Clone Name | bart41g10 |
---|---|
Clone Library Name | barley_pub |
>BSL1_ARATH (Q8L7U5) Serine/threonine-protein phosphatase BSL1 (EC 3.1.3.16)| (BSU1-like protein 1) Length = 881 Score = 35.8 bits (81), Expect = 0.071 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = +1 Query: 319 YGVAVYNVTTGEWHRESSAPPVPMFAQCAA-VGTRLAVMGGW--DPKTFEPVADVNVLDA 489 YG+ ++ EW P P + A VG RL V GG + + A V VLD Sbjct: 235 YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDT 294 Query: 490 ATGVW 504 A GVW Sbjct: 295 AAGVW 299
>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +1 Query: 334 YNVTTGEWHRESSAPPVPMFAQCAAVGTRLAVMGGWDPKTFEPVADVNVLDAATGVW 504 Y+ T WH +S AAVG RL +GG+D + +A V D T W Sbjct: 360 YDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTS--DLATVESYDPVTNTW 414
>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)| Length = 640 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +1 Query: 334 YNVTTGEWHRESSAPPVPMFAQCAAVGTRLAVMGGWDPKTFEPVADVNVLDAATGVW 504 Y+ T WH +S AAVG RL +GG+D + +A V D T W Sbjct: 360 YDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTS--DLATVESYDPVTNTW 414
>KLH17_HUMAN (Q6TDP4) Kelch-like protein 17 (Actinfilin)| Length = 642 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +1 Query: 334 YNVTTGEWHRESSAPPVPMFAQCAAVGTRLAVMGGWDPKTFEPVADVNVLDAATGVW 504 Y+ T WH +S AAVG RL +GG+D + +A V D T W Sbjct: 362 YDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTS--DLATVESYDPVTNTW 416
>DACT1_HUMAN (Q9NYF0) Dapper homolog 1 (hDPR1) (Heptacellular carcinoma novel| gene 3 protein) Length = 836 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -1 Query: 152 DPCGTRARQSTATSSGIPGMRSTWSASHPWT--RLFGFIIA 36 D CG + T S +P S WSASHP + ++ G+I++ Sbjct: 304 DICGGSELDAVKTDSSLPSPSSLWSASHPSSSKKMDGYILS 344
>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 478 Score = 31.6 bits (70), Expect = 1.3 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 446 PRPSSPWRTSTCWTPPPASGTAA 514 P +PW T++ TPPP++GTAA Sbjct: 392 PGTKAPWATASQSTPPPSTGTAA 414
>AFR_ARATH (Q8LAW2) Protein AFR (Protein ATTENUATED FAR-RED RESPONSE)| Length = 372 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 91 LIPGMPDDVAVDCLARVPHGSYRSMRRVCRGW 186 LI G+P+D+A CL R+P+ + R V W Sbjct: 28 LISGLPNDIAELCLLRLPYPYHALYRSVSSSW 59
>CHS1_EXODE (P30600) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1) Length = 988 Score = 30.4 bits (67), Expect = 3.0 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 449 RPSSPWRTSTCWTPPPASGTA 511 RPS+P R ST WT PPA A Sbjct: 58 RPSTPSRVSTDWTRPPAPSVA 78
>BSL2_ARATH (Q9SJF0) Serine/threonine-protein phosphatase BSL2 (EC 3.1.3.16)| (BSU1-like protein 2) Length = 1088 Score = 30.4 bits (67), Expect = 3.0 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +1 Query: 319 YGVAVYNVTTGEWHRESSAPPVPMFAQCAA-VGTRLAVMGG--WDPKTFEPVADVNVLDA 489 YG+A + EW P + A V RL V GG + E + V VLD Sbjct: 316 YGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 375 Query: 490 ATGVW 504 A GVW Sbjct: 376 AAGVW 380
>KLD7B_HUMAN (Q96G42) Kelch domain-containing protein 7B| Length = 495 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = +1 Query: 322 GVAV--YNVTTGEWHRESSAP-PVPMFAQCAAVGTRLAVMGGWDPKTF 456 G AV YN TG W R +S P P P C +G + + TF Sbjct: 406 GAAVMRYNTVTGSWSRAASLPLPAPAPLHCTTLGNTIYCLNPQVTATF 453
>RECF_SYNJB (Q2JIB8) DNA replication and repair protein recF| Length = 380 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 461 GSKVLGSQPPITARRVPTAAHWANIGTGGAE-LSRCHSPVVTL 336 GS+++ + + R P AAHW + +GG E L+ + P V L Sbjct: 190 GSRIMRRRARLLQRLEPLAAHWHRVISGGRETLTLTYRPQVPL 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,059,486 Number of Sequences: 219361 Number of extensions: 582857 Number of successful extensions: 2389 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2389 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)