNFYVAAGIGGERQFPQWYKEKGI 88

Query: 392 ELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENICYLR 568
           EL+LGT ++ AD+  KTL++ TG+   Y+TL+ ATG+  ++L +FG+ G+DA+NI YLR
Sbjct: 89  ELILGTEIVKADLAAKTLVSGTGQVFKYQTLLAATGSSVIRLSDFGVPGADAKNIFYLR 147

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>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score =  108 bits (271), Expect = 8e-24
 Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = +2

Query: 212 GYSRGELCIISEEAVAPYERPALSKGYLLPED--PSRLPKFHTCVGANDELLTTKWYKEQ 385
           G + G LCI+++EA APYERPAL+K YL P +  P+RLP FHTCVG   E  T  WYKE+
Sbjct: 83  GMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPDWYKEK 142

Query: 386 GIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEE 523
           GIE++    V  AD  ++TL T  G+ + Y +LIIATG  A +  +
Sbjct: 143 GIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPD 188

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>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score =  107 bits (267), Expect = 2e-23
 Identities = 53/125 (42%), Positives = 79/125 (63%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           EF+ +G    GEL IIS+E V P+ERP L+K Y+  E    L   + C G  +      W
Sbjct: 24  EFSNQG-LKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYPNW 82

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           YKE+GI+L++GT ++ AD+  KTL++  G+   Y+TL+IATG+  ++L E G+  +D +N
Sbjct: 83  YKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQEADVKN 142

Query: 554 ICYLR 568
           I YLR
Sbjct: 143 IFYLR 147

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>RURE_PSEOL (P17052) Rubredoxin-NAD(+) reductase (EC 1.18.1.1)|
          Length = 385

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +2

Query: 203 RRGGYSRGELCIISEEAVAPYERPALSKGYLLPE-DPSRLPKFHTCVGANDELLTTKWYK 379
           R+ GY +GE+ I S E+VAPY+RP LSK +L  E   S +P           L    +Y 
Sbjct: 20  RQYGY-KGEIRIFSRESVAPYQRPPLSKAFLTSEIAESAVP-----------LKPEGFYT 67

Query: 380 EQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENIC 559
              I + L T ++S DV RK + +  G+  +Y+ LI+AT A A +L      GS+   +C
Sbjct: 68  NNNITISLNTPIVSIDVGRKIVSSKDGKEYAYEKLILATPASARRLT---CEGSELSGVC 124

Query: 560 YLRN 571
           YLR+
Sbjct: 125 YLRS 128

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>BEDA_PSEPU (Q07946) Benzene 1,2-dioxygenase system ferredoxin--NAD(+)|
           reductase subunit (EC 1.18.1.3)
          Length = 410

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +2

Query: 203 RRGGYSRGELCIISEEAVAPYERPALSKGYLLP--EDPSRLPKFHTCVGANDELLTTKWY 376
           R  GY  G + +I EE   PY+RP+LSK  L    E P RL +               WY
Sbjct: 22  RAEGYE-GRISLIGEEQHLPYDRPSLSKAVLDGSFEQPPRLAE-------------ADWY 67

Query: 377 KEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENI 556
            E  IE++ G+ V   D ++K +    G TIS   ++IATG+RA  L    + GS    +
Sbjct: 68  SEASIEMLTGSEVTDLDTQKKMISLNDGSTISADAIVIATGSRARML---SLPGSQLPGV 124

Query: 557 CYLR 568
             LR
Sbjct: 125 VTLR 128

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>BNZD_PSEPU (P08087) Benzene 1,2-dioxygenase system ferredoxin--NAD(+)|
           reductase component (EC 1.18.1.3) (P4 subunit)
          Length = 408

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 35/115 (30%), Positives = 54/115 (46%)
 Frame = +2

Query: 224 GELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKEQGIELVL 403
           G + +I +E   PY+RP+LSK  L  +     P           L    WY E  I+++ 
Sbjct: 27  GRISLIGDEPHLPYDRPSLSKAVL--DGSLERPPI---------LAEADWYGEARIDMLT 75

Query: 404 GTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENICYLR 568
           G  V + DV+ +T+    G T+S   ++IATG+RA       + GS    +  LR
Sbjct: 76  GPEVTALDVQTRTISLDDGTTLSADAIVIATGSRA---RTMALPGSQLPGVVTLR 127

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>TODA_PSEPU (P13452) Toluene 1,2-dioxygenase system ferredoxin--NAD(+)|
           reductase component (EC 1.18.1.3)
          Length = 409

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 35/115 (30%), Positives = 54/115 (46%)
 Frame = +2

Query: 224 GELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKEQGIELVL 403
           G + +I +E   PY+RP+LSK  L  +     P           L    WY E  I+++ 
Sbjct: 27  GRISLIGDEPHLPYDRPSLSKAVL--DGSLERPPI---------LAEADWYGEARIDMLT 75

Query: 404 GTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENICYLR 568
           G  V + DV+ +T+    G T+S   ++IATG+RA       + GS    +  LR
Sbjct: 76  GPEVTALDVQTRTISLDDGTTLSADAIVIATGSRA---RTMALPGSQLPGVVTLR 127

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>BPHG_BURCE (P37337) Biphenyl dioxygenase system ferredoxin--NAD(+) reductase|
           component (EC 1.18.1.3)
          Length = 408

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 36/123 (29%), Positives = 58/123 (47%)
 Frame = +2

Query: 203 RRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKE 382
           R  GY  G + ++ +E+   Y+R  LSK  L  E P               +L + WY  
Sbjct: 22  RAQGYE-GRIHLLGDESHQAYDRTTLSKTVLAGEQPEP-----------PAILDSAWYAS 69

Query: 383 QGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENICY 562
             +++ LG RV   D+  + +   +G  ++Y  L++ATGARA ++    I G D   I  
Sbjct: 70  AHVDVQLGRRVSCLDLANRQIQFESGAPLAYDRLLLATGARARRM---AIRGGDLAGIHT 126

Query: 563 LRN 571
           LR+
Sbjct: 127 LRD 129

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>HCAD_ECOLI (P77650) 3-phenylpropionate dioxygenase ferredoxin--NAD(+)|
           reductase component (EC 1.18.1.3) (Digoxigenin system
           ferredoxin--NAD(+) reductase component)
          Length = 400

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 34/105 (32%), Positives = 51/105 (48%)
 Frame = +2

Query: 203 RRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKE 382
           R+ G++ GEL + S+E   PYERP LSK  LL + P              ++L   W++E
Sbjct: 23  RQQGFT-GELHLFSDERHLPYERPPLSKSMLLEDSPQL-----------QQVLPANWWQE 70

Query: 383 QGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKL 517
             + L  G  + +     + L+   GE+  +  L IATGA A  L
Sbjct: 71  NNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPL 115

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>THCD_RHOER (P43494) Rhodocoxin reductase (EC 1.18.1.-)|
          Length = 426

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
 Frame = +2

Query: 203 RRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKE 382
           R  G+S G + ++ +E   PY+RP LSK Y L  DP R          +  L   +++ +
Sbjct: 19  RSHGFS-GTITLVGDEPGVPYQRPPLSKAY-LHSDPDR---------ESLALRPAQYFDD 67

Query: 383 QGIELVLGTRV--ISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENI 556
             I L  G  V  I  D +R  L+ AT   I Y  LI+ATGAR   L    + G++   +
Sbjct: 68  HRITLTCGKPVVRIDRDAQRVELIDAT--AIEYDHLILATGARNRLLP---VPGANLPGV 122

Query: 557 CYLR 568
            YLR
Sbjct: 123 HYLR 126

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>CAMA_PSEPU (P16640) Putidaredoxin reductase (EC 1.18.1.-)|
          Length = 422

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 34/124 (27%), Positives = 54/124 (43%)
 Frame = +2

Query: 197 FARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWY 376
           F  R     G + ++ +  V P+  P LSK YL  +              +  L T   Y
Sbjct: 21  FGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGK----------ATAESLYLRTPDAY 70

Query: 377 KEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENI 556
             Q I+L+ GT+V + +  R+ ++ + G  + Y  L++ATG R   L     +   A N 
Sbjct: 71  AAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNF 130

Query: 557 CYLR 568
            YLR
Sbjct: 131 RYLR 134

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>YDGE_SCHPO (Q10499) Putative flavoprotein C26F1.14C|
          Length = 575

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
 Frame = +2

Query: 194 EFARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKW 373
           E+ R   + +G++ I + E   PY+RP LSK  L   D S+L            L + ++
Sbjct: 174 EYLREKNF-KGKITIFTREDEVPYDRPKLSKSLL--HDISKL-----------ALRSKEY 219

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGE--TISYKTLIIATGARALKLEEFGISGSDA 547
           Y +  I     T V   D+  K +   + E  T SY  LI+ATG    KL    I G D+
Sbjct: 220 YDDLDISFHFNTDVTKIDLAEKKIYCGSDEKPTESYTKLILATGGEPNKLP---IPGLDS 276

Query: 548 ENICYLRN 571
           +N+  LR+
Sbjct: 277 KNVYLLRS 284

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>TERPA_PSESP (P33009) Terpredoxin reductase (EC 1.18.1.-)|
          Length = 409

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
 Frame = +2

Query: 197 FARRGGYSRGELCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTK-W 373
           F R  GY  G + ++S E   PY+RP LSK YLL +             +   LL  K  
Sbjct: 23  FLREFGY-HGRVLLLSAETQHPYQRPPLSKEYLLAQH------------STPSLLKGKDS 69

Query: 374 YKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           Y    IEL L   V+S     + + ++ G + +Y  LI+ATG+    +   G     A+N
Sbjct: 70  YARADIELCLQDDVLSITPASRQVKSSQG-SYTYDHLILATGSHPRFMATLG----QADN 124

Query: 554 ICYL 565
           +CYL
Sbjct: 125 LCYL 128

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>PDCD8_HUMAN (O95831) Programmed cell death protein 8, mitochondrial precursor|
           (EC 1.-.-.-) (Apoptosis-inducing factor)
          Length = 613

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
 Frame = +2

Query: 236 IISEEAVAPYERPALSKGYLLPEDPS-------------------RLPKFHTCVGANDEL 358
           I+SE+   PY RP LSK     +DP+                   + P F+  V A D  
Sbjct: 161 IVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFY--VSAQD-- 216

Query: 359 LTTKWYKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISG 538
                 +  G+ ++ G +V+  DVR   +    G  I+Y+  +IATG     L     +G
Sbjct: 217 --LPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAG 274

Query: 539 SDAEN 553
           ++ ++
Sbjct: 275 AEVKS 279

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>NIR_EMENI (P22944) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)|
          Length = 1104

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +2

Query: 368 KWY---KEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISG 538
           +WY   K++  +  L TRV     + KT+ T+TG+ +SY  L++ATG+ A+        G
Sbjct: 108 EWYGSFKDRSFDYYLNTRVTDVFPQHKTVKTSTGDIVSYDILVLATGSDAVL--PTSTPG 165

Query: 539 SDAENICYLR 568
            DA+ I   R
Sbjct: 166 HDAKGIFVYR 175

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>NASB_BACSU (P42433) Assimilatory nitrate reductase electron transfer subunit|
          Length = 770

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +2

Query: 347 NDELLTTK-WYKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGA 502
           +D  L +K WY + GI L  G  VI  D  ++ ++T    T+SY  LI+ATG+
Sbjct: 59  DDITLNSKDWYDKHGITLYTGETVIQIDTDQQQVITDRKRTLSYDKLIVATGS 111

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>PDCD8_RAT (Q9JM53) Programmed cell death protein 8, mitochondrial precursor|
           (EC 1.-.-.-) (Apoptosis-inducing factor)
          Length = 612

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
 Frame = +2

Query: 236 IISEEAVAPYERPALSKGYLLPEDPS-------------------RLPKFHTCVGANDEL 358
           I+SE+   PY RP LSK     +DP+                   + P F+  V A D  
Sbjct: 160 IVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFY--VSAQD-- 215

Query: 359 LTTKWYKEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISG 538
                 +  G+ ++ G +V+  DVR   +    G  I+++  +IATG     L     +G
Sbjct: 216 --LPHIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAG 273

Query: 539 SDAEN 553
           ++ ++
Sbjct: 274 AEVKS 278

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>PDCD8_MOUSE (Q9Z0X1) Programmed cell death protein 8, mitochondrial precursor|
           (EC 1.-.-.-) (Apoptosis-inducing factor)
          Length = 612

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
 Frame = +2

Query: 236 IISEEAVAPYERPALSKGYLLPEDPS--RLPKFHTCVGANDELL--TTKWY--------- 376
           I+SE+   PY RP LSK     +DP+  +  +F    G    +      +Y         
Sbjct: 160 IVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQWNGKERSIYFQPPSFYVSAQDLPNI 219

Query: 377 KEQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           +  G+ ++ G +V+  DVR   +    G  I+++  +IATG     L     +G++ ++
Sbjct: 220 ENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAGAEVKS 278

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>NIR_LEPMC (P43504) Nitrite reductase [NAD(P)H] (EC 1.7.1.4) (Fragment)|
          Length = 185

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 368 KWYK---EQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGA 502
           +WY    E  +   L T V   D   KT+ T++G+ +SY  L++ATG+
Sbjct: 136 EWYSSMPEDSLHYHLNTLVTEIDSENKTVKTSSGQAVSYDILVLATGS 183

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>PDCD8_DROME (Q9VQ79) Putative oxidoreductase CG7263, mitochondrial precursor|
           (EC 1.-.-.-)
          Length = 739

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
 Frame = +2

Query: 227 ELCIISEEAVAPYERPALSKG-YLLP---EDPSRLPKFHTCVGANDELL--TTKWYKEQ- 385
           ++ +IS E   PY RP LSK  +  P   EDP +  +F    G+   L     +++ +  
Sbjct: 281 KVLMISNEFRKPYMRPPLSKELWYTPNPNEDPIKDYRFKQWTGSERSLFFEPDEFFIDPE 340

Query: 386 --------GIELVLGTRVISADVRRKTLLTATGETISYKTLIIATG 499
                   GI +  G  V   D +++ +    G  ISY   +IATG
Sbjct: 341 DLDDNANGGIAVAQGFSVKKVDAQKRIVTLNDGYEISYDECLIATG 386

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>TIM50_GIBZE (Q4I099) Import inner membrane translocase subunit TIM50,|
           mitochondrial precursor
          Length = 525

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 248 EAVAPYERPALSKGYLLPE-DPSRLPKFHTCVGANDELLTTKWYKEQG 388
           E+V  Y+ PA  K  LLP+ DP+    +  C+  +D L+ ++W +E G
Sbjct: 213 ESVTYYQEPAFEK--LLPDPDPTFERPYTLCLSLDDLLIHSEWTREHG 258

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>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
           (Verprolin homology domain-containing protein 3)
          Length = 502

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 19  PPPPPRLATSRAERPRHGPRLGTEKEEEEKQP 114
           PP PP   +S +  P HGP +   K +E  QP
Sbjct: 404 PPGPPGPGSSLSSSPMHGPPVAEAKRQEPAQP 435

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>NAOX_ENTFA (P37061) NADH oxidase (EC 1.6.99.3) (NOXase)|
          Length = 446

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +2

Query: 428 VRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAENICYLRN 571
           V  K L T   ET+SY  L++ TG+  +      I G DAENI   +N
Sbjct: 89  VTAKNLQTGATETVSYDKLVMTTGSWPIIPP---IPGIDAENILLCKN 133

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>TECTA_MOUSE (O08523) Alpha-tectorin precursor|
          Length = 2155

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 397  CSWNKSDIC*CETEDIAYSNWRNY 468
            CSW ++    C+T+ IA + WRNY
Sbjct: 1342 CSWLQNYASTCQTQGIAVTGWRNY 1365

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>TIM50_NEUCR (Q874C1) Import inner membrane translocase subunit tim-50,|
           mitochondrial precursor
          Length = 540

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 VAPYERPALSKGYLLPE-DPSRLPKFHTCVGANDELLTTKWYKEQGIEL 397
           V+ Y+ PA  K  LLP+ DPS    +  C+   D L+ ++W ++ G  L
Sbjct: 226 VSYYQEPAFEK--LLPDPDPSFERPYTLCISLEDMLVHSEWTRDHGWRL 272

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>MRE11_COPCI (Q9UVN9) Double-strand break repair protein MRE11|
          Length = 731

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +1

Query: 4   DSFHHPPPPP--RLATSRAERPRHGPRLGTEKEEEEKQPSGRGQ 129
           D    PPPPP  R ATSRA   +  P     K+       GRG+
Sbjct: 593 DDDDEPPPPPKRRAATSRATTTKKAPAKAPAKKATTTTARGRGK 636

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>LON_HELPJ (Q9ZJL3) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 831

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
 Frame = +2

Query: 221 RGELCIISEEAVAPYERPALSKGYLLPED-------PSRLPKFHTCVGANDELLTTKWYK 379
           R  +  IS  +  P E+  ++K YL+P++       PS +   H C+    +L+  K+ +
Sbjct: 494 RDRMEFISVSSYTPSEKEEIAKNYLIPQELEKHALKPSEVDISHECL----KLIIEKYTR 549

Query: 380 EQGIELVLGTRVISADVRRKTLLTATGETISYKTLIIATGARALKLEEFGISGSDAEN 553
           E G+           D+RR+         + Y         R  K E+    G + EN
Sbjct: 550 EAGVR----------DLRRQIATIMRKAALKYLEDNPHKKGRTKKSEDKDKKGGNEEN 597

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>AHR_RABIT (O02747) Aryl hydrocarbon receptor (Ah receptor) (AhR)|
          Length = 847

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 172 HAAAQDDVH--ERAPHPARVHWAASPPPPSRCLDAGHGAASLLGL 44
           H +  + +H  +RA    ++HWA +P   S+C D G GA    GL
Sbjct: 154 HQSVYELIHTEDRAEFQRQLHWALNP---SQCTDPGQGADETHGL 195

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 9   LSSSPTPTTTRHKPSREAAPWPASRH 86
           LS S +P   RH+PS  A P P +RH
Sbjct: 386 LSPSASPPRRRHRPSSPATPPPKTRH 411

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 9   LSSSPTPTTTRHKPSREAAPWPASRH 86
           LS S +P   RH+PS  A P P +RH
Sbjct: 388 LSPSASPPRRRHRPSPPATPPPKTRH 413

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>POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3009

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3009

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVSA (O91936) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3013

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVGL (Q5EG65) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23)] (Fragment)
          Length = 828

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJL (Q68798) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3021

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVH (P27958) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/NT
          Length = 3010

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCV1 (P26664) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/NT
          Length = 3010

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3020

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>WASF3_MOUSE (Q8VHI6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
          Length = 501

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 19  PPPPPRLATSRAERPRHGPRLGTEKEEEEKQP 114
           PPP P   +S +  P HGP +   K  E  QP
Sbjct: 403 PPPGPPGPSSLSSSPMHGPPVAEAKRPEPAQP 434

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>SCX5_CENNO (P45663) Toxin 5 precursor (Cn5) (CngtII)|
          Length = 87

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 553 VFSIRTTYSKLFQL*SPSTCCNYKCLIADSFSSCCKQC 440
           +F I T ++K   L + ST C Y CL+      C K+C
Sbjct: 11  LFLIGTVWAKEGYLVNKSTGCKYGCLLLGKNEGCDKEC 48

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>POLG_HCVVP (O92532) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3014

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVVA (Q9QAX1) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJP (Q9DHD6) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRTTRKTSERSQPRGRRQ 62

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>POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJ7 (P27961) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70)] (Fragment)
          Length = 736

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJ6 (P26660) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVJ5 (P27960) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70)] (Fragment)
          Length = 736

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>LON_HELPY (P55995) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 835

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
 Frame = +2

Query: 221 RGELCIISEEAVAPYERPALSKGYLLPED-------PSRLPKFHTCVGANDELLTTKWYK 379
           R  +  IS  +  P E+  ++K YL+P++       PS +   H C+    +L+  K+ +
Sbjct: 494 RDRMEFISVSSYTPNEKEEIAKNYLIPQELEKHALKPSEVEISHECL----KLIIEKYTR 549

Query: 380 EQGI 391
           E G+
Sbjct: 550 EAGV 553

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 9   LSSSPTPTTTRHKPSREAAPWPASRH 86
           LS S +P   RH+PS  A P P +RH
Sbjct: 388 LSPSASPPRRRHRPSPPATPPPKTRH 413

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>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3015

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3018

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCV6A (Q5I2N3) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3018

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3012

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 248 EAVAPYERPALSK 286
           EAVAPYERPALSK
Sbjct: 1   EAVAPYERPALSK 13

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>POLG_HCVJ2 (P27959) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70)] (Fragment)
          Length = 512

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>POLG_HCVED (O39929) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3007

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRRGPRLGVRATRKTSERSQPRGRRQ 62

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>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)|
          Length = 957

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 23/91 (25%), Positives = 38/91 (41%)
 Frame = +2

Query: 230 LCIISEEAVAPYERPALSKGYLLPEDPSRLPKFHTCVGANDELLTTKWYKEQGIELVLGT 409
           + +  EE  A Y+R  L++ Y        L            L+   ++ + GIEL L  
Sbjct: 33  IVVFCEERYAAYDRVHLTE-YFAGRSAESL-----------SLVEGDFFTQHGIELRLSE 80

Query: 410 RVISADVRRKTLLTATGETISYKTLIIATGA 502
            V S D   + +  A G    +  L++ATG+
Sbjct: 81  SVASIDREARVVRDAFGHETHWDKLVLATGS 111

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 19  PPPPPRLATSRAERPRHGPRLGTEKEEEEKQPS 117
           PPPPP +ATS    P   P L T K     + S
Sbjct: 427 PPPPPSVATSVPSAPPPPPTLTTNKPSASSKQS 459

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>TECTA_HUMAN (O75443) Alpha-tectorin precursor|
          Length = 2155

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 397  CSWNKSDIC*CETEDIAYSNWRNY 468
            CSW ++    C+T+ I  + WRNY
Sbjct: 1342 CSWLQNYASTCQTQGITVTGWRNY 1365

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>POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3017

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 61  PRHGPRLG---TEKEEEEKQPSGRGQ 129
           PR GPRLG   T K  E  QP GR Q
Sbjct: 37  PRKGPRLGVRATRKTSERSQPRGRRQ 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,697,257
Number of Sequences: 219361
Number of extensions: 1407957
Number of successful extensions: 7263
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 6396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7192
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result