>IBP1_PIG (Q75ZP3) Insulin-like growth factor-binding protein 1 precursor|
           (IGFBP-1) (IBP-1) (IGF-binding protein 1)
          Length = 262

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 21/54 (38%), Positives = 24/54 (44%)
 Frame = +2

Query: 137 PQRTATAAWTNEEDKAFENAIAAGAPPPLDGVPEDAWFVALVASVPARSTEEVR 298
           P+  A  AW      A +   AAGAP PL   P  A  +AL   VPA   E  R
Sbjct: 2   PEVPAVRAWPLLLSLALQLGAAAGAPQPLHCAPCSAERLALCPPVPASCPEATR 55

>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 30/96 (31%), Positives = 33/96 (34%)
 Frame = +2

Query: 2   PAAKGSATHPTDPART*PAADSHLLPRG*GSAPPCTAVAGQPTMAPQRTATAAWTNEEDK 181
           P   GS   P       PAA+    P   G+APP    A  P       A  A    E  
Sbjct: 395 PPPPGSEPEPV------PAAEGEAAPAAEGAAPPAEGAA-PPAEGAVPPADGAAPPAEGA 447

Query: 182 AFENAIAAGAPPPLDGVPEDAWFVALVASVPARSTE 289
           A     A GA PP DG    A   A  A   A + E
Sbjct: 448 A---PAAEGAAPPADGAAPPAEAAAAPADAAAPAAE 480

>K0776_HUMAN (O94874) Protein KIAA0776|
          Length = 794

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 119 RRRRCTEGRSLIRGEGGGNRR 57
           RRR+ TEG   +RG GGGN R
Sbjct: 421 RRRKATEGSGSMRGGGGGNAR 441

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 31/104 (29%), Positives = 37/104 (35%)
 Frame = +2

Query: 2   PAAKGSATHPTDPART*PAADSHLLPRG*GSAPPCTAVAGQPTMAPQRTATAAWTNEEDK 181
           PAA   A     P    PA  +   P G  + PP  A A  P  A Q   +A        
Sbjct: 258 PAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG------A 311

Query: 182 AFENAIAAGAPPPLDGVPEDAWFVALVASVPARSTEEVRRHYEA 313
           A   A AAG P  + G P      A  A  P    E  +R  +A
Sbjct: 312 APAPAPAAGGPAGVSGQPGPG--AAAAAPAPGVKAESPKRVVQA 353

>K0776_MOUSE (Q8CCJ3) Protein KIAA0776|
          Length = 793

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 119 RRRRCTEGRSLIRGEGGGNRR 57
           RR++ TEG   +RG GGGN R
Sbjct: 421 RRKKATEGSGSVRGGGGGNAR 441

>K0776_CHICK (Q5ZMG1) Protein KIAA0776 homolog|
          Length = 789

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 119 RRRRCTEGRSLIRGEGGGNRR 57
           RR++ TEG   +RG GGGN R
Sbjct: 421 RRKKATEGSGSVRGGGGGNAR 441

>Y542_GLOVI (Q7NN71) UPF0272 protein gll0542|
          Length = 421

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +2

Query: 227 GVPEDAWFVALVASVPARSTEEVRRHYEALVEDVGAIDAGRVPLLRYAG 373
           GVP D + +A +A +P    +E R H+E +V++  A    RVPL   AG
Sbjct: 25  GVPAD-YLIAQLAKLPMH--DEYRLHFERVVKNGVAATKARVPLGERAG 70

>Y751_TREPA (O83732) Hypothetical protein TP0751 precursor|
          Length = 237

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
 Frame = +2

Query: 8   AKGSATHPTDPART*PAADSHLLPRG*GSAPPCT--AVAGQPTMAPQRTA--TAAW---T 166
           A+ +A HP+D A     + +   PR  G+APP      A   T  P +TA   A W   T
Sbjct: 53  ARDTAAHPSDTADNTSGSSTTTDPRSHGNAPPAPVGGAAQTHTQPPVQTAMRIALWNRAT 112

Query: 167 NEEDKAFENAIA 202
           + E  A ++ +A
Sbjct: 113 HGEQGALQHLLA 124

>SYS_RHILO (Q98LC8) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 434

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +2

Query: 170 EEDKAFENAIAAGAPPPLDGVP-----EDAWFVALVASVPARSTEEVRRHYEALVEDVGA 334
           E DKA  +A+A     PLD VP      D     +V  VP RS   V+ H+E + E +G 
Sbjct: 98  ELDKALTDALAVLPNVPLDDVPVGKDEHDNVVKHIVGKVPTRS-NWVKEHFE-IGEALGM 155

Query: 335 IDAGRVPLL 361
           +D  R   L
Sbjct: 156 MDFERAAKL 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.129    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,421,457
Number of Sequences: 219361
Number of extensions: 800142
Number of successful extensions: 2428
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)