ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs) 32 0.92

>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)|
          Length = 1669

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
 Frame = -3

Query: 524 TESADAETSTMASNSAESHRG-AEESPCLMFPDXXXXXXXXXXXXXTNLGCSSSVG---- 360
           T S+ + T+T A+N  E H    E+SP    P              T+  C+SS      
Sbjct: 637 TSSSSSNTATTAANKLEEHSDKPEDSP---LPIASSISGSTPASSITSTSCTSSSSSSAS 693

Query: 359 -LSRCSATRNGSTSDAAVSATPPAWP 285
             S CS++ +GST+ A  +++    P
Sbjct: 694 MSSSCSSSNSGSTTTAPTTSSSAGAP 719


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.130    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,588,111
Number of Sequences: 219361
Number of extensions: 1037697
Number of successful extensions: 2631
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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