ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41d07 |
|---|---|
| Clone Library Name | barley_pub |
>ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B| Length = 257 Score = 118 bits (295), Expect = 1e-26 Identities = 56/135 (41%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Frame = +1 Query: 142 EFPDLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCA 321 EFPDLG HCS C ++DFLP CD C +FC H +Y H C A KD+ V VCPLC Sbjct: 2 EFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCN 61 Query: 322 KGVRLNPNEDANITWESHVNTDC--DPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCS 495 V + E + H++ DC DP+ +R KC GCR+ T C+ CS Sbjct: 62 VPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLT--CERCS 119 Query: 496 KEHCLKHRFGPDHKC 540 + C+KHR DH C Sbjct: 120 RNFCIKHRHPLDHDC 134
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 116 bits (291), Expect = 4e-26 Identities = 55/135 (40%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Frame = +1 Query: 142 EFPDLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCA 321 EFPDLG HCS C ++DFLP CD C +FC H +Y H C A KD+ V VCPLC Sbjct: 2 EFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCN 61 Query: 322 KGVRLNPNEDANITWESHVNTDC--DPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCS 495 V + E + H++ DC DP+ +R KC GCR+ T C C Sbjct: 62 VPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLT--CDRCG 119 Query: 496 KEHCLKHRFGPDHKC 540 + C+KHR DH+C Sbjct: 120 RNFCIKHRHPLDHEC 134
>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B| Length = 257 Score = 115 bits (288), Expect = 8e-26 Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Frame = +1 Query: 142 EFPDLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCA 321 EFPDLG HCS C ++DFLP CD C +FC H +Y H C A KD+ V VCPLC Sbjct: 2 EFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAHHHCGSAYQKDIQVPVCPLCN 61 Query: 322 KGVRLNPNEDANITWESHVNTDC--DPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCS 495 V + E + H++ DC DP+ +R KC GCR+ T C C Sbjct: 62 VPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLT--CDRCG 119 Query: 496 KEHCLKHRFGPDHKC 540 + C+KHR DH C Sbjct: 120 RNFCIKHRHPLDHDC 134
>ZFAN1_MOUSE (Q8BFR6) AN1-type zinc finger protein 1| Length = 268 Score = 76.6 bits (187), Expect = 4e-14 Identities = 42/130 (32%), Positives = 54/130 (41%) Frame = +1 Query: 151 DLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCAKGV 330 D+G+HC V C Q DFLPF CD C +FCL+HRS SH C + N V Sbjct: 5 DIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVN--------------VV 50 Query: 331 RLNPNEDANITWESHVNTDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHCL 510 + P D + K C GC + + ++C C K CL Sbjct: 51 KERPKTDEH--------------------KSYSCSFKGCTDVELVA--VICPYCEKNFCL 88 Query: 511 KHRFGPDHKC 540 +HR DH C Sbjct: 89 RHRHQSDHDC 98 Score = 36.2 bits (82), Expect = 0.061 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 166 CSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPK 276 CS C ++ + C C+ FCL+HR + H C K Sbjct: 64 CSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEK 100
>ZFAN1_HUMAN (Q8TCF1) AN1-type zinc finger protein 1| Length = 268 Score = 76.3 bits (186), Expect = 5e-14 Identities = 44/130 (33%), Positives = 59/130 (45%) Frame = +1 Query: 151 DLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCAKGV 330 D+G+HC V C Q DFLPF CD C +FCL+HRS SH CP +VTV+ Sbjct: 5 DIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCP-----EVTVI--------- 50 Query: 331 RLNPNEDANITWESHVNTDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHCL 510 + + + H + C K C RE + ++C C K CL Sbjct: 51 ------NERLKTDQHTSYPC---------SFKDCAE---RELV----AVICPYCEKNFCL 88 Query: 511 KHRFGPDHKC 540 +HR DH+C Sbjct: 89 RHRHQSDHEC 98 Score = 38.1 bits (87), Expect = 0.016 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 166 CSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKCPK 276 CS DC + + + C C+ FCL+HR + H+C K Sbjct: 64 CSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEK 100
>YNP5_YEAST (P53899) Hypothetical 31.5 kDa protein in YGP1-YCK2 intergenic| region Length = 274 Score = 46.6 bits (109), Expect = 5e-05 Identities = 19/40 (47%), Positives = 24/40 (60%) Frame = +1 Query: 151 DLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHRSYTSHKC 270 D+G+HC+ C Q+DFLPF C C+ FC HR H C Sbjct: 13 DVGKHCAY--CRQLDFLPFHCSFCNEDFCSNHRLKEDHHC 50
>BRCA2_MOUSE (P97929) Breast cancer type 2 susceptibility protein homolog| (Fanconi anemia group D1 protein homolog) Length = 3329 Score = 33.9 bits (76), Expect = 0.30 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%) Frame = +1 Query: 202 PFTCDRCDFVFCLQHRS-YTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHV 378 P+T DF+ CL R+ K PK +N V+V V+L ++I++ES Sbjct: 683 PYTAREADFLLCLPERTCENDQKSPKVSNGKEKVLVSACLPSAVQL-----SSISFESQE 737 Query: 379 NT--DCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHC 507 N D + ++ + T K P+ +A S MCK K C Sbjct: 738 NPLGDHNGTSTLKLTPSSKLPL---SKADMVSREKMCKMPEKLQC 779
>ZG8_XENLA (P18737) Gastrula zinc finger protein XLCGF8.2DB (Fragment)| Length = 196 Score = 32.0 bits (71), Expect = 1.1 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 4/110 (3%) Frame = +1 Query: 202 PFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHVN 381 PFTC C F Q R+ SH K + C C KG N +++T + Sbjct: 5 PFTCKECGKGFT-QKRNLASHMTIHTGEKPFS---CTECGKGFTQKRNLASHLTIHTGEK 60 Query: 382 ----TDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHCLKHR 519 T+C Q++ + + T C +C KE KHR Sbjct: 61 PFPCTECGKGFTQKSNLVSHMKIHTGEKPFT------CTECGKEFAHKHR 104
>NPD_CAMJE (Q9JN05) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 233 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 184 HQIDFLP-FTCDRCDFVFCLQHRSYTSHKCPKANNKDV 294 H FLP C +C+ +F + + +T +CPK +KD+ Sbjct: 104 HLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDL 141
>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)| (Helicase-like protein NHL) Length = 1400 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Frame = +1 Query: 121 RRAMGTPEFPDLGRHCSVGDCHQIDFLPFTCDRCDF---VFCLQHRSYTSHKCP 273 ++A G P P L C C D +PF C CDF C Q S CP Sbjct: 1228 QQATGAPGGP-LSAGCVCQGCGAEDVVPFQCPACDFQRCQACWQRHLQASRMCP 1280
>ZN619_HUMAN (Q8N2I2) Zinc finger protein 619| Length = 560 Score = 31.6 bits (70), Expect = 1.5 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 9/150 (6%) Frame = +1 Query: 97 DLPKAARFRRAMGTPEFPDLGRHCSVGDCHQI---DFLPFTCDRCDFVFCLQHRSYTSHK 267 D+P+ F+ + + D G +GDC + D T +R + L+ S ++H Sbjct: 116 DVPQHPDFKDRLEKSQLHDTGNKTKIGDCTDLTVQDHESSTTEREEIARKLEESSVSTHL 175 Query: 268 CPKAN-NKDVTVVVCPLCAKGVRLNPNEDANITWESHVNTDCDPSNYQRATKKKKCPVPG 444 K K+ C C G NP+ D ++ H N T + + Sbjct: 176 ITKQGFAKEQVFYKCGEC--GSYYNPHSDFHLHQRVHTNEKPYTCKECGKTFRYNSKLSR 233 Query: 445 CREALTFSNTIMCKDCSK-----EHCLKHR 519 ++ T C++C + H L+H+ Sbjct: 234 HQKIHTGEKPYSCEECGQAFSQNSHLLQHQ 263
>ST18_HUMAN (O60284) Suppression of tumorigenicity protein 18 (Zinc finger| protein 387) Length = 1047 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +1 Query: 253 YTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHVNTDCDPSNYQRATKKKKC 432 YTSH+ T CPL AK + NP A+++W+ + + C Sbjct: 831 YTSHR---------TASGCPLAAKRQKENPLNGASLSWKLN------------KQELPHC 869 Query: 433 PVPGC 447 P+PGC Sbjct: 870 PLPGC 874
>ZNF93_HUMAN (P35789) Zinc finger protein 93 (Zinc finger protein 505) (Zinc| finger protein HTF34) Length = 620 Score = 30.8 bits (68), Expect = 2.6 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 2/145 (1%) Frame = +1 Query: 70 TGASRRVCSDLPKAARFRRAMGTPEFPDLGRHCSVGDCHQIDFLPFTCDRCDFVFCLQHR 249 TG +C + KA ++ A+ T + G P+ CD+CD F + Sbjct: 196 TGEKPYICEECGKAFKYSSALNTHKRIHTGEK------------PYKCDKCDKAF-IASS 242 Query: 250 SYTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHVNTDCDPSNYQRATK--K 423 + + H+ K C C K N+ + +T ++T P + K Sbjct: 243 TLSKHEIIHTGKKPYK---CEECGKAF----NQSSTLTKHKKIHTGEKPYKCEECGKAFN 295 Query: 424 KKCPVPGCREALTFSNTIMCKDCSK 498 + + ++ T +C++C K Sbjct: 296 QSSTLTKHKKIHTGEKPYVCEECGK 320
>TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protein 3 (EC| 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20) Length = 790 Score = 30.4 bits (67), Expect = 3.3 Identities = 28/109 (25%), Positives = 37/109 (33%), Gaps = 9/109 (8%) Frame = +1 Query: 235 CLQHRSYTSHKCPKANNKDVTVVVCPLCAKGVR--------LNPNEDANITWESHVNTDC 390 C + R +K PK N+K + + R NP E T H Sbjct: 407 CSERRQKNQNKLPKLNSKPGPEGLPGMALGASRGEAYEPLAWNPEES---TGGPHSAPPT 463 Query: 391 DPSNYQRA-TKKKKCPVPGCREALTFSNTIMCKDCSKEHCLKHRFGPDH 534 PS + + T KC PGC L + C+ C L PDH Sbjct: 464 APSPFLFSETTAMKCRSPGCPFTLNVQHNGFCERCHNARQLHASHAPDH 512 Score = 29.3 bits (64), Expect = 7.5 Identities = 12/44 (27%), Positives = 20/44 (45%) Frame = +1 Query: 367 ESHVNTDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSK 498 E H +PS Q + KC P C ++ + +C +CS+ Sbjct: 366 EGHAQNPMEPSVPQLSLMDVKCETPNCPFFMSVNTQPLCHECSE 409
>LPP_RAT (Q5XI07) Lipoma-preferred partner homolog| Length = 632 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +1 Query: 88 VCSDLPKAARFRRAMGTPEFPDLGRHC-SVGDCHQ-IDFLPFTCDRCDFVFCLQ 243 VCS P R RA G P HC + CH+ +D +PFT D C + C++ Sbjct: 498 VCSK-PIMERILRATGKAYHP----HCFTCVMCHRSLDGIPFTVDACGLIHCIE 546
>LPP_MOUSE (Q8BFW7) Lipoma-preferred partner homolog| Length = 613 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +1 Query: 88 VCSDLPKAARFRRAMGTPEFPDLGRHC-SVGDCHQ-IDFLPFTCDRCDFVFCLQ 243 VCS P R RA G P HC + CH+ +D +PFT D C + C++ Sbjct: 479 VCSK-PIMERILRATGKAYHP----HCFTCVMCHRSLDGIPFTVDACGLIHCIE 527
>ACSA2_RHIME (Q92KX2) Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA| ligase 2) (Acyl-activating enzyme 2) Length = 649 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 70 TGASRRVCSDLPKAARFRRAMGTPEFPDLGRHCSVGDCHQID 195 TG S V L AA G P FPD GR V D H+++ Sbjct: 311 TGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVVDKHKVN 352
>ST18_MOUSE (Q80TY4) Suppression of tumorigenicity protein 18| Length = 1045 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/65 (29%), Positives = 27/65 (41%) Frame = +1 Query: 253 YTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHVNTDCDPSNYQRATKKKKC 432 YTSH+ T CPL AK + NP A ++W+ + + C Sbjct: 829 YTSHR---------TASGCPLAAKRQKENPLNGAPLSWKLN------------KQELPHC 867 Query: 433 PVPGC 447 P+PGC Sbjct: 868 PLPGC 872
>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic| region Length = 1183 Score = 30.0 bits (66), Expect = 4.4 Identities = 37/164 (22%), Positives = 64/164 (39%) Frame = +1 Query: 22 PPLPCRWQRPRQPSERTGASRRVCSDLPKAARFRRAMGTPEFPDLGRHCSVGDCHQIDFL 201 PP P + ++PS + + + S + + R G P L RH + + L Sbjct: 987 PPPPPTSRHNKEPSSKLLSPTKEISIVSVSPR----KGESNLPALERHSTPKPLPPVPAL 1042 Query: 202 PFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHVN 381 + V + S H +N + CP + P+E + T S V+ Sbjct: 1043 SLSKP----VSLQKSSSELQHAKETIDNGKIVPRPCPPIRRKSSTAPDEISTSTKNSGVS 1098 Query: 382 TDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHCLK 513 T DP + +TK +K PV L+ + + + S+EH +K Sbjct: 1099 TTEDPEPAKASTKPEKPPVVKKPHYLSVAANKL--NTSQEHSIK 1140
>ZFH1_DROME (P28166) Zinc finger protein 1 (Zinc finger homeodomain protein 1)| Length = 1054 Score = 30.0 bits (66), Expect = 4.4 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 199 LPFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVVVCPLCAK 324 LP+ CD+CD F Q S HK + + + CP K Sbjct: 965 LPYVCDQCDKAFAKQ-SSLARHKYEHSGQRPYQCIECPKAFK 1005
>UBP7_SCHPO (Q9P7S5) Probable ubiquitin carboxyl-terminal hydrolase 7 (EC| 3.1.2.15) (Ubiquitin thioesterase 7) (Ubiquitin-specific processing protease 7) (Deubiquitinating enzyme 7) Length = 875 Score = 29.6 bits (65), Expect = 5.7 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 5/76 (6%) Frame = +1 Query: 91 CSDLPKAARFRRAMGTPE-FPDLGRH----CSVGDCHQIDFLPFTCDRCDFVFCLQHRSY 255 CS L K + G D +H C+ + D+ C C ++FC H S Sbjct: 56 CSHLKKGVKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLCANCGYLFCCNHESD 115 Query: 256 TSHKCPKANNKDVTVV 303 S K + N K V Sbjct: 116 HSRKHFEKNKKHCVFV 131
>LIMK1_DROME (Q8IR79) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (dLIMK)| Length = 1257 Score = 29.6 bits (65), Expect = 5.7 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +1 Query: 343 NEDANITWESHVNTDCDPSNYQRATKKKK--CPVPGCREALTFSN 471 N + N+T ++ N+ C PS KK K P+P ++ T SN Sbjct: 1050 NSNGNVTTTTNTNSSCPPSASDWLPKKHKLTLPLPSAQQQRTSSN 1094
>CST9_YEAST (Q06032) Chromosome stability protein 9 (Molcular zipper protein 3)| Length = 482 Score = 29.6 bits (65), Expect = 5.7 Identities = 10/34 (29%), Positives = 16/34 (47%) Frame = +1 Query: 202 PFTCDRCDFVFCLQHRSYTSHKCPKANNKDVTVV 303 P C + C QH TS CP + D++++ Sbjct: 66 PLRLTSCAHILCSQHSPLTSKVCPICRSSDISII 99
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog| (Fanconi anemia group D1 protein homolog) Length = 3343 Score = 29.6 bits (65), Expect = 5.7 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 1/103 (0%) Frame = +1 Query: 202 PFTCDRCDFVFCLQHRS-YTSHKCPKANNKDVTVVVCPLCAKGVRLNPNEDANITWESHV 378 P+T DF+ CL RS K PK +++ V+V G + ++I+++S Sbjct: 679 PYTALEADFLSCLPERSCENDQKSPKVSDRKEKVLVSACRPSGRLAAAVQLSSISFDSQE 738 Query: 379 NTDCDPSNYQRATKKKKCPVPGCREALTFSNTIMCKDCSKEHC 507 N N K P + + S MCK K C Sbjct: 739 N-PLGSHNVTSTLKLTPSPKTPLSKPVVVSRGKMCKMPEKLQC 780
>PDCD2_MOUSE (P46718) Programmed cell death protein 2 (Zinc finger protein Rp-8)| Length = 343 Score = 29.3 bits (64), Expect = 7.5 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Frame = +1 Query: 310 PLCAKGVRLN----PNEDANITWESHVNTDCDPSN---YQRATKKKKCPVPGCREALTFS 468 PLC G+R+ P +A ++E T+ + Q + C V GC +T S Sbjct: 87 PLCCAGLRVFRNQLPRNNAFYSYEPPSETEALGTECVCLQLKSGAHLCRVCGCLAPMTCS 146 Query: 469 NTIMCKDCSKEH-CLKHRFGPDHKC 540 CSKEH L R G C Sbjct: 147 RCKQAHYCSKEHQTLDWRLGHKQAC 171
>TFB3_SCHPO (O94684) RNA polymerase II transcription factor B subunit 3 (RNA| polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) (CDK-activating kinase assembly factor MAT1 homolog) (RING finger prot Length = 318 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = +1 Query: 307 CPLCAKGVRLNPNEDANITWESHVNTDCDPSNYQRATKKKKCPVPGCREAL 459 CPLC LNPN I E + + T +CP PGC + L Sbjct: 13 CPLCQADRYLNPNMKLLINPECYHKMCESCVDRIFTTGPAQCPTPGCNKIL 63
>KCNN2_HUMAN (Q9H2S1) Small conductance calcium-activated potassium channel| protein 2 (SK2) Length = 579 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +2 Query: 323 KEFASIQMKMQTSPGSLMLIPTAIHQITREQQRK-RNAQFLGAEKH 457 K +++ K++T GS+ +P I Q R+QQR AQ +KH Sbjct: 505 KRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFIEAQMESYDKH 550
>TF3A_ICTPU (P79797) Transcription factor IIIA (Factor A) (TFIIIA)| Length = 322 Score = 29.3 bits (64), Expect = 7.5 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +1 Query: 181 CHQIDFLPFTCDRCDFVFC 237 C PF CDRCD FC Sbjct: 34 CKHTGLRPFACDRCDKTFC 52
>PDCD2_RAT (P47816) Programmed cell death protein 2 (Zinc finger protein Rp-8)| (Fragment) Length = 287 Score = 28.9 bits (63), Expect = 9.7 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Frame = +1 Query: 310 PLCAKGVRLN----PNEDANITWESHVNTDCDPSN---YQRATKKKKCPVPGCREALTFS 468 PLC G+R+ P ++A ++E T + Q + C V GC +T S Sbjct: 31 PLCCAGLRVFRNQLPRKNAFYSYEPPSETGASDTECVCLQLKSGAHLCRVCGCLAPMTCS 90 Query: 469 NTIMCKDCSKEH 504 CSKEH Sbjct: 91 RCKQAHYCSKEH 102
>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 409 Score = 28.9 bits (63), Expect = 9.7 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 396 IKLPESNKEKEMPSSWVQRSTD 461 I LP+++ E E+P W +R+TD Sbjct: 2 IALPDTDSEDELPPGWEERATD 23
>YDEP_SHIFL (Q83RF3) Protein ydeP| Length = 759 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Frame = +1 Query: 118 FRRAMGTPEFPDLGRHC----SVGDCHQIDFLPFTC-----DRCDFVFCLQHRSYTSH 264 F R G+ FPD C SVG I T ++CD V C+ H T+H Sbjct: 166 FAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNH 223
>YDEP_ECOLI (P77561) Protein ydeP| Length = 759 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Frame = +1 Query: 118 FRRAMGTPEFPDLGRHC----SVGDCHQIDFLPFTC-----DRCDFVFCLQHRSYTSH 264 F R G+ FPD C SVG I T ++CD V C+ H T+H Sbjct: 166 FAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNH 223
>YDEP_ECO57 (Q8XAX1) Protein ydeP| Length = 759 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Frame = +1 Query: 118 FRRAMGTPEFPDLGRHC----SVGDCHQIDFLPFTC-----DRCDFVFCLQHRSYTSH 264 F R G+ FPD C SVG I T ++CD V C+ H T+H Sbjct: 166 FAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNH 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,627,306 Number of Sequences: 219361 Number of extensions: 1477444 Number of successful extensions: 5043 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4519 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5014 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
