ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472645.1| Oryza sativa (japonica cultivar-group), predic... 248 2e-62
2dbj|AK062427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3gb|AY104973.1| Zea mays PCO137378 mRNA sequence 246 7e-62
4dbj|AK119720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
7ref|XM_466791.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AK058853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
12dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.13
14gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 44 0.50
15ref|XM_748648.1| Aspergillus fumigatus Af293 triglyceride lipase... 42 2.0
16emb|AL359957.44| Human DNA sequence from clone RP11-62O22 on chr... 42 2.0
17gb|AC025062.6| Homo sapiens chromosome 8, clone RP11-685B14, com... 42 2.0
18gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, comp... 42 2.0
19gb|AE004993.1| Halobacterium sp. NRC-1 section 24 of 170 of the ... 42 2.0
20dbj|D10869.1|HUMHNAT31 Human h NAT allele 3-1 gene for arylamine... 42 2.0
21dbj|D10868.1|HUMHNAT21 Human h NAT allele 2-1 gene for arylamine... 42 2.0
22dbj|D10867.1|HUMHNAT11 Human h NAT allele 1-1 gene for arylamine... 42 2.0
23gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 7.8
24gb|AY768549.1| Homo sapiens fibroblast growth factor receptor 3 ... 40 7.8
25gb|BC008908.2| Homo sapiens MID1 interacting protein 1 (gastrula... 40 7.8
26gb|BC019332.1| Homo sapiens MID1 interacting protein 1 (gastrula... 40 7.8
27gb|AF241729.2| Homo sapiens chromosome X clone RP5-817K2 map p11... 40 7.8
28gb|AF241728.2| Homo sapiens chromosome X clone RP4-646N3 map p11... 40 7.8
29emb|AL731555.10| Human DNA sequence from clone RP11-157J13 on ch... 40 7.8
30gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosom... 40 7.8
31emb|CR623767.1| full-length cDNA clone CS0DI071YM21 of Placenta ... 40 7.8
32gb|AE005731.1| Caulobacter crescentus CB15 section 57 of 359 of ... 40 7.8
33emb|CR621138.1| full-length cDNA clone CS0DN003YE10 of Adult bra... 40 7.8
34emb|CR610591.1| full-length cDNA clone CS0DI083YL02 of Placenta ... 40 7.8
35emb|CR598612.1| full-length cDNA clone CS0DG005YI05 of B cells (... 40 7.8
36emb|CR597771.1| full-length cDNA clone CS0DI067YJ24 of Placenta ... 40 7.8
37emb|CR595671.1| full-length cDNA clone CS0DL002YA18 of B cells (... 40 7.8
38emb|CR594371.1| full-length cDNA clone CS0DB006YL01 of Neuroblas... 40 7.8
39emb|CR592650.1| full-length cDNA clone CS0DI062YK15 of Placenta ... 40 7.8
40dbj|AK001248.1| Homo sapiens cDNA FLJ10386 fis, clone NT2RM20021... 40 7.8
41gb|AF487554.1| Homo sapiens fibroblast growth factor receptor 3 ... 40 7.8
42gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, comple... 40 7.8
43dbj|AB169884.1| Macaca fascicularis brain cDNA, clone: QnpA-1464... 40 7.8
44ref|NM_021242.3| Homo sapiens MID1 interacting protein 1 (gastru... 40 7.8
45gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosom... 40 7.8
46gb|AC181984.1| Pan troglodytes chromosome X clone CH251-244H4 ma... 40 7.8
47gb|AC022212.4|AC022212 Homo sapiens BAC clone RP11-708E9 from Xq... 40 7.8
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
49dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
50emb|AL928595.15| Mouse DNA sequence from clone RP23-34C18 on chr... 40 7.8
51dbj|AK107692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
52gb|AF050158.1|AF050158 Homo sapiens unknown mRNA, partial sequence 40 7.8
53emb|AJ272057.1|HSA272057 Homo sapiens mRNA for hypothetical prot... 40 7.8
54emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chro... 40 7.8
55emb|Y08099.1|HSFGFR316 H.sapiens FGFR3 gene, intron 16 40 7.8 
>ref|XM_472645.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 447

 Score =  248 bits (125), Expect = 2e-62
 Identities = 152/161 (94%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
           |||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||| ||
Sbjct: 156 ggcgacggagaagctcggcgtccgtgtggagcgcaacccgcccgagtcccgcctctccga 215

                                                                       
Query: 139 gctcggcgtccgccagtggcccaagtgggggtgcgagaagagcaagttcccgtggaccta 198
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 216 gctcggcgtccgcgagtggcccaagtgggggtgcgagaagagcaagttcccgtggacgta 275

                                                    
Query: 199 ctcggccaaggagacgtgctacctgctgcaggggaaggtga 239
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctcggccaaggagacgtgctacctgctgcaggggaaggtga 316
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>dbj|AK062427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-H05, full
           insert sequence
          Length = 650

 Score =  248 bits (125), Expect = 2e-62
 Identities = 152/161 (94%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
           |||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||| ||
Sbjct: 196 ggcgacggagaagctcggcgtccgtgtggagcgcaacccgcccgagtcccgcctctccga 255

                                                                       
Query: 139 gctcggcgtccgccagtggcccaagtgggggtgcgagaagagcaagttcccgtggaccta 198
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 256 gctcggcgtccgcgagtggcccaagtgggggtgcgagaagagcaagttcccgtggacgta 315

                                                    
Query: 199 ctcggccaaggagacgtgctacctgctgcaggggaaggtga 239
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctcggccaaggagacgtgctacctgctgcaggggaaggtga 356
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>gb|AY104973.1| Zea mays PCO137378 mRNA sequence
          Length = 689

 Score =  246 bits (124), Expect = 7e-62
 Identities = 161/172 (93%), Gaps = 1/172 (0%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
           |||| |||||||||| ||| | | | |||||||||||||| |||||||||| ||||| ||
Sbjct: 169 ggcgacggagaagctgggcatcaaggtggagcgcaacccgcccgagtcccgtctctccga 228

                                                                       
Query: 139 gctcggcgtccgccagtggcccaagtgggggtgcgagaagagcaagttcccgtggaccta 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gctcggcgtccgccagtggcccaagtgggggtgcgagaagagcaagttcccgtggaccta 288

                                                               
Query: 199 ctcggccaaggagacgtgctacctgctgcaggggaaggtg-aggtgtacccc 249
           ||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 289 ctccgccaaggagacgtgctacctgctgcaggggaaggtgaaggtgtacccc 340
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>dbj|AK119720.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-G07, full
           insert sequence
          Length = 636

 Score =  240 bits (121), Expect = 4e-60
 Identities = 151/161 (93%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
           |||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||| ||
Sbjct: 182 ggcgacggagaagctcggcgtccgtgtggagcgcaacccgcccgagtcccgcctctccga 241

                                                                       
Query: 139 gctcggcgtccgccagtggcccaagtgggggtgcgagaagagcaagttcccgtggaccta 198
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 242 gctcggcgtccgcgagtggcccaagtgggggtgcgagaagagcaagttcccgtggacgta 301

                                                    
Query: 199 ctcggccaaggagacgtgctacctgctgcaggggaaggtga 239
           ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctcagccaaggagacgtgctacctgctgcaggggaaggtga 342
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  145 bits (73), Expect = 2e-31
 Identities = 76/77 (98%)
 Strand = Plus / Minus

                                                                            
Query: 163      gtgggggtgcgagaagagcaagttcccgtggacctactcggccaaggagacgtgctacct 222
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 22179179 gtgggggtgcgagaagagcaagttcccgtggacgtactcggccaaggagacgtgctacct 22179120

                                 
Query: 223      gctgcaggggaaggtga 239
                |||||||||||||||||
Sbjct: 22179119 gctgcaggggaaggtga 22179103



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                            
Query: 79       ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
                |||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||| ||
Sbjct: 22179347 ggcgacggagaagctcggcgtccgtgtggagcgcaacccgcccgagtcccgcctctccga 22179288

                                           
Query: 139      gctcggcgtccgccagtggcccaagtg 165
                ||||||||||||| |||||||||||||
Sbjct: 22179287 gctcggcgtccgcgagtggcccaagtg 22179261
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>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score =  145 bits (73), Expect = 2e-31
 Identities = 76/77 (98%)
 Strand = Plus / Minus

                                                                         
Query: 163   gtgggggtgcgagaagagcaagttcccgtggacctactcggccaaggagacgtgctacct 222
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 49040 gtgggggtgcgagaagagcaagttcccgtggacgtactcggccaaggagacgtgctacct 48981

                              
Query: 223   gctgcaggggaaggtga 239
             |||||||||||||||||
Sbjct: 48980 gctgcaggggaaggtga 48964



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                         
Query: 79    ggcgtcggagaagctcggcgtgaggctggagcgcaacccggccgagtcccgcctctcgga 138
             |||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||| ||
Sbjct: 49208 ggcgacggagaagctcggcgtccgtgtggagcgcaacccgcccgagtcccgcctctccga 49149

                                        
Query: 139   gctcggcgtccgccagtggcccaagtg 165
             ||||||||||||| |||||||||||||
Sbjct: 49148 gctcggcgtccgcgagtggcccaagtg 49122
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>ref|XM_466791.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 763

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 208 ggagacgtgctacctgctgcaggggaaggtgagg 241
           |||||||||||||||| || ||||||||||||||
Sbjct: 285 ggagacgtgctacctggtgaaggggaaggtgagg 318
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 208      ggagacgtgctacctgctgcaggggaaggtgagg 241
                |||||||||||||||| || ||||||||||||||
Sbjct: 24696239 ggagacgtgctacctggtgaaggggaaggtgagg 24696272
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>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1372_D06
          Length = 129242

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 208   ggagacgtgctacctgctgcaggggaaggtgagg 241
             |||||||||||||||| || ||||||||||||||
Sbjct: 77637 ggagacgtgctacctggtgaaggggaaggtgagg 77670
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>dbj|AK058853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A12, full
           insert sequence
          Length = 762

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 208 ggagacgtgctacctgctgcaggggaaggtgagg 241
           |||||||||||||||| || ||||||||||||||
Sbjct: 285 ggagacgtgctacctggtgaaggggaaggtgagg 318
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 163      gtgggggtgcgagaagagcaagttcccgtggacctactcggccaagga 210
                ||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 24784248 gtgggggtgtgagaagagcaagtttccgtgtacatccttggccaagga 24784295
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 163   gtgggggtgcgagaagagcaagttcccgtggacctactcggccaagga 210
             ||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 85049 gtgggggtgtgagaagagcaagtttccgtgtacatccttggccaagga 85096
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 64      ggcggcgagggtgagggcgtcgg 86
               |||||||||||||||||||||||
Sbjct: 8878189 ggcggcgagggtgagggcgtcgg 8878167
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 535     tgcacggatgctgcgctccgcc 556
               ||||||||||||||||||||||
Sbjct: 3886874 tgcacggatgctgcgctccgcc 3886895
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>ref|XM_748648.1| Aspergillus fumigatus Af293 triglyceride lipase-cholesterol
           esterase (Afu5g08960) partial mRNA
          Length = 1404

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 518 gcgcaggcctccaactttgca 538
           |||||||||||||||||||||
Sbjct: 226 gcgcaggcctccaactttgca 246
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>emb|AL359957.44| Human DNA sequence from clone RP11-62O22 on chromosome 10 Contains part
             of a novel gene (KIAA0934) and a CpG island, complete
             sequence
          Length = 137511

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    ccctccttccccagcacccag 51
             |||||||||||||||||||||
Sbjct: 22279 ccctccttccccagcacccag 22299
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>gb|AC025062.6| Homo sapiens chromosome 8, clone RP11-685B14, complete sequence
          Length = 190459

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    aatccatctctcttcgcctgt 361
              |||||||||||||||||||||
Sbjct: 178648 aatccatctctcttcgcctgt 178668
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>gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, complete sequence
          Length = 200827

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 341    aatccatctctcttcgcctgt 361
              |||||||||||||||||||||
Sbjct: 158935 aatccatctctcttcgcctgt 158915
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>gb|AE004993.1| Halobacterium sp. NRC-1 section 24 of 170 of the complete genome
          Length = 10286

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 127  ccgcctctcggagctcggcgtccgc 151
            ||||||||||| |||||||||||||
Sbjct: 8839 ccgcctctcggcgctcggcgtccgc 8863
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>dbj|D10869.1|HUMHNAT31 Human h NAT allele 3-1 gene for arylamine N-acetyltransferase
          Length = 2768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 341 aatccatctctcttcgcctgt 361
           |||||||||||||||||||||
Sbjct: 342 aatccatctctcttcgcctgt 362
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>dbj|D10868.1|HUMHNAT21 Human h NAT allele 2-1 gene for arylamine N-acetyltransferase
          Length = 2768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 341 aatccatctctcttcgcctgt 361
           |||||||||||||||||||||
Sbjct: 342 aatccatctctcttcgcctgt 362
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>dbj|D10867.1|HUMHNAT11 Human h NAT allele 1-1 gene for arylamine N-acetyltransferase
          Length = 2768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 341 aatccatctctcttcgcctgt 361
           |||||||||||||||||||||
Sbjct: 342 aatccatctctcttcgcctgt 362
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    cccgcctctcggagctcggc 145
              ||||||||||||||||||||
Sbjct: 658441 cccgcctctcggagctcggc 658460
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>gb|AY768549.1| Homo sapiens fibroblast growth factor receptor 3 (achondroplasia,
             thanatophoric dwarfism) (FGFR3) gene, complete cds
          Length = 18009

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   gctgcaggggaaggtgaggt 242
             ||||||||||||||||||||
Sbjct: 13749 gctgcaggggaaggtgaggt 13730
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>gb|BC008908.2| Homo sapiens MID1 interacting protein 1 (gastrulation specific
            G12-like (zebrafish)), mRNA (cDNA clone MGC:15174
            IMAGE:3638510), complete cds
          Length = 2372

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1827 cgccccgccttccccagcacccag 1804
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>gb|BC019332.1| Homo sapiens MID1 interacting protein 1 (gastrulation specific
            G12-like (zebrafish)), mRNA (cDNA clone MGC:972
            IMAGE:3541914), complete cds
          Length = 1889

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1372 cgccccgccttccccagcacccag 1349
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>gb|AF241729.2| Homo sapiens chromosome X clone RP5-817K2 map p11.4, complete sequence
          Length = 141582

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    cgcccctccttccccagcacccag 51
             |||||| |||||||||||||||||
Sbjct: 10475 cgccccgccttccccagcacccag 10452
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>gb|AF241728.2| Homo sapiens chromosome X clone RP4-646N3 map p11.4, complete sequence
          Length = 133506

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     cgcccctccttccccagcacccag 51
              |||||| |||||||||||||||||
Sbjct: 118141 cgccccgccttccccagcacccag 118118
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>emb|AL731555.10| Human DNA sequence from clone RP11-157J13 on chromosome 10 Contains a
              pseudogene similar to part of guanine nucleotide binding
              protein (G protein) alpha inhibiting activity (GNAI2) and a
              CpG island, complete sequence
          Length = 178389

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     cctccttccccagcacccag 51
              ||||||||||||||||||||
Sbjct: 154676 cctccttccccagcacccag 154657
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>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete
             sequence
          Length = 193801

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   aacctcctttccctcagcaa 471
             ||||||||||||||||||||
Sbjct: 36882 aacctcctttccctcagcaa 36901
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>emb|CR623767.1| full-length cDNA clone CS0DI071YM21 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1818

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1323 cgccccgccttccccagcacccag 1300
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>gb|AE005731.1| Caulobacter crescentus CB15 section 57 of 359 of the complete
           genome
          Length = 10180

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 ggaagccaccggcggcgcct 316
           ||||||||||||||||||||
Sbjct: 863 ggaagccaccggcggcgcct 844
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>emb|CR621138.1| full-length cDNA clone CS0DN003YE10 of Adult brain of Homo sapiens
            (human)
          Length = 1970

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1456 cgccccgccttccccagcacccag 1433
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>emb|CR610591.1| full-length cDNA clone CS0DI083YL02 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1951

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1489 cgccccgccttccccagcacccag 1466
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>emb|CR598612.1| full-length cDNA clone CS0DG005YI05 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 1866

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1349 cgccccgccttccccagcacccag 1326
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>emb|CR597771.1| full-length cDNA clone CS0DI067YJ24 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1536

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1041 cgccccgccttccccagcacccag 1018
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>emb|CR595671.1| full-length cDNA clone CS0DL002YA18 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1850

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1354 cgccccgccttccccagcacccag 1331
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>emb|CR594371.1| full-length cDNA clone CS0DB006YL01 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1824

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1349 cgccccgccttccccagcacccag 1326
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>emb|CR592650.1| full-length cDNA clone CS0DI062YK15 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1538

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1041 cgccccgccttccccagcacccag 1018
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>dbj|AK001248.1| Homo sapiens cDNA FLJ10386 fis, clone NT2RM2002142, weakly similar to
            GASTRULATION SPECIFIC PROTEIN G12
          Length = 1901

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1374 cgccccgccttccccagcacccag 1351
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>gb|AF487554.1| Homo sapiens fibroblast growth factor receptor 3 (FGFR3) gene, partial
             cds, alternatively spliced
          Length = 16976

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   gctgcaggggaaggtgaggt 242
             ||||||||||||||||||||
Sbjct: 12310 gctgcaggggaaggtgaggt 12291
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>gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, complete sequence
          Length = 189223

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    gctgcaggggaaggtgaggt 242
              ||||||||||||||||||||
Sbjct: 182721 gctgcaggggaaggtgaggt 182702
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>dbj|AB169884.1| Macaca fascicularis brain cDNA, clone: QnpA-14643, similar to human
            MID1 interacting G12-like protein (MIG12), mRNA, RefSeq:
            NM_021242.3
          Length = 2129

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1495 cgccccgccttccccagcacccag 1472
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>ref|NM_021242.3| Homo sapiens MID1 interacting protein 1 (gastrulation specific
            G12-like (zebrafish)) (MID1IP1), mRNA
          Length = 2372

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1827 cgccccgccttccccagcacccag 1804
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>gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosome 9, complete sequence
          Length = 152872

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     cccctccttccccagcaccc 49
              ||||||||||||||||||||
Sbjct: 118281 cccctccttccccagcaccc 118300
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>gb|AC181984.1| Pan troglodytes chromosome X clone CH251-244H4 map human ortholog p11.4,
              complete sequence
          Length = 184116

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     cgcccctccttccccagcacccag 51
              |||||| |||||||||||||||||
Sbjct: 166257 cgccccgccttccccagcacccag 166234
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>gb|AC022212.4|AC022212 Homo sapiens BAC clone RP11-708E9 from Xq23, complete sequence
          Length = 187313

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    cgcccctccttccccagcacccag 51
             |||||| |||||||||||||||||
Sbjct: 84141 cgccccgccttccccagcacccag 84118
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 120     ccgagtcccgcctctcggagctcg 143
               ||||||||||||||| ||||||||
Sbjct: 7618402 ccgagtcccgcctctgggagctcg 7618379
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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_C11
          Length = 124827

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   ccgagtcccgcctctcggagctcg 143
             ||||||||||||||| ||||||||
Sbjct: 41657 ccgagtcccgcctctgggagctcg 41634
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>emb|AL928595.15| Mouse DNA sequence from clone RP23-34C18 on chromosome 2, complete
             sequence
          Length = 135630

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 220   cctgctgcaggggaaggtgaggtg 243
             ||||||||||| ||||||||||||
Sbjct: 86419 cctgctgcaggtgaaggtgaggtg 86396
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>dbj|AK107692.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C01, full
           insert sequence
          Length = 758

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 ccgagtcccgcctctcggagctcg 143
           ||||||||||||||| ||||||||
Sbjct: 355 ccgagtcccgcctctgggagctcg 378
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>gb|AF050158.1|AF050158 Homo sapiens unknown mRNA, partial sequence
          Length = 747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 28  cgcccctccttccccagcacccag 51
           |||||| |||||||||||||||||
Sbjct: 200 cgccccgccttccccagcacccag 177
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>emb|AJ272057.1|HSA272057 Homo sapiens mRNA for hypothetical protein, clone STRAIT 11499
          Length = 1956

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   cgcccctccttccccagcacccag 51
            |||||| |||||||||||||||||
Sbjct: 1429 cgccccgccttccccagcacccag 1406
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>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete
             sequence
          Length = 212874

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cccctccttccccagcaccc 49
             ||||||||||||||||||||
Sbjct: 85680 cccctccttccccagcaccc 85699
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>emb|Y08099.1|HSFGFR316 H.sapiens FGFR3 gene, intron 16
          Length = 242

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 gctgcaggggaaggtgaggt 242
           ||||||||||||||||||||
Sbjct: 231 gctgcaggggaaggtgaggt 212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,562,111
Number of Sequences: 3902068
Number of extensions: 3562111
Number of successful extensions: 71783
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71495
Number of HSP's gapped (non-prelim): 288
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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