ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41f04 |
|---|---|
| Clone Library Name | barley_pub |
>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein| 4.4) (Ultrahigh sulfur keratin-associated protein 4.4) Length = 166 Score = 43.5 bits (101), Expect = 4e-04 Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 3/115 (2%) Frame = +3 Query: 219 CRSLNYRTLSC-PKCHIPWCRRRQ--RSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCRH 389 C++ RT C P C + C R Q ++ C T C C P C QS+ C+ Sbjct: 26 CQTTCCRTTCCRPSCCVSSCCRPQCCQTTCCRTTCCHPSCCVSSCCRPQC--CQSVCCQP 83 Query: 390 TLLCPSSRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCRRCQSMSCRRTLLCPS 554 T P C T CR C P C CQS+ C+ T CPS Sbjct: 84 TCCRPQC------------CQTTCCRTTCCRPSCCRPQC--CQSVCCQPTCCCPS 124
>IBRD1_HUMAN (Q8TC41) IBR domain-containing protein 1| Length = 275 Score = 40.4 bits (93), Expect = 0.003 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 5/121 (4%) Frame = +3 Query: 189 KSRRTLPCPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPW-----CRRRQRSLKCHTP 353 K + +P PS Y+ + CP C WC KCH+PW C+ ++ K Sbjct: 64 KKKGHIPTPSRSESKYK-IQCPTCQFVWC------FKCHSPWHEGVNCKEYKKGDK---- 112 Query: 354 LCRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCRRCQSMSCR 533 R+ + H R+ Q CP+C + QR+ C C +C + C Sbjct: 113 -LLRHWASEIEH-----GQRN----AQKCPKCKIHI----QRTEGCDHMTCSQCNTNFCY 158 Query: 534 R 536 R Sbjct: 159 R 159
>STC_DROME (P40798) Protein shuttle craft| Length = 1106 Score = 38.9 bits (89), Expect = 0.010 Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 10/124 (8%) Frame = +3 Query: 207 PCPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 P P+C + RTL C K P Q KCH C P C + + CR Sbjct: 630 PIPTCEGICSRTLRCGKPAHP----HQCGSKCHLGQC-----------PPCPKQTGVKCR 674 Query: 387 HTLLCPSSRSLNYLIQLCPRCHTPLCRRR---QRSL---KCHTPWC----RRCQSMSCRR 536 C + QLC R C+RR +RS KC+ C C + C R Sbjct: 675 ----CGHMDQMIKCRQLCNRADDARCKRRCTKKRSCGKHKCNVECCIDIDHDC-PLPCNR 729 Query: 537 TLLC 548 TL C Sbjct: 730 TLSC 733
>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated| protein 4.13) (Ultrahigh sulfur keratin-associated protein 4.13) Length = 106 Score = 37.7 bits (86), Expect = 0.022 Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 11/88 (12%) Frame = +3 Query: 300 CHTPWCRRRQRSLKCHTPLCRR---YQSMSCRHTLLCPSSRSLNYLIQLC--------PR 446 C T CR C P C R QS+ C+ T CPS Y + C R Sbjct: 26 CQTTCCRTTCCRPSCCRPSCCRPQCCQSVCCQPTCCCPS-----YCVSSCCRPQCCQTTR 80 Query: 447 CHTPLCRRRQRSLKCHTPWCRRCQSMSC 530 C T CR +C+ P C QS+ C Sbjct: 81 CRTTCCRPSCCVSRCYRPHCG--QSLCC 106 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Frame = +3 Query: 447 CHTPLCRRRQRSLKCHTPWCRR---CQSMSCRRTLLCPS 554 C T CR C P C R CQS+ C+ T CPS Sbjct: 26 CQTTCCRTTCCRPSCCRPSCCRPQCCQSVCCQPTCCCPS 64
>MTB1_BACSQ (Q9LAI2) Modification methylase BslI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase BslI) (M.BslI) Length = 912 Score = 36.2 bits (82), Expect = 0.064 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +3 Query: 195 RRTLPCPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRS 335 +R +PCPSC SLN S P+ + RS +C +P+C R +S Sbjct: 465 QRRIPCPSCGSLNISGNSYPEIN-------NRSWECKSPYCPDRSKS 504
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 36.2 bits (82), Expect = 0.064 Identities = 37/118 (31%), Positives = 42/118 (35%), Gaps = 3/118 (2%) Frame = +3 Query: 210 CPSC-RSLNYRTLSC-PKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSC 383 CPSC ++ RT C P C P C + C+ P C CH C SC Sbjct: 22 CPSCCQTTCCRTTCCRPSCCKPQCCQSV----CYQPTC--------CHPSCC----ISSC 65 Query: 384 RHTLLCPSSRSLNYLIQLC-PRCHTPLCRRRQRSLKCHTPWCRRCQSMSCRRTLLCPS 554 C SS C P C P C C T CR + CR T CPS Sbjct: 66 CRPYCCESS--------CCRPCCCRPSC--------CQTTCCR---TTCCRTTCCCPS 104
>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor| Length = 297 Score = 35.0 bits (79), Expect = 0.14 Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Frame = +3 Query: 177 CQSPKSRRTLPCPSCRSLNYRTLSCPKCHI--PWCRRRQRSLKCHTPWCRRRQRSLKCHT 350 C++ R P C + + PKC P CR + K P CR + K Sbjct: 45 CETEPPRCETEPPRCET------TTPKCETTPPTCRTEPPTCKTEPPTCRTEPPTCKTKP 98 Query: 351 PLCRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHT--PLCRRRQRSLKCHTPWCR 509 P CR + +CR ++ + P C T P CR + K P CR Sbjct: 99 PTCRT-EPPTCRTEPPTCKTKPPTCKTE-PPTCKTEPPTCRTEPPTCKTEPPTCR 151
>KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3| Length = 131 Score = 34.7 bits (78), Expect = 0.19 Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 5/126 (3%) Frame = +3 Query: 177 CQSPKSRRTLPCPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPL 356 C P+ R PC CR ++ +T+S P +P C R P C C P+ Sbjct: 18 CLQPRYYRD-PC-CCRPVSCQTVSRPVTFVPRCTR---------PICE------PCRRPV 60 Query: 357 C---RRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCR--RCQS 521 C Q CR CP+S + P C C + S++C P CR CQ Sbjct: 61 CCDPCSLQEGCCRPITCCPTSCQ---AVVCRPCCWATTC-CQPVSVQC--PCCRPTSCQP 114 Query: 522 MSCRRT 539 C RT Sbjct: 115 APCSRT 120
>HSPC_ELECI (P83183) Cysteine-rich protamine| Length = 84 Score = 33.9 bits (76), Expect = 0.32 Identities = 28/91 (30%), Positives = 37/91 (40%) Frame = +3 Query: 246 SCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCRHTLLCPSSRSLNY 425 S P+C P C+ R RS CRR +R C R +S CR CP Sbjct: 4 SKPRCR-PRCKPRCRSRSKKR--CRRCRRRCSRIVKKCCRRRSKCCRRRRRCPCP----- 55 Query: 426 LIQLCPRCHTPLCRRRQRSLKCHTPWCRRCQ 518 CPR C+RR + +C +RC+ Sbjct: 56 ----CPRKKLRCCKRRPKR-RCPKRKKKRCR 81
>HSP1_PONPY (P35310) Sperm protamine P1 (Cysteine-rich protamine)| Length = 50 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRRQR + C+ R+R+++C CRR + CR Sbjct: 15 CRRRQRCHRRRRRCCQTRRRAMRC----CRRRYRLRCR 48
>HSP1_PAPCY (Q7JIX8) Sperm protamine P1| Length = 50 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R + CR R+R+++C CRR + CR Sbjct: 15 CRRRRRCRRRRRRRCRARRRAMRC----CRRRYRLRCR 48
>HSP1_MACMU (Q9GJU4) Sperm protamine P1| Length = 50 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R + CR R+R+++C CRR + CR Sbjct: 15 CRRRRRCRRRRRRRCRARRRAMRC----CRRRYRLRCR 48
>HSP1_HORSE (P15341) Sperm protamine P1 (Cysteine-rich protamine) (Protamine| ST1) Length = 49 Score = 32.3 bits (72), Expect = 0.92 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R +C RRR+RS++ CRRY + CR Sbjct: 14 CRRRRRR-RCR----RRRRRSVRQRRVCCRRYTVLRCR 46
>K1196_HUMAN (Q96KM6) Zinc finger protein KIAA1196| Length = 892 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 210 CPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRS---LKCHT 350 CP+C + +TL K H+ C++ Q +LKC CR++ +S L HT Sbjct: 512 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ--HCRKQFKSKAGLNYHT 559
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 31.6 bits (70), Expect = 1.6 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Frame = +3 Query: 177 CQSPKSRRTLPC-PSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTP 353 C P + + C P+C + C C C P C + C P Sbjct: 88 CCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSCQQSCCVPVCCKPV----CCVP 143 Query: 354 LCRRYQSMSCRHTLLCPSSRSLNYLIQLC--PRCHTPLCRRRQRSLKCHTPWCRRCQSMS 527 C S C+H+ P+ + + Q C P C P+C + C P C + Sbjct: 144 TCSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKP----ICCVPVCSGASTSC 199 Query: 528 CRRTLLCPS 554 C+++ P+ Sbjct: 200 CQQSSCQPA 208
>HSP1_NASLA (Q9GKQ3) Sperm protamine P1| Length = 50 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CR RQR + CR R+R+++C CRR + CR Sbjct: 15 CRPRQRCRRRRRRSCRARRRAMRC----CRRRYRLRCR 48 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 432 QLCPRCHTPLCRRRQRSLKCHTPWCRRCQSMSCRR 536 Q C R CR R+R+++C CRR + CRR Sbjct: 19 QRCRRRRRRSCRARRRAMRC----CRRRYRLRCRR 49
>HSP1_OTOHE (Q8WNZ2) Sperm protamine P1| Length = 49 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R C R++R C CRRY M CR Sbjct: 14 CRRRRRKCYRRRRRCSRKRRRRVC----CRRYTVMRCR 47
>KR410_HUMAN (Q9BYQ7) Keratin-associated protein 4-10 (Keratin-associated| protein 4.10) (Ultrahigh sulfur keratin-associated protein 4.10) Length = 127 Score = 30.8 bits (68), Expect = 2.7 Identities = 33/127 (25%), Positives = 42/127 (33%) Frame = +3 Query: 177 CQSPKSRRTLPCPSCRSLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPL 356 C + T PSC T CP C + C R C C C T Sbjct: 15 CDQGLCQETCCRPSCCQT---TCCCPSCVVSSCCRPS----CSQTTC--------CQTTC 59 Query: 357 CRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCRRCQSMSCRR 536 CR SC + C ++ + + C R PLC C T C SC R Sbjct: 60 CRP----SCCRPVCCQTTCRPSCGVSSCCR---PLC--------CQTTCRPSCGVSSCCR 104 Query: 537 TLLCPSS 557 L C ++ Sbjct: 105 PLCCQTT 111
>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 105 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +3 Query: 273 CRRRQRSLKCHTP----WCRRRQRSLKCHTPLCRRY 368 CRRR+R CH CRR +R +C CRR+ Sbjct: 68 CRRRRRHSCCHRRRHRRGCRRSRRRRRCKCRKCRRH 103
>HSP1_MURCY (Q8WNY7) Sperm protamine P1| Length = 47 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R C RR+R C CRRY + CR Sbjct: 12 CRRRRRRCHRRRRRCSRRRRRRVC----CRRYTVIRCR 45
>KRA24_HUMAN (Q9BYR9) Keratin-associated protein 2-4 (Keratin-associated protein| 2.4) (High sulfur keratin-associated protein 2.4) Length = 128 Score = 30.8 bits (68), Expect = 2.7 Identities = 22/72 (30%), Positives = 30/72 (41%) Frame = +3 Query: 342 CHTPLCRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCRRCQS 521 C P C R ++C+ T+ P + PRC P+C +R + C C Q Sbjct: 25 CRDPCCCR--PVTCQTTVCRP--------VTCVPRCTRPICEPCRRPVCCDP--C-SLQE 71 Query: 522 MSCRRTLLCPSS 557 CR CPSS Sbjct: 72 GCCRPITCCPSS 83
>DGKG_HUMAN (P49619) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride| kinase gamma) (DGK-gamma) (DAG kinase gamma) Length = 791 Score = 30.4 bits (67), Expect = 3.5 Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Frame = +3 Query: 249 CPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCRHTLLCPSSRSLNYL 428 C CHI R++ L C +R + + P C + S + R + + Sbjct: 285 CNFCHIMLMGVRKQGLCCTYCKYTVHERCVSKNIPGCVKTYSKAKRSGEVMQHAWVEGNS 344 Query: 429 IQLCPRCHTPLCRRRQRSLKC-------HTPWCRRCQSMSCRRTLLC 548 C RCH +S+KC H WCR C + LC Sbjct: 345 SVKCDRCH--------KSIKCYQSVTARHCVWCRMTFHRKCELSTLC 383
>PRAX_RAT (Q63425) Periaxin| Length = 1383 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 3/28 (10%) Frame = +2 Query: 395 AMPELPKPELPHPAVPEVPH---PIVPE 469 A+P++P PEL P VP+VP P VPE Sbjct: 688 AVPDVPLPELQLPKVPQVPDVHLPKVPE 715
>HSP1_EQUAS (Q66QC7) Sperm protamine P1| Length = 49 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R +C RRR+R ++ CRRY + CR Sbjct: 14 CRRRRRR-RCR----RRRRRCVRRRRVCCRRYTVLRCR 46
>TRAF1_HUMAN (Q13077) TNF receptor-associated factor 1 (Epstein-Barr| virus-induced protein 6) Length = 416 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = +3 Query: 177 CQSPKSRRTLPCPSCRSLNYRT---LSCPKC 260 CQ PK R L C C S N R CPKC Sbjct: 27 CQDPKEPRALCCAGCLSENPRNGEDQICPKC 57
>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)| Length = 518 Score = 30.0 bits (66), Expect = 4.6 Identities = 27/86 (31%), Positives = 32/86 (37%) Frame = -1 Query: 497 GVALQAPLASPAQWGVAPRAQLDEVIQXXXXXXXXXXXXXXALVPPAQRGVTLQAPLASP 318 G A A A+PA G AP A A P A+ AP +P Sbjct: 439 GAAPPAEGAAPAAEGAAPPAD------GAAPPAEAAAAPADAAAPAAEA-----APAEAP 487 Query: 317 APRGVALQAPLASPAPRDVALRAREG 240 A A +AP A AP + A A EG Sbjct: 488 AAEATAAEAPPAEAAPAEAAPAAAEG 513
>INHBE_RAT (O88959) Inhibin beta E chain precursor (Activin beta-E chain)| Length = 350 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Frame = +3 Query: 318 RRRQRSLKCHTPLCRR------YQSMSCRHTLLCPSSRSLNYLIQLCP 443 RRR + + TPLC R +Q + R +L P LNY CP Sbjct: 234 RRRTPTCESETPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCSGQCP 281
>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)] Length = 107 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 228 LNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRY 368 ++ R SC + CR R+R H CRR +R +C CRR+ Sbjct: 63 IHKRRRSCRRRRRHSCRHRRR----HRRGCRRSRRRRRCRCRKCRRH 105 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/70 (28%), Positives = 25/70 (35%) Frame = +3 Query: 303 HTPWCRRRQRSLKCHTPLCRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCHTPLCRRRQRS 482 H R+R + CRR + SCRH R H CRR +R Sbjct: 52 HRRCSRKRLHRIHKRRRSCRRRRRHSCRHR-----------------RRHRRGCRRSRRR 94 Query: 483 LKCHTPWCRR 512 +C CRR Sbjct: 95 RRCRCRKCRR 104
>HSP1_RABIT (P10119) Sperm protamine P1 (Cysteine-rich protamine)| Length = 49 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R + C +R+R KC CRR ++ CR Sbjct: 14 CRRRRRRCRRRRRRCCQRRRVRKC----CRRTYTLRCR 47
>SPR1A_RAT (Q63532) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPRR1)| Length = 152 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = +2 Query: 398 MPELPKPELP---HPAVPEVPHPIVPE 469 +PE +P++P HP PE HP+VPE Sbjct: 92 VPEPCQPKVPEPCHPKAPEPCHPVVPE 118
>PRKN2_HUMAN (O60260) Parkin (EC 6.3.2.-) (Ubiquitin E3 ligase PRKN) (Parkinson| juvenile disease protein 2) (Parkinson disease protein 2) Length = 465 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Frame = +3 Query: 405 SSRSLNYLIQLCPRCHTPLCRRRQ-RSLKCHTPWCRR--CQSMSCRRTLLC 548 S ++ + CPRCH P+ + +KC P CR C + C +C Sbjct: 407 SKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVC 457
>DNAA_AZOSE (Q5P4P0) Chromosomal replication initiator protein dnaA| Length = 481 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -1 Query: 362 PAQRGVTLQAPLASPAPRGVALQAPLASPAPRDVALRARE 243 PA R V P+A PAP QAP A+ A V R E Sbjct: 89 PAARPVIGSGPVAGPAPAPTPSQAPAATAAAPAVVTRPAE 128
>CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1| Length = 184 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -1 Query: 365 PPAQRGVTLQAPLASPAPRGVALQAPLASPAPRDVALRAR 246 PPA R AP P PR V PL +PAP+ + AR Sbjct: 30 PPASR-----APPPPPPPRPVVPSQPLPAPAPQPAIVPAR 64
>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)| Length = 2813 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Frame = +3 Query: 399 CPSSRSLNYLIQLCPRCHTPLC------RRRQRSLKCHTPWCRRCQSMSC 530 C S R +N +Q CP P C R RQ + +C + C +SC Sbjct: 2283 CLSGRKVNCTLQPCPTARAPTCGPCEVARLRQNAEQCCPEYECVCDLVSC 2332
>HSP1_NATMI (Q8WNZ4) Sperm protamine P1| Length = 49 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +3 Query: 273 CRRRQRSLKCHTP---WCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R +C T CRRR+R + CRRY + CR Sbjct: 14 CRRRRR--RCRTRRRRCCRRRRRRV-----CCRRYTVVRCR 47
>HSP1_COLBA (Q8MJT0) Sperm protamine P1| Length = 50 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CRRR+R + CR R+ +++C CRR CR Sbjct: 15 CRRRRRCRRRRRQRCRARRTAMRC----CRRRYRRRCR 48
>CJ003_HUMAN (Q53EZ4) Protein C10orf3| Length = 464 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +3 Query: 225 SLNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRR 323 +LN + CPKC+I + R L H +C + Sbjct: 432 ALNESLVECPKCNIQYPATEHRDLLVHVEYCSK 464
>ODO2_AZOVI (P20708) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) Length = 398 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = -1 Query: 350 GVTLQAPLASPAPRGVA---LQAPLASPAPRDVA 258 G AP A+PAP A +AP+ SPA R +A Sbjct: 79 GAATAAPAAAPAPAAAAPAAAEAPILSPAARKIA 112
>CNTP1_MOUSE (O54991) Contactin-associated protein 1 precursor (Caspr) (Caspr1)| (Neurexin 4) (Neurexin IV) (Paranodin) (NCP1) (MHDNIV) Length = 1385 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = -1 Query: 362 PAQRGVTLQAPLASPAPRGVALQAPLASPAPRD 264 PAQ + AP P P AP + P PRD Sbjct: 1340 PAQAPAPIPAPTQLPTPAPAPAPAPASGPGPRD 1372
>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 937 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCRHTLLCPSSRSLNYLIQLCPRCH 452 CRR + C T R + L C ++ +C LCP+ + +LC RCH Sbjct: 714 CRRCHKG--CETCTGRSPTQCLSCRRGFYHHQETNTC--VTLCPAGLYADESQRLCLRCH 769 Query: 453 TPLCRR 470 P C++ Sbjct: 770 -PSCQK 774
>VWF_PIG (Q28833) Von Willebrand factor precursor (vWF) (Fragment)| Length = 2482 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Frame = +3 Query: 399 CPSSRSLNYLIQLCPRCHTPLC------RRRQRSLKCHTPWCRRCQSMSC 530 C S R +N +Q CP P C R RQ + +C + C +SC Sbjct: 1952 CLSGRRVNCTLQPCPTARAPACGLCEVARLRQEAHQCCPEYECVCDLVSC 2001
>DNLJ_CHLMU (Q9PKP2) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 660 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 435 LCPRCHTPLCRRRQRSLKCHTPWC 506 LCP CH P+ + R S++C P C Sbjct: 402 LCPMCHNPVIKERV-SVRCTNPLC 424
>INHBE_MOUSE (O08717) Inhibin beta E chain precursor (Activin beta-E chain)| Length = 350 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Frame = +3 Query: 318 RRRQRSLKCHTPLCRR------YQSMSCRHTLLCPSSRSLNYLIQLCP 443 RRR + + TPLC R +Q + R +L P LNY CP Sbjct: 234 RRRTPTCEPETPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCSGQCP 281
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/96 (22%), Positives = 36/96 (37%) Frame = +3 Query: 228 LNYRTLSCPKCHIPWCRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCRHTLLCPS 407 + R +SCP+ +P C + L C T C C + C R ++ T++ P Sbjct: 2542 IQQRNVSCPQLEVPVCPSGFQ-LSCKTSAC--------CPSCRCERMEACMLNGTVIGPG 2592 Query: 408 SRSLNYLIQLCPRCHTPLCRRRQRSLKCHTPWCRRC 515 + + C RC + L+C C C Sbjct: 2593 KTVMIDVCTTC-RCMVQVGVISGFKLECRKTTCNPC 2627
>YEBS_ECOLI (P0AD03) Inner membrane protein yebS| Length = 427 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 1/19 (5%) Frame = +3 Query: 438 CPRCHTPLCRRRQRSL-KC 491 CPRCH PL RR+ SL KC Sbjct: 248 CPRCHIPLRLRRRHSLQKC 266
>YEBS_ECO57 (P0AD04) Inner membrane protein yebS| Length = 427 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 1/19 (5%) Frame = +3 Query: 438 CPRCHTPLCRRRQRSL-KC 491 CPRCH PL RR+ SL KC Sbjct: 248 CPRCHIPLRLRRRHSLQKC 266
>HSP1_TRAJO (Q8MJS8) Sperm protamine P1| Length = 50 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 273 CRRRQRSLKCHTPWCRRRQRSLKCHTPLCRRYQSMSCR 386 CR R+R + CR R+R+ +C CRR + CR Sbjct: 15 CRPRRRCRRRRRQSCRARRRATRC----CRRRYRLRCR 48
>HSP1_PIPSA (Q7JH04) Sperm protamine P1| Length = 45 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = +3 Query: 273 CRRRQRSLKCHTP---WCRRRQRSLKCHTPLCRRYQ 371 CRRR+R +CH CRRR+R C CRRY+ Sbjct: 12 CRRRRR--RCHRRRRRCCRRRRRRRAC----CRRYR 41
>HSP1_EPTBN (Q8WMD3) Sperm protamine P1| Length = 45 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = +3 Query: 273 CRRRQRSLKCHTP---WCRRRQRSLKCHTPLCRRYQ 371 CRRR+R +CH CRRR+R C CRRY+ Sbjct: 12 CRRRRR--RCHRRRRRCCRRRRRRRAC----CRRYR 41
>DFR12_MOUSE (P50716) Defensin-related cryptdin, related sequence 12 precursor| (Cryptdin-related protein 4C-5) (CRS4C) Length = 91 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +3 Query: 189 KSRRTLPCPSCRSLNY--RTLSCPKC 260 ++RR PCPSC S + R L CP C Sbjct: 61 RARRCPPCPSCLSCPWCPRCLRCPMC 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,387,428 Number of Sequences: 219361 Number of extensions: 1365612 Number of successful extensions: 6191 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4756 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6050 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
