ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41e12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Plus Query: 11 gcaataagcagcaaccagcagtgcggtacacactctcgatcaactaattctagctgatca 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcaataagcagcaaccagcagtgcggtacacactctcgatcaactaattctagctgatca 60 Query: 71 gccctatagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggtta 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccctatagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggtta 120 Query: 131 gcctgttcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctcc 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcctgttcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctcc 180 Query: 191 aggacttctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgca 250 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggacttctgtgtcgccgaccttgacggcaaagcggtctcagtgaatggtcatccgtgca 240 Query: 251 agcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggca 300 Query: 311 acacgtctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggta 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acacgtctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggta 360 Query: 371 cgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgc 420 Query: 431 cgcacgtccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cgcacgtccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttg 480 Query: 491 gaatcctcggcagccttgactccgggaacaagctctactccagggtggtgc 541 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gaatcctcggcagccttgactccgggaacaagctctactccagggtggtgc 531
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 583 bits (294), Expect = e-163 Identities = 468/525 (89%), Gaps = 2/525 (0%) Strand = Plus / Plus Query: 17 agcagcaaccagcagtgcggtacacactctcgatcaactaattctagctgatcagcccta 76 ||||||||||| |||||| | | ||||| ||||||| || ||||||||| ||| ||| Sbjct: 3 agcagcaaccaccagtgcctcaaagactcttgatcaacaaactctagctgaccagtgcta 62 Query: 77 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 136 |||||||||| |||||||||||||||||||||||| |||| |||||||| | |||||| Sbjct: 63 --gctaagcttgctgcatagcaagcaatggggtactctaaaaacctagcggctggcctgt 120 Query: 137 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 196 ||||| ||||| |||| || ||||||||||||||||||||||| || ||||| ||||||| Sbjct: 121 tcgccatgctgttcctagctccggccgtcctggcatccgaccccgatcctcttcaggact 180 Query: 197 tctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 256 ||||||| |||| ||| || |||| || ||||| ||||| || ||||| |||||||||| Sbjct: 181 tctgtgttgccgacctcgatggcagggcagtctcggtgaacgggcatccatgcaagccca 240 Query: 257 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 316 |||||||||| || || |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 241 tgtcggaggctggtgacgacttcctcttctcgtccaagctggccaaggccggcaacacgt 300 Query: 317 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 376 | ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 ccaccccgaatggctcggccgtgacggagctcgacgtggccgagtggcccggtacgaaca 360 Query: 377 cgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacg 436 ||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 361 cgctgggtgtgtccatgaaccgtgtggacttcgcgccgggaggcaccaacccgccgcacg 420 Query: 437 tccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcc 496 ||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 421 tccacccgcgtgggaccgagatcggcatggtgatgaaaggtgagctcctcgttggaatcc 480 Query: 497 tcggcagccttgactccgggaacaagctctactccagggtggtgc 541 |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 481 tcggcagcctcgactccggaaacaagctctactccagggtggtgc 525
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 573 bits (289), Expect = e-160 Identities = 421/465 (90%) Strand = Plus / Plus Query: 77 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 136 |||||||||||| | |||||||||||||||| ||||| |||| ||||| || | |||||| Sbjct: 67 tagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctggcctgt 126 Query: 137 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 196 || || ||||||||||||| |||||| || |||| |||||||||||||||| ||||||| Sbjct: 127 tcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacaggact 186 Query: 197 tctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 256 |||| ||||| | ||| || ||||| |||||||| ||||| || ||| |||| ||||||| Sbjct: 187 tctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagccca 246 Query: 257 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 316 |||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||| Sbjct: 247 tgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaacacgt 306 Query: 317 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 376 | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 307 ccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacgaaca 366 Query: 377 cgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacg 436 ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 367 cgctgggcgtgtccatgaaccgtgtggacttcgcgccgggcggcaccaacccgccgcaca 426 Query: 437 tccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcc 496 ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 427 tccacccgcgtgcaaccgagatcggcatggtgatgaaaggtgagctcctcgttggaatcc 486 Query: 497 tcggcagccttgactccgggaacaagctctactccagggtggtgc 541 |||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 487 tcggcagctttgactccggaaacaagctctactccagggtggtgc 531
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 545 bits (275), Expect = e-152 Identities = 398/439 (90%) Strand = Plus / Plus Query: 103 atggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggcc 162 |||||||||||||||||||||| | | ||||||| ||| ||||||||| || || | | Sbjct: 1 atggggtactccaaaaccctagtagctggcctgtttgccacgctgctcctagctccagtc 60 Query: 163 gtcctggcatccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaaa 222 |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 61 gtcctggctaccgaccctgaccctctccaggacttctgtgtcgccgacctcgacggcaag 120 Query: 223 gcggtctcagtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttcctt 282 |||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 121 gcggtctcggtgaacgggcatccgtgcaagcccatgtcgaaggccggcgatgacttcctc 180 Query: 283 ttctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcggccgtgacg 342 |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 181 ttctcgtccaagctggccaaggctggcaacacgtcgaccccgaacggctcggccgtgacg 240 Query: 343 gagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtg 402 ||||| ||||||||||||||||| || ||||||||| |||||||||| ||||| || ||| Sbjct: 241 gagcttgacgtggctgagtggcctggaacgaacacgttgggcgtgtcgatgaaccgcgtg 300 Query: 403 gacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagataggc 462 |||||||| || || |||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 301 gacttcgctccaggaggcaccaacccgccgcacatccacccccgtgccaccgagatcggc 360 Query: 463 atcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaag 522 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 361 atcgtgatgaaaggtgagctcctcgtgggaatcctcggcagcctcgactccgggaacaag 420 Query: 523 ctctactccagggtggtgc 541 || ||||| |||||||||| Sbjct: 421 ctttactcgagggtggtgc 439
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 527 bits (266), Expect = e-146 Identities = 462/525 (88%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 17 agcagcaaccagcagtgcggtacacactctcgatcaactaattctagctgatcagcccta 76 ||||||||| | |||||| || |||||||| |||||| || |||||||||||| |||| Sbjct: 3 agcagcaacaaccagtgccatagacactctccatcaacaaactctagctgatcaatccta 62 Query: 77 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 136 ||||||||| || ||||||||||| ||||||||||||||||||||| | | |||||| Sbjct: 63 --gctaagcttattacatagcaagca-tggggtactccaaaaccctagtagctggcctgt 119 Query: 137 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 196 |||| ||||| | || || ||||||||| |||| ||||||| |||||||||||||||| Sbjct: 120 tcgcaatgctgttactagctccggccgtcttggccaccgacccagaccctctccaggact 179 Query: 197 tctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 256 |||||||||||| ||| |||||||| |||||||| ||||| || || |||||||||||| Sbjct: 180 tctgtgtcgccgacctcgacggcaaggcggtctcggtgaacgggcacacgtgcaagccca 239 Query: 257 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 316 |||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||| Sbjct: 240 tgtcggaggccggcgacgacttcctcttctcgtccaagttggccaaggccggcaacacgt 299 Query: 317 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 376 | ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 300 ccaccccgaacggctccgccgtgacggagctcgacgtggccgagtggcccggtaccaaca 359 Query: 377 cgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacg 436 ||||||| ||||||||||| || |||||||| || || || ||||||||||| || ||| Sbjct: 360 cgctgggtgtgtccatgaaccgcgtggactttgctcccggaggcaccaacccaccacaca 419 Query: 437 tccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcc 496 ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct: 420 tccacccgcgtgccaccgagatcggcatcgtgatgaaaggtgagcttctcgtgggaatcc 479 Query: 497 tcggcagccttgactccgggaacaagctctactccagggtggtgc 541 | |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 480 ttggcagcctcgactccgggaacaagctctactcgagggtggtgc 524
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 527 bits (266), Expect = e-146 Identities = 462/525 (88%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 17 agcagcaaccagcagtgcggtacacactctcgatcaactaattctagctgatcagcccta 76 ||||||||| | |||||| || |||||||| |||||| || |||||||||||| |||| Sbjct: 1716 agcagcaacaaccagtgccatagacactctccatcaacaaactctagctgatcaatccta 1775 Query: 77 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 136 ||||||||| || ||||||||||| ||||||||||||||||||||| | | |||||| Sbjct: 1776 --gctaagcttattacatagcaagca-tggggtactccaaaaccctagtagctggcctgt 1832 Query: 137 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 196 |||| ||||| | || || ||||||||| |||| ||||||| |||||||||||||||| Sbjct: 1833 tcgcaatgctgttactagctccggccgtcttggccaccgacccagaccctctccaggact 1892 Query: 197 tctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 256 |||||||||||| ||| |||||||| |||||||| ||||| || || |||||||||||| Sbjct: 1893 tctgtgtcgccgacctcgacggcaaggcggtctcggtgaacgggcacacgtgcaagccca 1952 Query: 257 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 316 |||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||| Sbjct: 1953 tgtcggaggccggcgacgacttcctcttctcgtccaagttggccaaggccggcaacacgt 2012 Query: 317 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 376 | ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2013 ccaccccgaacggctccgccgtgacggagctcgacgtggccgagtggcccggtaccaaca 2072 Query: 377 cgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacg 436 ||||||| ||||||||||| || |||||||| || || || ||||||||||| || ||| Sbjct: 2073 cgctgggtgtgtccatgaaccgcgtggactttgctcccggaggcaccaacccaccacaca 2132 Query: 437 tccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcc 496 ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct: 2133 tccacccgcgtgccaccgagatcggcatcgtgatgaaaggtgagcttctcgtgggaatcc 2192 Query: 497 tcggcagccttgactccgggaacaagctctactccagggtggtgc 541 | |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2193 ttggcagcctcgactccgggaacaagctctactcgagggtggtgc 2237
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 525 bits (265), Expect = e-146 Identities = 442/500 (88%), Gaps = 2/500 (0%) Strand = Plus / Plus Query: 42 actctcgatcaactaattctagctgatcagccctatagctaagcttgttgcatagcaagc 101 ||||| ||||||| || ||||||||||||| ||| |||||||||| | |||||||||| Sbjct: 1 actcttgatcaacaaactctagctgatcagtgcta--gctaagcttgctacatagcaagc 58 Query: 102 aatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggc 161 ||||| |||||||||| ||||| || | ||||||| | | ||||||||||||| |||| Sbjct: 59 catgggttactccaaaaacctaggggctggcctgtttggcatgctgctccttgctccggg 118 Query: 162 cgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaa 221 ||||||||| ||||||||||||||||||||||||||||| || || | ||| |||||||| Sbjct: 119 cgtcctggcctccgaccctgaccctctccaggacttctgcgttgctgacctcgacggcaa 178 Query: 222 agcggtctcagtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttcct 281 |||||||| ||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 179 ggcggtctctgtgaacgggcatccatgcaagcctatgtcggaggccggtgacgacttcct 238 Query: 282 tttctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcggccgtgac 341 |||||||| |||||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 239 cttctcgtccaagctggccaaggctggcaacacgtccaccccgaatggctctgctgtgac 298 Query: 342 ggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggt 401 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || || Sbjct: 299 ggagctcgacgtggccgagtggcccggtacgaacacgttgggcgtgtccatgaaccgcgt 358 Query: 402 ggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagatagg 461 ||||||||| || ||||||||||||||||||||| ||||||| || || ||||| || || Sbjct: 359 ggacttcgcaccagggggcaccaacccgccgcacatccacccgcgcgctaccgacattgg 418 Query: 462 catcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaa 521 ||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 419 catcgtgttgaaaggtgagctcctcgttggtatcctcggcagcctcgactctgggaacaa 478 Query: 522 gctctactccagggtggtgc 541 |||||||||||||||||||| Sbjct: 479 gctctactccagggtggtgc 498
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 511 bits (258), Expect = e-142 Identities = 342/370 (92%) Strand = Plus / Plus Query: 172 tccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaaagcggtctca 231 |||||||| ||||| |||||||||||||| ||||| | ||| || ||||| |||||||| Sbjct: 1 tccgacccagacccactccaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 60 Query: 232 gtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttccttttctcgtca 291 ||||| || ||| |||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 61 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 120 Query: 292 aagctggccaaggccggcaacacgtctacccccaacggctcggccgtgacggagctcgac 351 |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 121 aagctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcgac 180 Query: 352 gtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtggacttcgcg 411 ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 181 gtggccgagtggcccggtacgaacacgctgggcgtgtccatgaaccgtgtggacttcgcg 240 Query: 412 ccggggggcaccaacccgccgcacgtccacccccgtgccaccgagataggcatcgtgatg 471 |||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||| Sbjct: 241 ccggggggcaccaacccgccgcacatccacccgcgtgcaaccgagatcggcatggtgatg 300 Query: 472 aaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaagctctactcc 531 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 301 aaaggtgagctcctcgttggaatcctcggcagccttgactccggaaacaagctctactcc 360 Query: 532 agggtggtgc 541 |||||||||| Sbjct: 361 agggtggtgc 370
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 454 bits (229), Expect = e-124 Identities = 406/465 (87%) Strand = Plus / Plus Query: 77 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 136 ||||||||| || |||||||||||||||||||||||| |||| | ||||| || ||| Sbjct: 1292 tagctaagcgtgctgcatagcaagcaatggggtactctaaaaacatagcgtccggcatgt 1351 Query: 137 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 196 | ||| ||||||||||||| | ||||||||| | ||| ||||| ||||||||||||||| Sbjct: 1352 ttgccatgctgctccttgcttcagccgtcctgtcctccaaccctcaccctctccaggact 1411 Query: 197 tctgtgtcgccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 256 |||||||||||| ||| || ||||| |||||||| ||||| || || ||||||||||| Sbjct: 1412 tctgtgtcgccgacctcgatggcaaggcggtctcggtgaacgggcacatgtgcaagccca 1471 Query: 257 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 316 |||||||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| | Sbjct: 1472 tgtcggaggccggcgacgacttcctcttctcttccaagcttgccaaggccggcaacacat 1531 Query: 317 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 376 | ||||| |||||||| || |||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 1532 ccaccccgaacggctccgctgtgacggatctcaacgtggccgagtggcctggtacgaaca 1591 Query: 377 cgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacg 436 | ||||| ||||||||||| || |||||||| || || |||||||||||||| |||||| Sbjct: 1592 cactgggtgtgtccatgaaccgtgtggactttgcaccagggggcaccaacccaccgcaca 1651 Query: 437 tccacccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcc 496 ||||||| || ||||| ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1652 tccacccgcgcgccactgagatcggcatcgtgatgaaaggtgagctcctcgttggtatcc 1711 Query: 497 tcggcagccttgactccgggaacaagctctactccagggtggtgc 541 |||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1712 tcggcagcctcgactctgggaacaagctctactccagggtggtgc 1756
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 365 bits (184), Expect = 1e-97 Identities = 247/268 (92%) Strand = Plus / Plus Query: 274 gacttccttttctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcg 333 |||||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 3 gacttcctcttctcatccaagctggccaaggctggcaacacgtcgaccccaaacggctcg 62 Query: 334 gccgtgacggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatg 393 |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||| Sbjct: 63 accgtgacggagctcgacgtggccgagtggcccggaacgaacacgttgggcgtgtctatg 122 Query: 394 aatcgggtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccacc 453 || || ||||||||||| | |||||||||||||||||||||| |||| |||||||||||| Sbjct: 123 aaccgcgtggacttcgcactggggggcaccaacccgccgcacatccatccccgtgccacc 182 Query: 454 gagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactcc 513 ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 183 gagatcggcatcgtgatgaaaggtgagctccttgttggaatccttggcagccttgagtcc 242 Query: 514 gggaacaagctctactccagggtggtgc 541 |||||||||||||||||||||||||||| Sbjct: 243 gggaacaagctctactccagggtggtgc 270
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 301 bits (152), Expect = 1e-78 Identities = 365/436 (83%) Strand = Plus / Plus Query: 102 aatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggc 161 ||||| ||||| |||||||||||||| | |||| |||||| |||| ||||||| || Sbjct: 102 aatggcgtacttcaaaaccctagcggctggcctcttcgccttgctattccttgctccatt 161 Query: 162 cgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaa 221 || |||| |||| || ||||| || ||||| || || || || | |||||| ||||| Sbjct: 162 tatcatggccaccgatccggacccacttcaggatttttgcgtggctgaccttgatggcaa 221 Query: 222 agcggtctcagtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttcct 281 | ||| || ||||| || || || |||||||||||||| |||||||||||||||||||| Sbjct: 222 ggaggtgtccgtgaacgggcacccatgcaagcccatgtcagaggccggcgatgacttcct 281 Query: 282 tttctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcggccgtgac 341 ||||| || ||||| || |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 282 cttctcctccaagctcgctaaggccggcaacacctctaccccgaacggctcggccgtgac 341 Query: 342 ggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggt 401 ||||| || ||||| |||||||||||||| |||||||| ||| |||| ||||| || || Sbjct: 342 agagctggatgtggcagagtggcccggtaccaacacgctaggcatgtctatgaaccgcgt 401 Query: 402 ggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagatagg 461 ||||||||||| || ||||| |||||||||||| ||||||| |||||||| ||||| || Sbjct: 402 cgacttcgcgcctggaggcacaaacccgccgcacatccacccacgtgccactgagattgg 461 Query: 462 catcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaa 521 |||||| ||||||||||||||||||||||| ||| |||| ||||| ||||| || ||||| Sbjct: 462 catcgtcatgaaaggtgagctcctcgttggcatcatcggtagcctcgactctggaaacaa 521 Query: 522 gctctactccagggtg 537 |||||| |||| |||| Sbjct: 522 gctctattccaaggtg 537
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 295 bits (149), Expect = 8e-77 Identities = 326/385 (84%) Strand = Plus / Plus Query: 146 tgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcg 205 |||||||||| || || ||||||| |||||||||| ||| | ||||||||||| || | Sbjct: 41 tgctccttgctccatccatcctggccaccgaccctgatcctttgcaggacttctgcgttg 100 Query: 206 ccggccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagcccatgtcggagg 265 | | ||| ||||||| ||| |||||||||| || || || ||||||||||||||||||| Sbjct: 101 ctgacctcaacggcaaggcgatctcagtgaacgggcacccttgcaagcccatgtcggagg 160 Query: 266 ccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgtctaccccca 325 | |||||||||||||| ||||| || |||||||| | ||| ||||||||||| || || | Sbjct: 161 caggcgatgacttcctcttctcatccaagctggcaatggctggcaacacgtcgacaccga 220 Query: 326 acggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgctgggcg 385 | || |||||||| || ||||| || || || |||||||||| || ||||||||||| | Sbjct: 221 atggatcggccgtcacagagctagatgttgcacagtggcccggcaccaacacgctgggtg 280 Query: 386 tgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtccaccccc 445 |||||| |||||| || |||||||| || ||||||||||||||||||||| ||||||| | Sbjct: 281 tgtccacgaatcgtgttgacttcgcaccagggggcaccaacccgccgcacatccacccac 340 Query: 446 gtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagcc 505 ||||||||||||| |||||||||||||||||||||||||| || || ||| | ||||||| Sbjct: 341 gtgccaccgagattggcatcgtgatgaaaggtgagctcctagtcggcatcattggcagcc 400 Query: 506 ttgactccgggaacaagctctactc 530 | |||||||| ||||| |||||||| Sbjct: 401 tcgactccggtaacaaactctactc 425
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 281 bits (142), Expect = 1e-72 Identities = 316/374 (84%) Strand = Plus / Plus Query: 164 tcctggcatccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaaag 223 ||||||| |||||||||| || || ||||||||||| ||||||| ||| || || || | Sbjct: 59 tcctggccaccgaccctgatcccctgcaggacttctgcgtcgccgacctggatggaaagg 118 Query: 224 cggtctcagtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttccttt 283 || |||||||||| || || | |||||||||||||| ||||| ||||| |||||||| | Sbjct: 119 cgatctcagtgaacgggcacgcatgcaagcccatgtccgaggcaggcgaagacttcctct 178 Query: 284 tctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcggccgtgacgg 343 |||| || |||||||| | ||||||||||||||| || || ||||| || |||||||| | Sbjct: 179 tctcatccaagctggcaatggccggcaacacgtccacgccgaacggatcagccgtgacag 238 Query: 344 agctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtgg 403 |||| || || || || |||||||| || ||||| || |||||||||||||| || || | Sbjct: 239 agcttgatgtagcagaatggcccggcaccaacacacttggcgtgtccatgaaccgtgtcg 298 Query: 404 acttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagataggca 463 ||||||||||||| || || ||||| |||||| ||||||| ||||| |||||||| |||| Sbjct: 299 acttcgcgccgggtggtacgaacccaccgcacatccacccgcgtgctaccgagattggca 358 Query: 464 tcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaagc 523 ||||||||||||||||||| ||||| |||||| |||||||||| ||||| |||||||||| Sbjct: 359 tcgtgatgaaaggtgagcttctcgtcggaatcatcggcagcctcgactctgggaacaagc 418 Query: 524 tctactccagggtg 537 | ||||||| |||| Sbjct: 419 tatactccaaggtg 432
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 266 bits (134), Expect = 7e-68 Identities = 314/374 (83%) Strand = Plus / Plus Query: 164 tcctggcatccgaccctgaccctctccaggacttctgtgtcgccggccttgacggcaaag 223 ||||||| |||||||||| || || ||||||||||| ||||||| ||| || || || | Sbjct: 59 tcctggccaccgaccctgatcccctgcaggacttctgcgtcgccgacctggatggaaagg 118 Query: 224 cggtctcagtgaatggtcatccgtgcaagcccatgtcggaggccggcgatgacttccttt 283 || |||||||||| || || | |||||||||||||| ||||| ||||| |||||||| | Sbjct: 119 cgatctcagtgaacgggcacacatgcaagcccatgtccgaggcaggcgaagacttcctct 178 Query: 284 tctcgtcaaagctggccaaggccggcaacacgtctacccccaacggctcggccgtgacgg 343 |||| || |||||||| | |||||||||||||| || || ||||| || |||||||| | Sbjct: 179 tctcatccaagctggcaatggccggcaacacgttcacgccgaacggatcagccgtgacag 238 Query: 344 agctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtgg 403 |||| || || | || |||||||| || ||||| || |||||||||||||| || || | Sbjct: 239 agcttgatgtaacagaatggcccggcaccaacacacttggcgtgtccatgaaccgtgtcg 298 Query: 404 acttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagataggca 463 ||||||||| ||| |||||||||||||| ||| ||||||| || || |||||||| |||| Sbjct: 299 acttcgcgcggggtggcaccaacccgccacacatccacccgcgcgctaccgagattggca 358 Query: 464 tcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaacaagc 523 ||||||||||||||||||| ||||| |||||| |||||||||| ||||| |||||||||| Sbjct: 359 tcgtgatgaaaggtgagcttctcgtcggaatcatcggcagcctcgactctgggaacaagc 418 Query: 524 tctactccagggtg 537 | ||||||| |||| Sbjct: 419 tatactccaaggtg 432
>gb|AY864922.1| Triticum aestivum strain Yumai 18 germin-like protein 3 gene, promoter region, 5' UTR and partial cds Length = 1853 Score = 161 bits (81), Expect = 3e-36 Identities = 141/160 (88%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 41 cactctcgatcaactaattctagctgatcagccctatagctaagcttgttgcatagcaag 100 |||||| ||||||| || ||||||||||||| ||| |||||||||| | ||||||||| Sbjct: 1689 cactcttgatcaacaaactctagctgatcagtgcta--gctaagcttgctacatagcaag 1746 Query: 101 caatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccgg 160 | ||||| |||||||||| ||||| || | ||||||| ||| ||||||||||||| |||| Sbjct: 1747 ccatgggttactccaaaaacctaggggctggcctgtttgccatgctgctccttgctccgg 1806 Query: 161 ccgtcctggcatccgaccctgaccctctccaggacttctg 200 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1807 ccgtcctggcctccgaccctgaccctctccaggacttctg 1846
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Plus Query: 321 ccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgct 380 |||||||||||| ||| ||| |||||||||| || | ||||||||| ||||||||| Sbjct: 228 ccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgct 287 Query: 381 gggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtcca 440 |||||||||||||| || | ||||||||||| || ||||||||||||||||||||||| Sbjct: 288 cggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtcca 347 Query: 441 cccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcgg 500 ||| || ||||||||| | ||||||||| | || ||||||||||| || ||| |||| Sbjct: 348 cccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcgg 407 Query: 501 cagccttgactccgggaacaagctctactccagggtggt 539 |||||| ||| ||||||||| | ||||||||||||||| Sbjct: 408 cagcctcgacaccgggaacaggtactactccagggtggt 446 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 174 cgaccctgaccctctccaggacttctgtgtcgccg 208 |||||||||||||||||| |||||||| ||||||| Sbjct: 81 cgaccctgaccctctccaagacttctgcgtcgccg 115
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Minus Query: 321 ccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgct 380 |||||||||||| ||| ||| |||||||||| || | ||||||||| ||||||||| Sbjct: 27488384 ccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgct 27488325 Query: 381 gggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtcca 440 |||||||||||||| || | ||||||||||| || ||||||||||||||||||||||| Sbjct: 27488324 cggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtcca 27488265 Query: 441 cccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcgg 500 ||| || ||||||||| | ||||||||| | || ||||||||||| || ||| |||| Sbjct: 27488264 cccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcgg 27488205 Query: 501 cagccttgactccgggaacaagctctactccagggtggt 539 |||||| ||| ||||||||| | ||||||||||||||| Sbjct: 27488204 cagcctcgacaccgggaacaggtactactccagggtggt 27488166 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 27500289 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 27500230 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 27500229 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 27500170 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 27500169 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 27500110 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 27500109 aggtactactccaaggtggt 27500090 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 27497308 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 27497249 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 27497248 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 27497189 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 27497188 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 27497129 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 27497128 aggtactactccaaggtggt 27497109 Score = 121 bits (61), Expect = 3e-24 Identities = 236/292 (80%), Gaps = 8/292 (2%) Strand = Plus / Minus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaaagcggtctcagtgaatggt 240 |||||||||||||||||||| ||||||| ||| ||| |||| |||| | ||||| || Sbjct: 27493128 gaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacggtgaacggg 27493072 Query: 241 catccgtgcaagcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggcc 300 || |||||||||| |||| ||||||||| || ||||| |||||||| ||| | ||| Sbjct: 27493071 cacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtctaagatagcc 27493012 Query: 301 aaggccggcaac----acgtctacccccaacggctcggccgtgacggagctcgacgtggc 356 | || |||| || ||| | | ||| |||||||| ||| |||||||||||||| || Sbjct: 27493011 acgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagctcgacgtcgc 27492953 Query: 357 tgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggg 416 ||||||||||| |||||||| |||||||||||||| || || ||||||||||| || Sbjct: 27492952 cgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgcgtcgacttcgcgcccgg 27492893 Query: 417 gggcaccaacccgccgcacgtccacccccgtgccaccgagataggcatcgtg 468 |||||||||||||||||||||||||| || ||||| ||| | ||||||||| Sbjct: 27492892 cggcaccaacccgccgcacgtccacccgcgcgccactgaggtcggcatcgtg 27492841 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 174 cgaccctgaccctctccaggacttctgtgtcgccg 208 |||||||||||||||||| |||||||| ||||||| Sbjct: 27488531 cgaccctgaccctctccaagacttctgcgtcgccg 27488497 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaa 221 |||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 27500448 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27500408
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Minus Query: 321 ccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgct 380 |||||||||||| ||| ||| |||||||||| || | ||||||||| ||||||||| Sbjct: 27579707 ccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgct 27579648 Query: 381 gggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtcca 440 |||||||||||||| || | ||||||||||| || ||||||||||||||||||||||| Sbjct: 27579647 cggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtcca 27579588 Query: 441 cccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcgg 500 ||| || ||||||||| | ||||||||| | || ||||||||||| || ||| |||| Sbjct: 27579587 cccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcgg 27579528 Query: 501 cagccttgactccgggaacaagctctactccagggtggt 539 |||||| ||| ||||||||| | ||||||||||||||| Sbjct: 27579527 cagcctcgacaccgggaacaggtactactccagggtggt 27579489 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 27591612 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 27591553 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 27591552 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 27591493 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 27591492 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 27591433 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 27591432 aggtactactccaaggtggt 27591413 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Minus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 27588631 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 27588572 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 27588571 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 27588512 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 27588511 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 27588452 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 27588451 aggtactactccaaggtggt 27588432 Score = 121 bits (61), Expect = 3e-24 Identities = 236/292 (80%), Gaps = 8/292 (2%) Strand = Plus / Minus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaaagcggtctcagtgaatggt 240 |||||||||||||||||||| ||||||| ||| ||| |||| |||| | ||||| || Sbjct: 27584451 gaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacggtgaacggg 27584395 Query: 241 catccgtgcaagcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggcc 300 || |||||||||| |||| ||||||||| || ||||| |||||||| ||| | ||| Sbjct: 27584394 cacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtctaagatagcc 27584335 Query: 301 aaggccggcaac----acgtctacccccaacggctcggccgtgacggagctcgacgtggc 356 | || |||| || ||| | | ||| |||||||| ||| |||||||||||||| || Sbjct: 27584334 acgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagctcgacgtcgc 27584276 Query: 357 tgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggg 416 ||||||||||| |||||||| |||||||||||||| || || ||||||||||| || Sbjct: 27584275 cgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgcgtcgacttcgcgcccgg 27584216 Query: 417 gggcaccaacccgccgcacgtccacccccgtgccaccgagataggcatcgtg 468 |||||||||||||||||||||||||| || ||||| ||| | ||||||||| Sbjct: 27584215 cggcaccaacccgccgcacgtccacccgcgcgccactgaggtcggcatcgtg 27584164 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 174 cgaccctgaccctctccaggacttctgtgtcgccg 208 |||||||||||||||||| |||||||| ||||||| Sbjct: 27579854 cgaccctgaccctctccaagacttctgcgtcgccg 27579820 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaa 221 |||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 27591771 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27591731
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Plus Query: 321 ccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgct 380 |||||||||||| ||| ||| |||||||||| || | ||||||||| ||||||||| Sbjct: 62130 ccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgct 62189 Query: 381 gggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtcca 440 |||||||||||||| || | ||||||||||| || ||||||||||||||||||||||| Sbjct: 62190 cggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtcca 62249 Query: 441 cccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcgg 500 ||| || ||||||||| | ||||||||| | || ||||||||||| || ||| |||| Sbjct: 62250 cccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcgg 62309 Query: 501 cagccttgactccgggaacaagctctactccagggtggt 539 |||||| ||| ||||||||| | ||||||||||||||| Sbjct: 62310 cagcctcgacaccgggaacaggtactactccagggtggt 62348 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Plus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 53206 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 53265 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 53266 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 53325 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 53326 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 53385 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 53386 aggtactactccaaggtggt 53405 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Plus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 50225 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 50284 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 50285 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 50344 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 50345 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 50404 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 50405 aggtactactccaaggtggt 50424 Score = 121 bits (61), Expect = 3e-24 Identities = 236/292 (80%), Gaps = 8/292 (2%) Strand = Plus / Plus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaaagcggtctcagtgaatggt 240 |||||||||||||||||||| ||||||| ||| ||| |||| |||| | ||||| || Sbjct: 57386 gaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacggtgaacggg 57442 Query: 241 catccgtgcaagcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggcc 300 || |||||||||| |||| ||||||||| || ||||| |||||||| ||| | ||| Sbjct: 57443 cacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtctaagatagcc 57502 Query: 301 aaggccggcaac----acgtctacccccaacggctcggccgtgacggagctcgacgtggc 356 | || |||| || ||| | | ||| |||||||| ||| |||||||||||||| || Sbjct: 57503 acgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagctcgacgtcgc 57561 Query: 357 tgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggg 416 ||||||||||| |||||||| |||||||||||||| || || ||||||||||| || Sbjct: 57562 cgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgcgtcgacttcgcgcccgg 57621 Query: 417 gggcaccaacccgccgcacgtccacccccgtgccaccgagataggcatcgtg 468 |||||||||||||||||||||||||| || ||||| ||| | ||||||||| Sbjct: 57622 cggcaccaacccgccgcacgtccacccgcgcgccactgaggtcggcatcgtg 57673 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 174 cgaccctgaccctctccaggacttctgtgtcgccg 208 |||||||||||||||||| |||||||| ||||||| Sbjct: 61983 cgaccctgaccctctccaagacttctgcgtcgccg 62017 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaa 221 |||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 50066 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 50106
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Plus Query: 321 ccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaacacgct 380 |||||||||||| ||| ||| |||||||||| || | ||||||||| ||||||||| Sbjct: 354 ccccaacggctccaacgtcacgcagctcgacgtcgcggggtggcccggggtgaacacgct 413 Query: 381 gggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccgcacgtcca 440 |||||||||||||| || | ||||||||||| || ||||||||||||||||||||||| Sbjct: 414 cggcgtgtccatgaaccgcatcgacttcgcgcccggcggcaccaacccgccgcacgtcca 473 Query: 441 cccccgtgccaccgagataggcatcgtgatgaaaggtgagctcctcgttggaatcctcgg 500 ||| || ||||||||| | ||||||||| | || ||||||||||| || ||| |||| Sbjct: 474 cccgcgcgccaccgaggtcggcatcgtgctacgcggcgagctcctcgtcggcatcatcgg 533 Query: 501 cagccttgactccgggaacaagctctactccagggtggt 539 |||||| ||| ||||||||| | ||||||||||||||| Sbjct: 534 cagcctcgacaccgggaacaggtactactccagggtggt 572 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 174 cgaccctgaccctctccaggacttctgtgtcgccg 208 |||||||||||||||||| |||||||| ||||||| Sbjct: 207 cgaccctgaccctctccaagacttctgcgtcgccg 241
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Plus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 389 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 448 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 449 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 508 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 509 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 568 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 569 aggtactactccaaggtggt 588 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaa 221 |||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 230 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 270
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Plus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 247 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 306 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 307 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 366 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 367 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 426 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 427 aggtactactccaaggtggt 446
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 143 bits (72), Expect = 7e-31 Identities = 168/200 (84%) Strand = Plus / Plus Query: 340 acggagctcgacgtggctgagtggcccggtacgaacacgctgggcgtgtccatgaatcgg 399 |||||||||||||| || ||||||||||| |||||||| |||||||||||||| || Sbjct: 400 acggagctcgacgtcgccgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgc 459 Query: 400 gtggacttcgcgccggggggcaccaacccgccgcacgtccacccccgtgccaccgagata 459 || ||||||||||| || |||||||||||||||||||||||||| || ||||||||| | Sbjct: 460 gtcgacttcgcgcccggtggcaccaacccgccgcacgtccacccgcgcgccaccgaggtc 519 Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||||||| | || ||||||||||| || ||| |||||| ||| ||| |||||||| Sbjct: 520 ggcatcgtgctccgcggcgagctcctcgtcggcatcatcggcaccctcgacaccgggaac 579 Query: 520 aagctctactccagggtggt 539 | | |||||||| |||||| Sbjct: 580 aggtactactccaaggtggt 599 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaa 221 |||||||||||||||||||| ||||||| ||| ||| |||| Sbjct: 241 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 281
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 121 bits (61), Expect = 3e-24 Identities = 236/292 (80%), Gaps = 8/292 (2%) Strand = Plus / Plus Query: 181 gaccctctccaggacttctgtgtcgccggccttgacggcaaagcggtctcagtgaatggt 240 |||||||||||||||||||| ||||||| ||| ||| |||| |||| | ||||| || Sbjct: 94 gaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacggtgaacggg 150 Query: 241 catccgtgcaagcccatgtcggaggccggcgatgacttccttttctcgtcaaagctggcc 300 || |||||||||| |||| ||||||||| || ||||| |||||||| ||| | ||| Sbjct: 151 cacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtctaagatagcc 210 Query: 301 aaggccggcaac----acgtctacccccaacggctcggccgtgacggagctcgacgtggc 356 | || |||| || ||| | | ||| |||||||| ||| |||||||||||||| || Sbjct: 211 acgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagctcgacgtcgc 269 Query: 357 tgagtggcccggtacgaacacgctgggcgtgtccatgaatcgggtggacttcgcgccggg 416 ||||||||||| |||||||| |||||||||||||| || || ||||||||||| || Sbjct: 270 cgagtggcccggcgtcaacacgctcggcgtgtccatgaaccgcgtcgacttcgcgcccgg 329 Query: 417 gggcaccaacccgccgcacgtccacccccgtgccaccgagataggcatcgtg 468 |||||||||||||||||||||||||| || ||||| ||| | ||||||||| Sbjct: 330 cggcaccaacccgccgcacgtccacccgcgcgccactgaggtcggcatcgtg 381
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 460 ggcatcgtgatgaaaggtgagctcctcgttggaatcctcggcagccttgactccgggaac 519 ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 4 ggcatggtgatgaaaggtgagctcctcgttggaatcctcggaagcctcgactccggaaac 63 Query: 520 aagctctactccagggtggtg 540 ||||||||||| ||||||||| Sbjct: 64 aagctctactctagggtggtg 84
>ref|NM_189765.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 372 gaacacgctgggcgtgtccatgaatcgggtggacttcgcgcc---ggggggcaccaaccc 428 |||||||||||||||||||||| || || |||| |||||| ||| ||| ||||||| Sbjct: 294 gaacacgctgggcgtgtccatggcgcgcgtcgactacgcgccgtggggcggcgccaaccc 353 Query: 429 gccgcacgtccacccccgtgccaccgagat 458 ||||||| |||||| || ||||||||||| Sbjct: 354 gccgcactcccacccgcgcgccaccgagat 383
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 372 gaacacgctgggcgtgtccatgaatcgggtggacttcgcgcc---ggggggcaccaaccc 428 |||||||||||||||||||||| || || |||| |||||| ||| ||| ||||||| Sbjct: 41910804 gaacacgctgggcgtgtccatggcgcgcgtcgactacgcgccgtggggcggcgccaaccc 41910863 Query: 429 gccgcacgtccacccccgtgccaccgagat 458 ||||||| |||||| || ||||||||||| Sbjct: 41910864 gccgcactcccacccgcgcgccaccgagat 41910893
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 372 gaacacgctgggcgtgtccatgaatcgggtggacttcgcgcc---ggggggcaccaaccc 428 |||||||||||||||||||||| || || |||| |||||| ||| ||| ||||||| Sbjct: 12881 gaacacgctgggcgtgtccatggcgcgcgtcgactacgcgccgtggggcggcgccaaccc 12940 Query: 429 gccgcacgtccacccccgtgccaccgagat 458 ||||||| |||||| || ||||||||||| Sbjct: 12941 gccgcactcccacccgcgcgccaccgagat 12970
>gb|AY650052.1| Triticum monococcum germin-like protein 4 (GLP4) mRNA, complete cds Length = 944 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 172 tccgaccctgaccctctccaggacttctgtgtc 204 |||||||||| ||||||||||||||| |||||| Sbjct: 119 tccgaccctggccctctccaggacttttgtgtc 151
>gb|AF250933.1|AF250933 Hordeum vulgare germin A (GerA) gene, complete cds Length = 1243 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 172 tccgaccctgaccctctccaggacttctgtgtcgccg 208 ||||| |||||||| ||||||||||| |||||||||| Sbjct: 283 tccgatcctgacccactccaggacttttgtgtcgccg 319
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 182 accctctccaggacttctgtgtcgccg 208 ||||||||||||||||||| ||||||| Sbjct: 95 accctctccaggacttctgcgtcgccg 121
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 182 accctctccaggacttctgtgtcgccg 208 ||||||||||||||||||| ||||||| Sbjct: 111027 accctctccaggacttctgcgtcgccg 111053
>ref|XM_473904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 334 aacccgccgcacacccaccctcgtgccaccgagat 368
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 182 accctctccaggacttctgtgtcgccg 208 ||||||||||||||||||| ||||||| Sbjct: 41837 accctctccaggacttctgcgtcgccg 41863
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08, complete sequence Length = 148860 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 124762 aacccgccgcacacccaccctcgtgccaccgagat 124728
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 5637 aacccgccgcacacccaccctcgtgccaccgagat 5603
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 31427954 aacccgccgcacacccaccctcgtgccaccgagat 31427920
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 182 accctctccaggacttctgtgtcgccg 208 ||||||||||||||||||| ||||||| Sbjct: 5904263 accctctccaggacttctgcgtcgccg 5904289 Score = 44.1 bits (22), Expect = 0.47 Identities = 70/86 (81%) Strand = Plus / Plus Query: 373 aacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccg 432 ||||| ||||||||||||||| ||| | |||| ||| || || ||| |||||||||| Sbjct: 11367173 aacaccctgggcgtgtccatgtcccggatcgactacgcccccggcggcctcaacccgccg 11367232 Query: 433 cacgtccacccccgtgccaccgagat 458 ||| |||||| || ||||||||||| Sbjct: 11367233 cacacccacccgcgcgccaccgagat 11367258
>dbj|AK109057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E11, full insert sequence Length = 974 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 281 aacccgccgcacacccaccctcgtgccaccgagat 315
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 424 aacccgccgcacgtccacccccgtgccaccgagat 458 |||||||||||| |||||| |||||||||||||| Sbjct: 47889 aacccgccgcacacccaccctcgtgccaccgagat 47855
>ref|XM_476264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.47 Identities = 70/86 (81%) Strand = Plus / Plus Query: 373 aacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccg 432 ||||| ||||||||||||||| ||| | |||| ||| || || ||| |||||||||| Sbjct: 268 aacaccctgggcgtgtccatgtcccggatcgactacgcccccggcggcctcaacccgccg 327 Query: 433 cacgtccacccccgtgccaccgagat 458 ||| |||||| || ||||||||||| Sbjct: 328 cacacccacccgcgcgccaccgagat 353
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 44.1 bits (22), Expect = 0.47 Identities = 70/86 (81%) Strand = Plus / Plus Query: 373 aacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccg 432 ||||| ||||||||||||||| ||| | |||| ||| || || ||| |||||||||| Sbjct: 92450 aacaccctgggcgtgtccatgtcccggatcgactacgcccccggcggcctcaacccgccg 92509 Query: 433 cacgtccacccccgtgccaccgagat 458 ||| |||||| || ||||||||||| Sbjct: 92510 cacacccacccgcgcgccaccgagat 92535
>gb|AF250937.1|AF250937 Hordeum vulgare germin E (GerE) gene, partial cds Length = 783 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 423 caacccgccgcacgtccacccccgtgccaccgag 456 |||| |||||||| | |||||||||||||||||| Sbjct: 289 caacacgccgcacatacacccccgtgccaccgag 322
>gb|AF250935.1|AF250935 Hordeum vulgare germin F (GerF) gene, complete cds Length = 2689 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 423 caacccgccgcacgtccacccccgtgccaccgag 456 |||| |||||||| | |||||||||||||||||| Sbjct: 2036 caacacgccgcacatacacccccgtgccaccgag 2069
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 423 caacccgccgcacgtccacccccgtgccaccgag 456 |||| |||||||| | |||||||||||||||||| Sbjct: 2147 caacacgccgcacatacacccccgtgccaccgag 2180
>dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full insert sequence Length = 840 Score = 44.1 bits (22), Expect = 0.47 Identities = 70/86 (81%) Strand = Plus / Plus Query: 373 aacacgctgggcgtgtccatgaatcgggtggacttcgcgccggggggcaccaacccgccg 432 ||||| ||||||||||||||| ||| | |||| ||| || || ||| |||||||||| Sbjct: 297 aacaccctgggcgtgtccatgtcccggatcgactacgcccccggcggcctcaacccgccg 356 Query: 433 cacgtccacccccgtgccaccgagat 458 ||| |||||| || ||||||||||| Sbjct: 357 cacacccacccgcgcgccaccgagat 382
>emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on chromosome 6 Contains the 3' end of transforming protein P21A (K-RAS) (C-K-RAS) pseudogene, a novel gene, the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 113075 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccctgaccctctccaggactt 197 ||||||||||||||||||||| Sbjct: 90341 ccctgaccctctccaggactt 90361
>gb|AC167140.1| Mus musculus BAC clone RP24-482O17 from chromosome 14, complete sequence Length = 143541 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 caataagcagcaaccagcagt 32 ||||||||||||||||||||| Sbjct: 32460 caataagcagcaaccagcagt 32480
>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete sequence Length = 174286 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 caataagcagcaaccagcagt 32 ||||||||||||||||||||| Sbjct: 46610 caataagcagcaaccagcagt 46590
>ref|XM_480463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cacccccgtgccaccgagat 458 |||||||||||||||||||| Sbjct: 331 cacccccgtgccaccgagat 350
>ref|XM_323778.1| Neurospora crassa OR74A hypothetical protein (NCU04426.1) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcctggcatccgaccctg 181 |||||||||||||||||||| Sbjct: 950 cgtcctggcatccgaccctg 969
>ref|XM_952410.1| Neurospora crassa OR74A hypothetical protein (NCU04426.1) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcctggcatccgaccctg 181 |||||||||||||||||||| Sbjct: 950 cgtcctggcatccgaccctg 969
>ref|NG_003728.1| Rattus norvegicus olfactory receptor pseudogene 512 (Olr512-ps) on chromosome 3 Length = 1090 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tgttgcatagcaagcaatgg 106 |||||||||||||||||||| Sbjct: 547 tgttgcatagcaagcaatgg 528
>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4 Length = 177225 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgtcctggcatccgaccctg 181 |||||||||||||||||||| Sbjct: 122490 cgtcctggcatccgaccctg 122509
>emb|AL161507.2|ATCHRIV19 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 19 Length = 183181 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tcagccctatagctaagctt 87 |||||||||||||||||||| Sbjct: 159979 tcagccctatagctaagctt 159998
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cacccccgtgccaccgagat 458 |||||||||||||||||||| Sbjct: 5254441 cacccccgtgccaccgagat 5254460
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1099H05 Length = 186036 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cacccccgtgccaccgagat 458 |||||||||||||||||||| Sbjct: 122797 cacccccgtgccaccgagat 122816
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cacccccgtgccaccgagat 458 |||||||||||||||||||| Sbjct: 46029 cacccccgtgccaccgagat 46048
>gb|AF141879.1|AF141879 Oryza sativa germin-like protein 2 precursor (RGLP2) mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cacccccgtgccaccgagat 458 |||||||||||||||||||| Sbjct: 356 cacccccgtgccaccgagat 375
>gb|AF128395.1|F5K24 Arabidopsis thaliana BAC F5K24 Length = 109786 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tcagccctatagctaagctt 87 |||||||||||||||||||| Sbjct: 39708 tcagccctatagctaagctt 39727
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 agctggccaaggccggcaac 312 |||||||||||||||||||| Sbjct: 1617798 agctggccaaggccggcaac 1617779
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 ggtggacttcgcgccggggg 418 |||||||||||||||||||| Sbjct: 243846 ggtggacttcgcgccggggg 243865 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,947,000 Number of Sequences: 3902068 Number of extensions: 2947000 Number of successful extensions: 50530 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50095 Number of HSP's gapped (non-prelim): 393 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
