ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41h08 |
|---|---|
| Clone Library Name | barley_pub |
>MAVI_CUCPE (P80728) Mavicyanin| Length = 108 Score = 108 bits (271), Expect = 8e-24 Identities = 45/98 (45%), Positives = 67/98 (68%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 ++VG S+GWT L +YA WA+ F VGD + F Y HNVL+V++ + SC +S+P Sbjct: 4 HKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPA 63 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRV 490 A++TSG D + +K PG +F+CG+PGHC GQK+ ++V Sbjct: 64 ASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101
>STEL_RHUVE (P00302) Stellacyanin| Length = 107 Score = 105 bits (263), Expect = 7e-23 Identities = 43/101 (42%), Positives = 73/101 (72%), Gaps = 3/101 (2%) Frame = +2 Query: 197 YQVGGSSGWTI--LGNINYA-DWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNS 367 Y VG S+GW + G+++Y WA+ +TF +GDV+ FKY + HNV +V + +Y SC ++ Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDT 62 Query: 368 TPIATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRV 490 TPIA++ +G++++ +K+ G +++ICGVP HC GQK+++ V Sbjct: 63 TPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>BCP_PEA (Q41001) Blue copper protein precursor| Length = 189 Score = 99.4 bits (246), Expect = 6e-21 Identities = 45/98 (45%), Positives = 63/98 (64%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 Y VG +SGW I G+ Y+ WA+ +TF VGD + F Y G H V EV ++DY SCT+ I Sbjct: 27 YTVGDTSGWVIGGD--YSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSI 84 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRV 490 +T ++G + +K G +FICGVPGH G KL+++V Sbjct: 85 STDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like| protein) Length = 176 Score = 91.3 bits (225), Expect = 2e-18 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Frame = +2 Query: 203 VGGSSG-WTILGNINYA--DWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTP 373 VGG SG W I + +Y+ +WA K FKVGD I F+Y G +VLEV K YNSC + P Sbjct: 27 VGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNP 86 Query: 374 IATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVL 493 +A +T G+ KV + G +FI G GHC GQKL++ V+ Sbjct: 87 LANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI 126
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 87.8 bits (216), Expect = 2e-17 Identities = 42/104 (40%), Positives = 57/104 (54%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 + VGGS W NY W+ K F V D + F Y +G +VLEVNKADY++C PI Sbjct: 31 FNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPI 90 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVLKTQKP 508 GD ++++ G +FI G +C GQKLNV V+ + P Sbjct: 91 KRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIP 134
>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)| Length = 126 Score = 87.0 bits (214), Expect = 3e-17 Identities = 43/96 (44%), Positives = 54/96 (56%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 Y VG GWT + W A +TF+ GDV+ FKY +HNV+ V Y SCT S Sbjct: 33 YTVGDGGGWTF----GTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGS 88 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNV 484 SGDD++T+ S G +FIC VPGHC G K+ V Sbjct: 89 RVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAV 123
>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue| copper-binding protein II) (BCB II) (Phytocyanin 2) Length = 202 Score = 82.0 bits (201), Expect = 1e-15 Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 2/93 (2%) Frame = +2 Query: 221 WTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPIATHTSGDD 400 WT ++Y+ WA +TF+VGD++EFKY H V V+KA Y+ C S+ H+ GD Sbjct: 36 WTT--GVDYSGWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENHSDGDT 92 Query: 401 KVTIKSPGHRFFICGVPGHCA--AGQKLNVRVL 493 K+ +K+ G +FIC PGHC G KL V V+ Sbjct: 93 KIDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125
>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)| Length = 96 Score = 80.9 bits (198), Expect = 2e-15 Identities = 37/99 (37%), Positives = 54/99 (54%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 Y VGGS GWT N W + F+ GD++ F Y +HNV+ VN+ +++C Sbjct: 3 YVVGGSGGWTF----NTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGA 58 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVL 493 +TSG D++ + G +FIC PGHC +G K+ V L Sbjct: 59 KVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 96
>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)| Length = 129 Score = 78.2 bits (191), Expect = 1e-14 Identities = 38/96 (39%), Positives = 52/96 (54%) Frame = +2 Query: 197 YQVGGSSGWTILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPI 376 Y VG S WT N W + F+ GDV+ F Y +HNV++V+ YN+C T Sbjct: 36 YTVGDSGIWTF----NAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGA 91 Query: 377 ATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNV 484 +TSG D++T+ S G FFIC P HC + K+ V Sbjct: 92 KPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAV 126
>UMEC_ARMRU (P42849) Umecyanin (UMC)| Length = 115 Score = 77.4 bits (189), Expect = 2e-14 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Frame = +2 Query: 197 YQVGGSSGWTILGNIN-YADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTP 373 Y VGG W + Y WA +TF+VGD +EF + G+H+V V K +++C P Sbjct: 3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62 Query: 374 IATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVL 493 I+ T+ K+ + + G +++IC V HC GQKL++ V+ Sbjct: 63 ISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVV 102
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding| protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) Length = 196 Score = 75.1 bits (183), Expect = 1e-13 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Frame = +2 Query: 197 YQVGGSSGWTI-LGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTP 373 Y VG + WT + Y WA +TF+VGD +EF + G H+V V++A + +C P Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84 Query: 374 IATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVL 493 I+ T K+ + + G ++FIC V HC GQKL++ V+ Sbjct: 85 ISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124
>ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phytocyanin-like| protein) Length = 186 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = +2 Query: 206 GGSSGWTILGNINYA--DWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPIA 379 G +S W I + + + WA F+VGD + +KY + +VL+V K Y +C + P A Sbjct: 30 GKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAA 89 Query: 380 THTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVLKTQ 502 +++GD KV ++ G FFI G +C G+KL++ V+ ++ Sbjct: 90 NYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130
>CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin)| Length = 137 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 10/107 (9%) Frame = +2 Query: 203 VGGSSGWTILGNIN-YADWAAKQTFKVGDVIEFKYPQGIHNVLEV-NKADYNSCTNSTPI 376 VG ++GW++ + N Y+ WAA +TF+VGD ++F +P HNV E+ K +++C Sbjct: 7 VGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC------ 60 Query: 377 ATHTSGDDKVTIKSP--------GHRFFICGVPGHCAAGQKLNVRVL 493 + D+ V SP G +F+C V HC+ GQKL++ V+ Sbjct: 61 -NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVV 106
>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)| Length = 187 Score = 63.2 bits (152), Expect = 5e-10 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 4/109 (3%) Frame = +2 Query: 197 YQVGGSS-GWT--ILGNINYADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSC-TN 364 Y VGGS W + + + WA FK+GD + FKY + +V E N+ DY C T Sbjct: 29 YVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTV 88 Query: 365 STPIATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQKLNVRVLKTQKPR 511 G+ KV + PG R FI G HC G KL V V+ + K + Sbjct: 89 GKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVISSNKTK 137
>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)| Length = 180 Score = 58.2 bits (139), Expect = 2e-08 Identities = 32/82 (39%), Positives = 40/82 (48%) Frame = +2 Query: 245 YADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPIATHTSGDDKVTIKSPG 424 +A WA+ F VGD I F+Y +V EVN+ DY C + H G+ KV + G Sbjct: 46 FARWASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIG 105 Query: 425 HRFFICGVPGHCAAGQKLNVRV 490 FI G HC G KL V V Sbjct: 106 VYHFISGTKRHCKMGLKLAVVV 127
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 55.1 bits (131), Expect = 1e-07 Identities = 30/80 (37%), Positives = 38/80 (47%) Frame = +2 Query: 254 WAAKQTFKVGDVIEFKYPQGIHNVLEVNKADYNSCTNSTPIATHTSGDDKVTIKSPGHRF 433 WA+ F VGD I F+Y +V EV + DY+ C H G+ V +K G Sbjct: 49 WASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHH 108 Query: 434 FICGVPGHCAAGQKLNVRVL 493 FI G HC G KL V V+ Sbjct: 109 FISGKKRHCRLGLKLAVVVM 128
>MPAA3_AMBEL (P00304) Pollen allergen Amb a 3 (Amb a III) (Allergen Ra3)| Length = 101 Score = 53.5 bits (127), Expect = 4e-07 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%) Frame = +2 Query: 197 YQVGGSS--GWTILGNIN-YADWAAKQTFKVGDVIEFKYPQGIHNVLEVNKAD-YNSCTN 364 Y VGG GW + + YA W+A+Q FK DV+ F + G +V EV + + Y++C Sbjct: 4 YLVGGPELGGWKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDI 63 Query: 365 STPIATHTSGDDKVTIKSPGHRF-------FICGVPG 454 PI G D+ T+ +PG F F+ VPG Sbjct: 64 KDPIRLEPGGPDRFTLLTPGSHFICTKDQKFVACVPG 100
>NO551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment)| Length = 137 Score = 43.1 bits (100), Expect = 5e-04 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +2 Query: 299 KYPQGIHNVLEVNKADYNSC-TNSTPIATHTSGDDKVTIKSPGHRFFICGVPGHCAAGQK 475 KY + +V EVN+ DY C T G+ KV + G R FI G HC G K Sbjct: 1 KYDERTESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLK 60 Query: 476 LNVRVL 493 L V V+ Sbjct: 61 LMVVVM 66
>UXUA_BRUSU (Q8FVM2) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 401 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -2 Query: 225 VHPEEPPTW*TAADEVAAMPASASAITTAIPLMPFISPSHTLCFCS 88 +HP++PP +A+ A +AI A+P + S+ +CFC+ Sbjct: 238 LHPDDPPRSLFGLPRIASTEADYAAIFAAVP-----AQSNGMCFCT 278
>UXUA_BRUME (Q8YCQ4) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 401 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -2 Query: 225 VHPEEPPTW*TAADEVAAMPASASAITTAIPLMPFISPSHTLCFCS 88 +HP++PP +A+ A +AI A+P + S+ +CFC+ Sbjct: 238 LHPDDPPRSLFGLPRIASTEADYAAIFAAVP-----AQSNGMCFCT 278
>PODXL_HUMAN (O00592) Podocalyxin-like protein 1 precursor| Length = 528 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/67 (31%), Positives = 30/67 (44%) Frame = -2 Query: 234 PRMVHPEEPPTW*TAADEVAAMPASASAITTAIPLMPFISPSHTLCFCSCERRGRCQEQS 55 P + HP PT ++ M S+S+ T AIP F SP T S R Q+ S Sbjct: 194 PTLTHPVATPT---SSGHDHLMKISSSSSTVAIPGYTFTSPGMTTTLPSSVISQRTQQTS 250 Query: 54 TRNECSA 34 ++ S+ Sbjct: 251 SQMPASS 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,179,676 Number of Sequences: 219361 Number of extensions: 1064894 Number of successful extensions: 3487 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3390 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3480 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
