ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41h09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 389 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 448 Query: 525 ggctgttcttgctggggctgga 546 |||||||||||||||||||||| Sbjct: 449 ggctgttcttgctggggctgga 470 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 179 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 238 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 239 acgcgggccgcgtcccgctcccgcgctacgccggggagga 278 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgcggccggcgcac 212 ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 44 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcgtgcgcgg 103 Query: 213 cgccgccgc 221 ||||||||| Sbjct: 104 cgccgccgc 112
>dbj|AK068565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154G12, full insert sequence Length = 1329 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 423 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 482 Query: 525 ggctgttcttgctggggctgga 546 |||||||||||||||||||||| Sbjct: 483 ggctgttcttgctggggctgga 504 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 213 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 272 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 273 acgcgggccgcgtcccgctcccgcgctacgccggggagga 312 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgc 201 ||||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 144 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgc 192
>gb|AY151042.1| Oryza sativa (japonica cultivar-group) transcription factor MYBS1 mRNA, complete cds Length = 1330 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 408 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 467 Query: 525 ggctgttcttgctggggctgga 546 |||||||||||||||||||||| Sbjct: 468 ggctgttcttgctggggctgga 489 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 198 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 257 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 258 acgcgggccgcgtcccgctcccgcgctacgccggggagga 297 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgcggccggcgcac 212 ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 63 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcttgcgcgg 122 Query: 213 cgccgccgc 221 ||||||||| Sbjct: 123 cgccgccgc 131
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 139136 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 139195 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 139196 acgcgggccgcgtcccgctcccgcgctacgccggggagga 139235 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 139346 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 139405 Query: 525 gg 526 || Sbjct: 139406 gg 139407 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgcggccggcgcac 212 ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 139001 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcgtgcgcgg 139060 Query: 213 cgccgccgc 221 ||||||||| Sbjct: 139061 cgccgccgc 139069 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 caggctgttcttgctggggctgga 546 |||||||||||||||||||||||| Sbjct: 139525 caggctgttcttgctggggctgga 139548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 18751690 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 18751749 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 18751750 acgcgggccgcgtcccgctcccgcgctacgccggggagga 18751789 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 18751900 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 18751959 Query: 525 gg 526 || Sbjct: 18751960 gg 18751961 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgcggccggcgcac 212 ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 18751555 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcgtgcgcgg 18751614 Query: 213 cgccgccgc 221 ||||||||| Sbjct: 18751615 cgccgccgc 18751623 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 caggctgttcttgctggggctgga 546 |||||||||||||||||||||||| Sbjct: 18752079 caggctgttcttgctggggctgga 18752102 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 23757535 ccgtggagcgaggaggagcaccggctgttc 23757564 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtgcaccgccgtcgccgg 120 |||||||||||||||||||| Sbjct: 42404902 ccgtgcaccgccgtcgccgg 42404883 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 ccgcggcggcgactgcggcggcgc 410 ||||||||||||| |||||||||| Sbjct: 37239809 ccgcggcggcgaccgcggcggcgc 37239832 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tcccgtggaccgaggaggagcaca 524 |||||||||| ||||||||||||| Sbjct: 36758064 tcccgtggacggaggaggagcaca 36758041 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||||| ||||||||| Sbjct: 34484261 gccgcggcggcgacggcggcggcg 34484238
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1249E06 Length = 126534 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 279 ggtcgacggaggaggtgcggcgccattacgaggccctggttgaggacgtcggcgcgatcg 338 ||||| |||||||||||||| | || |||||||| ||||| |||||||||| || |||| Sbjct: 73207 ggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcg 73266 Query: 339 acgccggccgcgtccccctcctccgctatgccggggagga 378 |||| ||||||||||| |||| ||||| ||||||||||| Sbjct: 73267 acgcgggccgcgtcccgctcccgcgctacgccggggagga 73306 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 73417 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 73476 Query: 525 gg 526 || Sbjct: 73477 gg 73478 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 153 cggcggcgtggaccaacgaggaggacaaggcgttcgagaacgcgatcgcggccggcgcac 212 ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 73072 cggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcgtgcgcgg 73131 Query: 213 cgccgccgc 221 ||||||||| Sbjct: 73132 cgccgccgc 73140 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 caggctgttcttgctggggctgga 546 |||||||||||||||||||||||| Sbjct: 73596 caggctgttcttgctggggctgga 73619
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 16213234 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 16213175 Query: 525 gg 526 || Sbjct: 16213174 gg 16213173 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 caggctgttcttgctggggctgga 546 |||||||||||||||||||||||| Sbjct: 16213023 caggctgttcttgctggggctgga 16213000 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 tccgccgcggcggcgactgcggcggcgcct 412 ||||||||||||||| | |||||||||||| Sbjct: 34631017 tccgccgcggcggcggcagcggcggcgcct 34630988 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacagg 526 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||| Sbjct: 34593895 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacagg 34593848 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 24228707 gccgcggcggcggctgcggcggcg 24228730
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 465 gctgctccaaggccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcaca 524 ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 58149 gctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcaca 58090 Query: 525 gg 526 || Sbjct: 58089 gg 58088 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 caggctgttcttgctggggctgga 546 |||||||||||||||||||||||| Sbjct: 57938 caggctgttcttgctggggctgga 57915
>dbj|AK068138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D01, full insert sequence Length = 1988 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 494 aagggcatcccgtggaccgaggaggagcacaggctgttcttgctggggctg 544 |||||| | |||||||| ||||||||||||| | |||||||| |||||||| Sbjct: 840 aagggcgtgccgtggacagaggaggagcacaagttgttcttgatggggctg 890
>ref|XM_474343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacaggctgttc 532 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||||||||| Sbjct: 409 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacaggctgttc 462
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 178 caaggcgttcgagaacgcgatcgcgg 203 |||||||||||||||||||||||||| Sbjct: 408194 caaggcgttcgagaacgcgatcgcgg 408169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 caaggcgttcgagaacgcgat 198 ||||||||||||||||||||| Sbjct: 5025511 caaggcgttcgagaacgcgat 5025491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gcgcaccgccgccgctggac 226 |||||||||||||||||||| Sbjct: 6306567 gcgcaccgccgccgctggac 6306586
>dbj|AK106166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B07, full insert sequence Length = 1465 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacaggctgttc 532 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||||||||| Sbjct: 609 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacaggctgttc 662 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 cgaggaggacaaggcgttcgagaacgcg 196 |||| |||| |||||||||||||||||| Sbjct: 305 cgagcaggagaaggcgttcgagaacgcg 332
>dbj|AK068623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153N23, full insert sequence Length = 1460 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacaggctgttc 532 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||||||||| Sbjct: 651 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacaggctgttc 704 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 cgaggaggacaaggcgttcgagaacgcg 196 |||| |||| |||||||||||||||||| Sbjct: 347 cgagcaggagaaggcgttcgagaacgcg 374
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 242 gcctggttcgtggcgctggtggccagcgtgccg 274 |||||||||| ||| |||||||||||||||||| Sbjct: 3045514 gcctggttcgcggcactggtggccagcgtgccg 3045546
>ref|NM_190651.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 501 tcccgtggaccgaggaggagcacaggctgttcttgctggggctg 544 |||||||||| ||||||||||||| | ||||||| |||||||| Sbjct: 410 tcccgtggacggaggaggagcacaagtcgttcttgatggggctg 453
>dbj|AK111988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C10, full insert sequence Length = 1502 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 501 tcccgtggaccgaggaggagcacaggctgttcttgctggggctg 544 |||||||||| ||||||||||||| | ||||||| |||||||| Sbjct: 490 tcccgtggacggaggaggagcacaagtcgttcttgatggggctg 533
>emb|AJ303354.1|HVU303354 Hordeum vulgare cv. Haisa mRNA for MCB1 protein Length = 1115 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacagg 526 |||||||||||||||||||||||| Sbjct: 318 ccgtggaccgaggaggagcacagg 341
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 180 aggcgttcgagaacgcgatcgcgg 203 |||||||||||||||||||||||| Sbjct: 4027711 aggcgttcgagaacgcgatcgcgg 4027688 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 cgctggtggccagcgtgccgg 275 ||||||||||||||||||||| Sbjct: 1588824 cgctggtggccagcgtgccgg 1588804
>emb|AJ965495.1| Hordeum vulgare mcb1 gene, exons 1-5 Length = 1515 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacagg 526 |||||||||||||||||||||||| Sbjct: 673 ccgtggaccgaggaggagcacagg 696
>ref|XM_467185.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2082 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 505 gtggaccgaggaggagcacaggctgttcttg 535 |||||| || ||||||||||||||||||||| Sbjct: 396 gtggacggacgaggagcacaggctgttcttg 426
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 ccgcggcggcgactgcggcggcg 409 ||||||||||||||||||||||| Sbjct: 74888 ccgcggcggcgactgcggcggcg 74866
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 ccgcggcggcgactgcggcggcg 409 ||||||||||||||||||||||| Sbjct: 18884 ccgcggcggcgactgcggcggcg 18862
>gb|AC162365.5| Mus musculus chromosome 19, clone RP23-75P11, complete sequence Length = 157286 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 515 gaggagcacaggctgttcttgctgggg 541 |||||||||||| |||||||||||||| Sbjct: 131190 gaggagcacaggttgttcttgctgggg 131164
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 387 ccgcggcggcgactgcggcggcg 409 ||||||||||||||||||||||| Sbjct: 16227531 ccgcggcggcgactgcggcggcg 16227509 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 ccgcggcggcgactgcggcggcgcc 411 ||||||||||||| ||||||||||| Sbjct: 1583563 ccgcggcggcgacggcggcggcgcc 1583539 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 10987502 gcggcggcgactgcggcggc 10987521
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 gtggaccgaggaggagcacaggctgttcttg 535 |||||| || ||||||||||||||||||||| Sbjct: 28061969 gtggacggacgaggagcacaggctgttcttg 28061939 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 33475554 cgccgcggcggcgacggcggcggcg 33475530 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 379 atcttccgccgc-ggcggcgactgcggcggcg 409 |||||||||||| ||||||||| ||||||||| Sbjct: 6598389 atcttccgccgcgggcggcgacggcggcggcg 6598420
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 gtggaccgaggaggagcacaggctgttcttg 535 |||||| || ||||||||||||||||||||| Sbjct: 105631 gtggacggacgaggagcacaggctgttcttg 105601
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 gtggaccgaggaggagcacaggctgttcttg 535 |||||| || ||||||||||||||||||||| Sbjct: 51616 gtggacggacgaggagcacaggctgttcttg 51586
>dbj|AK111726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036F23, full insert sequence Length = 2083 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 505 gtggaccgaggaggagcacaggctgttcttg 535 |||||| || ||||||||||||||||||||| Sbjct: 397 gtggacggacgaggagcacaggctgttcttg 427
>dbj|AK106384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E04, full insert sequence Length = 1236 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 387 ccgcggcggcgactgcggcggcg 409 ||||||||||||||||||||||| Sbjct: 905 ccgcggcggcgactgcggcggcg 927
>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence Length = 171837 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 515 gaggagcacaggctgttcttgctgggg 541 |||||||||||| |||||||||||||| Sbjct: 92604 gaggagcacaggttgttcttgctgggg 92630
>ref|XM_474348.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 tccgccgcggcggcgactgcggcggcgcct 412 ||||||||||||||| | |||||||||||| Sbjct: 340 tccgccgcggcggcggcagcggcggcgcct 311
>ref|NM_192660.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 400 ccgtggagcgaggaggagcaccggctgttc 429
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ccgccgcggcggcgactgcggcggcg 409 |||||||||||||||| ||||||||| Sbjct: 40088 ccgccgcggcggcgacggcggcggcg 40063
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 ccgtggaccgaggaggagcaca 524 |||||||||||||||||||||| Sbjct: 94289 ccgtggaccgaggaggagcaca 94268
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 tccgccgcggcggcgactgcggcggcgcct 412 ||||||||||||||| | |||||||||||| Sbjct: 85139 tccgccgcggcggcggcagcggcggcgcct 85110 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacagg 526 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||| Sbjct: 48016 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacagg 47969
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ccgccgcggcggcgactgcggcggcg 409 |||||||||||||||| ||||||||| Sbjct: 19256872 ccgccgcggcggcgacggcggcggcg 19256847 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 22127169 gcggcggcgactgcggcggcg 22127149 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ggcggcgactgcggcggcgc 410 |||||||||||||||||||| Sbjct: 9374129 ggcggcgactgcggcggcgc 9374148
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 135239 ccgtggagcgaggaggagcaccggctgttc 135268
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 38120 ccgtggagcgaggaggagcaccggctgttc 38149
>dbj|AK107505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E05, full insert sequence Length = 1644 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 tccgccgcggcggcgactgcggcggcgcct 412 ||||||||||||||| | |||||||||||| Sbjct: 49 tccgccgcggcggcggcagcggcggcgcct 20
>dbj|AK103432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128P13, full insert sequence Length = 1490 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 625 ccgtggagcgaggaggagcaccggctgttc 654
>dbj|AK061500.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D10, full insert sequence Length = 1162 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ccgtggaccgaggaggagcacaggctgttc 532 ||||||| ||||||||||||| |||||||| Sbjct: 391 ccgtggagcgaggaggagcaccggctgttc 420
>gb|AY107715.1| Zea mays PCO092156 mRNA sequence Length = 390 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 476 gccgagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacag 525 |||||||||||||| | ||||||||| | ||||| ||||| |||||||| Sbjct: 53 gccgagcaggagcgtaggaagggcatcgcctggacagaggacgagcacag 102
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 383 tccgccgcggcggcgactgcggcggcgcct 412 ||||||||||||||| | |||||||||||| Sbjct: 36746 tccgccgcggcggcggcagcggcggcgcct 36717
>emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 on chromosome 3, complete sequence Length = 107411 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 ccgtggaccgaggaggagcaca 524 |||||||||||||||||||||| Sbjct: 51 ccgtggaccgaggaggagcaca 30
>ref|XM_529827.1| PREDICTED: Pan troglodytes LOC454514 (LOC454514), mRNA Length = 3345 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 2727 gcggcggcgactgcggcggcg 2707
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 48 cgccgcggcggcgacggcggcggcg 24
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 caaggcgttcgagaacgcgat 198 ||||||||||||||||||||| Sbjct: 2174722 caaggcgttcgagaacgcgat 2174742
>ref|XM_476749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 38 gcggcggcgactgcggcggcg 18
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 caaggcgttcgagaacgcgat 198 ||||||||||||||||||||| Sbjct: 6018362 caaggcgttcgagaacgcgat 6018382
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 ccgcggcggcgactgcggcggcgcc 411 ||||||||||||| ||||||||||| Sbjct: 35723 ccgcggcggcgacggcggcggcgcc 35699
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 aaggcgttcgagaacgcgatcgcgg 203 ||||||||||||||||| ||||||| Sbjct: 1373780 aaggcgttcgagaacgccatcgcgg 1373756
>ref|XM_592539.2| PREDICTED: Bos taurus similar to family with sequence similarity 46, member A, transcript variant 1 (LOC540234), mRNA Length = 1617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 209 gcggcggcgactgcggcggcg 229
>ref|XM_872327.1| PREDICTED: Bos taurus similar to family with sequence similarity 46, member A, transcript variant 2 (LOC540234), mRNA Length = 1211 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 351 gcggcggcgactgcggcggcg 371
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgatcgcggccggcgcaccgccgcc 219 |||||||||||| |||||||||||| Sbjct: 787219 cgatcgcggccgccgcaccgccgcc 787243
>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence Length = 191322 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 gagcacaggctgttcttgctg 538 ||||||||||||||||||||| Sbjct: 76899 gagcacaggctgttcttgctg 76919
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gagcaggagcggcgcaagggc 499 ||||||||||||||||||||| Sbjct: 3223541 gagcaggagcggcgcaagggc 3223561
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 33155580 cgccgcggcggcgacggcggcggcg 33155556 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 31886150 gcggcggcgactgcggcggc 31886131 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||||||||||||| | ||||||||||| Sbjct: 29721066 ccgccgcggcggcgccggcggcggcgcc 29721039
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 caaggcgttcgagaacgcgat 198 ||||||||||||||||||||| Sbjct: 2667026 caaggcgttcgagaacgcgat 2667046
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 caaggcgttcgagaacgcgat 198 ||||||||||||||||||||| Sbjct: 226491 caaggcgttcgagaacgcgat 226511
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgatcgcggccggcgcaccgccgcc 219 |||||||||||| |||||||||||| Sbjct: 2107462 cgatcgcggccgccgcaccgccgcc 2107486
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgatcgcggccggcgcaccgccgcc 219 |||||||||||| |||||||||||| Sbjct: 1681875 cgatcgcggccgccgcaccgccgcc 1681899
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 3746207 gcggcggcgactgcggcggcg 3746227
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 33246090 cgccgcggcggcgacggcggcggcg 33246066 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 31976666 gcggcggcgactgcggcggc 31976647 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||||||||||||| | ||||||||||| Sbjct: 29812488 ccgccgcggcggcgccggcggcggcgcc 29812461
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 88975 cgccgcggcggcgacggcggcggcg 88999
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 48662 gcggcggcgactgcggcggcg 48642
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 90558 gcggcggcgactgcggcggcg 90578
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 50429 cgccgcggcggcgacggcggcggcg 50405
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cgccgcggcggcgactgcggcggcg 409 ||||||||||||||| ||||||||| Sbjct: 106173 cgccgcggcggcgacggcggcggcg 106149
>dbj|AK069751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I10, full insert sequence Length = 1218 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggcg 409 ||||||||||||||||||||| Sbjct: 68 gcggcggcgactgcggcggcg 48
>gb|AF088845.1|AF088845 Pseudarchaster parelli 28S large subunit ribosomal RNA gene, partial sequence Length = 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 cgcggccggcgcaccgccgcc 219 ||||||||||||||||||||| Sbjct: 77 cgcggccggcgcaccgccgcc 97
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 atcgcggccggcgcaccgccgccg 220 ||||||| |||||||||||||||| Sbjct: 576240 atcgcgggcggcgcaccgccgccg 576217
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 cgccggccgcgtccccctcc 359 |||||||||||||||||||| Sbjct: 878447 cgccggccgcgtccccctcc 878428
>ref|XM_482957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1103 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 29 cggcggcgactgcggcggcg 48
>ref|XM_481000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcgcct 412 |||||||||||||||||| ||||| Sbjct: 53 gcggcggcgactgcggcgccgcct 76
>ref|NM_184910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2067 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 1939 gcggcggcgactgcggcggc 1958
>ref|XM_464667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3020 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 379 atcttccgccgc-ggcggcgactgcggcggcg 409 |||||||||||| ||||||||| ||||||||| Sbjct: 68 atcttccgccgcgggcggcgacggcggcggcg 99
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggacgtcggcgcgatcgac 340 |||||||||||||||||||| Sbjct: 591823 aggacgtcggcgcgatcgac 591842
>ref|NM_191047.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||||| ||||||||| Sbjct: 1009 gccgcggcggcgacggcggcggcg 1032
>ref|NM_189366.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtgcaccgccgtcgccgg 120 |||||||||||||||||||| Sbjct: 455 ccgtgcaccgccgtcgccgg 436
>ref|XM_472941.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 139 gccgcggcggcggctgcggcggcg 162
>gb|AC005575.1| Homo sapiens chromosome 5, BAC clone 246j10 (LBNL H186), complete sequence Length = 48645 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggc 405 |||||||||||||||| ||||||| Sbjct: 22201 ttccgccgcggcggcggctgcggc 22224
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctgttcttgctggggctgg 545 |||||||||||||||||||| Sbjct: 81037 gctgttcttgctggggctgg 81056
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 aggcgttcgagaacgcgatcgcgg 203 |||||||||||||||| ||||||| Sbjct: 221012 aggcgttcgagaacgccatcgcgg 220989
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 156706 gcggcggcgactgcggcggc 156725
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||||||||||||| | ||||||||||| Sbjct: 50311 ccgccgcggcggcgccggcggcggcgcc 50338
>ref|NM_004631.3| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 1, mRNA Length = 4528 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 773 ttccgctgcggcggcgatggcggcggcgcctg 804
>ref|NM_001018054.1| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 4, mRNA Length = 4351 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 773 ttccgctgcggcggcgatggcggcggcgcctg 804
>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 14792 gcggcggcgactgcggcggc 14811
>ref|XM_001004429.1| PREDICTED: Mus musculus hypothetical protein LOC673094 (LOC673094), mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgcggcggcgactgcggcgg 407 |||||||||||||||||||| Sbjct: 223 cgcggcggcgactgcggcgg 242
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cgctggacggcgtgccggag 238 |||||||||||||||||||| Sbjct: 1304320 cgctggacggcgtgccggag 1304301
>emb|AL355483.14| Human DNA sequence from clone RP4-784A16 on chromosome 1 Contains the 3' end of the LRP8 gene for low density lipoprotein receptor-related protein 8 apolipoprotein e receptor, five novel genes and a CpG island, complete sequence Length = 80255 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 12894 ttccgctgcggcggcgatggcggcggcgcctg 12863
>gb|DQ352906.1| Dilobocondyla sp. CSM-2006 abdominal-A (AbdA) gene, partial cds Length = 645 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gccgcggcggcgactgcggcggcg 409 ||||||||| |||||||||||||| Sbjct: 416 gccgcggcgtcgactgcggcggcg 393
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 gggctgctccaaggccgagcaggagcgg 490 ||||||||||||| ||| |||||||||| Sbjct: 108339 gggctgctccaagtccgggcaggagcgg 108312
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gtggcgctggtggccagcgtgccg 274 |||||| ||||||||||||||||| Sbjct: 181006 gtggcgttggtggccagcgtgccg 181029
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aggcgttcgagaacgcgatc 199 |||||||||||||||||||| Sbjct: 1062160 aggcgttcgagaacgcgatc 1062141
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 aggcgttcgagaacgcgatcgcgg 203 |||||||||||||||| ||||||| Sbjct: 220900 aggcgttcgagaacgccatcgcgg 220877
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggcgctggtggccagcgtgccggc 276 ||||||||||| |||||||||||| Sbjct: 13747 ggcgctggtggtcagcgtgccggc 13770
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcgctggtggccagcgtgc 272 |||||||||||||||||||| Sbjct: 267812 ggcgctggtggccagcgtgc 267793
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggcgctggtggccagcgtgccggc 276 ||||||||||| |||||||||||| Sbjct: 308326 ggcgctggtggtcagcgtgccggc 308349
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcgctggtggccagcgtgc 272 |||||||||||||||||||| Sbjct: 339486 ggcgctggtggccagcgtgc 339467
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggcgctggtggccagcgtgc 272 |||||||||||||||||||| Sbjct: 336590 ggcgctggtggccagcgtgc 336609
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggcgctggtggccagcgtgccggc 276 ||||||||||| |||||||||||| Sbjct: 46337 ggcgctggtggtcagcgtgccggc 46360
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 aggcgttcgagaacgcgatcgcgg 203 |||||||||||||||| ||||||| Sbjct: 221092 aggcgttcgagaacgccatcgcgg 221069
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 cgagaacgcgatcgcggccggcgc 210 ||||||||||||||| |||||||| Sbjct: 229547 cgagaacgcgatcgccgccggcgc 229524
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 51119 gccgcggcggcggctgcggcggcg 51142
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 117932 gccgcggcggcggctgcggcggcg 117955
>gb|BC051836.1| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, transcript variant 4, mRNA (cDNA clone MGC:60136 IMAGE:6143442), complete cds Length = 3322 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 773 ttccgctgcggcggcgatggcggcggcgcctg 804
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gccgagcaggagcggcgcaa 495 |||||||||||||||||||| Sbjct: 339376 gccgagcaggagcggcgcaa 339357
>gb|AE005688.1| Caulobacter crescentus CB15 section 14 of 359 of the complete genome Length = 14376 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gcgcgatcgacgccggccgcgtcc 353 |||||||||||| ||||||||||| Sbjct: 4159 gcgcgatcgacggcggccgcgtcc 4136
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 810728 cggcggcgactgcggcggcg 810709
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggacaaggcgttcgagaacg 194 |||||||||||||||||||| Sbjct: 348872 ggacaaggcgttcgagaacg 348853
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgcgtccccctcctccgc 364 |||||||||||||||||||| Sbjct: 21243060 gccgcgtccccctcctccgc 21243041
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 23546904 cggcggcgactgcggcggcg 23546885 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcgcct 412 |||||||||||||||||| ||||| Sbjct: 9162047 gcggcggcgactgcggcgccgcct 9162070
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||| ||||||||| ||||||||||||| Sbjct: 5688517 ccgcggcggcggcggctgcggcggcgcc 5688544
>dbj|D86407.2| Homo sapiens genes for ApoER2, ApoER2delta4-7, complete cds Length = 7270 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 1800 ttccgctgcggcggcgatggcggcggcgcctg 1831
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtgcaccgccgtcgccgg 120 |||||||||||||||||||| Sbjct: 64240 ccgtgcaccgccgtcgccgg 64221
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 5571689 cggcggcgactgcggcggcg 5571708
>gb|AC011379.7| Homo sapiens chromosome 5 clone CTB-131B5, complete sequence Length = 170797 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 ttccgccgcggcggcgactgcggc 405 |||||||||||||||| ||||||| Sbjct: 61228 ttccgccgcggcggcggctgcggc 61205
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||||| ||||||||| Sbjct: 166605 gccgcggcggcgacggcggcggcg 166582
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 ccgcggcggcgactgcggcggcgc 410 ||||||||||||| |||||||||| Sbjct: 114465 ccgcggcggcgaccgcggcggcgc 114488
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 ccgcggcggcgactgcggcggcgc 410 ||||||||||||| |||||||||| Sbjct: 76798 ccgcggcggcgaccgcggcggcgc 76821
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tcccgtggaccgaggaggagcaca 524 |||||||||| ||||||||||||| Sbjct: 84379 tcccgtggacggaggaggagcaca 84356
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||||| ||||||||| Sbjct: 59980 gccgcggcggcgacggcggcggcg 59957
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 ccgcggcggcgactgcggcggcgc 410 ||||||||||||| |||||||||| Sbjct: 5093891 ccgcggcggcgaccgcggcggcgc 5093914 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aggcgttcgagaacgcgatcgcgg 203 |||||||||||||||| ||||||| Sbjct: 1301605 aggcgttcgagaacgccatcgcgg 1301628 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gtcggcgcgatcgacgccgg 345 |||||||||||||||||||| Sbjct: 416642 gtcggcgcgatcgacgccgg 416661
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||| ||||||||| ||||||||||||| Sbjct: 4046 ccgcggcggcggcggctgcggcggcgcc 4073
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||| ||||||||| ||||||||||||| Sbjct: 80664 ccgcggcggcggcggctgcggcggcgcc 80691
>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0024J13 Length = 127614 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ggcggcgactgcggcggcgc 410 |||||||||||||||||||| Sbjct: 57543 ggcggcgactgcggcggcgc 57562
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 379 atcttccgccgc-ggcggcgactgcggcggcg 409 |||||||||||| ||||||||| ||||||||| Sbjct: 32764 atcttccgccgcgggcggcgacggcggcggcg 32795
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggcgcct 412 |||||||||||||||||| ||||| Sbjct: 97541 gcggcggcgactgcggcgccgcct 97564
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 26679 cggcggcgactgcggcggcg 26660
>dbj|AK109813.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H03, full insert sequence Length = 1417 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgtgcaccgccgtcgccgg 120 |||||||||||||||||||| Sbjct: 580 ccgtgcaccgccgtcgccgg 561
>dbj|AK105312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-D06, full insert sequence Length = 1413 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||| ||||||||| ||||||||||||| Sbjct: 413 ccgcggcggcggcggctgcggcggcgcc 440
>dbj|AK103188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121M03, full insert sequence Length = 1497 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ccgccgcggcggcgactgcggcggcgcc 411 |||| ||||||||| ||||||||||||| Sbjct: 545 ccgcggcggcggcggctgcggcggcgcc 572
>ref|NM_211777.1| Eremothecium gossypii AGR050Wp (AGR050W), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 534 cggcggcgactgcggcggcg 515
>ref|NM_210065.1| Eremothecium gossypii AEL149Cp (AEL149C), mRNA Length = 2184 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggacaaggcgttcgagaacg 194 |||||||||||||||||||| Sbjct: 1662 ggacaaggcgttcgagaacg 1681
>dbj|AK069216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011K15, full insert sequence Length = 1103 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cggcggcgactgcggcggcg 409 |||||||||||||||||||| Sbjct: 29 cggcggcgactgcggcggcg 48
>dbj|AK069013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001P21, full insert sequence Length = 1262 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 140 gccgcggcggcggctgcggcggcg 163
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 ggtggccagcgtgccggccc 278 |||||||||||||||||||| Sbjct: 4183767 ggtggccagcgtgccggccc 4183748
>dbj|AK066996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089H24, full insert sequence Length = 3020 Score = 40.1 bits (20), Expect = 7.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 379 atcttccgccgc-ggcggcgactgcggcggcg 409 |||||||||||| ||||||||| ||||||||| Sbjct: 68 atcttccgccgcgggcggcgacggcggcggcg 99
>gb|AF088836.1|AF088836 Brisingaster robillardi 28S large subunit ribosomal RNA gene, partial sequence Length = 299 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 gcggccggcgcaccgccgcc 219 |||||||||||||||||||| Sbjct: 113 gcggccggcgcaccgccgcc 132
>dbj|AK066374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C14, full insert sequence Length = 2073 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 208 gcggcggcgactgcggcggc 227
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctgttcttgctggggctgg 545 |||||||||||||||||||| Sbjct: 5114 gctgttcttgctggggctgg 5133
>dbj|AK061463.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B12, full insert sequence Length = 1130 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 126 gccgcggcggcggctgcggcggcg 149
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||||| ||||||||| Sbjct: 32357 gccgcggcggcgacggcggcggcg 32334
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cgaggaggacaaggcgttcgagaacgcg 196 |||| |||| |||||||||||||||||| Sbjct: 47583 cgagcaggagaaggcgttcgagaacgcg 47556 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 479 gagcaggagcggcgcaagggcatcccgtggaccgaggaggagcacagg 526 ||||||||||| || ||||| ||| | ||||| ||||| ||||||||| Sbjct: 47273 gagcaggagcgccggaaggggatcgcctggacggaggacgagcacagg 47226
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 gccgcggcggcgactgcggcggcg 409 |||||||||||| ||||||||||| Sbjct: 23423 gccgcggcggcggctgcggcggcg 23446
>dbj|D50678.1| Homo sapiens mRNA for apolipoprotein E receptor 2, complete cds Length = 4468 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 382 ttccgccgcggcggcgactgcggcggcgcctg 413 |||||| |||||||||| ||||||||||||| Sbjct: 733 ttccgctgcggcggcgatggcggcggcgcctg 764
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 tcgagaacgcgatcgcggccggcg 209 |||| ||||||||||||||||||| Sbjct: 1553027 tcgacaacgcgatcgcggccggcg 1553050 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gcgatcgacgccggccgcgt 351 |||||||||||||||||||| Sbjct: 1079613 gcgatcgacgccggccgcgt 1079632
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 tcgagaacgcgatcgcggccggcg 209 |||||||||||||||||| ||||| Sbjct: 860026 tcgagaacgcgatcgcggacggcg 860003
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgcgtccccctcctccgc 364 |||||||||||||||||||| Sbjct: 21169269 gccgcgtccccctcctccgc 21169250
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gccgcgtccccctcctccgc 364 |||||||||||||||||||| Sbjct: 47140 gccgcgtccccctcctccgc 47159
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cggcgcgatcgacgccggcc 347 |||||||||||||||||||| Sbjct: 359801 cggcgcgatcgacgccggcc 359782
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gcggcggcgactgcggcggc 408 |||||||||||||||||||| Sbjct: 87403 gcggcggcgactgcggcggc 87384
>gb|BC039142.1| Mus musculus, clone IMAGE:4206343, mRNA Length = 985 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgcggcggcgactgcggcgg 407 |||||||||||||||||||| Sbjct: 26 cgcggcggcgactgcggcgg 7 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,714,636 Number of Sequences: 3902068 Number of extensions: 3714636 Number of successful extensions: 100217 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 91851 Number of HSP's gapped (non-prelim): 8429 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
