ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41f01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D08, full insert sequence Length = 1230 Score = 281 bits (142), Expect = 1e-72 Identities = 208/230 (90%) Strand = Plus / Plus Query: 191 ggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacggcaa 250 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 132 ggagaagggggaggcggtgtcgctgacggtgtggcggcggtcgctgctgttcaacgggaa 191 Query: 251 ggggttcacggtgttcgacagcaacggcaacctcgtcttccgcgtcgagacctacgcccg 310 ||||||||||||||||||| |||| || |||||||| ||||||||||||| ||||||| | Sbjct: 192 ggggttcacggtgttcgacggcaaggggaacctcgtgttccgcgtcgagagctacgccgg 251 Query: 311 cggctcgccccgcgaggtcgtactcatggacgccgacggcctcgccctcctcaccgtccg 370 || ||||| | |||||||| ||||||||||||||||||| ||||||||||||| |||| Sbjct: 252 ggggtcgccgagggaggtcgtgctcatggacgccgacggccgcgccctcctcaccatccg 311 Query: 371 ccgcaagaagctgagtttggcggaggagtggctcgtctacgacggcgacg 420 ||||||||||||||| || ||||| ||||||||| ||||||||||||||| Sbjct: 312 ccgcaagaagctgagcttcgcggacgagtggctcatctacgacggcgacg 361
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| Sbjct: 59272 ggaggagaagggggaggcggtgtcgctgacggtgtggcggcggtcgctgctgttcaacgg 59331 Query: 248 caaggggttcacggtgttcgacagcaacggcaacctcgtcttccgcgtcgagacctacgc 307 ||||||||||||||||||||| |||| || |||||||| ||||||||||||| |||||| Sbjct: 59332 gaaggggttcacggtgttcgacggcaaggggaacctcgtgttccgcgtcgagagctacgc 59391 Query: 308 ccgcggctcgccccgcgaggtcgtactcatggacgccgacggcctcgccctcctcaccgt 367 | | || ||||| | |||||||| ||||||||||||||||||| ||||||||||||| | Sbjct: 59392 cggggggtcgccgagggaggtcgtgctcatggacgccgacggccgcgccctcctcaccat 59451 Query: 368 ccgccgcaag 377 |||||||||| Sbjct: 59452 ccgccgcaag 59461 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 376 agaagctgagtttggcggaggagtggctcgtctacgacggcgacg 420 |||||||||| || ||||| ||||||||| ||||||||||||||| Sbjct: 59564 agaagctgagcttcgcggacgagtggctcatctacgacggcgacg 59608
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| Sbjct: 14111717 ggaggagaagggggaggcggtgtcgctgacggtgtggcggcggtcgctgctgttcaacgg 14111776 Query: 248 caaggggttcacggtgttcgacagcaacggcaacctcgtcttccgcgtcgagacctacgc 307 ||||||||||||||||||||| |||| || |||||||| ||||||||||||| |||||| Sbjct: 14111777 gaaggggttcacggtgttcgacggcaaggggaacctcgtgttccgcgtcgagagctacgc 14111836 Query: 308 ccgcggctcgccccgcgaggtcgtactcatggacgccgacggcctcgccctcctcaccgt 367 | | || ||||| | |||||||| ||||||||||||||||||| ||||||||||||| | Sbjct: 14111837 cggggggtcgccgagggaggtcgtgctcatggacgccgacggccgcgccctcctcaccat 14111896 Query: 368 ccgccgcaag 377 |||||||||| Sbjct: 14111897 ccgccgcaag 14111906 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 376 agaagctgagtttggcggaggagtggctcgtctacgacggcgacg 420 |||||||||| || ||||| ||||||||| ||||||||||||||| Sbjct: 14112009 agaagctgagcttcgcggacgagtggctcatctacgacggcgacg 14112053 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 230 gtcgctgctcttcaacggcaaggggttcacggtgttcgac 269 |||||| || |||||| ||| ||||||||||||||||||| Sbjct: 23681164 gtcgctactgttcaactgcagggggttcacggtgttcgac 23681125 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 324 gaggtcgtactcatggacgccgacggcctcgccctcctcaccgtccgccgcaagaag 380 ||||| || ||||||||||||| ||| | || | ||||||||||||||||||||| Sbjct: 23681070 gaggtggtgctcatggacgccgcgggcgtgcccgtgctcaccgtccgccgcaagaag 23681014
>ref|NM_191086.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 642 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||| ||| |||||||| | |||| || ||||||||| ||||||||| |||||| | Sbjct: 72 ggaggaggaggaggaggcggcggcgctgacggtgtggcggaagtcgctgctgttcaactg 131 Query: 248 caaggggttcacggtgttcgac 269 |||||||||||||||||||||| Sbjct: 132 caaggggttcacggtgttcgac 153 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 cgaggtcgtactcatggacgccgacggc 350 ||||||||| ||||||||||||| |||| Sbjct: 207 cgaggtcgtcctcatggacgccgccggc 234
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||| ||| |||||||| | |||| || ||||||||| ||||||||| |||||| | Sbjct: 34794636 ggaggaggaggaggaggcggcggcgctgacggtgtggcggaagtcgctgctgttcaactg 34794695 Query: 248 caaggggttcacggtgttcgac 269 |||||||||||||||||||||| Sbjct: 34794696 caaggggttcacggtgttcgac 34794717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cggcgacggcgacgagctggc 433 ||||||||||||||||||||| Sbjct: 14085081 cggcgacggcgacgagctggc 14085101 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 tcgtctacgacggcgacggcgacg 426 ||||| |||||||||||||||||| Sbjct: 42195248 tcgtcgacgacggcgacggcgacg 42195271 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 cgaggtcgtactcatggacgccgacggc 350 ||||||||| ||||||||||||| |||| Sbjct: 34794771 cgaggtcgtcctcatggacgccgccggc 34794798 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ctacgcccgcggctcgcccc 321 |||||||||||||||||||| Sbjct: 30822094 ctacgcccgcggctcgcccc 30822075 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gtcgccggcgcgatcgctgg 516 |||||||||||||||||||| Sbjct: 11220310 gtcgccggcgcgatcgctgg 11220291
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||| ||| |||||||| | |||| || ||||||||| ||||||||| |||||| | Sbjct: 109876 ggaggaggaggaggaggcggcggcgctgacggtgtggcggaagtcgctgctgttcaactg 109935 Query: 248 caaggggttcacggtgttcgac 269 |||||||||||||||||||||| Sbjct: 109936 caaggggttcacggtgttcgac 109957 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 cgaggtcgtactcatggacgccgacggc 350 ||||||||| ||||||||||||| |||| Sbjct: 110011 cgaggtcgtcctcatggacgccgccggc 110038
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454H12 Length = 161004 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcggtgtcgctcaccgtgtggcggcggtcgctgctcttcaacgg 247 ||||||| ||| |||||||| | |||| || ||||||||| ||||||||| |||||| | Sbjct: 53808 ggaggaggaggaggaggcggcggcgctgacggtgtggcggaagtcgctgctgttcaactg 53867 Query: 248 caaggggttcacggtgttcgac 269 |||||||||||||||||||||| Sbjct: 53868 caaggggttcacggtgttcgac 53889 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 cgaggtcgtactcatggacgccgacggc 350 ||||||||| ||||||||||||| |||| Sbjct: 53943 cgaggtcgtcctcatggacgccgccggc 53970
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 79.8 bits (40), Expect = 9e-12 Identities = 158/193 (81%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 230 gtcgctgctcttcaacggcaaggggttcacggtgttcgacagcaacggcaacctcgtctt 289 |||||||||||||||| || | || ||||| || | |||| ||||||| |||||| ||| Sbjct: 184350 gtcgctgctcttcaactgcgacggcttcaccgtctacgacgccaacggcgacctcgcctt 184409 Query: 290 ccgcgtcgagacctacgcccgcggctcgccccgc-gaggtcgtactcatggacgccgacg 348 ||||||||| ||||||| | |||| ||| |||||||| ||||||||||||| || Sbjct: 184410 ccgcgtcgactgctacgccagg----cgccacgccgaggtcgtgctcatggacgccg-cg 184464 Query: 349 gcctcgcc-ctcctcaccgtccgccgcaagaagctgagtttggcggaggagtggctcgtc 407 | |||| |||||||||||||||||||||| ||| || |||||||| ||||||||| Sbjct: 184465 ggggcgccgctcctcaccgtccgccgcaagaggctcagcctggcggagcgctggctcgtc 184524 Query: 408 tacgacggcgacg 420 ||||||||||||| Sbjct: 184525 tacgacggcgacg 184537 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 219 gtgtggcggcggtcgctgctcttcaacggcaaggggttcacggtgttcgacagcaacggc 278 |||||||| ||||||||||||||||| || | || ||||| || |||||| ||||||| Sbjct: 199993 gtgtggcgcaggtcgctgctcttcaactgcgacggcttcaccgtcttcgacgccaacggc 200052 Query: 279 aacctcgtcttccgcgtcga 298 |||||| |||||||||||| Sbjct: 200053 gacctcgccttccgcgtcga 200072 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 323 cgaggtcgtactcatggacgccgacggcctcgcc-ctcctcaccgtccgccgcaagaagc 381 ||||||||| ||||||||||||| ||| |||| |||||||||||||||||||||| || Sbjct: 240986 cgaggtcgtgctcatggacgccg-cgggggcgccgctcctcaccgtccgccgcaagaggc 240928 Query: 382 tgagtttggcggaggagtggctcgtctacgacggcgacg 420 | || |||| ||| |||| ||||||| ||||||||| Sbjct: 240927 tcagcctggccgagcgctggcacgtctaccacggcgacg 240889 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 caaggtgcaccccaacgccgc 157 ||||||||||||||||||||| Sbjct: 241199 caaggtgcaccccaacgccgc 241179 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 caaggtgcaccccaacgccgc 157 ||||||||||||||||||||| Sbjct: 184236 caaggtgcaccccaacgccgc 184256
>ref|XM_475442.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 705 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 230 gtcgctgctcttcaacggcaaggggttcacggtgttcgac 269 |||||| || |||||| ||| ||||||||||||||||||| Sbjct: 150 gtcgctactgttcaactgcagggggttcacggtgttcgac 189 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 324 gaggtcgtactcatggacgccgacggcctcgccctcctcaccgtccgccgcaagaag 380 ||||| || ||||||||||||| ||| | || | ||||||||||||||||||||| Sbjct: 244 gaggtggtgctcatggacgccgcgggcgtgcccgtgctcaccgtccgccgcaagaag 300
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15, complete sequence Length = 137357 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 230 gtcgctgctcttcaacggcaaggggttcacggtgttcgac 269 |||||| || |||||| ||| ||||||||||||||||||| Sbjct: 71169 gtcgctactgttcaactgcagggggttcacggtgttcgac 71130 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 324 gaggtcgtactcatggacgccgacggcctcgccctcctcaccgtccgccgcaagaag 380 ||||| || ||||||||||||| ||| | || | ||||||||||||||||||||| Sbjct: 71075 gaggtggtgctcatggacgccgcgggcgtgcccgtgctcaccgtccgccgcaagaag 71019
>dbj|AK071834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118G11, full insert sequence Length = 930 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 230 gtcgctgctcttcaacggcaaggggttcacggtgttcgac 269 |||||| || |||||| ||| ||||||||||||||||||| Sbjct: 218 gtcgctactgttcaactgcagggggttcacggtgttcgac 257 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 324 gaggtcgtactcatggacgccgacggcctcgccctcctcaccgtccgccgcaagaag 380 ||||| || ||||||||||||| ||| | || | ||||||||||||||||||||| Sbjct: 312 gaggtggtgctcatggacgccgcgggcgtgcccgtgctcaccgtccgccgcaagaag 368
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 cggcgacggcgacgagctggcgc 435 ||||||||||||||||||||||| Sbjct: 22202473 cggcgacggcgacgagctggcgc 22202451
>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence Length = 193264 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 42 cctttgctttgacttcctctgca 64 ||||||||||||||||||||||| Sbjct: 95711 cctttgctttgacttcctctgca 95689
>gb|AC137695.3| Homo sapiens 3 BAC RP13-685P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138278 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 42 cctttgctttgacttcctctgca 64 ||||||||||||||||||||||| Sbjct: 109590 cctttgctttgacttcctctgca 109612
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 42 cctttgctttgacttcctctgca 64 ||||||||||||||||||||||| Sbjct: 157106 cctttgctttgacttcctctgca 157128
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 cggcgacggcgacgagctggcgc 435 ||||||||||||||||||||||| Sbjct: 22371 cggcgacggcgacgagctggcgc 22349
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 cggcgacggcgacgagctggcgc 435 ||||||||||||||||||||||| Sbjct: 123966 cggcgacggcgacgagctggcgc 123944
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence Length = 175121 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 42 cctttgctttgacttcctctgca 64 ||||||||||||||||||||||| Sbjct: 103007 cctttgctttgacttcctctgca 103029
>ref|XM_747911.1| Aspergillus fumigatus Af293 molybdopterin cofactor biosynthetic protein (Afu1g16380) partial mRNA Length = 1323 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 cctcgccctcctcaccgtccgc 371 |||||||||||||||||||||| Sbjct: 161 cctcgccctcctcaccgtccgc 182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 gcggcggaggagaagggggagg 204 |||||||||||||||||||||| Sbjct: 24223277 gcggcggaggagaagggggagg 24223256 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ggcggaggagaagggggaggcggtg 209 |||||||||||||||| |||||||| Sbjct: 25844337 ggcggaggagaaggggaaggcggtg 25844361 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cggcggaggagaagggggag 203 |||||||||||||||||||| Sbjct: 27872804 cggcggaggagaagggggag 27872785 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 25531638 cgacggcgacggcgacgagc 25531657
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 gcggcggaggagaagggggagg 204 |||||||||||||||||||||| Sbjct: 34828 gcggcggaggagaagggggagg 34807
>gb|AY107588.1| Zea mays PCO070301 mRNA sequence Length = 805 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 ccgtgtggcggcggtcgctgct 238 |||||||||||||||||||||| Sbjct: 310 ccgtgtggcggcggtcgctgct 289
>gb|AC152104.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A2, complete sequence Length = 37168 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 tcgtctacgacggcgacggcgacga 427 |||||| |||||||||||||||||| Sbjct: 6737 tcgtcttcgacggcgacggcgacga 6761
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 gcggcggaggagaagggggaggcgg 207 |||||||||||| |||||||||||| Sbjct: 1882198 gcggcggaggaggagggggaggcgg 1882174 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 335 catggacgccgacggcctcgccctcctc 362 |||||||||| |||||||||||||||| Sbjct: 3565421 catggacgccatcggcctcgccctcctc 3565448
>ref|XM_469240.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2271 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 725 acgacggcgacggcgacgagc 745
>ref|NM_193012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ggcggaggagaagggggaggcggtg 209 |||||||||||||||| |||||||| Sbjct: 3 ggcggaggagaaggggaaggcggtg 27
>gb|AY657530.1| Synthetic construct Peudomonas aeruginosa clone FLH040524.01F PA1359 gene, partial cds Length = 657 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 404 cgtctacgacggcgacggcgacgag 428 |||| |||||||||||||||||||| Sbjct: 600 cgtcaacgacggcgacggcgacgag 624
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 26286162 acgacggcgacggcgacgagc 26286182 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 21907891 acgacggcgacggcgacgag 21907910 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 10881711 cgacggcgacggcgacgagc 10881730
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 104478 acgacggcgacggcgacgagc 104458
>gb|AC150251.1| Uncultured bacterium zdt-33i5 clone zdt-33i5, complete sequence Length = 36957 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ctgccgtcgatgaccagggtc 137 ||||||||||||||||||||| Sbjct: 15964 ctgccgtcgatgaccagggtc 15984
>gb|AC068657.6| Homo sapiens chromosome 5 clone CTB-67I13, complete sequence Length = 128332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atcctgcaaagcaaagtagac 84 ||||||||||||||||||||| Sbjct: 115048 atcctgcaaagcaaagtagac 115028
>gb|AC008706.5| Homo sapiens chromosome 5 clone CTB-77M23, complete sequence Length = 164394 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atcctgcaaagcaaagtagac 84 ||||||||||||||||||||| Sbjct: 147118 atcctgcaaagcaaagtagac 147138
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 115621 acgacggcgacggcgacgagc 115641
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctggc 433 |||||||||||||||||||| |||| Sbjct: 25733410 acgacggcgacggcgacgagatggc 25733386 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 27512184 acgacggcgacggcgacgag 27512203 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 1545478 cgacggcgacggcgacgagc 1545497
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 20158492 acgacggcgacggcgacgagc 20158512 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 1583747 ctcgtcgacgacggcgacggcgac 1583770
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gaggagaagggggaggcggtg 209 ||||||||||||||||||||| Sbjct: 24157599 gaggagaagggggaggcggtg 24157579 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 5385893 acgacggcgacggcgacgag 5385912 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cggcgacggcgacgagctgg 432 |||||||||||||||||||| Sbjct: 4343154 cggcgacggcgacgagctgg 4343173
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 26377471 acgacggcgacggcgacgagc 26377491 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 21900920 acgacggcgacggcgacgag 21900939 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 10879812 cgacggcgacggcgacgagc 10879831
>gb|AE004565.1| Pseudomonas aeruginosa PAO1, section 126 of 529 of the complete genome Length = 11579 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 cgtctacgacggcgacggcgacgag 428 |||| |||||||||||||||||||| Sbjct: 3700 cgtcaacgacggcgacggcgacgag 3676
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 cctcgccctcctcaccgtccg 370 ||||||||||||||||||||| Sbjct: 99786 cctcgccctcctcaccgtccg 99806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ggcggaggagtggctcgtct 408 |||||||||||||||||||| Sbjct: 412103 ggcggaggagtggctcgtct 412084
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cggcgacggcgacgagctggc 433 ||||||||||||||||||||| Sbjct: 24795 cggcgacggcgacgagctggc 24815
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gaggagaagggggaggcggtg 209 ||||||||||||||||||||| Sbjct: 91057 gaggagaagggggaggcggtg 91037
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 24278 acgacggcgacggcgacgagc 24298
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgagc 429 ||||||||||||||||||||| Sbjct: 105038 acgacggcgacggcgacgagc 105058
>dbj|AK110310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-B04, full insert sequence Length = 2771 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctggc 433 |||||||||||||||||||| |||| Sbjct: 70 acgacggcgacggcgacgagatggc 46
>dbj|AK107367.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A12, full insert sequence Length = 2205 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctggc 433 |||||||||||||||||||| |||| Sbjct: 91 acgacggcgacggcgacgagatggc 67
>dbj|AK072222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165K20, full insert sequence Length = 1405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cggcgacggcgacgagctggc 433 ||||||||||||||||||||| Sbjct: 210 cggcgacggcgacgagctggc 230
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ggcggaggagaagggggaggcggtg 209 |||||||||||||||| |||||||| Sbjct: 14785 ggcggaggagaaggggaaggcggtg 14809
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctggc 433 |||||||||||||||||||| |||| Sbjct: 25661586 acgacggcgacggcgacgagatggc 25661562 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 27437742 acgacggcgacggcgacgag 27437761 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 1545478 cgacggcgacggcgacgagc 1545497
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctggc 433 |||||||||||||||||||| |||| Sbjct: 100648 acgacggcgacggcgacgagatggc 100624
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcgccctcctcaccgtccg 370 ||||||||||||||||||||| Sbjct: 1812979 cctcgccctcctcaccgtccg 1812959 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ggcggaggagtggctcgtct 408 |||||||||||||||||||| Sbjct: 61783 ggcggaggagtggctcgtct 61764
>ref|XM_479908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 890 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 116 ctcgtcgacgacggcgacggcgac 93
>ref|XM_507112.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.30 mRNA Length = 1003 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 117 ctcgtcgacgacggcgacggcgac 94
>ref|XM_466124.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 221 acgacggcgacggcgacgag 240
>ref|NM_197583.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0064P21.13), mRNA Length = 426 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gacggcgacggcgacgagct 430 |||||||||||||||||||| Sbjct: 205 gacggcgacggcgacgagct 224
>ref|NM_189328.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 tcgtctacgacggcgacggcgacg 426 ||||| |||||||||||||||||| Sbjct: 431 tcgtcgacgacggcgacggcgacg 454
>ref|XM_479419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1951 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cggcggaggagaagggggag 203 |||||||||||||||||||| Sbjct: 228 cggcggaggagaagggggag 209
>ref|NM_189840.2| Oryza sativa (japonica cultivar-group), mRNA Length = 731 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 191 cgacggcgacggcgacgagc 210
>ref|NM_189221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 gtcgccggcgcgatcgctgg 516 |||||||||||||||||||| Sbjct: 661 gtcgccggcgcgatcgctgg 680
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gctgccgtcgatgaccaggg 135 |||||||||||||||||||| Sbjct: 851050 gctgccgtcgatgaccaggg 851031
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcgccctcctcaccgtccgc 371 |||||||||||||||||||| Sbjct: 258984 tcgccctcctcaccgtccgc 258965
>ref|XM_582249.2| PREDICTED: Bos taurus similar to CG10064-PA (LOC505885), partial mRNA Length = 2646 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cagcggcggaggagaagggg 200 |||||||||||||||||||| Sbjct: 1314 cagcggcggaggagaagggg 1333
>ref|XM_844924.1| PREDICTED: Canis familiaris similar to purine rich element binding protein B (LOC608031), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ctacgacggcgacggcgacgagctggcg 434 ||||| |||||||| ||||||||||||| Sbjct: 678 ctacggcggcgacgacgacgagctggcg 705
>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete sequence Length = 195197 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cagcagcttctctggcagta 176 |||||||||||||||||||| Sbjct: 121387 cagcagcttctctggcagta 121368
>ref|XM_391301.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11125.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 acgccgcagcagcttctctggcag 174 ||||||||||||||| |||||||| Sbjct: 1513 acgccgcagcagcttgtctggcag 1490
>ref|XM_800331.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503727.20) partial mRNA Length = 4185 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ttggcggaggagtggctcgt 406 |||||||||||||||||||| Sbjct: 45 ttggcggaggagtggctcgt 64
>ref|XM_816095.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510329.110) partial mRNA Length = 1743 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 aggagaagggggaggcggtgtcgc 213 ||||||||||| |||||||||||| Sbjct: 940 aggagaaggggaaggcggtgtcgc 917
>ref|XM_816169.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506401.80) partial mRNA Length = 4371 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ttggcggaggagtggctcgt 406 |||||||||||||||||||| Sbjct: 225 ttggcggaggagtggctcgt 244
>ref|XM_766247.1| Giardia lamblia ATCC 50803 beta dynein heavy chain (GLP_38_45618_28885) partial mRNA Length = 16734 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 15806 acgacggcgacggcgacgag 15825
>emb|X64557.1|TTGLTXG T.thermophilus gltX gene for glutamyl-tRNA synthetase Length = 2269 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ggcggaggagtggctcgtct 408 |||||||||||||||||||| Sbjct: 1191 ggcggaggagtggctcgtct 1210
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 99318 cgacggcgacggcgacgagc 99299
>ref|XM_970291.1| PREDICTED: Tribolium castaneum similar to CG9291-PB, isoform B (LOC664284), mRNA Length = 613 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tctgctcccgacaaagtccc 486 |||||||||||||||||||| Sbjct: 128 tctgctcccgacaaagtccc 109
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 tcgtctacgacggcgacggc 422 |||||||||||||||||||| Sbjct: 329196 tcgtctacgacggcgacggc 329177
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 tcgtctacgacggcgacggc 422 |||||||||||||||||||| Sbjct: 226374 tcgtctacgacggcgacggc 226355
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 tcgtctacgacggcgacggc 422 |||||||||||||||||||| Sbjct: 211214 tcgtctacgacggcgacggc 211195
>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 6/17 Length = 349071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 aggagaagggggaggcggtg 209 |||||||||||||||||||| Sbjct: 273477 aggagaagggggaggcggtg 273496
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgacagcaacggcaacctcg 285 |||||||||||||||||||| Sbjct: 67003 cgacagcaacggcaacctcg 66984
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tggacgccgacggcctcgcc 356 |||||||||||||||||||| Sbjct: 1598 tggacgccgacggcctcgcc 1579
>gb|AC008749.6| Homo sapiens chromosome 19 clone CTD-2611O12, complete sequence Length = 142439 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggaggagaagggggaggcgg 207 |||||||||||||||||||| Sbjct: 19019 ggaggagaagggggaggcgg 19038
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cggcggaggagaagggggag 203 |||||||||||||||||||| Sbjct: 3231133 cggcggaggagaagggggag 3231114
>gb|AY065576.1| Zea mays clone tac 902.7a 3' Ac insertion site sequence Length = 450 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 367 cgacggcgacggcgacgagc 348
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gacggcgacggcgacgagct 430 |||||||||||||||||||| Sbjct: 16256 gacggcgacggcgacgagct 16237
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gacggcgacggcgacgagct 430 |||||||||||||||||||| Sbjct: 120094 gacggcgacggcgacgagct 120075
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgacagcaacggcaacctcg 285 |||||||||||||||||||| Sbjct: 5090730 cgacagcaacggcaacctcg 5090711
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gacggcgacggcgacgagct 430 |||||||||||||||||||| Sbjct: 20614804 gacggcgacggcgacgagct 20614785
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 20549188 acgacggcgacggcgacgag 20549207 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctgg 432 |||||| ||||||||||||||||| Sbjct: 2772649 acgacgccgacggcgacgagctgg 2772626
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ctacgcccgcggctcgcccc 321 |||||||||||||||||||| Sbjct: 111369 ctacgcccgcggctcgcccc 111350
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 tcgtctacgacggcgacggcgacg 426 ||||| |||||||||||||||||| Sbjct: 68446 tcgtcgacgacggcgacggcgacg 68469
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ctacgcccgcggctcgcccc 321 |||||||||||||||||||| Sbjct: 22461 ctacgcccgcggctcgcccc 22442
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 101125 acgacggcgacggcgacgag 101106
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cggcggaggagaagggggag 203 |||||||||||||||||||| Sbjct: 36162 cggcggaggagaagggggag 36143
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cggcgacggcgacgagctgg 432 |||||||||||||||||||| Sbjct: 34734 cggcgacggcgacgagctgg 34753
>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146F03 Length = 137047 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gtcgccggcgcgatcgctgg 516 |||||||||||||||||||| Sbjct: 112103 gtcgccggcgcgatcgctgg 112084
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0475H04 Length = 143337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gtcgccggcgcgatcgctgg 516 |||||||||||||||||||| Sbjct: 7715 gtcgccggcgcgatcgctgg 7696
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgagctgg 432 |||||| ||||||||||||||||| Sbjct: 40877 acgacgccgacggcgacgagctgg 40854
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 16827 acgacggcgacggcgacgag 16846
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 68908 cgacggcgacggcgacgagc 68927
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 44746 acgacggcgacggcgacgag 44765
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 111235 ctcgtcgacgacggcgacggcgac 111258
>ref|XM_313894.2| Anopheles gambiae str. PEST ENSANGP00000021762 (ENSANGG00000019273), partial mRNA Length = 4206 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tggcagtagtaccagcggcggagg 192 |||||||||| ||||||||||||| Sbjct: 4014 tggcagtagttccagcggcggagg 4037
>dbj|AK108649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-C04, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 465 acgacggcgacggcgacgag 484
>dbj|AK108548.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E01, full insert sequence Length = 890 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 116 ctcgtcgacgacggcgacggcgac 93
>dbj|AK107041.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C03, full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cggcggaggagaagggggag 203 |||||||||||||||||||| Sbjct: 228 cggcggaggagaagggggag 209
>dbj|AK103321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125J05, full insert sequence Length = 1001 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ctcgtctacgacggcgacggcgac 425 |||||| ||||||||||||||||| Sbjct: 117 ctcgtcgacgacggcgacggcgac 94
>dbj|AK101746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061P03, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cgacagcaacggcaacctcg 285 |||||||||||||||||||| Sbjct: 582 cgacagcaacggcaacctcg 601
>dbj|AK062716.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C08, full insert sequence Length = 731 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 191 cgacggcgacggcgacgagc 210
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gacggcgacggcgacgagct 430 |||||||||||||||||||| Sbjct: 20626076 gacggcgacggcgacgagct 20626057
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 88098 acgacggcgacggcgacgag 88117
>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 78611 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acgacggcgacggcgacgag 428 |||||||||||||||||||| Sbjct: 54810 acgacggcgacggcgacgag 54791
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgacggcgacggcgacgagc 429 |||||||||||||||||||| Sbjct: 80254 cgacggcgacggcgacgagc 80235 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,729,764 Number of Sequences: 3902068 Number of extensions: 3729764 Number of successful extensions: 99842 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96251 Number of HSP's gapped (non-prelim): 3585 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
