Clone Name | bart41d03 |
---|---|
Clone Library Name | barley_pub |
>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)| Length = 629 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2 Query: 498 NWSIIVKQQAREIGGRKESE*NCTKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 319 NWS + K +GG + NC + GK KAK + + + LN ++ ++L L LV Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497 Query: 318 RL 313 +L Sbjct: 498 QL 499
>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +1 Query: 253 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 366 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H| antigen) Length = 2115 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -2 Query: 549 SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCTKILNYGKGKAKNDIRM--A 376 ++ ++AEQ G E ERL + + Q +E G++E E L +G+A+ D+ + A Sbjct: 969 AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025 Query: 375 SSRSLNMQQKTSLRLQLVE 319 + L M+ + +L Q VE Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +1 Query: 556 MAAPTSAIGFEGYE 597 MAAP SAIGFEGYE Sbjct: 1 MAAPVSAIGFEGYE 14
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +1 Query: 343 SFLLHIQTARRSHPDIVFGFP 405 S LL TA R HPD VFGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96
>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein| Length = 90 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -1 Query: 490 DYREAASQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPP 329 D E SQ+ W W+K + ++ K + E +K Q D FFA EYA + PP Sbjct: 29 DIFEHISQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPP 88 Query: 328 A 326 A Sbjct: 89 A 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,329,769 Number of Sequences: 219361 Number of extensions: 1390026 Number of successful extensions: 3757 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3757 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)