ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42a02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 236 bits (119), Expect = 7e-59 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 262 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 321 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 24791798 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 24791857 Query: 322 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 381 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 24791858 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 24791915 Query: 382 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 441 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 24791916 -aacacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 24791974 Query: 442 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 501 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 24791975 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 24792034 Query: 502 atgccgtacaccctgctccccgagtcggtc 531 | ||||||| || ||||| ||||||||| Sbjct: 24792035 acgccgtaccagcttctcccggagtcggtc 24792064 Score = 107 bits (54), Expect = 4e-20 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 2550945 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 2550886 Query: 353 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 406 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 2550885 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 2550826 Query: 407 cgcacgactgcatcccgt 424 ||||||||||| |||||| Sbjct: 2550825 cgcacgactgcgtcccgt 2550808 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 24853052 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 24852993 Query: 317 gcaccacgtggctcaaggcgctggccttcgccac 350 ||||||||||||||||||| |||||||||||||| Sbjct: 24852992 gcaccacgtggctcaaggccctggccttcgccac 24852959 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 306 ccccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgc 365 |||||||||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| Sbjct: 2542869 ccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcgccgcgc 2542810 Query: 366 gtacccggcgccg 378 | ||||| ||||| Sbjct: 2542809 gcacccgccgccg 2542797 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcg 359 ||||||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 2406825 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcg 2406773 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 |||||||||||||| |||||||||||||||||| |||||||| |||| Sbjct: 2542760 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatgga 2542714 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 443 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 24852910 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 24852851 Query: 444 cgacgggcaggaggccaagctcga 467 |||| | |||||||||||||||| Sbjct: 24852850 ggacgaggaggaggccaagctcga 24852827 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 381 gcagcacccgctcctccgcctcaacccgcacgac 414 |||||| ||||||||||||||||||||||||||| Sbjct: 2406737 gcagcatccgctcctccgcctcaacccgcacgac 2406704 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 142 gaggagttcggggacctcgtcgcagcgctgccgcg 176 ||||||||||| ||||||||||| ||||||||||| Sbjct: 24791681 gaggagttcggcgacctcgtcgcggcgctgccgcg 24791715
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 236 bits (119), Expect = 7e-59 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 262 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 321 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 26249 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 26308 Query: 322 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 381 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 26309 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 26366 Query: 382 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 441 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 26367 -aacacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 26425 Query: 442 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 501 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 26426 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 26485 Query: 502 atgccgtacaccctgctccccgagtcggtc 531 | ||||||| || ||||| ||||||||| Sbjct: 26486 acgccgtaccagcttctcccggagtcggtc 26515 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 87503 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 87444 Query: 317 gcaccacgtggctcaaggcgctggccttcgccac 350 ||||||||||||||||||| |||||||||||||| Sbjct: 87443 gcaccacgtggctcaaggccctggccttcgccac 87410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 443 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 87361 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 87302 Query: 444 cgacgggcaggaggccaagctcga 467 |||| | |||||||||||||||| Sbjct: 87301 ggacgaggaggaggccaagctcga 87278 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 142 gaggagttcggggacctcgtcgcagcgctgccgcg 176 ||||||||||| ||||||||||| ||||||||||| Sbjct: 26132 gaggagttcggcgacctcgtcgcggcgctgccgcg 26166
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 236 bits (119), Expect = 7e-59 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 262 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 321 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 271 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 330 Query: 322 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 381 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 331 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 388 Query: 382 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 441 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 389 -aacacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 447 Query: 442 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 501 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 448 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 507 Query: 502 atgccgtacaccctgctccccgagtcggtc 531 | ||||||| || ||||| ||||||||| Sbjct: 508 acgccgtaccagcttctcccggagtcggtc 537 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 142 gaggagttcggggacctcgtcgcagcgctgccgcg 176 ||||||||||| ||||||||||| ||||||||||| Sbjct: 154 gaggagttcggcgacctcgtcgcggcgctgccgcg 188
>gb|AY106554.1| Zea mays PCO133039 mRNA sequence Length = 474 Score = 194 bits (98), Expect = 2e-46 Identities = 219/258 (84%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 88 cctgttccgttcacggacgtcgacgacggcacggtgccgaagcgcccagccaaagaggag 147 ||||| ||||||| ||||||||||||||||| || || ||| | | |||| |||||| Sbjct: 91 cctgtgccgttcaaggacgtcgacgacggcagtgttccagagcacactcccaaggaggag 150 Query: 148 ttcggggacctcgtcgcagcgctgccgcgcaagcatcaggccggcctggagctgcggctg 207 ||||| |||||||| || ||||||||| ||| ||| ||| || |||||||||||| ||| Sbjct: 151 ttcggcgacctcgtggccgcgctgccgagcaggcagcagtccatcctggagctgcgcctg 210 Query: 208 taccaggggttctggcttcccgaccactgggtcgcgggcacagtcgtcttccagcgccgc 267 |||||||| |||||||| || || |||||||| |||| || |||| |||||||||||| Sbjct: 211 taccagggcttctggctgccggagcactgggtgccggggaccatcgtgttccagcgccgc 270 Query: 268 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgt-g 326 ||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 271 ttcacgccgcgccccgacgacgtgatcctcgcgagctaccccaagtgcggcaccacgtgg 330 Query: 327 gctcaaggcgctggcctt 344 ||| || ||||||||||| Sbjct: 331 gctgaaagcgctggcctt 348
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 107 bits (54), Expect = 4e-20 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 281 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 340 Query: 353 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 406 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 341 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 400 Query: 407 cgcacgactgcatcccgt 424 ||||||||||| |||||| Sbjct: 401 cgcacgactgcgtcccgt 418
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 107 bits (54), Expect = 4e-20 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 115925 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 115866 Query: 353 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 406 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 115865 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 115806 Query: 407 cgcacgactgcatcccgt 424 ||||||||||| |||||| Sbjct: 115805 cgcacgactgcgtcccgt 115788 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 306 ccccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgc 365 |||||||||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| Sbjct: 107849 ccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcgccgcgc 107790 Query: 366 gtacccggcgccg 378 | ||||| ||||| Sbjct: 107789 gcacccgccgccg 107777 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 |||||||||||||| |||||||||||||||||| |||||||| |||| Sbjct: 107740 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatgga 107694
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||| ||||||||| ||| || ||||||| ||||||| ||| |||||||||| Sbjct: 34483 tccagcgccacttcgccccgcgcgacggcgacgtggtcctcgcgagcctgcccaagtgcg 34424 Query: 317 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtaccc 371 ||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 34423 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtaccc 34369 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttc 426 ||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 34337 gcacccgctgctccatctcaacccgcacgactgcgtcccgttc 34295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||| ||||||||| ||| || ||||||| ||||||| ||| |||||||||| Sbjct: 8623317 tccagcgccacttcgccccgcgcgacggcgacgtggtcctcgcgagcctgcccaagtgcg 8623258 Query: 317 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtaccc 371 ||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 8623257 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtaccc 8623203 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 17387005 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 17387064 Query: 353 t 353 | Sbjct: 17387065 t 17387065 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 17345390 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 17345444 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 353 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 17354657 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 17354703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttc 426 ||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 8623171 gcacccgctgctccatctcaacccgcacgactgcgtcccgttc 8623129 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1892880 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1892838 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 1895036 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 1894991
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||| ||||||||| ||| || ||||||| ||||||| ||| |||||||||| Sbjct: 8694080 tccagcgccacttcgccccgcgcgacggcgacgtggtcctcgcgagcctgcccaagtgcg 8694021 Query: 317 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtaccc 371 ||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 8694020 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtaccc 8693966 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 17480715 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 17480774 Query: 353 t 353 | Sbjct: 17480775 t 17480775 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 17439249 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 17439303 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 353 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 17448516 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 17448562 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttc 426 ||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 8693934 gcacccgctgctccatctcaacccgcacgactgcgtcccgttc 8693892 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1890601 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1890559 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 1892757 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 1892712
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 268 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtgg 327 ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 25560384 ttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctgg 25560325 Query: 328 ctcaaggcgct 338 ||||||||||| Sbjct: 25560324 ctcaaggcgct 25560314 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 282 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 341 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 25558002 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 25557943 Query: 342 cttcgcca 349 |||||||| Sbjct: 25557942 cttcgcca 25557935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 336 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 25528323 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 25528264 Query: 337 ctggccttcgcca 349 || ||||||||| Sbjct: 25528263 ctctccttcgcca 25528251 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 8468981 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 8468922 Query: 353 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 406 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 8468921 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 8468862 Query: 407 cgcacgactgc 417 ||||||||||| Sbjct: 8468861 cgcacgactgc 8468851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 367 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 12059971 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 12060019 Score = 58.0 bits (29), Expect = 3e-05 Identities = 105/128 (82%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || ||||||||||||||||| || |||||| || Sbjct: 8458886 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgccgtca 8458945 Query: 353 tgacgcgcgacgcgtacccggcgccg-gcgc--agcacccgctcctccgcctcaacccgc 409 || |||| | ||| ||||| || || || | | |||||||||| |||||||||||||| Sbjct: 8458946 tggcgcgggcggcgcacccgccggcgagccccgaccacccgctccgccgcctcaacccgc 8459005 Query: 410 acgactgc 417 |||||||| Sbjct: 8459006 acgactgc 8459013 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccg 378 ||||||||||||||||| || || |||||||||||| |||||| | || |||| || || Sbjct: 10720099 accacgtggctcaaggccctcgcgttcgccaccatggcgcgcggcttgttcccgccggcg 10720040 Query: 379 -gcgcag--cacccgctcctccgcctcaacccgcacgactgc 417 || | | |||||||||| |||||||||| ||||||||||| Sbjct: 10720039 agccccgaccacccgctccgccgcctcaactcgcacgactgc 10719998 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgca 410 |||||||||| ||||||||||||||| Sbjct: 12060040 cacccgctccgccgcctcaacccgca 12060065
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 268 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtgg 327 ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 47075 ttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctgg 47016 Query: 328 ctcaaggcgct 338 ||||||||||| Sbjct: 47015 ctcaaggcgct 47005 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 282 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 341 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 44693 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 44634 Query: 342 cttcgcca 349 |||||||| Sbjct: 44633 cttcgcca 44626 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 336 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 15014 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 14955 Query: 337 ctggccttcgcca 349 || ||||||||| Sbjct: 14954 ctctccttcgcca 14942
>ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 282 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 341 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 198 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 257 Query: 342 cttcgcca 349 |||||||| Sbjct: 258 cttcgcca 265
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol 3-sulfotransferase (OSJNBb0038H12.7), mRNA Length = 1005 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 351 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 194 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 313 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 359
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 351 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19406 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 19461 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 19525 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 19571
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 351 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5904477 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 5904422 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 5904358 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 5904312 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 gtcaccggcgccgccgtcgccggc 552 |||||||||||||||| ||||||| Sbjct: 15592607 gtcaccggcgccgccgccgccggc 15592630
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 351 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 302 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 357 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 421 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 467
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 351 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5905663 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 5905608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 5905544 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 5905498 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 gtcaccggcgccgccgtcgccggc 552 |||||||||||||||| ||||||| Sbjct: 15600848 gtcaccggcgccgccgccgccggc 15600871
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 257 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 316 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 36684 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 36625 Query: 317 gcaccacgtggctcaaggcgctggccttcgccac 350 ||||||||||||||||||| |||||||||||||| Sbjct: 36624 gcaccacgtggctcaaggccctggccttcgccac 36591 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 384 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 443 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 36542 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 36483 Query: 444 cgacgggcaggaggccaagctcga 467 |||| | |||||||||||||||| Sbjct: 36482 ggacgaggaggaggccaagctcga 36459
>ref|NM_186313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcg 359 ||||||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 209 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcg 157 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 381 gcagcacccgctcctccgcctcaacccgcacgac 414 |||||| ||||||||||||||||||||||||||| Sbjct: 121 gcagcatccgctcctccgcctcaacccgcacgac 88
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 115787 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 115846 Query: 353 t 353 | Sbjct: 115847 t 115847 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 74321 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 74375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 353 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 83588 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 83634
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 141780 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 141839 Query: 353 t 353 | Sbjct: 141840 t 141840 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 100314 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 100368 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 353 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 109581 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 109627
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcg 359 ||||||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 109833 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcg 109781 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 381 gcagcacccgctcctccgcctcaacccgcacgac 414 |||||| ||||||||||||||||||||||||||| Sbjct: 109745 gcagcatccgctcctccgcctcaacccgcacgac 109712
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 336 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 159639 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 159580 Query: 337 ctggccttcgcca 349 || ||||||||| Sbjct: 159579 ctctccttcgcca 159567
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 231 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 290 Query: 353 t 353 | Sbjct: 291 t 291
>ref|XM_480894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 269 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 328 Query: 353 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 406 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 329 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 388 Query: 407 cgcacgactgc 417 ||||||||||| Sbjct: 389 cgcacgactgc 399
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 84698 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 84639 Query: 353 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 406 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 84638 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 84579 Query: 407 cgcacgactgc 417 ||||||||||| Sbjct: 84578 cgcacgactgc 84568 Score = 58.0 bits (29), Expect = 3e-05 Identities = 105/128 (82%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || ||||||||||||||||| || |||||| || Sbjct: 74603 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgccgtca 74662 Query: 353 tgacgcgcgacgcgtacccggcgccg-gcgc--agcacccgctcctccgcctcaacccgc 409 || |||| | ||| ||||| || || || | | |||||||||| |||||||||||||| Sbjct: 74663 tggcgcgggcggcgcacccgccggcgagccccgaccacccgctccgccgcctcaacccgc 74722 Query: 410 acgactgc 417 |||||||| Sbjct: 74723 acgactgc 74730
>dbj|AK099021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F24, full insert sequence Length = 1209 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 268 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 327 Query: 353 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 406 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 328 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 387 Query: 407 cgcacgactgc 417 ||||||||||| Sbjct: 388 cgcacgactgc 398
>dbj|AK061204.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B05, full insert sequence Length = 1234 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 266 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 325 Query: 353 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 406 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 326 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 385 Query: 407 cgcacgactgc 417 ||||||||||| Sbjct: 386 cgcacgactgc 396
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 288 cgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 |||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 58703 cgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 58762 Query: 348 c 348 | Sbjct: 58763 c 58763 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgc 417 |||||||||| ||| | |||||||||||||||| Sbjct: 58803 cacccgctccgccgtcgcaacccgcacgactgc 58835
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/228 (80%), Gaps = 5/228 (2%) Strand = Plus / Plus Query: 283 gacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcc 342 |||||||| ||| ||||||||| ||||||| ||||||||| ||||| || || || | Sbjct: 284858 gacgacgtcatcgtcgccagctttcccaagtccggcaccacttggcttaacgcccttact 284917 Query: 343 ttcgccaccatgacgcgcgacgcgtacccggc-gccggcgcag--cacccgctcctccgc 399 |||||||||||| |||| | | |||| || |||||||| | |||||||| | ||| Sbjct: 284918 ttcgccaccatggcgcggcgcactaacccagccgccggcgccggccacccgctgttacgc 284977 Query: 400 ctcaacccgcacgactgcatcccgttcctggacgagatcttcgccgacgggca-ggaggc 458 |||||||||||| | |||||||| ||||||||| | ||||| | || ||| |||||| Sbjct: 284978 ctcaacccgcaccagtgcatccctttcctggacaaactcttc-cagagctgcacggaggc 285036 Query: 459 caagctcgagaagctcccgtcgccgcgcctcatgaacacgcacatgcc 506 |||||||||| ||| ||||| |||||||||||||| ||||||||||| Sbjct: 285037 caagctcgaggcgctgccgtccccgcgcctcatgaatacgcacatgcc 285084
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 288 cgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 |||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 21712683 cgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 21712742 Query: 348 c 348 | Sbjct: 21712743 c 21712743 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgc 417 |||||||||| ||| | |||||||||||||||| Sbjct: 21712783 cacccgctccgccgtcgcaacccgcacgactgc 21712815
>ref|XM_476629.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 |||||||||||||| |||||||||||||||||| |||||||| |||| Sbjct: 64 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatgga 110
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 331 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 7945072 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 7945126 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 428 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 7945201 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 7945244 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctg 339 ||||||| |||||| |||||| ||||||||||| Sbjct: 24909373 cccaagtccggcacgacgtggatcaaggcgctg 24909341 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 22582190 ggcgccgccgtcgccggctgc 22582210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 22579079 ggcgccgccgtcgccggctgc 22579099 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 acgcgtacccggcgccggcg 381 |||||||||||||||||||| Sbjct: 6210887 acgcgtacccggcgccggcg 6210868
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 331 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 52590 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 52644 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 428 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 52719 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 52762
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 277 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 331 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 273 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 327 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 428 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 402 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 445
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 347 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 256 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 310
>gb|AY108956.1| Zea mays PCO130274 mRNA sequence Length = 631 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgcca 349 ||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 323 tcctcgccacctacctgaaatgcgggaccacgtggctgaaggcgctggccttcgcca 379
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 310 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 348 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 9822641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 388 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 9822598 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 9822555 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1822172 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1822130 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 25539049 ccggcgccgccgtcgccggc 25539068
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 310 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 348 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 388 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 351 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 394
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 310 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 348 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 9822564 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 9822526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 388 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 9822483 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 9822440 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1822150 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1822108 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 25467225 ccggcgccgccgtcgccggc 25467244
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 310 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 348 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 109829 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 388 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 109872 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 109915
>ref|XM_481385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 367 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 280 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 328 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgca 410 |||||||||| ||||||||||||||| Sbjct: 349 cacccgctccgccgcctcaacccgca 374
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 58.0 bits (29), Expect = 3e-05 Identities = 105/128 (82%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 352 ||||||||||| |||||||| || || ||||||||||||||||| || |||||| || Sbjct: 317 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgttcgccgtca 376 Query: 353 tgacgcgcgacgcgtacccggcgccg-gcgc--agcacccgctcctccgcctcaacccgc 409 || |||| | ||| ||||| || || || | | |||||||||| |||||||||||||| Sbjct: 377 tggcgcgggcggcgcacccgccggcgagccccgaccacccgctccgccgcctcaacccgc 436 Query: 410 acgactgc 417 |||||||| Sbjct: 437 acgactgc 444
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 367 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 111466 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 111514 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgca 410 |||||||||| ||||||||||||||| Sbjct: 111535 cacccgctccgccgcctcaacccgca 111560
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 367 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 57105 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 57153 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgca 410 |||||||||| ||||||||||||||| Sbjct: 57174 cacccgctccgccgcctcaacccgca 57199
>dbj|AK058698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C01, full insert sequence Length = 1315 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 367 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 345 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 393 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgca 410 |||||||||| ||||||||||||||| Sbjct: 414 cacccgctccgccgcctcaacccgca 439
>dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F12, full insert sequence Length = 1834 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 388 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 431 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 279 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 322
>ref|XM_481221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccg 378 ||||||||||||||||| || || |||||||||||| |||||| | || |||| || || Sbjct: 304 accacgtggctcaaggccctcgcgttcgccaccatggcgcgcggcttgttcccgccggcg 363 Query: 379 -gcgcag--cacccgctcctccgcctcaacccgcacgactgc 417 || | | |||||||||| |||||||||| ||||||||||| Sbjct: 364 agccccgaccacccgctccgccgcctcaactcgcacgactgc 405
>ref|NM_183698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 227 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 269
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 24536 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 24494 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 26692 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 26647
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 110710 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 110668 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Minus Query: 293 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 112866 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 112821
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 240 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 282
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 11687234 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 11687192 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 7692340 ccggcgccgccgtcgccggc 7692321 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgcgtacccggcgccggcgc 382 |||||||||||||||||||| Sbjct: 3962341 cgcgtacccggcgccggcgc 3962360
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 126358 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 126316
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 26402 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 26360
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 319 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccg 378 ||||||||||||||||| || || |||||||||||| |||||| | || |||| || || Sbjct: 17231 accacgtggctcaaggccctcgcgttcgccaccatggcgcgcggcttgttcccgccggcg 17172 Query: 379 -gcgcag--cacccgctcctccgcctcaacccgcacgactgc 417 || | | |||||||||| |||||||||| ||||||||||| Sbjct: 17171 agccccgaccacccgctccgccgcctcaactcgcacgactgc 17130
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 299 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 341
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 16890 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 16848
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 296 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 338 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 18310 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 18352
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 285 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 344 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 27987092 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 27987033 Query: 345 c 345 | Sbjct: 27987032 c 27987032 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 356 cgcgcgacgcgtacccggcgccggcgcagc 385 |||||||||||| |||||||||||||||| Sbjct: 24693324 cgcgcgacgcgtggccggcgccggcgcagc 24693295 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 4950674 ccggcgccgccgtcgccggc 4950693
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 285 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 344 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 30754 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 30695 Query: 345 c 345 | Sbjct: 30694 c 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 285 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 344 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 114544 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 114485 Query: 345 c 345 | Sbjct: 114484 c 114484
>gb|AE012016.1| Xanthomonas axonopodis pv. citri str. 306, section 394 of 469 of the complete genome Length = 10410 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccggctgcaa 557 ||||||||||||||||| ||||||||| Sbjct: 7113 caccggcgccgccgtcggcggctgcaa 7139
>ref|NM_114377.1| Arabidopsis thaliana sulfotransferase AT3G45080 mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 223 tgcggcaccacttggctcaaggcgct 248
>ref|NM_114376.2| Arabidopsis thaliana sulfotransferase AT3G45070 mRNA, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 208 tgcggcaccacttggctcaaggcgct 233
>ref|XM_470110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 528 ggtcaccggcgccgccgtcgccggct 553 ||||||||||||||||| |||||||| Sbjct: 831 ggtcaccggcgccgccgccgccggct 806
>ref|XM_466790.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 356 cgcgcgacgcgtacccggcgccggcgcagc 385 |||||||||||| |||||||||||||||| Sbjct: 67 cgcgcgacgcgtggccggcgccggcgcagc 38
>gb|BT015730.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 990 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 223 tgcggcaccacttggctcaaggcgct 248
>gb|BT014993.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 1053 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 231 tgcggcaccacttggctcaaggcgct 256
>gb|BT011733.1| Arabidopsis thaliana At3g45070 gene, complete cds Length = 972 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 208 tgcggcaccacttggctcaaggcgct 233
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 528 ggtcaccggcgccgccgtcgccggct 553 ||||||||||||||||| |||||||| Sbjct: 33995492 ggtcaccggcgccgccgccgccggct 33995467 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 4214512 caccggcgccgccgtcgacggctgc 4214536 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 12714018 caccggcgccgccgtcgccg 12714037
>emb|AL353992.1|ATF14D17 Arabidopsis thaliana DNA chromosome 3, BAC clone F14D17 Length = 89214 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 81198 tgcggcaccacttggctcaaggcgct 81173 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 78857 tgcggcaccacttggctcaaggcgct 78832
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 4250 tgcggcaccacttggctcaaggcgct 4225 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 tgcggcaccacgtggctcaaggcgct 338 ||||||||||| |||||||||||||| Sbjct: 1909 tgcggcaccacttggctcaaggcgct 1884
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 528 ggtcaccggcgccgccgtcgccggct 553 ||||||||||||||||| |||||||| Sbjct: 34085964 ggtcaccggcgccgccgccgccggct 34085939 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 4214621 caccggcgccgccgtcgacggctgc 4214645 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 12710781 caccggcgccgccgtcgccg 12710800
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 528 ggtcaccggcgccgccgtcgccggct 553 ||||||||||||||||| |||||||| Sbjct: 62199 ggtcaccggcgccgccgccgccggct 62224
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 356 cgcgcgacgcgtacccggcgccggcgcagc 385 |||||||||||| |||||||||||||||| Sbjct: 74722 cgcgcgacgcgtggccggcgccggcgcagc 74693
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 ctcaaggcgctggccttcgcc 348 ||||||||||||||||||||| Sbjct: 1858100 ctcaaggcgctggccttcgcc 1858120
>ref|XM_470543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 105 caccggcgccgccgtcgacggctgc 81
>ref|XM_472069.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 385 cacccgctcctccgcctcaacccgcacgactgc 417 |||||||| || || |||||||||||||||||| Sbjct: 364 cacccgctgctgcgtctcaacccgcacgactgc 396
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 cgtcgacgacggcacggtgccgaagcgcc 133 |||||||||||||||| ||||||| |||| Sbjct: 2440620 cgtcgacgacggcacgctgccgaaccgcc 2440648 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 cgttcacggacgtcgacgacggca 118 |||||||| ||||||||||||||| Sbjct: 1452135 cgttcacgtacgtcgacgacggca 1452158
>ref|XM_955251.1| Neurospora crassa OR74A hypothetical protein (NCU07079.1) partial mRNA Length = 1860 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 acccgctcctccgcctcaacc 406 ||||||||||||||||||||| Sbjct: 1397 acccgctcctccgcctcaacc 1377
>ref|XM_327364.1| Neurospora crassa OR74A hypothetical protein (NCU07079.1) partial mRNA Length = 1860 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 acccgctcctccgcctcaacc 406 ||||||||||||||||||||| Sbjct: 1397 acccgctcctccgcctcaacc 1377
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 cgtcgacgacggcacggtgccgaagcgcc 133 |||||||||||||||| ||||||| |||| Sbjct: 3655766 cgtcgacgacggcacgctgccgaaccgcc 3655794 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 cgttcacggacgtcgacgacggca 118 |||||||| ||||||||||||||| Sbjct: 2678283 cgttcacgtacgtcgacgacggca 2678306
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 ctggacgagatcttcgccgac 447 ||||||||||||||||||||| Sbjct: 3132327 ctggacgagatcttcgccgac 3132307
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 98 tcacggacgtcgacgacggcacggtgccg 126 |||||| |||||||||||||||| ||||| Sbjct: 568146 tcacggtcgtcgacgacggcacgctgccg 568118
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 cgtcgacgacggcacggtgccgaagcgcc 133 |||||||||||||||| ||||||| |||| Sbjct: 3398474 cgtcgacgacggcacgctgccgaaccgcc 3398502 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 cgttcacggacgtcgacgacggca 118 |||||||| ||||||||||||||| Sbjct: 1705187 cgttcacgtacgtcgacgacggca 1705164
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 gccggcctggagctgcggctg 207 ||||||||||||||||||||| Sbjct: 1687523 gccggcctggagctgcggctg 1687543
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgc 417 |||||||| || || |||||||||||||||||| Sbjct: 17196318 cacccgctgctgcgtctcaacccgcacgactgc 17196286 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 tcaccggcgccgccgtcgccggct 553 ||||||||||||||| |||||||| Sbjct: 32886588 tcaccggcgccgccggcgccggct 32886611
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 115149 caccggcgccgccgtcgacggctgc 115173
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctg 339 ||||||| |||||| |||||| ||||||||||| Sbjct: 3928 cccaagtccggcacgacgtggatcaaggcgctg 3896
>dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0035K09 Length = 124866 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 66142 ggcgccgccgtcgccggctgc 66162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 63031 ggcgccgccgtcgccggctgc 63051
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctg 339 ||||||| |||||| |||||| ||||||||||| Sbjct: 120456 cccaagtccggcacgacgtggatcaaggcgctg 120424
>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047H05 Length = 187273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 47599 ggcgccgccgtcgccggctgc 47619 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 ggcgccgccgtcgccggctgc 555 ||||||||||||||||||||| Sbjct: 44488 ggcgccgccgtcgccggctgc 44508
>gb|AE005131.1| Halobacterium sp. NRC-1 section 162 of 170 of the complete genome Length = 11659 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 acgtcgacgacggcacggtgc 124 ||||||||||||||||||||| Sbjct: 1210 acgtcgacgacggcacggtgc 1190
>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full insert sequence Length = 1274 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 307 cccaagtgcggcaccacgtggctcaaggcgctg 339 ||||||| |||||| |||||| ||||||||||| Sbjct: 309 cccaagtccggcacgacgtggatcaaggcgctg 341
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggct 553 ||||||||||||||||||||| Sbjct: 8334 ccggcgccgccgtcgccggct 8354
>dbj|AK070649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062P07, full insert sequence Length = 1036 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 206 caccggcgccgccgtcgacggctgc 182
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 cgtcgacgacggcacggtgccgaagcgcc 133 |||||||||||||||| ||||||| |||| Sbjct: 1450283 cgtcgacgacggcacgctgccgaaccgcc 1450255 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 cgttcacggacgtcgacgacggca 118 |||||||| ||||||||||||||| Sbjct: 2464811 cgttcacgtacgtcgacgacggca 2464788
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 385 cacccgctcctccgcctcaacccgcacgactgc 417 |||||||| || || |||||||||||||||||| Sbjct: 140615 cacccgctgctgcgtctcaacccgcacgactgc 140583
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccggctgc 555 ||||||||||||||||| ||||||| Sbjct: 43127 caccggcgccgccgtcgacggctgc 43151
>ref|XM_550316.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cgcgtacccggcgccggcgc 382 |||||||||||||||||||| Sbjct: 228 cgcgtacccggcgccggcgc 209
>ref|NM_188697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 82 ccggcgccgccgtcgccggc 101
>ref|XM_474100.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 530 tcaccggcgccgccgtcgccggct 553 ||||||||||||||| |||||||| Sbjct: 202 tcaccggcgccgccggcgccggct 179
>ref|XM_464401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 443 ccggcgccgccgtcgccggc 424
>ref|NM_196734.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0094K20.9), mRNA Length = 759 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 gtcaccggcgccgccgtcgccggc 552 |||||||||||||||| ||||||| Sbjct: 394 gtcaccggcgccgccgccgccggc 417
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 1213855 caccggcgccgccgtcgccg 1213836 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 625450 caccggcgccgccgtcgccg 625431
>gb|BC076336.1| Danio rerio zgc:92878, mRNA (cDNA clone MGC:92878 IMAGE:7118150), complete cds Length = 1303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ccgttcctggacgagatctt 440 |||||||||||||||||||| Sbjct: 449 ccgttcctggacgagatctt 468
>ref|XM_959981.1| Neurospora crassa OR74A hypothetical protein (NCU02480.1) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 accggcgccgccgtcgccgg 551 |||||||||||||||||||| Sbjct: 815 accggcgccgccgtcgccgg 796
>ref|XM_331678.1| Neurospora crassa OR74A hypothetical protein (NCU02480.1) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 accggcgccgccgtcgccgg 551 |||||||||||||||||||| Sbjct: 815 accggcgccgccgtcgccgg 796
>ref|XM_543098.2| PREDICTED: Canis familiaris similar to Peroxisomal proliferator-activated receptor A interacting complex 285 kDa protein (PPAR-alpha interacting complex protein 285) (LOC485973), mRNA Length = 8799 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 cggcgccggcgcagcacccg 390 |||||||||||||||||||| Sbjct: 5297 cggcgccggcgcagcacccg 5278
>emb|AJ888887.1| Dalyat mirabilis partial wg gene for wingless Length = 533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccaccatgacgcgcgacgcg 366 |||||||||||||||||||| Sbjct: 127 ccaccatgacgcgcgacgcg 108
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cttcgccaccatgacgcgcg 361 |||||||||||||||||||| Sbjct: 4119406 cttcgccaccatgacgcgcg 4119425
>ref|XM_382969.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02793.1) partial mRNA Length = 3420 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ctggacgagatcttcgccga 446 |||||||||||||||||||| Sbjct: 2375 ctggacgagatcttcgccga 2394
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 accggcgccgccgtcgccgg 551 |||||||||||||||||||| Sbjct: 71327 accggcgccgccgtcgccgg 71346
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 282092 caccggcgccgccgtcgccg 282073
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 282242 caccggcgccgccgtcgccg 282223
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 228035 caccggcgccgccgtcgccg 228016
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 tcaccggcgccgccgtcgccggct 553 ||||||||||||||| |||||||| Sbjct: 29437 tcaccggcgccgccggcgccggct 29460
>ref|NM_001002476.1| Danio rerio zgc:92878 (zgc:92878), mRNA Length = 1303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ccgttcctggacgagatctt 440 |||||||||||||||||||| Sbjct: 449 ccgttcctggacgagatctt 468
>dbj|AB242144.1| Argiope bruennichi CySp1 mRNA for egg case silk protein 1, complete cds Length = 9149 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 7602 gcagcgctgccgcgcaagca 7621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 7062 gcagcgctgccgcgcaagca 7081 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 6522 gcagcgctgccgcgcaagca 6541 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 5982 gcagcgctgccgcgcaagca 6001 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 5442 gcagcgctgccgcgcaagca 5461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 4902 gcagcgctgccgcgcaagca 4921 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 4362 gcagcgctgccgcgcaagca 4381 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 3822 gcagcgctgccgcgcaagca 3841 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 3282 gcagcgctgccgcgcaagca 3301 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 2742 gcagcgctgccgcgcaagca 2761 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 2199 gcagcgctgccgcgcaagca 2218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 1659 gcagcgctgccgcgcaagca 1678 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcagcgctgccgcgcaagca 182 |||||||||||||||||||| Sbjct: 1119 gcagcgctgccgcgcaagca 1138
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cctggacgagatcttcgccg 445 |||||||||||||||||||| Sbjct: 747191 cctggacgagatcttcgccg 747210
>ref|XM_680347.1| PREDICTED: Danio rerio similar to polymerase (RNA) III (DNA directed) polypeptide H (LOC557311), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ccgttcctggacgagatctt 440 |||||||||||||||||||| Sbjct: 268 ccgttcctggacgagatctt 287
>gb|AF318583.1|AF318583 Oryza sativa putative transcription factor OsGLK2 (Glk2) gene, exon 1 and partial cds Length = 789 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 238 ccggcgccgccgtcgccggc 257
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 gtcaccggcgccgccgtcgccggc 552 |||||||||||||||| ||||||| Sbjct: 79973 gtcaccggcgccgccgccgccggc 79996
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 68471 caccggcgccgccgtcgccg 68490
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgcgtacccggcgccggcgc 382 |||||||||||||||||||| Sbjct: 84245 cgcgtacccggcgccggcgc 84264
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 accggcgccgccgtcgccgg 551 |||||||||||||||||||| Sbjct: 4356424 accggcgccgccgtcgccgg 4356405 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caggccggcctggagctgcg 203 |||||||||||||||||||| Sbjct: 3982838 caggccggcctggagctgcg 3982857
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gcgcgacgcgtacccggcgc 376 |||||||||||||||||||| Sbjct: 364030 gcgcgacgcgtacccggcgc 364011
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 102916 ccggcgccgccgtcgccggc 102897
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 21800 ccggcgccgccgtcgccggc 21819
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 95413 ccggcgccgccgtcgccggc 95432
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 acgcgtacccggcgccggcg 381 |||||||||||||||||||| Sbjct: 124706 acgcgtacccggcgccggcg 124687
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 acgcgtacccggcgccggcg 381 |||||||||||||||||||| Sbjct: 4963 acgcgtacccggcgccggcg 4944
>dbj|AK121019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049D13, full insert sequence Length = 2378 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 443 ccggcgccgccgtcgccggc 462
>dbj|AK109503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A09, full insert sequence Length = 1335 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 643 ccggcgccgccgtcgccggc 662
>dbj|AK108100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A12, full insert sequence Length = 1319 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 443 ccggcgccgccgtcgccggc 424
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 acgcgtacccggcgccggcgcagc 385 ||||||||||||||| |||||||| Sbjct: 3972069 acgcgtacccggcgctggcgcagc 3972092
>dbj|AK067497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110O11, full insert sequence Length = 738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 535 caccggcgccgccgtcgccg 516
>dbj|AK067139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O17, full insert sequence Length = 885 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 530 tcaccggcgccgccgtcgccggct 553 ||||||||||||||| |||||||| Sbjct: 348 tcaccggcgccgccggcgccggct 325
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 tcaccggcgccgccgtcgccggct 553 ||||||||||||||| |||||||| Sbjct: 9668 tcaccggcgccgccggcgccggct 9691
>gb|U03114.2|SAU03114 Streptomyces albus lipase precursor (lip) and LipR genes, complete cds; and unknown gene Length = 4855 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 cggcgccgccgtcgccggct 553 |||||||||||||||||||| Sbjct: 4128 cggcgccgccgtcgccggct 4147
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 4708351 ccggcgccgccgtcgccggc 4708370
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 ccggcgccgccgtcgccggc 552 |||||||||||||||||||| Sbjct: 108431 ccggcgccgccgtcgccggc 108450
>gb|AD000004.1|MSGY224 Mycobacterium tuberculosis sequence from clone y224 Length = 40051 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 caccggcgccgccgtcgccg 550 |||||||||||||||||||| Sbjct: 9987 caccggcgccgccgtcgccg 9968
>emb|AL935298.5| Zebrafish DNA sequence from clone CH211-160I12, complete sequence Length = 155911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttccgttcacggacgtcgac 111 |||||||||||||||||||| Sbjct: 104592 ttccgttcacggacgtcgac 104611
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster Length = 21391 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 caggccggcctggagctgcg 203 |||||||||||||||||||| Sbjct: 13354 caggccggcctggagctgcg 13335 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,408,587 Number of Sequences: 3902068 Number of extensions: 3408587 Number of successful extensions: 85585 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78513 Number of HSP's gapped (non-prelim): 7066 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
