Clone Name | bart41g09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_193188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 529 bits (267), Expect = e-147 Identities = 432/487 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||||| | |||||||||||||||| || ||||| |||||||||||||||||||| || Sbjct: 135 gttccacatggtccagatccagcgcgacgacacgacttttgatgcctatgttgttggaaa 194 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 ||| || ||||||||| |||| || |||||||||||||||| |||||||||||| |||| Sbjct: 195 agagaatgctcctggaattgttgttttgcaagagtggtggggggttgactatgagatcaa 254 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||||||||| |||| |||||||| || || || |||||||| || || ||||||||||| Sbjct: 255 gaatcatgctgtccacatttcccaaattggtgaaggatacagagctctcattccagattt 314 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 ||| ||||| ||||||||| | || ||||| || || || |||||||||||||| ||||| Sbjct: 315 gtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtctaga 374 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 |||||| ||||| |||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 375 ctggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatggatc 434 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 435 acccaaggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagt 494 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 || ||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| Sbjct: 495 ttcagtcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgc 554 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 555 cgatgcttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgt 614 Query: 591 tggattt 597 ||||||| Sbjct: 615 tggattt 621
>dbj|AK106208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G04, full insert sequence Length = 1086 Score = 529 bits (267), Expect = e-147 Identities = 432/487 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||||| | |||||||||||||||| || ||||| |||||||||||||||||||| || Sbjct: 178 gttccacatggtccagatccagcgcgacgacacgacttttgatgcctatgttgttggaaa 237 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 ||| || ||||||||| |||| || |||||||||||||||| |||||||||||| |||| Sbjct: 238 agagaatgctcctggaattgttgttttgcaagagtggtggggggttgactatgagatcaa 297 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||||||||| |||| |||||||| || || || |||||||| || || ||||||||||| Sbjct: 298 gaatcatgctgtccacatttcccaaattggtgaaggatacagagctctcattccagattt 357 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 ||| ||||| ||||||||| | || ||||| || || || |||||||||||||| ||||| Sbjct: 358 gtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtctaga 417 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 |||||| ||||| |||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 418 ctggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatggatc 477 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 478 acccaaggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagt 537 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 || ||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| Sbjct: 538 ttcagtcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgc 597 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 598 cgatgcttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgt 657 Query: 591 tggattt 597 ||||||| Sbjct: 658 tggattt 664
>dbj|AK104379.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G12, full insert sequence Length = 1010 Score = 529 bits (267), Expect = e-147 Identities = 432/487 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||||| | |||||||||||||||| || ||||| |||||||||||||||||||| || Sbjct: 122 gttccacatggtccagatccagcgcgacgacacgacttttgatgcctatgttgttggaaa 181 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 ||| || ||||||||| |||| || |||||||||||||||| |||||||||||| |||| Sbjct: 182 agagaatgctcctggaattgttgttttgcaagagtggtggggggttgactatgagatcaa 241 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||||||||| |||| |||||||| || || || |||||||| || || ||||||||||| Sbjct: 242 gaatcatgctgtccacatttcccaaattggtgaaggatacagagctctcattccagattt 301 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 ||| ||||| ||||||||| | || ||||| || || || |||||||||||||| ||||| Sbjct: 302 gtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtctaga 361 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 |||||| ||||| |||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 362 ctggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatggatc 421 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 422 acccaaggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagt 481 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 || ||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| Sbjct: 482 ttcagtcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgc 541 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 542 cgatgcttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgt 601 Query: 591 tggattt 597 ||||||| Sbjct: 602 tggattt 608
>dbj|AK059992.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C04, full insert sequence Length = 1014 Score = 529 bits (267), Expect = e-147 Identities = 432/487 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||||| | |||||||||||||||| || ||||| |||||||||||||||||||| || Sbjct: 124 gttccacatggtccagatccagcgcgacgacacgacttttgatgcctatgttgttggaaa 183 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 ||| || ||||||||| |||| || |||||||||||||||| |||||||||||| |||| Sbjct: 184 agagaatgctcctggaattgttgttttgcaagagtggtggggggttgactatgagatcaa 243 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||||||||| |||| |||||||| || || || |||||||| || || ||||||||||| Sbjct: 244 gaatcatgctgtccacatttcccaaattggtgaaggatacagagctctcattccagattt 303 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 ||| ||||| ||||||||| | || ||||| || || || |||||||||||||| ||||| Sbjct: 304 gtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtctaga 363 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 |||||| ||||| |||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 364 ctggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatggatc 423 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 424 acccaaggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagt 483 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 || ||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| Sbjct: 484 ttcagtcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgc 543 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 544 cgatgcttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgt 603 Query: 591 tggattt 597 ||||||| Sbjct: 604 tggattt 610
>gb|BT016534.1| Zea mays clone Contig367 mRNA sequence Length = 1037 Score = 505 bits (255), Expect = e-140 Identities = 426/483 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||| ||||||||||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 160 gttccagaagatccagatccagcgcgaggacaccacttttgatgcttatgttgttggcaa 219 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 |||||| ||||||||| |||| || |||||||||||||||| |||||||||||| | || Sbjct: 220 agaaaatgctcctggaattgtggttttgcaagagtggtggggagttgactatgagataaa 279 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||| ||||| ||||| |||||||| | || | |||||||| || || ||||||||||| Sbjct: 280 gaaccatgcgatccacatttcccaacttggtggaggatacagagcactcattccagattt 339 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 |||||||| || |||||| | || || ||||||||||||||||||||||| || || || Sbjct: 340 ataccgtggaaaagttgctctcgatgttgctgaggcacaacatctgatggagggtctcga 399 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 ||||| |||||| |||||||||| ||||| |||||||| ||||||||| ||||||||| Sbjct: 400 ctggcagggtgcagtcaaggatatccaggcttcagttaaatggctgaagtcaaatggatc 459 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 460 acccaaggttggtgttactggctattgcatgggaggtgctttatcaattgcaagtggagt 519 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 ||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 520 tttagtcccagaggttgatgctgttgttgctttctatgggacaccatcttctgagcttgc 579 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 |||| |||| |||||| ||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 580 tgatccttctaaggctaaggctcctatacaggctcatttcggggagcatgacagttttgt 639 Query: 591 tgg 593 ||| Sbjct: 640 tgg 642
>gb|AY104907.1| Zea mays PCO117250 mRNA sequence Length = 1130 Score = 505 bits (255), Expect = e-140 Identities = 426/483 (88%) Strand = Plus / Plus Query: 111 gttccacaagatccagatccagcgcgaggatacgacctttgatgcctatgttgttggcaa 170 |||||| ||||||||||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 173 gttccagaagatccagatccagcgcgaggacaccacttttgatgcttatgttgttggcaa 232 Query: 171 agaaaacgctcctggagttgtagtgctgcaagagtggtggggcgttgactatgaggtcaa 230 |||||| ||||||||| |||| || |||||||||||||||| |||||||||||| | || Sbjct: 233 agaaaatgctcctggaattgtggttttgcaagagtggtggggagttgactatgagataaa 292 Query: 231 gaatcatgccatccatatttcccagatcggcgatggatacagggcgcttattccagattt 290 ||| ||||| ||||| |||||||| | || | |||||||| || || ||||||||||| Sbjct: 293 gaaccatgcgatccacatttcccaacttggtggaggatacagagcactcattccagattt 352 Query: 291 gtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggactaga 350 |||||||| || |||||| | || || ||||||||||||||||||||||| || || || Sbjct: 353 ataccgtggaaaagttgctctcgatgttgctgaggcacaacatctgatggagggtctcga 412 Query: 351 ctggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatggatc 410 ||||| |||||| |||||||||| ||||| |||||||| ||||||||| ||||||||| Sbjct: 413 ctggcagggtgcagtcaaggatatccaggcttcagttaaatggctgaagtcaaatggatc 472 Query: 411 acccaaggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagt 470 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 473 acccaaggttggtgttactggctattgcatgggaggtgctttatcaattgcaagtggagt 532 Query: 471 tttggtcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgc 530 ||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 533 tttagtcccagaggttgatgctgttgttgctttctatgggacaccatcttctgagcttgc 592 Query: 531 tgatacttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgt 590 |||| |||| |||||| ||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 593 tgatccttctaaggctaaggctcctatacaggctcatttcggggagcatgacagttttgt 652 Query: 591 tgg 593 ||| Sbjct: 653 tgg 655
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 250 bits (126), Expect = 5e-63 Identities = 168/182 (92%) Strand = Plus / Plus Query: 416 aggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagttttgg 475 |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| | Sbjct: 19135121 aggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagtttcag 19135180 Query: 476 tcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgctgata 535 |||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| ||| Sbjct: 19135181 tcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgccgatg 19135240 Query: 536 cttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgttggat 595 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19135241 cttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgttggat 19135300 Query: 596 tt 597 || Sbjct: 19135301 tt 19135302 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 288 tttgtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggact 347 |||||| ||||| ||||||||| | || ||||| || || || |||||||||||||| || Sbjct: 19134256 tttgtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtct 19134315 Query: 348 agactggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatgg 407 ||||||||| ||||| |||||||||||||||| |||||||| ||||| |||| |||||| Sbjct: 19134316 agactggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatgg 19134375 Query: 408 atcacccaaggt 419 |||||||||||| Sbjct: 19134376 atcacccaaggt 19134387 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||||||||| ||||| || ||||||||| |||| || ||||||||||| Sbjct: 19133486 tttgatgcctatgttgttggaaaagagaatgctcctggaattgttgttttgcaagagtgg 19133545 Query: 208 tggggcgttgactatgaggtcaagaatcatgccatccatatttcccagatcggcgatgga 267 ||||| |||||||||||| ||||||||||||| |||| |||||||| || || || ||| Sbjct: 19133546 tggggggttgactatgagatcaagaatcatgctgtccacatttcccaaattggtgaagga 19133605 Query: 268 tacagggcgcttattccaga 287 ||||| || || |||||||| Sbjct: 19133606 tacagagctctcattccaga 19133625
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 250 bits (126), Expect = 5e-63 Identities = 168/182 (92%) Strand = Plus / Plus Query: 416 aggttggtgttactggttattgcatgggaggtgctttggcaattgcaagtggagttttgg 475 |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| | Sbjct: 100538 aggttggtgttactggatattgcatgggaggcgctttgtcaattgcaagtggagtttcag 100597 Query: 476 tcccggaggttgatgctgttgttgctttctatgggacgccatcttcggagcttgctgata 535 |||| ||||||||||||||||| |||||||||||||| ||| |||| |||||||| ||| Sbjct: 100598 tcccagaggttgatgctgttgtggctttctatgggacaccaccttctgagcttgccgatg 100657 Query: 536 cttccaaggctcaggctccaatccaggctcattttggggagcttgacagttttgttggat 595 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 100658 cttccaaggcccaggctcccatccaggctcattttggggagcttgacagttttgttggat 100717 Query: 596 tt 597 || Sbjct: 100718 tt 100719 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 288 tttgtaccgtgggaaggttgctttggaggtagctgaggcacaacatctgatggaaggact 347 |||||| ||||| ||||||||| | || ||||| || || || |||||||||||||| || Sbjct: 99673 tttgtatcgtggtaaggttgctcttgatgtagcggaagctcagcatctgatggaaggtct 99732 Query: 348 agactggccaggtgcaatcaaggatattcaggcctcagttaagtggctgaaggaaaatgg 407 ||||||||| ||||| |||||||||||||||| |||||||| ||||| |||| |||||| Sbjct: 99733 agactggccgggtgcggtcaaggatattcaggcttcagttaaatggctcaaggcaaatgg 99792 Query: 408 atcacccaaggt 419 |||||||||||| Sbjct: 99793 atcacccaaggt 99804 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||||||||| ||||| || ||||||||| |||| || ||||||||||| Sbjct: 98903 tttgatgcctatgttgttggaaaagagaatgctcctggaattgttgttttgcaagagtgg 98962 Query: 208 tggggcgttgactatgaggtcaagaatcatgccatccatatttcccagatcggcgatgga 267 ||||| |||||||||||| ||||||||||||| |||| |||||||| || || || ||| Sbjct: 98963 tggggggttgactatgagatcaagaatcatgctgtccacatttcccaaattggtgaagga 99022 Query: 268 tacagggcgcttattccaga 287 ||||| || || |||||||| Sbjct: 99023 tacagagctctcattccaga 99042
>gb|BT014493.1| Lycopersicon esculentum clone 133862R, mRNA sequence Length = 1164 Score = 109 bits (55), Expect = 1e-20 Identities = 175/215 (81%) Strand = Plus / Plus Query: 277 cttattccagatttgtaccgtgggaaggttgctttggaggtagctgaggcacaacatctg 336 ||||| || |||||||| ||||| || |||| || || ||||| || |||||||||||| Sbjct: 311 cttatccctgatttgtatcgtggaaaagttggcttagatgtagcagaagcacaacatctg 370 Query: 337 atggaaggactagactggccaggtgcaatcaaggatattcaggcctcagttaagtggctg 396 ||||| || || ||||||| ||| || |||| ||||||||||| |||||||| ||||| Sbjct: 371 atggatggtcttgactggcaaggggctgtcaaagatattcaggcttcagttaattggcta 430 Query: 397 aaggaaaatggatcacccaaggttggtgttactggttattgcatgggaggtgctttggca 456 ||| ||||||||| |||||||| |||||||| || |||||||| |||||| | || Sbjct: 431 aagtcaaatggatccaaaaaggttggagttactggatactgcatgggtggtgctcttgcg 490 Query: 457 attgcaagtggagttttggtcccggaggttgatgc 491 ||||||||| ||||||||||| |||||| |||| Sbjct: 491 attgcaagttctgttttggtcccagaggttaatgc 525 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 139 gatacgacctttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctg 198 ||||| || |||||||||||||| |||| ||||| | || |||||| |||| ||||| Sbjct: 173 gatactacatttgatgcctatgtaattggaaaagacgatgcccctggaattgttgtgctt 232 Query: 199 caagagtggtggggcgttga 218 || ||||||||||| ||||| Sbjct: 233 caggagtggtggggtgttga 252
>dbj|AP006139.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT02A16, TM0243, complete sequence Length = 86350 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||| |||||||||||||| | | ||||||||| |||| ||||| || |||||| Sbjct: 5073 tttgatgcatatgttgttggcaagcacgatgctcctggaattgttgtgcttcaggagtgg 5132 Query: 208 tgggg 212 ||||| Sbjct: 5133 tgggg 5137 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||| |||||||||||||| | | ||||||||| || | ||||| || |||||| Sbjct: 674 tttgatgcatatgttgttggcaagcacgatgctcctggaatttttgtgcttcaggagtgg 615 Query: 208 tggggcgttgactatgaggtcaagaatcatgc 239 ||||| || || ||||| |||| |||||||| Sbjct: 614 tggggtgtggattatgaaatcaaaaatcatgc 583
>ref|NM_128811.2| Arabidopsis thaliana hydrolase AT2G32520 mRNA, complete cds Length = 1118 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||| || || ||||| | || ||||| |||| ||| | ||||| ||| Sbjct: 146 tttgatgcctatgtggtcggtaaagatgatgcgcctgggattgtggtgattcaagaatgg 205 Query: 208 tggggcgttgactatgaggtcaagaatcatgc 239 ||||| ||||||| |||| ||||||| ||||| Sbjct: 206 tggggtgttgactttgagatcaagaaccatgc 237 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 322 gaggcacaacatctgatggaaggactagactggccaggtgcaatcaaggatat 374 |||||||| ||||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 320 gaggcacagcatctaatggatggccttgattggccaggtgctatcaaagatat 372 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 559 caggctcattttggggagcttgacagttttgt 590 |||||||||||||| ||||| |||| |||||| Sbjct: 557 caggctcattttggagagctcgacaattttgt 588
>gb|AC161285.2| Pan troglodytes BAC clone CH251-310B11 from chromosome 7, complete sequence Length = 171038 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttctat 507 |||||||||||||||||||||||| Sbjct: 96448 gttgatgctgttgttgctttctat 96471
>gb|AC002458.1| Homo sapiens BAC clone CTB-98M4 from 7, complete sequence Length = 82032 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttctat 507 |||||||||||||||||||||||| Sbjct: 44939 gttgatgctgttgttgctttctat 44916
>gb|AC142302.1| Pan troglodytes BAC clone RP43-128I16 from 7, complete sequence Length = 161986 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttctat 507 |||||||||||||||||||||||| Sbjct: 52072 gttgatgctgttgttgctttctat 52049
>gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 map TEn5, complete sequence Length = 78732 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||| || || ||||| | || ||||| |||| ||| | ||||| ||| Sbjct: 27097 tttgatgcctatgtggtcggtaaagatgatgcgcctgggattgtggtgattcaagaatgg 27038 Query: 208 tggggcgttgactatgaggtcaagaatcatgc 239 ||||| ||||||| |||| ||||||| ||||| Sbjct: 27037 tggggtgttgactttgagatcaagaaccatgc 27006 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 322 gaggcacaacatctgatggaaggactagactggccaggtgcaatcaaggatat 374 |||||||| ||||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 26842 gaggcacagcatctaatggatggccttgattggccaggtgctatcaaagatat 26790 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 559 caggctcattttggggagcttgacagttttgt 590 |||||||||||||| ||||| |||| |||||| Sbjct: 26525 caggctcattttggagagctcgacaattttgt 26494
>gb|BT006416.1| Arabidopsis thaliana At2g32520 gene, complete cds Length = 720 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||| || || ||||| | || ||||| |||| ||| | ||||| ||| Sbjct: 52 tttgatgcctatgtggtcggtaaagatgatgcgcctgggattgtggtgattcaagaatgg 111 Query: 208 tggggcgttgactatgaggtcaagaatcatgc 239 ||||| ||||||| |||| ||||||| ||||| Sbjct: 112 tggggtgttgactttgagatcaagaaccatgc 143 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 322 gaggcacaacatctgatggaaggactagactggccaggtgcaatcaaggatat 374 |||||||| ||||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 226 gaggcacagcatctaatggatggccttgattggccaggtgctatcaaagatat 278 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 559 caggctcattttggggagcttgacagttttgt 590 |||||||||||||| ||||| |||| |||||| Sbjct: 463 caggctcattttggagagctcgacaattttgt 494
>gb|AY086081.1| Arabidopsis thaliana clone 2114 mRNA, complete sequence Length = 931 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 148 tttgatgcctatgttgttggcaaagaaaacgctcctggagttgtagtgctgcaagagtgg 207 |||||||||||||| || || ||||| | || ||||| |||| ||| | ||||| ||| Sbjct: 94 tttgatgcctatgtggtcggtaaagatgatgcgcctgggattgtggtgattcaagaatgg 153 Query: 208 tggggcgttgactatgaggtcaagaatcatgc 239 ||||| ||||||| |||| ||||||| ||||| Sbjct: 154 tggggtgttgactttgagatcaagaaccatgc 185 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 559 caggctcattttggggagcttgacagttttgttgg 593 |||||||||||||| ||||| |||| ||||||||| Sbjct: 505 caggctcattttggagagctcgacaattttgttgg 539 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 322 gaggcacaacatctgatggaaggactagactggccaggtgcaatcaaggatat 374 |||||||| ||||| ||||| || || || ||||||||||| ||||| ||||| Sbjct: 268 gaggcacagcatctaatggatggccttgattggccaggtgctatcaaagatat 320
>emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chromosome 6, complete sequence Length = 114653 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 483 ggttgatgctgttgttgctttct 505 ||||||||||||||||||||||| Sbjct: 33148 ggttgatgctgttgttgctttct 33126
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cgccccctccgccgctcgcccc 55 |||||||||||||||||||||| Sbjct: 169672 cgccccctccgccgctcgcccc 169651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ccccctccgccgctcgcccc 55 |||||||||||||||||||| Sbjct: 169707 ccccctccgccgctcgcccc 169688
>emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 58857 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 14387 gttgatgctgttgttgctttct 14366
>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a mitochondrial intermediate peptidase (MIPEP) pseudogene and a CpG island, complete sequence Length = 198794 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 173698 gttgatgctgttgttgctttct 173719
>emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on chromosome 6 Contains an activating transcription factor 1 (ATF1) pseudogene, complete sequence Length = 194264 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 18066 gttgatgctgttgttgctttct 18045
>emb|AL139399.10| Human DNA sequence from clone RP11-574A21 on chromosome Xq21.33-22.3, complete sequence Length = 71169 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 56945 gttgatgctgttgttgctttct 56924
>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2, complete sequence Length = 140757 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 133818 gttgatgctgttgttgctttct 133797
>emb|AL121592.14|HSJ765D23 Human DNA sequence from clone RP4-765D23 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 30996 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 26374 gttgatgctgttgttgctttct 26353
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 62152 gttgatgctgttgttgctttct 62173
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 27185 gttgatgctgttgttgctttct 27164
>gb|AC116362.3| Homo sapiens chromosome 5 clone RP11-756H20, complete sequence Length = 178530 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 160665 gttgatgctgttgttgctttct 160644
>gb|AC094102.3| Homo sapiens chromosome 5 clone RP11-409A17, complete sequence Length = 118985 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 35257 gttgatgctgttgttgctttct 35278
>gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, complete sequence Length = 192704 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 62619 gttgatgctgttgttgctttct 62598
>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence Length = 174372 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 142877 gttgatgctgttgttgctttct 142856
>gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complete sequence Length = 193632 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 21662 gttgatgctgttgttgctttct 21683
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 115182 gttgatgctgttgttgctttct 115161
>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence Length = 161391 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 37688 gttgatgctgttgttgctttct 37709
>gb|AC097710.2| Homo sapiens BAC clone RP11-44H17 from 4, complete sequence Length = 156848 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 147541 gttgatgctgttgttgctttct 147562
>gb|AC107078.4| Homo sapiens BAC clone RP11-582N16 from 2, complete sequence Length = 31946 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 17568 gttgatgctgttgttgctttct 17547
>gb|AC007785.1|AC007785 Homo sapiens chromosome 19, BAC 282485 (CIT-B-344H19), complete sequence Length = 166500 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 98652 gttgatgctgttgttgctttct 98673
>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 148521 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttct 505 |||||||||||||||||||||| Sbjct: 104051 gttgatgctgttgttgctttct 104030
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttctatgg 509 |||||||||||||| ||||||||||| Sbjct: 11344 gttgatgctgttgtagctttctatgg 11369
>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120, complete sequence Length = 137804 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgctttctatgg 509 |||||||||||||| ||||||||||| Sbjct: 3500 gttgatgctgttgtagctttctatgg 3475
>gb|AC137680.10| Mus musculus chromosome 13, clone RP23-454P19, complete sequence Length = 197663 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 aggttgatgctgttgttgctt 502 ||||||||||||||||||||| Sbjct: 43525 aggttgatgctgttgttgctt 43505
>gb|AC025277.10| Homo sapiens chromosome 16 clone CTD-3229J4, complete sequence Length = 189032 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gtagctgaggcacaacatctg 336 ||||||||||||||||||||| Sbjct: 31161 gtagctgaggcacaacatctg 31181
>emb|CR954250.6| Zebrafish DNA sequence from clone DKEY-34G4 in linkage group 8, complete sequence Length = 85279 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccccctccgccgctcgcccc 55 ||||||||||||||||||||| Sbjct: 85137 gccccctccgccgctcgcccc 85157
>gb|AC115299.4| Mus musculus BAC clone RP23-444O19 from 13, complete sequence Length = 201296 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 aggttgatgctgttgttgctt 502 ||||||||||||||||||||| Sbjct: 128805 aggttgatgctgttgttgctt 128785
>emb|AL353664.14| Human DNA sequence from clone RP11-140B17 on chromosome 10, complete sequence Length = 79943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggttgatgctgttgttgcttt 503 ||||||||||||||||||||| Sbjct: 31238 ggttgatgctgttgttgcttt 31258
>emb|AL137787.11| Human DNA sequence from clone RP5-1070B1 on chromosome Xq22.1-23 Contains the 3' end of a novel gene, a novel gene (KIAA1817) and the 5' end of the PRPS1 for phosphoribosyl pyrophosphate synthetase 1 (PRSI) gene, complete sequence Length = 89446 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 38929 ttgatgctgttgttgctttct 38949
>emb|AL137019.6| Human DNA sequence from clone RP11-143P10 on chromosome 9q31.3-33.1, complete sequence Length = 181542 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 ttgctttggaggtagctgaggcaca 329 |||||||||||| |||||||||||| Sbjct: 139464 ttgctttggaggaagctgaggcaca 139440
>emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in linkage group 8, complete sequence Length = 120875 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gccccctccgccgctcgcccc 55 ||||||||||||||||||||| Sbjct: 1858 gccccctccgccgctcgcccc 1878
>gb|AY442275.1| Aeromonas hydrophila clone F85AH1 putative glycyl-tRNA synthetase beta chain and predicted kinase genes, complete cds; and unknown gene Length = 3281 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ccagttccacaagatccagatccag 132 |||||||||| |||||||||||||| Sbjct: 25 ccagttccaccagatccagatccag 1
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 572 gggagcttgacagttttgttggatt 596 |||||||| |||||||||||||||| Sbjct: 17534 gggagcttcacagttttgttggatt 17558
>gb|AC091878.2| Homo sapiens chromosome 5 clone CTD-3065A13, complete sequence Length = 132444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 actagactggccaggtgcaat 365 ||||||||||||||||||||| Sbjct: 85999 actagactggccaggtgcaat 86019
>gb|AF212831.2|AF212831 Homo sapiens chromosome 21 clone BAC R-45M19 map 21q21, complete sequence Length = 159255 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 26833 ttgatgctgttgttgctttct 26813
>gb|AF130359.3|AF130359 Homo sapiens chromosome 21 clone PAC K15697 map 21q21, complete sequence Length = 146412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 118619 ttgatgctgttgttgctttct 118599
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ccctgcgccccctccgccgctcgcc 53 ||||||||| ||||||||||||||| Sbjct: 3554928 ccctgcgccgcctccgccgctcgcc 3554904 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ccctgcgccccctccgccgctcgcc 53 ||||||||| ||||||||||||||| Sbjct: 3549687 ccctgcgccacctccgccgctcgcc 3549663
>gb|AC121761.4| Homo sapiens 12 BAC RP11-585P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170917 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 20811 ttgatgctgttgttgctttct 20791
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ccctgcgccccctccgccgctcgcc 53 ||||||||| ||||||||||||||| Sbjct: 46765 ccctgcgccgcctccgccgctcgcc 46741 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ccctgcgccccctccgccgctcgcc 53 ||||||||| ||||||||||||||| Sbjct: 41524 ccctgcgccacctccgccgctcgcc 41500
>dbj|BS000031.1| Pan troglodytes chromosome 22 clone:PTB-082B23, map 22, complete sequences Length = 218696 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 28459 ttgatgctgttgttgctttct 28439
>emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013 Length = 340000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ttgatgctgttgttgctttct 505 ||||||||||||||||||||| Sbjct: 187496 ttgatgctgttgttgctttct 187476
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atggcctccgacgccgccagc 108 ||||||||||||||||||||| Sbjct: 3517839 atggcctccgacgccgccagc 3517819
>ref|XM_630296.1| Dictyostelium discoideum hypothetical protein (DDB0219642), partial mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 1222 gttgatgctgttgttgcttt 1203
>ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggcctccgacgccgccagcc 109 |||||||||||||||||||| Sbjct: 719 ggcctccgacgccgccagcc 738
>gb|AC005751.1| Homo sapiens chromosome 16, BAC clone 375G12 (LANL), complete sequence Length = 162822 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cctttgatgcctatgttgtt 165 |||||||||||||||||||| Sbjct: 113120 cctttgatgcctatgttgtt 113139
>gb|AC161129.3| Pan troglodytes BAC clone CH251-332I16 from chromosome 7, complete sequence Length = 172413 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 63787 gttgatgctgttgttgcttt 63768
>gb|AC161284.2| Pan troglodytes BAC clone CH251-341A21 from chromosome 7, complete sequence Length = 153042 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 150814 gttgatgctgttgttgcttt 150795
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tacgacctttgatgcctatg 160 |||||||||||||||||||| Sbjct: 112873 tacgacctttgatgcctatg 112854
>gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, complete sequence Length = 156840 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 31128 gttgatgctgttgttgcttt 31109
>ref|XM_756701.1| Ustilago maydis 521 hypothetical protein (UM05647.1) partial mRNA Length = 2406 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgccatcttcggagcttgct 531 |||||||||||||||||||| Sbjct: 238 cgccatcttcggagcttgct 219
>gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, complete sequence Length = 221640 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cctttgatgcctatgttgtt 165 |||||||||||||||||||| Sbjct: 139693 cctttgatgcctatgttgtt 139674
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tacgacctttgatgcctatg 160 |||||||||||||||||||| Sbjct: 201737 tacgacctttgatgcctatg 201756
>emb|CR701475.2|CNS0G47J Tetraodon nigroviridis full-length cDNA Length = 1149 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tggcctccgacgccgccagc 108 |||||||||||||||||||| Sbjct: 564 tggcctccgacgccgccagc 583
>gb|AF036699.2| Caenorhabditis elegans cosmid F58F6, complete sequence Length = 43764 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 agcttgctgatacttccaag 543 |||||||||||||||||||| Sbjct: 38115 agcttgctgatacttccaag 38134
>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ttgctgatacttccaaggct 546 |||||||||||||||||||| Sbjct: 197645 ttgctgatacttccaaggct 197664
>emb|AL627442.10| Human DNA sequence from clone RP11-296E3 on chromosome 1 Contains the 3' end of the SNX7 gene for sorting nexin7, complete sequence Length = 131815 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 123906 tgatgctgttgttgctttct 123887
>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete sequence Length = 159845 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 114559 tgatgctgttgttgctttct 114578
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcgccccctccgccgctcgc 52 |||||||||||||||||||| Sbjct: 3552064 gcgccccctccgccgctcgc 3552083
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 67 cgccaccagccccgagccgccatggcct 94 ||||||||| |||| ||||||||||||| Sbjct: 1660683 cgccaccagacccgggccgccatggcct 1660656
>emb|AL356378.17| Human DNA sequence from clone RP11-337C18 on chromosome 1 Contains the PRKAB2 gene for protein kinase, AMP-activated, beta 2 non-catalytic subunit protein, a FMO5 gene for the flavin containing monooxygenase 5 protein, the CHD1L gene for chromodomain helicase DNA binding protein 1-like (FLJ22530) protein, a processed pseudogene similar to glucose regulated protein, 58kDa (GRP58), a processed pseudogene similar to chaperonin containing TCP1, subunit 8 (theta) (CCT8) protein, a processed pseudogene similar to ribosomal protein L7a (RPL7A) protein, a processed pseudogene similar to leukotriene B4 12-hydroxydehydrogenase (LTB4DH) protein and three CpG islands, complete sequence Length = 202955 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 186966 gttgatgctgttgttgcttt 186947
>emb|AL355608.11| Human DNA sequence from clone RP11-567J2 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634) and a novel gene similar to ribosomal protein L10 (RPL10), complete sequence Length = 132590 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 46094 tgatgctgttgttgctttct 46113
>emb|AL158038.10| Human DNA sequence from clone RP11-298H15 on chromosome 13q21.1-21.3, complete sequence Length = 160015 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tgctgttgttgctttctatg 508 |||||||||||||||||||| Sbjct: 29373 tgctgttgttgctttctatg 29392
>emb|AL096761.1|HS754E20A Human DNA sequence from clone RP4-754E20 on chromosome 22q13.2, complete sequence Length = 65201 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 27 ctccctgcgccccctccgccgctcgccc 54 ||||| |||||||||||||||| ||||| Sbjct: 55281 ctccccgcgccccctccgccgcccgccc 55254
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 catggcctccgacgccgcca 106 |||||||||||||||||||| Sbjct: 331082 catggcctccgacgccgcca 331101
>emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chromosome 11 Contains a novel gene and a novel pseudogene, complete sequence Length = 208519 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cttccaaggctcaggctcca 555 |||||||||||||||||||| Sbjct: 46276 cttccaaggctcaggctcca 46257
>gb|AF377865.1| Feline papillomavirus putative transforming protein E6 (E6), putative transforming protein E7 (E7), putative replication protein E1 (E1), and putative regulatory protein E2 (E2) genes, complete cds; putative protein E4 (E4) gene, partial cds; and putative minor capsid protein L2 (L2) and putative major capsid protein L1 (L1) genes, complete cds Length = 8300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ttggggagcttgacagtttt 588 |||||||||||||||||||| Sbjct: 3561 ttggggagcttgacagtttt 3542
>gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, complete sequence Length = 133348 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 6682 gttgatgctgttgttgcttt 6663
>gb|AC114945.2| Homo sapiens chromosome 5 clone CTD-2604I2, complete sequence Length = 129575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgcttt 503 |||||||||||||||||||| Sbjct: 29532 gttgatgctgttgttgcttt 29551
>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence Length = 171739 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 59976 tgatgctgttgttgctttct 59995
>gb|AF480454.1| Felis domesticus papillomavirus type 1, complete genome Length = 8300 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ttggggagcttgacagtttt 588 |||||||||||||||||||| Sbjct: 3701 ttggggagcttgacagtttt 3682
>gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21q22.3, complete sequence Length = 170121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ttgctgatacttccaaggct 546 |||||||||||||||||||| Sbjct: 124237 ttgctgatacttccaaggct 124256
>gb|AC026843.9| Homo sapiens chromosome 11, clone RP11-261E12, complete sequence Length = 166287 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 atgctgttgttgctttctat 507 |||||||||||||||||||| Sbjct: 38318 atgctgttgttgctttctat 38299
>gb|AC018600.6| Homo sapiens, clone RP11-26L8, complete sequence Length = 159469 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 atggaaggactagactggcc 356 |||||||||||||||||||| Sbjct: 143540 atggaaggactagactggcc 143521
>gb|AC019240.7|AC019240 Homo sapiens chromosome 18, clone RP11-510D19, complete sequence Length = 175032 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 atggaaggactagactggcc 356 |||||||||||||||||||| Sbjct: 17601 atggaaggactagactggcc 17582
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgacgccgccagccagttcc 115 |||||||||||||||||||| Sbjct: 3473898 cgacgccgccagccagttcc 3473879
>gb|AC021269.4|AC021269 Homo sapiens, clone RP11-15D14, complete sequence Length = 144609 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 atgctgttgttgctttctat 507 |||||||||||||||||||| Sbjct: 131848 atgctgttgttgctttctat 131829
>emb|CR376864.1| Pan troglodytes chromosome X BAC PTB-045G22, complete sequence Length = 151492 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 150658 tgatgctgttgttgctttct 150677
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acaagatccagatccagcgc 135 |||||||||||||||||||| Sbjct: 14357823 acaagatccagatccagcgc 14357804
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggcctccgacgccgccagcc 109 |||||||||||||||||||| Sbjct: 24811498 ggcctccgacgccgccagcc 24811479
>gb|AF484086.1| Lymnaea stagnalis U-type voltage-gated cation channel alpha-1 subunit isoform a mRNA, partial cds Length = 4871 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ttattccagatttgtaccgt 297 |||||||||||||||||||| Sbjct: 44 ttattccagatttgtaccgt 63
>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 ttgacagttttgttggattt 597 |||||||||||||||||||| Sbjct: 53106 ttgacagttttgttggattt 53125
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acaagatccagatccagcgc 135 |||||||||||||||||||| Sbjct: 105098 acaagatccagatccagcgc 105079
>gb|AC013442.11| Homo sapiens BAC clone RP11-387M19 from 2, complete sequence Length = 115484 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 atggaaggactagactggccaggt 360 ||||||||||||||||||| |||| Sbjct: 12537 atggaaggactagactggctaggt 12514
>gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, complete sequence Length = 180226 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 gttgatgctgttgttgctttctat 507 ||||||| |||||||||||||||| Sbjct: 79444 gttgatgatgttgttgctttctat 79467
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 gccccctccgccgctcgcccccgc 58 |||||||||||||| ||||||||| Sbjct: 4821654 gccccctccgccgcccgcccccgc 4821631
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggcctccgacgccgccagcc 109 |||||||||||||||||||| Sbjct: 112299 ggcctccgacgccgccagcc 112280
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccaccagccccgagccg 85 |||||||||||||||||||| Sbjct: 5304863 ccgccaccagccccgagccg 5304882
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggcctccgacgccgccagcc 109 |||||||||||||||||||| Sbjct: 15944 ggcctccgacgccgccagcc 15925
>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggcctccgacgccgccagcc 109 |||||||||||||||||||| Sbjct: 719 ggcctccgacgccgccagcc 738
>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19, complete sequence Length = 143486 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ccgccgctcgcccccgcact 61 |||||||||||||||||||| Sbjct: 12748 ccgccgctcgcccccgcact 12767
>gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147816 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gcaattgcaagtggagtttt 473 |||||||||||||||||||| Sbjct: 72522 gcaattgcaagtggagtttt 72541
>emb|AL954227.3|RP43002I19 Pan troglodytes chromosome 22 BAC RP43-002I19, complete sequence Length = 192219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ttgctgatacttccaaggct 546 |||||||||||||||||||| Sbjct: 120800 ttgctgatacttccaaggct 120819
>gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequence Length = 158963 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tggaaggactagactggcca 357 |||||||||||||||||||| Sbjct: 129001 tggaaggactagactggcca 129020
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acaagatccagatccagcgc 135 |||||||||||||||||||| Sbjct: 14366065 acaagatccagatccagcgc 14366046
>emb|AL954355.10| Mouse DNA sequence from clone RP23-94F6 on chromosome X, complete sequence Length = 133265 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gacctttgatgcctatgttg 163 |||||||||||||||||||| Sbjct: 49240 gacctttgatgcctatgttg 49221
>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence Length = 225432 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 tgatgctgttgttgctttct 505 |||||||||||||||||||| Sbjct: 174941 tgatgctgttgttgctttct 174922
>gb|U22148.1|HSU22148 Human glucagon receptor gene, 5' region Length = 723 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ccgcctccctgcgccccctc 42 |||||||||||||||||||| Sbjct: 312 ccgcctccctgcgccccctc 293
>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4 Length = 212373 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 tggaaggactagactggcca 357 |||||||||||||||||||| Sbjct: 158183 tggaaggactagactggcca 158164
>emb|AL135758.32| Mouse DNA sequence from clone RP21-117J5 on chromosome 5, complete sequence Length = 142667 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gacctttgatgcctatgttg 163 |||||||||||||||||||| Sbjct: 92197 gacctttgatgcctatgttg 92178 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,726,075 Number of Sequences: 3902068 Number of extensions: 4726075 Number of successful extensions: 100976 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 100252 Number of HSP's gapped (non-prelim): 720 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)