>WBP2_MOUSE (P97765) WW domain-binding protein 2 (WBP-2)|
          Length = 261

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
 Frame = +1

Query: 235 MAENPQLFGNGMPVPFHGEMFVLARDGVEFYVDKIPSAPGGHAKTK-GTIYLSNIRMVFV 411
           MA N      G  +  + E  +++ D VE   + + + P     TK GT+YL+  R++F+
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFL 60

Query: 412 AAKPIGNFFASDMPLLYVHGEKFNQPIFHCNNISGFVE 525
            +K      +  MP   +   +  QP+F  N I G V+
Sbjct: 61  -SKGKDAMQSFMMPFYLMKDCEIKQPVFGANFIKGIVK 97

>WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)|
          Length = 261

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
 Frame = +1

Query: 235 MAENPQLFGNGMPVPFHGEMFVLARDGVEFYVDKIPSAPGGHAKTK-GTIYLSNIRMVFV 411
           MA N      G  +  + E  +++ D VE   + + + P     TK GT+YL+  R++F+
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFL 60

Query: 412 AAKPIGNFFASDMPLLYVHGEKFNQPIFHCNNISGFVE 525
            +K      +  MP   +   +  QP+F  N I G V+
Sbjct: 61  -SKGKDAMQSFMMPFYLMKDCEIKQPVFGANYIKGTVK 97

>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)|
          Length = 262

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
 Frame = +1

Query: 235 MAENPQLFGNGMPVPFHGEMFVLARDGVEFYVDKIPSAPGGHAKTK-GTIYLSNIRMVFV 411
           MA N      G  +  + E  +++ D VE   + + + P     TK GT+YL+  R++F+
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFL 60

Query: 412 AAKPIGNFFASDMPLLYVHGEKFNQPIFHCNNISGFVE 525
            +K      +  MP   +   +  QP+F  N I G V+
Sbjct: 61  -SKGKDAMRSFMMPFYLMKDCEVKQPVFGANFIKGTVK 97

>GATA_CHLTE (Q8KFQ4) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
 Frame = -3

Query: 381 YGALCFCVTAGRRG------DLVDVELDAVAGEDEHLAVEGHGHPVPEQLRVLRHLS--G 226
           YG + F  +  + G      D   + L  +AG+DEH A   H H VPE    + H+S  G
Sbjct: 198 YGLVAFASSFDQIGLLAANCDDAALVLGVIAGKDEHDATSSH-HDVPEYDTAMDHVSVDG 256

Query: 225 LRI 217
           LRI
Sbjct: 257 LRI 259

>DNE21_RHIME (Q92LA6) Error-prone DNA polymerase 1 (EC 2.7.7.7)|
          Length = 1116

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = -3

Query: 402 HPYVRKVYGALCFCVTAG----RRGDLVDVELDAVAGEDEHLAV--EGHGHPVPEQLRVL 241
           +P  R+ +G LC  ++AG    ++GD      D +  ++E L +  +G G P PE L VL
Sbjct: 83  YPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLLIVMQGEGRPEPESLEVL 142

>SWS_DROME (Q9U969) Protein Swiss cheese|
          Length = 1425

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 313 GVEFYVDKIPSAPGGHAKTKGTIYLSNIRMVFVAAKPIGNFFASDMPLLYVHGEKFNQPI 492
           GV   V + PS+P  H++ + T+   N         P G+F  +      VHG+  N  +
Sbjct: 373 GVSVTVTRPPSSPSRHSREEHTLSDPN-------PNPDGSFHGTTNLFTEVHGDAPNADL 425

Query: 493 FH 498
           FH
Sbjct: 426 FH 427

>TUS_KLEPO (O52715) DNA replication terminus site-binding protein (Ter-binding|
           protein)
          Length = 310

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -3

Query: 378 GALCFCVTAGRRGDLVD--VELDAVAGEDEHLAVEGHGHPVPEQLR-VLRHLSGLRILSA 208
           GA+C  VTA  + DL+     ++A+    E +     G P   +   V RHL GL  LSA
Sbjct: 96  GAICLQVTAAEQQDLLARIQHINALKATFEKIVTVDSGLPPTARFEWVHRHLPGLITLSA 155

Query: 207 RLLLEP 190
              L P
Sbjct: 156 YRTLTP 161

>ANNU_SCHAM (P52183) Annulin (Protein-glutamine gamma-glutamyltransferase) (EC|
           2.3.2.13) (Transglutaminase)
          Length = 772

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 7   TKQPDRFEKPSLASLPRHPDPGLLPGIG 90
           T++PD   KP  A +P  P PG +P  G
Sbjct: 32  TRRPDSLPKPPAAVVPSPPSPGDVPDAG 59

>CSN12_ASPFU (Q4WJX0) COP9 signalosome complex subunit 12|
          Length = 455

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 399 PYVRKVYGALCFCVTAGRRGDLVDVELDAVAGEDE 295
           P + K++  LC C+   R+GDLV  +    AGE+E
Sbjct: 314 PRLEKLFRPLCDCI---RKGDLVGFDTAMFAGEEE 345

>TMPS4_MOUSE (Q8VCA5) Transmembrane protease, serine 4 (EC 3.4.21.-)|
           (Channel-activating protease 2) (mCAP2)
          Length = 435

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 348 RRGDLVDVELDAVAGEDEHLAVEGHGHPVPEQLRVLRHLSGLRILSA 208
           +RG L D  LD  +GEDE   V+         +R+ +  S L++L A
Sbjct: 70  QRGQLCDGHLDCASGEDEEHCVKDFPEKPGVAVRLSKDRSTLQVLDA 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,226,075
Number of Sequences: 219361
Number of extensions: 1255673
Number of successful extensions: 3732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3730
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)