Clone Name | bart41e10 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191869.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 297 bits (150), Expect = 2e-77 Identities = 293/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 177 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 236 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 237 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 296 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggcccc-ggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 297 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 355 Query: 416 tccttgtcgccgcctacttcgtcgtgggcacagcagtcaccaagttaaagataaaacaaa 475 |||| |||||| |||||||||| |||||||||||| || ||||| || ||||| || | Sbjct: 356 tcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcaga 415 Query: 476 aagaagctttcggggtggccgagaaaaaaggaggaaggagagggcctggtagtgttattg 535 |||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| Sbjct: 416 aagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattg 475 Query: 536 gttctagtgctgctggttgtgtctgtgctctcctatca 573 |||| |||||||||||||||||||||||||| |||||| Sbjct: 476 gttccagtgctgctggttgtgtctgtgctctgctatca 513 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 37 tcccctccgcctcgtctcctcctcccctcc 66
>dbj|AK104436.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F03, full insert sequence Length = 1194 Score = 297 bits (150), Expect = 2e-77 Identities = 293/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 227 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 286 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 287 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 346 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggcccc-ggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 347 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 405 Query: 416 tccttgtcgccgcctacttcgtcgtgggcacagcagtcaccaagttaaagataaaacaaa 475 |||| |||||| |||||||||| |||||||||||| || ||||| || ||||| || | Sbjct: 406 tcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcaga 465 Query: 476 aagaagctttcggggtggccgagaaaaaaggaggaaggagagggcctggtagtgttattg 535 |||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| Sbjct: 466 aagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattg 525 Query: 536 gttctagtgctgctggttgtgtctgtgctctcctatca 573 |||| |||||||||||||||||||||||||| |||||| Sbjct: 526 gttccagtgctgctggttgtgtctgtgctctgctatca 563 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 87 tcccctccgcctcgtctcctcctcccctcc 116
>dbj|AK104272.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A09, full insert sequence Length = 1089 Score = 297 bits (150), Expect = 2e-77 Identities = 293/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 147 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 206 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 207 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 266 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggcccc-ggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 267 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 325 Query: 416 tccttgtcgccgcctacttcgtcgtgggcacagcagtcaccaagttaaagataaaacaaa 475 |||| |||||| |||||||||| |||||||||||| || ||||| || ||||| || | Sbjct: 326 tcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcaga 385 Query: 476 aagaagctttcggggtggccgagaaaaaaggaggaaggagagggcctggtagtgttattg 535 |||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| Sbjct: 386 aagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattg 445 Query: 536 gttctagtgctgctggttgtgtctgtgctctcctatca 573 |||| |||||||||||||||||||||||||| |||||| Sbjct: 446 gttccagtgctgctggttgtgtctgtgctctgctatca 483 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 7 tcccctccgcctcgtctcctcctcccctcc 36
>dbj|AK068733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159G20, full insert sequence Length = 1224 Score = 297 bits (150), Expect = 2e-77 Identities = 293/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 228 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 287 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 288 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 347 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggcccc-ggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 348 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 406 Query: 416 tccttgtcgccgcctacttcgtcgtgggcacagcagtcaccaagttaaagataaaacaaa 475 |||| |||||| |||||||||| |||||||||||| || ||||| || ||||| || | Sbjct: 407 tcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcaga 466 Query: 476 aagaagctttcggggtggccgagaaaaaaggaggaaggagagggcctggtagtgttattg 535 |||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| Sbjct: 467 aagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattg 526 Query: 536 gttctagtgctgctggttgtgtctgtgctctcctatca 573 |||| |||||||||||||||||||||||||| |||||| Sbjct: 527 gttccagtgctgctggttgtgtctgtgctctgctatca 564 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 88 tcccctccgcctcgtctcctcctcccctcc 117
>dbj|AK098962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074C02, full insert sequence Length = 1164 Score = 289 bits (146), Expect = 5e-75 Identities = 292/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 222 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 281 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| | ||| ||| ||||||| || ||||||||||||||||| || Sbjct: 282 cctcgccatcttcgtcgccgactccccggtgctcctgtctggcctctccgcctccggttt 341 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggcccc-ggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 342 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 400 Query: 416 tccttgtcgccgcctacttcgtcgtgggcacagcagtcaccaagttaaagataaaacaaa 475 |||| |||||| |||||||||| |||||||||||| || ||||| || ||||| || | Sbjct: 401 tcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcaga 460 Query: 476 aagaagctttcggggtggccgagaaaaaaggaggaaggagagggcctggtagtgttattg 535 |||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| Sbjct: 461 aagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattg 520 Query: 536 gttctagtgctgctggttgtgtctgtgctctcctatca 573 |||| |||||||||||||||||||||||||| |||||| Sbjct: 521 gttccagtgctgctggttgtgtctgtgctctgctatca 558 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 82 tcccctccgcctcgtctcctcctcccctcc 111
>gb|BT019028.1| Zea mays clone Contig534.F mRNA sequence Length = 1159 Score = 168 bits (85), Expect = 1e-38 Identities = 306/379 (80%), Gaps = 3/379 (0%) Strand = Plus / Plus Query: 197 cgctcccggacattgccgcggcggc---ggcgagcctccgggacgcggtcgccggcgcct 253 ||||||||||| |||| |||| ||| |||| || ||||||||||| |||||| ||||| Sbjct: 134 cgctcccggacgttgctgcgggggccgtggcgggcatccgggacgcgctcgccgacgcct 193 Query: 254 tccaggcgtctccgcccacgtggagctcggctgccgcgaccaacctcaccgtcttcgtcg 313 || | |||| ||||| |||||| | || || || || | ||||||| | ||||| ||| Sbjct: 194 tcttgacgtcgccgccgacgtggcggtccgccgctgccagcaacctcgctgtctttgtct 253 Query: 314 cgggctcgccgctgctcctctccggcctctccgcctccggcttcgcggccgcctacgtcc 373 | || |||||| |||| ||||| || || ||||||||||||||||| |||||||| || Sbjct: 254 ccggatcgccgttgcttctctcgggactgtccgcctccggcttcgccgccgcctatctct 313 Query: 374 tcggcaccctcacgtggcgcgcatttgggccccggggctacctccttgtcgccgcctact 433 | |||||||| ||||||||||| || || ||| ||| | |||||| || | ||| |||| Sbjct: 314 tgggcaccctgacgtggcgcgcgttcggagcccagggtttcctcctcgttgtcgcatact 373 Query: 434 tcgtcgtgggcacagcagtcaccaagttaaagataaaacaaaaagaagctttcggggtgg 493 |||| ||||||||||| || || ||||| | ||||| ||| || |||||| | || || | Sbjct: 374 tcgttgtgggcacagcggttactaagttgaggataagacagaaggaagctctgggagtag 433 Query: 494 ccgagaaaaaaggaggaaggagagggcctggtagtgttattggttctagtgctgctggtt 553 | || |||| ||||||||| ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 434 cagaaaaaagaggaggaagaagagggcctggaagtgttattggttctagcgctgccggtt 493 Query: 554 gtgtctgtgctctcctatc 572 |||| ||||| || ||||| Sbjct: 494 gtgtttgtgccctactatc 512
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 155 bits (78), Expect = 2e-34 Identities = 173/202 (85%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 30392473 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 30392532 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 30392533 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 30392592 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggccc-cggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 30392593 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 30392651 Query: 416 tccttgtcgccgcctacttcgt 437 |||| |||||| |||||||||| Sbjct: 30392652 tcctcgtcgcctcctacttcgt 30392673 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 441 gggcacagcagtcaccaagttaaagataaaacaaaaagaagctttcggggtggccgagaa 500 ||||||||||| || ||||| || ||||| || ||||||||||| |||||||| ||||| Sbjct: 30393785 gggcacagcagcaactaagttgaaaataaagcagaaagaagctttgggggtggcggagaa 30393844 Query: 501 aaaaggaggaaggagagggcctggtagtgttattggttctagtgctgctggttgtgtctg 560 || |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct: 30393845 aagaggaggaaggagagggactggaagtgttattggttccagtgctgctggttgtgtctg 30393904 Query: 561 tgctctcctatca 573 |||||| |||||| Sbjct: 30393905 tgctctgctatca 30393917 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 30392333 tcccctccgcctcgtctcctcctcccctcc 30392362 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 attgccgcggcggcggcgag 227 |||||||||||||||||||| Sbjct: 41549622 attgccgcggcggcggcgag 41549603 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caacctcaccgtcttcgtcg 313 |||||||||||||||||||| Sbjct: 33632786 caacctcaccgtcttcgtcg 33632805 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gccgcggcggcggcgagcct 230 |||||||||||||||||||| Sbjct: 22143695 gccgcggcggcggcgagcct 22143676
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 155 bits (78), Expect = 2e-34 Identities = 173/202 (85%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 20736 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 20795 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 20796 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 20855 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggccc-cggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 20856 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 20914 Query: 416 tccttgtcgccgcctacttcgt 437 |||| |||||| |||||||||| Sbjct: 20915 tcctcgtcgcctcctacttcgt 20936 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 441 gggcacagcagtcaccaagttaaagataaaacaaaaagaagctttcggggtggccgagaa 500 ||||||||||| || ||||| || ||||| || ||||||||||| |||||||| ||||| Sbjct: 22048 gggcacagcagcaactaagttgaaaataaagcagaaagaagctttgggggtggcggagaa 22107 Query: 501 aaaaggaggaaggagagggcctggtagtgttattggttctagtgctgctggttgtgtctg 560 || |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct: 22108 aagaggaggaaggagagggactggaagtgttattggttccagtgctgctggttgtgtctg 22167 Query: 561 tgctctcctatca 573 |||||| |||||| Sbjct: 22168 tgctctgctatca 22180 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 20596 tcccctccgcctcgtctcctcctcccctcc 20625
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 155 bits (78), Expect = 2e-34 Identities = 173/202 (85%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 237 cgcggtcgccggcgccttccaggcgtctccgcccacgtggagctcggctgccgcgaccaa 296 |||| |||||| |||||||| |||||| || || |||||||| ||||| |||| || ||| Sbjct: 78200 cgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaa 78259 Query: 297 cctcaccgtcttcgtcgcgggctcgccgctgctcctctccggcctctccgcctccggctt 356 |||| || |||||||||| ||||| ||| ||||||| || ||||||||||||||||| || Sbjct: 78260 cctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggttt 78319 Query: 357 cgcggccgcctacgtcctcggcaccctcacgtggcgcgcatttgggccc-cggggctacc 415 ||| ||||| ||| ||||||||||||||||||||||||| || |||||| |||||| | Sbjct: 78320 cgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggct-cg 78378 Query: 416 tccttgtcgccgcctacttcgt 437 |||| |||||| |||||||||| Sbjct: 78379 tcctcgtcgcctcctacttcgt 78400 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 441 gggcacagcagtcaccaagttaaagataaaacaaaaagaagctttcggggtggccgagaa 500 ||||||||||| || ||||| || ||||| || ||||||||||| |||||||| ||||| Sbjct: 79512 gggcacagcagcaactaagttgaaaataaagcagaaagaagctttgggggtggcggagaa 79571 Query: 501 aaaaggaggaaggagagggcctggtagtgttattggttctagtgctgctggttgtgtctg 560 || |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct: 79572 aagaggaggaaggagagggactggaagtgttattggttccagtgctgctggttgtgtctg 79631 Query: 561 tgctctcctatca 573 |||||| |||||| Sbjct: 79632 tgctctgctatca 79644 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 tcccctccgcctcgtttcctcctgccctcc 117 ||||||||||||||| ||||||| |||||| Sbjct: 78060 tcccctccgcctcgtctcctcctcccctcc 78089
>ref|NM_106509.3| Arabidopsis thaliana unknown protein AT1G78620 transcript variant AT1G78620.1 mRNA, complete cds Length = 2029 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 544 agtgtgattggttcaagtgctgctggttgtgtctgtgct 582
>ref|NM_202442.1| Arabidopsis thaliana unknown protein AT1G78620 transcript variant AT1G78620.2 mRNA, complete cds Length = 2056 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 571 agtgtgattggttcaagtgctgctggttgtgtctgtgct 609
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 15851 agtgtgattggttcaagtgctgctggttgtgtctgtgct 15889
>gb|AY063010.1| Arabidopsis thaliana unknown protein (At1g78620) mRNA, complete cds Length = 1033 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 508 agtgtgattggttcaagtgctgctggttgtgtctgtgct 546
>gb|AY035002.1| Arabidopsis thaliana unknown protein (At1g78620) mRNA, complete cds Length = 1234 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 538 agtgtgattggttcaagtgctgctggttgtgtctgtgct 576
>emb|BX818535.1|CNS0ACNO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1093 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 433 agtgtgattggttcaagtgctgctggttgtgtctgtgct 471
>gb|AY087104.1| Arabidopsis thaliana clone 3173 mRNA, complete sequence Length = 1228 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| |||||||||||||||||||||||| Sbjct: 544 agtgtgattggttcaagtgctgctggttgtgtctgtgct 582
>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence Length = 90044 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 526 agtgttattggttctagtgctgctggttgtgtctgtgct 564 ||||| |||||||| ||||||||||||||||| |||||| Sbjct: 8946 agtgtgattggttcaagtgctgctggttgtgtgtgtgct 8984
>ref|XM_472589.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ggcggcggcgagcctccgggac 237 |||||||||||||||||||||| Sbjct: 228 ggcggcggcgagcctccgggac 207
>emb|AL607036.5| Human DNA sequence from clone RP11-110C8 on chromosome 6, complete sequence Length = 54203 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 457 aagttaaagataaaacaaaaag 478 |||||||||||||||||||||| Sbjct: 30247 aagttaaagataaaacaaaaag 30226
>emb|AL591624.6| Human DNA sequence from clone RP11-143A22 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 146887 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 457 aagttaaagataaaacaaaaag 478 |||||||||||||||||||||| Sbjct: 65052 aagttaaagataaaacaaaaag 65031
>emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chromosome 6 Contains a CpG island, complete sequence Length = 178384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 457 aagttaaagataaaacaaaaag 478 |||||||||||||||||||||| Sbjct: 149852 aagttaaagataaaacaaaaag 149873
>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete sequence Length = 166517 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 457 aagttaaagataaaacaaaaag 478 |||||||||||||||||||||| Sbjct: 5373 aagttaaagataaaacaaaaag 5352
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ggcggcggcgagcctccgggac 237 |||||||||||||||||||||| Sbjct: 21759595 ggcggcggcgagcctccgggac 21759574
>gb|AF205589.5| Homo sapiens chromosome 8 clone CTA-393G12 map qtel, complete sequence Length = 143847 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gctgctccacacccacctctcc 90 |||||||||||||||||||||| Sbjct: 11317 gctgctccacacccacctctcc 11338
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 gctgctcctctccggcctctcc 345 |||||||||||||||||||||| Sbjct: 6865008 gctgctcctctccggcctctcc 6865029 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 tcccggacattgccgcggcggcggc 224 |||||||||| |||||||||||||| Sbjct: 667401 tcccggacatcgccgcggcggcggc 667425
>dbj|AK110861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D07, full insert sequence Length = 1443 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ggcggcggcgagcctccgggac 237 |||||||||||||||||||||| Sbjct: 335 ggcggcggcgagcctccgggac 314
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ggcggcggcgagcctccgggac 237 |||||||||||||||||||||| Sbjct: 71212 ggcggcggcgagcctccgggac 71191
>gb|BC040887.1| Homo sapiens kallikrein 8 (neuropsin/ovasin), transcript variant 1, mRNA (cDNA clone MGC:50513 IMAGE:5742016), complete cds Length = 1377 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 30 ctccgcccacgtggagctcgg 50
>gb|AC132254.3| Mus musculus BAC clone RP24-469M1 from chromosome Y, complete sequence Length = 163018 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 84 cctctcccctccgcctcgtttcctcctgccctccctc 120 |||||||||||| |||| || |||||| ||||||||| Sbjct: 121862 cctctcccctccccctccttccctccttccctccctc 121826
>gb|AC140223.3| Mus musculus BAC clone RP24-477G22 from chromosome Y, complete sequence Length = 189728 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 84 cctctcccctccgcctcgtttcctcctgccctccctc 120 |||||||||||| |||| || |||||| ||||||||| Sbjct: 145685 cctctcccctccccctccttccctccttccctccctc 145721
>gb|AY566267.1| Homo sapiens kallikrein 9 and kallikrein 8 bicistronic mRNA, partial sequence Length = 824 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 489 ctccgcccacgtggagctcgg 509
>ref|NM_012315.1| Homo sapiens kallikrein 9 (KLK9), mRNA Length = 1438 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 1269 ctccgcccacgtggagctcgg 1289
>gb|AF135026.1|AF135026 Homo sapiens kallikrein-like protein 3 (KLK9) gene, complete cds, alternatively spliced Length = 8622 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 8453 ctccgcccacgtggagctcgg 8473
>gb|AC010543.9| Homo sapiens chromosome 16 clone RP11-440K14, complete sequence Length = 180286 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 248 gcgccttccaggcgtctccgcccacgtgg 276 ||||||||||||| |||||||||| |||| Sbjct: 9401 gcgccttccaggcatctccgcccaggtgg 9373
>gb|AC092118.3| Homo sapiens chromosome 16 clone CTD-2600O9, complete sequence Length = 148794 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 248 gcgccttccaggcgtctccgcccacgtgg 276 ||||||||||||| |||||||||| |||| Sbjct: 137620 gcgccttccaggcatctccgcccaggtgg 137592
>gb|AC133605.3| Homo sapiens BAC clone CTD-2012B5 from 4, complete sequence Length = 48993 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 aagttaaagataaaacaaaaagaag 481 |||||||| |||||||||||||||| Sbjct: 44046 aagttaaaaataaaacaaaaagaag 44022
>gb|AF243527.1|AF243527 Homo sapiens serine protease gene cluster, complete sequence Length = 230000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 190551 ctccgcccacgtggagctcgg 190531
>gb|AC011473.4|AC011473 Homo sapiens chromosome 19, BAC BC349142 (CTC-518B2), complete sequence Length = 132323 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 2763 ctccgcccacgtggagctcgg 2743
>gb|AC154265.2| Mus musculus BAC clone RP24-319O20 from 16, complete sequence Length = 206136 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gagaaaaaaggaggaaggaga 516 ||||||||||||||||||||| Sbjct: 131010 gagaaaaaaggaggaaggaga 131030
>gb|DQ267420.1| Homo sapiens kallikrein 9 and kallikrein 8 bicistronic mRNA, partial sequence, alternatively spliced Length = 1388 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 705 ctccgcccacgtggagctcgg 725
>gb|DQ267419.1| Homo sapiens kallikrein 9 and kallikrein 8 bicistronic mRNA, partial sequence, alternatively spliced Length = 1602 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ctccgcccacgtggagctcgg 283 ||||||||||||||||||||| Sbjct: 1216 ctccgcccacgtggagctcgg 1236
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgggctcgccgctgctcctc 333 |||||||||||||||||||| Sbjct: 115067 cgggctcgccgctgctcctc 115048
>ref|NM_190879.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caacctcaccgtcttcgtcg 313 |||||||||||||||||||| Sbjct: 411 caacctcaccgtcttcgtcg 430
>ref|NM_193617.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gccgcggcggcggcgagcct 230 |||||||||||||||||||| Sbjct: 1050 gccgcggcggcggcgagcct 1031
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tcgtcgcgggctcgccgctgctcc 331 ||||||||| |||||||||||||| Sbjct: 48198 tcgtcgcggcctcgccgctgctcc 48175
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 3035751 taaagataaaacaaaaagaa 3035732
>ref|XM_875173.1| PREDICTED: Bos taurus similar to Transcription factor AP-2 alpha (AP2-alpha) (Activating enhancer-binding protein 2 alpha) (AP-2 transcription factor) (Activator protein-2) (AP-2), transcript variant 10 (LOC505849), mRNA Length = 1558 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 aaaaggaggaaggagagggc 520 |||||||||||||||||||| Sbjct: 1072 aaaaggaggaaggagagggc 1053
>gb|AC087861.2| Felis catus clone RP86-49M22, complete sequence Length = 107365 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 ataaaacaaaaagaagcttt 485 |||||||||||||||||||| Sbjct: 44113 ataaaacaaaaagaagcttt 44132
>ref|XM_653706.1| Aspergillus nidulans FGSC A4 adenylylsulfate kinase (AN1194.2), mRNA Length = 621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ccggcctctccgcctccggc 354 |||||||||||||||||||| Sbjct: 89 ccggcctctccgcctccggc 108
>gb|AC111029.8| Mus musculus chromosome 3, clone RP23-235E15, complete sequence Length = 196520 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 agaaaaaaggaggaaggaga 516 |||||||||||||||||||| Sbjct: 38148 agaaaaaaggaggaaggaga 38129
>gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence Length = 118381 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 107460 taaagataaaacaaaaagaa 107479
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 3021348 taaagataaaacaaaaagaa 3021329
>gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequence Length = 125364 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 1763 taaagataaaacaaaaagaa 1782
>emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on chromosome 9 Contains the 3' end of the NFX1 gene for X-box binding nuclear transcription factor 1, the AQP7 and AQP3 genes for aquaporin 7 and 3, a novel gene, the gene for nucleolar RNA-associated protein alpha, beta and gamma and a CpG island, complete sequence Length = 142839 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gctgctccacacccacctct 88 |||||||||||||||||||| Sbjct: 25666 gctgctccacacccacctct 25647
>emb|AL161743.20| Human DNA sequence from clone RP4-730B13 on chromosome 1q42.11-42.3 Contains the 3' end of a novel gene, part of the DISC1 gene for disrupted in schizophrenia 1 and a novel gene, complete sequence Length = 100170 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ccaggaccctgcccctggcc 147 |||||||||||||||||||| Sbjct: 11670 ccaggaccctgcccctggcc 11651
>emb|AL158822.19| Human DNA sequence from clone RP11-100C15 on chromosome 9q34.2-34.3 Contains the 3' end of a novel gene containing DKFZp434G2311, the KCNT1 gene for member 1 of the potassium channel subfamily T, the 3' end of a novel gene, part of the gene for a novel protein similar to mouse RIKEN 9230102I19 (9230102I19RIK) and nine CpG islands, complete sequence Length = 187336 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 gctccacacccacctctcccctcc 95 |||||||||||||| ||||||||| Sbjct: 57113 gctccacacccacccctcccctcc 57090
>emb|AL139324.19| Human DNA sequence from clone RP11-309I15 on chromosome 13 Contains part of a novel gene and a pseudogene similar to part of RAN binding protein 7 (RANBP7), complete sequence Length = 116131 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 496 gagaaaaaaggaggaaggagaggg 519 |||||| ||||||||||||||||| Sbjct: 8251 gagaaagaaggaggaaggagaggg 8228
>emb|Z33074.1|MC100 M.capricolum DNA for CONTIG MC100 Length = 1623 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 aagttaaagataaaacaaaa 476 |||||||||||||||||||| Sbjct: 523 aagttaaagataaaacaaaa 542
>emb|Y08866.1|ANSDGENE A.nidulans sD gene Length = 1299 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ccggcctctccgcctccggc 354 |||||||||||||||||||| Sbjct: 471 ccggcctctccgcctccggc 490
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 cccgcccctccgcgctcgctcccg 204 |||||||||| ||||||||||||| Sbjct: 169973 cccgcccctcggcgctcgctcccg 169996 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 cccgcccctccgcgctcgctcccg 204 |||||||||| ||||||||||||| Sbjct: 101770 cccgcccctcggcgctcgctcccg 101747
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gcctctccgcctccggcttcgcgg 361 ||||||||||||||||| |||||| Sbjct: 501537 gcctctccgcctccggcgtcgcgg 501560
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 217 gcggcggcgagcctccgggacgcggtcgccgg 248 |||||||||||| ||| |||||||||||||| Sbjct: 1148115 gcggcggcgagcgcccgcgacgcggtcgccgg 1148146
>gb|AE005924.1| Caulobacter crescentus CB15 section 250 of 359 of the complete genome Length = 12401 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccggcgccttccaggcgtc 263 |||||||||||||||||||| Sbjct: 7461 gccggcgccttccaggcgtc 7442
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 aaaaaggaggaaggagaggg 519 |||||||||||||||||||| Sbjct: 148663 aaaaaggaggaaggagaggg 148682
>gb|AC026448.5| Homo sapiens chromosome 4 clone CTD-2314I6, complete sequence Length = 104641 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccgcccctccgcgctcgctccc 203 |||||||||||||||||| ||||| Sbjct: 99795 ccccgcccctccgcgctccctccc 99772
>gb|AC093302.2| Homo sapiens chromosome 5 clone RP11-60A8, complete sequence Length = 179385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tgctgctggttgtgtctgtg 562 |||||||||||||||||||| Sbjct: 161082 tgctgctggttgtgtctgtg 161063
>gb|AC090599.4| Homo sapiens chromosome 11, clone RP11-674E24, complete sequence Length = 165287 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gaaaaaaggaggaaggagag 517 |||||||||||||||||||| Sbjct: 34813 gaaaaaaggaggaaggagag 34832
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 aagttaaagataaaacaaaa 476 |||||||||||||||||||| Sbjct: 186862 aagttaaagataaaacaaaa 186881
>emb|BX004890.11| Zebrafish DNA sequence from clone DKEY-9A6 in linkage group 11, complete sequence Length = 211406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 104822 taaagataaaacaaaaagaa 104803
>dbj|AK033309.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030490L12 product:weakly similar to XYLOSYLTRANSFERASE I (EC 2.4.2.26) (FRAGMENT) [Rattus norvegicus], full insert sequence Length = 2140 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgggctcgccgctgctcctc 333 |||||||||||||||||||| Sbjct: 109 cgggctcgccgctgctcctc 90
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tcgtcgcgggctcgccgctgctcc 331 ||||||||| |||||||||||||| Sbjct: 20039026 tcgtcgcggcctcgccgctgctcc 20039003
>gb|AC092384.5| Homo sapiens chromosome 16 clone RP11-830F9, complete sequence Length = 219070 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 cctcgtttcctcctgccctccctc 120 |||| ||||||||||||||||||| Sbjct: 122094 cctcctttcctcctgccctccctc 122071
>gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosome 13, complete sequence Length = 152221 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaaaaaaggaggaaggagag 517 |||||||||||||||||||| Sbjct: 75677 gaaaaaaggaggaaggagag 75658
>gb|AC099522.3| Homo sapiens chromosome 5 clone RP11-79P5, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 tgctgctggttgtgtctgtg 562 |||||||||||||||||||| Sbjct: 160853 tgctgctggttgtgtctgtg 160872
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 attgccgcggcggcggcgag 227 |||||||||||||||||||| Sbjct: 105915 attgccgcggcggcggcgag 105896
>gb|AE004725.1| Pseudomonas aeruginosa PAO1, section 286 of 529 of the complete genome Length = 10218 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 gcggtcgccggcgccttccaggcg 261 ||||| |||||||||||||||||| Sbjct: 3729 gcggtagccggcgccttccaggcg 3706
>ref|XM_344421.2| PREDICTED: Rattus norvegicus scavenger receptor class A, member 3 (predicted) (Scara3_predicted), mRNA Length = 3612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cctcctgccctccctcgtcg 124 |||||||||||||||||||| Sbjct: 213 cctcctgccctccctcgtcg 194
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ccggtgtttcgcggcacctg 177 |||||||||||||||||||| Sbjct: 5171839 ccggtgtttcgcggcacctg 5171820
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caacctcaccgtcttcgtcg 313 |||||||||||||||||||| Sbjct: 47658 caacctcaccgtcttcgtcg 47677
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gccgcggcggcggcgagcct 230 |||||||||||||||||||| Sbjct: 39181 gccgcggcggcggcgagcct 39162
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 attgccgcggcggcggcgag 227 |||||||||||||||||||| Sbjct: 117821 attgccgcggcggcggcgag 117802
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete sequence Length = 224461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 aagataaaacaaaaagaagc 482 |||||||||||||||||||| Sbjct: 14294 aagataaaacaaaaagaagc 14313
>emb|AL158802.1|CNS01RGO Human chromosome 14 DNA sequence BAC C-2008K18 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 taaaacaaaaagaagctttc 486 |||||||||||||||||||| Sbjct: 35994 taaaacaaaaagaagctttc 35975
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tcgtcgcgggctcgccgctgctcc 331 ||||||||| |||||||||||||| Sbjct: 20323939 tcgtcgcggcctcgccgctgctcc 20323916
>gb|AC142256.4| Mus musculus BAC clone RP24-528N23 from 3, complete sequence Length = 183488 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 agaaaaaaggaggaaggaga 516 |||||||||||||||||||| Sbjct: 63236 agaaaaaaggaggaaggaga 63217
>emb|AJ539164.1|MMU539164 Mus musculus mRNA for xylosyltransferase I (Xylt1 gene) Length = 3072 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgggctcgccgctgctcctc 333 |||||||||||||||||||| Sbjct: 109 cgggctcgccgctgctcctc 90
>ref|NM_175645.2| Mus musculus xylosyltransferase 1 (Xylt1), mRNA Length = 3072 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgggctcgccgctgctcctc 333 |||||||||||||||||||| Sbjct: 109 cgggctcgccgctgctcctc 90
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 taaagataaaacaaaaagaa 480 |||||||||||||||||||| Sbjct: 555105 taaagataaaacaaaaagaa 555124
>gb|DQ243065.1| Bombyx mori chromosome 26 microsatellite S2622-F sequence Length = 546 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 496 gagaaaaaaggaggaaggagaggg 519 |||||||||| ||||||||||||| Sbjct: 446 gagaaaaaagaaggaaggagaggg 423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,669,704 Number of Sequences: 3902068 Number of extensions: 5669704 Number of successful extensions: 156850 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 155101 Number of HSP's gapped (non-prelim): 1744 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)