ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41d03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 Score = 642 bits (324), Expect = 0.0 Identities = 377/392 (96%), Gaps = 2/392 (0%) Strand = Plus / Plus Query: 106 actcgtcgggagggctcgagatctgtgtcgggagaggggggaattcttgagatcggaacc 165 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| | Sbjct: 65 actcgtcgggagagctcgagatctgtgccgggagagggggga-ttcttgagatcggaatc 123 Query: 166 ggaacaagtgggcgcgctcgggaaggggttaccataccaatttttcccaggaacccttag 225 ||| |||| | ||||||||||||||||||||||||| ||| |||||||||||| |||||| Sbjct: 124 ggatcaagcgtgcgcgctcgggaaggggttaccataacaaattttcccaggaatccttag 183 Query: 226 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgt 285 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 184 tgaatgttctaatggagtcaaagggtggcaagaagtctagcagtagtagttccctgatgt 243 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 244 acgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgccaagaagt 303 Query: 346 tttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 405 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 304 tttctgctgcatactcaaactgcgcgaagaagccatcctgatatcgtttttggc-ttccc 362 Query: 406 cttcccgtagtttaggatttttgtgcaattttattctgactcttttctcccaccaatctc 465 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 363 cttcccgtagtttaggatttttatgcaattttattctgactcttttctcccaccaatctc 422 Query: 466 tctggcttgctgcttcacgataatcgaccagt 497 |||||||||||||||||||||||||||||||| Sbjct: 423 tctggcttgctgcttcacgataatcgaccagt 454 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 541 actcaaactgcaaacatggccgccccgacctctgcgatcgggtttgagggctacgaga 598 ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 498 actcaaactgcaacaatggctgccccggtctcagcgatcgggtttgagggctacgaga 555 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgcagcc 72 |||| ||||||||||||||||||||| Sbjct: 10 accgtctcgccgccgccaccgcagcc 35
>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence Length = 2057 Score = 194 bits (98), Expect = 2e-46 Identities = 175/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 288 |||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 217 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttccatgatgtatg 276 Query: 289 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 346 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 277 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 336 Query: 347 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 405 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 337 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 396 Query: 406 cttcccgtagtttaggattt 425 ||| |||||||||||||| Sbjct: 397 attctagtagtttaggattt 416 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 457 accaatctctctggcttgctgcttcacgataatcgaccagt 497 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 439 accaatctctctggcctgctgcttcctgataatcgaccagt 479
>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase Length = 1873 Score = 186 bits (94), Expect = 6e-44 Identities = 174/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 288 |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| | Sbjct: 38 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 97 Query: 289 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 346 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 98 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 157 Query: 347 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 405 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 158 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 217 Query: 406 cttcccgtagtttaggattt 425 ||| |||||||||||||| Sbjct: 218 attctagtagtttaggattt 237 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 457 accaatctctctggcttgctgcttcacgataatcgaccagt 497 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 260 accaatctctctggcctgctgcttcctgataatcgaccagt 300
>gb|AY103590.1| Zea mays PCO098412 mRNA sequence Length = 2400 Score = 186 bits (94), Expect = 6e-44 Identities = 174/200 (87%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 288 |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| | Sbjct: 287 atgtactaatggagtctaagggtggcaaaaagtctagcagtagtcgttctatgatgtatg 346 Query: 289 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 346 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 347 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 406 Query: 347 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 405 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 407 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 466 Query: 406 cttcccgtagtttaggattt 425 ||| |||||||||||||| Sbjct: 467 attctagtagtttaggattt 486 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 457 accaatctctctggcttgctgcttcacgataatcgaccagt 497 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 509 accaatctctctggcctgctgcttcctgataatcgaccagt 549
>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence Length = 1866 Score = 178 bits (90), Expect = 1e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Minus Query: 229 atgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatgtacg 288 |||| ||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| | Sbjct: 1860 atgtactaatggagtctaagggtggcataaagactagcagtagtcgttccatgatgtatg 1801 Query: 289 aagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaagaagtt-- 346 |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 1800 aagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaagaagttcc 1741 Query: 347 -ttctgctgcatattcaaactgcgcgaagaagccatcctgatatcgtttttggctttccc 405 |||||||| || || |||||||||||||||||||||||||||| ||||||||| | | Sbjct: 1740 agtctgctgcttactccaactgcgcgaagaagccatcctgatatcccttttggcttcctc 1681 Query: 406 cttcccgtagtttaggattt 425 ||| |||||||||||||| Sbjct: 1680 attctagtagtttaggattt 1661 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 457 accaatctctctggcttgctgcttcacgataatcgaccagt 497 ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1638 accaatctctctggcctgctgcttcctgataatcgaccagt 1598
>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase Length = 2036 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 192 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 251 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 252 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 311 Query: 341 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 388 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 312 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 362
>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full insert sequence Length = 2063 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 341 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 388 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full insert sequence Length = 2059 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 341 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 388 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full insert sequence Length = 2711 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 341 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 388 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full insert sequence Length = 2063 Score = 165 bits (83), Expect = 2e-37 Identities = 150/171 (87%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 236 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 295 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 296 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 355 Query: 341 gaagtt---ttctgctgcatattcaaactgcgcgaagaagccatcctgata 388 |||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 356 gaagttccagtctgctgcttactccaactgcgcgaagaagccatcctgata 406
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 12050 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12109 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 12110 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12169 Query: 341 gaagtt 346 |||||| Sbjct: 12170 gaagtt 12175 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tgcgcgaagaagccatcctgata 388 ||||||||||||||||||||||| Sbjct: 12281 tgcgcgaagaagccatcctgata 12303
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 24891465 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 24891524 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 24891525 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 24891584 Query: 341 gaagtt 346 |||||| Sbjct: 24891585 gaagtt 24891590 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tgcgcgaagaagccatcctgata 388 ||||||||||||||||||||||| Sbjct: 24891696 tgcgcgaagaagccatcctgata 24891718
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 12079 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 12138 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 12139 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 12198 Query: 341 gaagtt 346 |||||| Sbjct: 12199 gaagtt 12204 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tgcgcgaagaagccatcctgata 388 ||||||||||||||||||||||| Sbjct: 12310 tgcgcgaagaagccatcctgata 12332
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 135 bits (68), Expect = 2e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 153181 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 153240 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 153241 gatgtatgaagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 153300 Query: 341 gaagtt 346 |||||| Sbjct: 153301 gaagtt 153306 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tgcgcgaagaagccatcctgata 388 ||||||||||||||||||||||| Sbjct: 153412 tgcgcgaagaagccatcctgata 153434
>emb|AJ252213.1|OSA252213 Oryza sativa partial adometDC1 gene for S-adenosylmethionine decarboxylase 1, exons 1-3 Length = 2036 Score = 127 bits (64), Expect = 5e-26 Identities = 111/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| | Sbjct: 1097 agtggatgtactaatggagtcaaagggtggcaaaaagaagtctagcagtagtcgttcctt 1156 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaaa 340 |||||| | ||||||||| |||||||||||||| ||||||||||| || ||||||| || Sbjct: 1157 gatgtatgtagctccccttggctacagcattgaggacgttcgacctgccggaggcgtgaa 1216 Query: 341 gaagtt 346 |||||| Sbjct: 1217 gaagtt 1222 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tgcgcgaagaagccatcctgata 388 ||||||||||||||||||||||| Sbjct: 1328 tgcgcgaagaagccatcctgata 1350
>gb|BT013082.1| Lycopersicon esculentum clone 114340R, mRNA sequence Length = 380 Score = 117 bits (59), Expect = 4e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 225 gtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctg 281 ||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||||| | Sbjct: 152 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 211 Query: 282 atgtacgaagctcccctcggctacagcattgaagacgttcgacca 326 | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 ttttacgaagctcccctcggctacagcattgaagacgttcgacca 256
>gb|AY103940.1| Zea mays PCO064624 mRNA sequence Length = 2008 Score = 109 bits (55), Expect = 1e-20 Identities = 143/171 (83%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 226 tgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---c 279 ||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| | Sbjct: 208 tgaatgttctaatggagtccaagggtggcaagaagaagtctagcagtagtcgttcctccc 267 Query: 280 tgatgtacgaagctcccctcggctacagcattgaagacgttcgaccagctggaggcgcaa 339 ||||||||||||||||||| ||||||||||| || || | || || || || ||| | Sbjct: 268 tgatgtacgaagctccccttggctacagcatcgaggatatccgccctgcaggcggcatca 327 Query: 340 agaagttttctgctgcatattcaaactgcgcgaagaagccatcctgatatc 390 ||||||| || ||||| || || |||||||||| ||||||||||||||||| Sbjct: 328 agaagttctccgctgcttactcgaactgcgcgaggaagccatcctgatatc 378
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 15332978 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 15332922 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 15332921 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 15332873 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 8613491 cgcctcgccgccgccaccgc 8613472 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 2539236 cgcctcgccgccgccaccgc 2539255
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Minus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 112167 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 112111 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 112110 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 112062
>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 gene for S-adenosylmethionine decarboxylase, complete cds Length = 2952 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 1014 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 1070 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 1071 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 1119
>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full insert sequence Length = 2047 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322
>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full insert sequence Length = 2002 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 218 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 274 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 275 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 323
>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full insert sequence Length = 2546 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 743 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 799 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 800 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 848
>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full insert sequence Length = 2034 Score = 105 bits (53), Expect = 2e-19 Identities = 96/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 229 atgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgt 285 ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| Sbjct: 217 atgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttcc---atgt 273 Query: 286 acgaagctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||||||| ||||||| ||||| |||||||| ||||| ||||| Sbjct: 274 acgaagctcccctaggctacaagattgaggacgttcgcccagccggagg 322
>ref|XM_506863.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.33 mRNA Length = 1982 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 291 gaagctcccctcggctacagcattga 316
>emb|Y07768.1|DSSADMEDC D.stramonium mRNA for S-adenosylmethionine decarboxylase Length = 1839 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 225 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagttccctgatg 284 ||||||| ||||||||||||||| ||||| |||||| |||||||||||| | | Sbjct: 133 gtgaatgatctaatggagtcaaaaggtgggaaaaagaagtctagtagtagttccttattt 192 Query: 285 tacgaagctcccctcggctacagcattgaagacgttcgacca 326 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tacgaagctcccctcggctacagcattgaagacgttcgacca 234
>emb|AJ251899.1|OSA251899 Oryza sativa mRNA for S-adenosylmethionine decarboxylase 2 (adometDC2 gene) Length = 1971 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 217 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 276 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 277 gaagctcccctcggctacagcattga 302
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 24065827 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24065886 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 24065887 gaagctcccctcggctacagcattga 24065912
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 24568 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 24627 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 24628 gaagctcccctcggctacagcattga 24653
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 100865 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 100924 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 100925 gaagctcccctcggctacagcattga 100950
>emb|AJ252214.1|OSA252214 Oryza sativa partial adometDC2 gene for S-adenosylmethionine decarboxylase 2, exons 1-3 Length = 1721 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 1129 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 1188 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 1189 gaagctcccctcggctacagcattga 1214
>dbj|AK070269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047N04, full insert sequence Length = 1182 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 228 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 287 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 288 gaagctcccctcggctacagcattga 313
>dbj|AK070259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041P13, full insert sequence Length = 1982 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtac 287 ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 231 ctaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtac 290 Query: 288 gaagctcccctcggctacagcattga 313 |||||||||||||||||||||||||| Sbjct: 291 gaagctcccctcggctacagcattga 316
>ref|XM_466676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 95.6 bits (48), Expect = 2e-16 Identities = 76/84 (90%), Gaps = 6/84 (7%) Strand = Plus / Plus Query: 236 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 289 ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60 Query: 290 agctcccctcggctacagcattga 313 |||||||||||||||||||||||| Sbjct: 61 agctcccctcggctacagcattga 84
>dbj|AK062133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E08, full insert sequence Length = 1750 Score = 95.6 bits (48), Expect = 2e-16 Identities = 76/84 (90%), Gaps = 6/84 (7%) Strand = Plus / Plus Query: 236 aatggagtcaaagggtggcaaaaag---tctagcagtagtagttcc---ctgatgtacga 289 ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 1 aatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacga 60 Query: 290 agctcccctcggctacagcattga 313 |||||||||||||||||||||||| Sbjct: 61 agctcccctcggctacagcattga 84
>gb|AY536644.1| Brassica juncea S-adenosylmethionine decarboxylase (SAMDC4) mRNA, complete cds Length = 1705 Score = 93.7 bits (47), Expect = 6e-16 Identities = 79/89 (88%), Gaps = 3/89 (3%) Strand = Plus / Plus Query: 237 atggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaagct 293 ||||||||||| ||||| |||||| |||||||||||||||||| | | ||||||||| Sbjct: 139 atggagtcaaaaggtggtaaaaagaagtctagcagtagtagttccttattttacgaagct 198 Query: 294 cccctcggctacagcattgaagacgttcg 322 |||||||| |||||||||||||||||||| Sbjct: 199 cccctcggttacagcattgaagacgttcg 227
>gb|AF321141.1|AF321141S1 Nicotiana tabacum S-adenosylmethionine decarboxylase mRNA, partial cds Length = 639 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 266 cagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagacgttcgacc 325 ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 cagtagtagttccttattttacgaagctcccctcggctacagcattgaagacgttcgacc 81 Query: 326 a 326 | Sbjct: 82 a 82
>gb|AY232672.1| Narcissus pseudonarcissus S-adenosylmethionine decarboxylase (SAMdc) mRNA, complete cds Length = 1812 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 182 aagtctagcagtagtaattccatgcaatacgaagctcccctcggctacagcattgaagac 241 Query: 318 gttcg 322 ||||| Sbjct: 242 gttcg 246
>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA, complete cds Length = 1386 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 541 actcaaactgcaaacatggccgccccgacctctgcgatcgggtttgagggctacgaga 598 |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 actcgaactgcaacaatggctgccccgacctctgcgatcgggtttgagggctacgaga 118
>ref|NM_001035545.1| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase AT3G02470 (SAMDC) transcript variant AT3G02470.2 mRNA, complete cds Length = 2061 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 422 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 481 Query: 318 gttcg 322 ||||| Sbjct: 482 gttcg 486
>ref|NM_111114.2| Arabidopsis thaliana SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase AT3G02470 (SAMDC) transcript variant AT3G02470.1 mRNA, complete cds Length = 1953 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 329 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 388 Query: 318 gttcg 322 ||||| Sbjct: 389 gttcg 393
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 |||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||| Sbjct: 107086 aagtctagcagtagtaaatccttattctacgaagctcccctcggctacagcattgaagac 107145 Query: 318 gttcg 322 ||||| Sbjct: 107146 gttcg 107150
>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete sequence Length = 103904 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 25483 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 25542 Query: 318 gttcg 322 ||||| Sbjct: 25543 gttcg 25547
>emb|Y07765.1|ATSADMEDC A.thaliana gene encoding S-adenosylmethionine decarboxylase Length = 2369 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 720 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 779 Query: 318 gttcg 322 ||||| Sbjct: 780 gttcg 784
>gb|AF428468.1|AF428468 Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds Length = 1807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 318 gttcg 322 ||||| Sbjct: 316 gttcg 320
>gb|AY054185.1| Arabidopsis thaliana AT3g02470/F16B3_10 mRNA, complete cds Length = 1781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 318 gttcg 322 ||||| Sbjct: 316 gttcg 320
>gb|AY042824.1| Arabidopsis thaliana S-adenosylmethionine decarboxylase (F16B3.10) mRNA, complete cds Length = 1876 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 256 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 315 Query: 318 gttcg 322 ||||| Sbjct: 316 gttcg 320
>gb|U63633.1|ATU63633 Arabidopsis thaliana S-adenosylmethionine decarboxylase (SAMdc) mRNA, complete cds Length = 1823 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 258 aagtctagcagtagtagttccctgatgtacgaagctcccctcggctacagcattgaagac 317 ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 247 aagtccagcagtagtagttccttattttacgaagctcccctcggttacagcattgaagac 306 Query: 318 gttcg 322 ||||| Sbjct: 307 gttcg 311
>gb|AY730047.1| Phaseolus vulgaris putative SAMDC uORF mRNA, complete cds Length = 162 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcgacca 326 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58 tacgaagctcccctcggctacagcattgaagacattcgacca 99
>gb|S74514.1| S-adenosylmethionine decarboxylase [Solanum tuberosum=potatoes, cv. Desiree, Genomic, 2904 nt] Length = 2904 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/106 (84%), Gaps = 4/106 (3%) Strand = Plus / Plus Query: 225 gtgaatgttctaatggagtcaaagggtggcaaa---aagtctagcagtagtagttccctg 281 ||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||||| | Sbjct: 1101 gtgaatgatctaatggagtcaaaaggtggtaaaaagaagtctagtagtagtagttcctta 1160 Query: 282 atgtacg-aagctcccctcggctacagcattgaagacgttcgacca 326 | |||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 1161 ttttacgtaagctcccctcggcatcagcattagagacgttcgacca 1206
>dbj|AB077442.2| Malus x domestica SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds, clone:MdSAMDC2 Length = 1938 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/89 (85%), Gaps = 3/89 (3%) Strand = Plus / Plus Query: 234 ctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccctgatgtacgaa 290 ||||||||||| || |||||||||||| ||||| ||||||| || || | |||||| Sbjct: 251 ctaatggagtccaaaggtggcaaaaaggattctagtagtagtaaatcattgttctacgaa 310 Query: 291 gctcccctcggctacagcattgaagacgt 319 ||||||||||| ||||||||||||||||| Sbjct: 311 gctcccctcggttacagcattgaagacgt 339
>gb|AY491510.2| Daucus carota S-adenosylmethionine decarboxylase (samdc1) gene, complete cds Length = 2849 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/103 (83%), Gaps = 9/103 (8%) Strand = Plus / Plus Query: 226 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagt------agtagt---t 276 ||||||||||||||||| |||| ||||| ||||||||||| ||| |||||| | Sbjct: 1126 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagtagtagtaaat 1185 Query: 277 ccctgatgtacgaagctcccctcggctacagcattgaagacgt 319 || || | ||||||||||||||||| ||||||||||||||||| Sbjct: 1186 ccttgttctacgaagctcccctcggatacagcattgaagacgt 1228
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||||||||||||| |||||||||||||||||||| Sbjct: 111914 tacgaagctcccctcggttacagcattgaagacgttcg 111951 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 571 tctgcgatcgggtttgagggctacgaga 598 ||||||||||| ||||| |||||||||| Sbjct: 112272 tctgcgatcggatttgaaggctacgaga 112299
>gb|AY491511.1| Daucus carota S-adenosylmethionine decarboxylase (samdc2) gene, complete cds Length = 2843 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 226 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 275 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||| Sbjct: 1124 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 1173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgt 319 ||||||||||||||||| ||||||||||||||||| Sbjct: 1192 tacgaagctcccctcggatacagcattgaagacgt 1226
>emb|X95729.1|BJSAMDC1G B.juncea mRNA for S-adenosylmethionine decarboxylase Length = 1653 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||||||||||||| |||||||||||||||||||| Sbjct: 201 tacgaagctcccctcggttacagcattgaagacgttcg 238
>gb|AF488307.1| Glycine max S-adenosylmethionine decarboxylase (SAMDC) mRNA, complete cds Length = 1824 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcgacca 326 ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 278 tacgaagctcccctcggatacagcattgaagacgttagacca 319
>gb|AF420239.1|AF420239 Dendrobium crumenatum S-adenosyl-L-methionine decarboxylase (Samdc) mRNA, complete cds Length = 1894 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||| |||||||||||||||||||||||||||||| Sbjct: 272 tacgaagttcccctcggctacagcattgaagacgttcg 309
>gb|AY444341.1| Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC2) gene, complete cds Length = 4456 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||||||||||||| |||||||||||||||||||| Sbjct: 2891 tacgaagctcccctcggttacagcattgaagacgttcg 2928
>gb|AF334029.1|AF334029 Daucus carota S-adenosyl-methionine decarboxylase (SAMDC) mRNA, complete cds Length = 1761 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 226 tgaatgttctaatggagtcaaagggtggcaaaaagtctagcagtagtagt 275 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||| Sbjct: 139 tgaatgttctaatggagacaaaaggtgggaaaaagtctagtagtagtagt 188 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgt 319 ||||||||||||||||| ||||||||||||||||| Sbjct: 207 tacgaagctcccctcggatacagcattgaagacgt 241
>gb|AF215665.1|AF215665 Brassica juncea S-adenosyl-L-methionine decarboxylase (SAMDC3) mRNA, complete cds Length = 1743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||||||||||||| |||||||||||||||||||| Sbjct: 233 tacgaagctcccctcggttacagcattgaagacgttcg 270
>gb|U80916.1|BJU80916 Brassica juncea S-adenosyl-L-methionine decarboxylase mRNA, complete cds Length = 1676 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 ||||||||||||||||| |||||||||||||||||||| Sbjct: 194 tacgaagctcccctcggttacagcattgaagacgttcg 231
>dbj|AB062360.1| Phaseolus lunatus SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds Length = 1518 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcgacca 326 |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 2 tacgaagctcccctcggctatagcattgaagacattcgacca 43
>gb|U12573.1|CRU12573 Catharanthus roseus S-adenosyl-L-methionine decarboxylase proenzyme mRNA, complete cds Length = 1864 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/99 (83%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 224 agtgaatgttctaatggagtcaaagggtggcaaaaag---tctagcagtagtagttccct 280 |||||||| |||||||||||| || ||||| || ||| ||||| ||||||| ||| | Sbjct: 147 agtgaatgatctaatggagtctaaaggtgggaagaagaagtctagtagtagtaaatcctt 206 Query: 281 gatgtacgaagctcccctcggctacagcattgaagacgt 319 | ||||||||||||||||| ||||||||||||||||| Sbjct: 207 attctacgaagctcccctcggatacagcattgaagacgt 245
>emb|AJ704800.1| Prunus persica partial samdc gene for S-adenosylmethionine decarboxylase, exons 1-3 Length = 1189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgt 319 ||||||||||||||||| ||||||||||||||||| Sbjct: 52 tacgaagctcccctcggttacagcattgaagacgt 86
>gb|AF033100.1|AF033100 Nicotiana tabacum S-adenosylmethionine decarboxylase gene, complete cds Length = 2325 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| |||||||||||||| |||||||||||||| Sbjct: 337 tacgaagcacccctcggctacagtattgaagacgttcg 374
>gb|AY104070.1| Zea mays PCO115703 mRNA sequence Length = 2000 Score = 54.0 bits (27), Expect = 5e-04 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 233 tctaatggagtcaaagggtggcaaaaagtctagcagtagta---gttccctgatgtacga 289 |||||||||||| || |||||||| |||||||| ||||||| || | |||||||| Sbjct: 178 tctaatggagtcgaaaggtggcaagaagtctagtagtagtaatagtaatttcatgtacga 237 Query: 290 agctcccctcggctacagcattgaagacgttcgaccagctggagg 334 ||||||||| ||||||| || || |||||||| ||||| ||||| Sbjct: 238 agctccccttggctacaagatcgaggacgttcgcccagccggagg 282
>ref|NM_001036811.1| Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950 transcript variant AT5G15950.2 mRNA, complete cds Length = 1881 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 328 tacgaagcaccccttggttacagcattgaagacgttcg 365
>ref|NM_121600.2| Arabidopsis thaliana adenosylmethionine decarboxylase AT5G15950 transcript variant AT5G15950.1 mRNA, complete cds Length = 1748 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 244 tacgaagcaccccttggttacagcattgaagacgttcg 281
>gb|BT013281.1| Lycopersicon esculentum clone 134862F, mRNA sequence Length = 1812 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcgacca 326 |||||||||||||| || |||| |||||||||||||||||| Sbjct: 258 tacgaagctcccctaggttacactattgaagacgttcgacca 299
>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project) Length = 74687 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 25193 tacgaagcaccccttggttacagcattgaagacgttcg 25230
>emb|AJ252212.1|ATH252212 Arabidopsis thaliana adometDC2 gene for S-adenosylmethionine decarboxylase, exons 1-3 Length = 2072 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 651 tacgaagcaccccttggttacagcattgaagacgttcg 688
>emb|AJ251915.1|ATH251915 Arabidopsis thaliana mRNA for S-adenosylmethionine decarboxylase (adoMetDC2 gene)and ORF Length = 1723 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 234 tacgaagcaccccttggttacagcattgaagacgttcg 271
>gb|U60592.1|PSU60592 Pisum sativum putative ORF; conserved in 5' leaders of plant SAMdC and S-adenosylmethionine decarboxylase mRNAs, complete cds Length = 1829 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| |||||||| ||||||||||||||| |||| Sbjct: 262 tacgaagcccccctcggatacagcattgaagacattcg 299
>gb|AF436825.1|AF436825 Arabidopsis thaliana AT5g15950/F1N13_90 mRNA, complete cds Length = 1728 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 285 tacgaagctcccctcggctacagcattgaagacgttcg 322 |||||||| ||||| || |||||||||||||||||||| Sbjct: 245 tacgaagcaccccttggttacagcattgaagacgttcg 282
>gb|U38527.1|DCU38527 Dianthus caryophyllus S-adenosylmethionine 2 decarboxylase mRNA, complete cds Length = 1829 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 297 ctcggctacagcattgaagacgttcgacca 326 ||||||||||||||||||||| |||||||| Sbjct: 222 ctcggctacagcattgaagaccttcgacca 251
>emb|AJ567368.2|VVI567368 Vitis vinifera samdc gene for S-adenosylmethionine decarboxylase proenzyme, mRNA Length = 1709 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 288 gaagctcccctcggctacagcattgaagacgttcgacc 325 |||||||| || |||||||||||||||||| ||||||| Sbjct: 144 gaagctcctcttggctacagcattgaagacattcgacc 181
>gb|BT013882.1| Lycopersicon esculentum clone 132862F, mRNA sequence Length = 1849 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 288 gaagctcccctcggctacagcattgaagacgttcgacca 326 ||||| ||||| |||||||| |||||||||||| ||||| Sbjct: 213 gaagcaccccttggctacagtattgaagacgttagacca 251 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 225 gtgaatgttctaatggagtcaaagggtggcaaaaagtctagcagta 270 ||||||| |||||||||||| || ||||| || |||||||| |||| Sbjct: 153 gtgaatgatctaatggagtctaaaggtgggaagaagtctagtagta 198
>dbj|AB077441.2| Malus x domestica SAMDC mRNA for S-adenosylmethionine decarboxylase, complete cds, clone:MdSAMDC1 Length = 1875 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 237 atggagtcaaagggtggcaaaaagtctagcagtagtagt 275 |||||||| || ||||| ||||||||||| ||||||||| Sbjct: 159 atggagtccaaaggtggtaaaaagtctagtagtagtagt 197
>gb|U94786.1|DCU94786 Dianthus caryophyllus S-adenosylmethionine decarboxylase (gcsdc9) gene, complete cds Length = 4311 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 291 gctcccctcggctacagcattgaagacgttcgacc 325 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 2692 gctccactcggttacagcattgaggacgttcgacc 2726
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 67986 accgcctcgccgccgccaccgc 68007
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 201743 accgcctcgccgccgccaccgc 201722
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 61842 accgcctcgccgccgccaccgc 61863
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 1968965 accgcctcgccgccgccaccgc 1968986 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tcgccgccgccaccgcagcc 72 |||||||||||||||||||| Sbjct: 5915506 tcgccgccgccaccgcagcc 5915487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 4756299 cgcctcgccgccgccaccgc 4756280 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 4645666 cgcctcgccgccgccaccgc 4645685
>dbj|AK102034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081B21, full insert sequence Length = 1312 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 678 accgcctcgccgccgccaccgc 699
>dbj|AK099362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I06, full insert sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 709 accgcctcgccgccgccaccgc 730
>emb|CT573229.8| Zebrafish DNA sequence from clone DKEY-11D7 in linkage group 1, complete sequence Length = 146843 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 ttttctgctgcatattcaaact 366 |||||||||||||||||||||| Sbjct: 46886 ttttctgctgcatattcaaact 46907
>dbj|AK064360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B09, full insert sequence Length = 1365 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 708 accgcctcgccgccgccaccgc 729
>tpe|BN000595.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx66 gene for class III peroxidase 66, exons 1-2 Length = 1925 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 accgcctcgccgccgccaccgc 68 |||||||||||||||||||||| Sbjct: 1495 accgcctcgccgccgccaccgc 1516
>emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chromosome 1q25.1-31.1 Contains the 3' end of the C1orf16 gene for chromosome 1 open reading frame 16, the NCF2 gene for neutrophil cytosolic factor 2 (65kDa, chronic granulomatous disease, autosomal 2), a novel gene, the ARPC5 gene for actin related protein 2/3 complex subunit 5 (16kDa), the 5' end of the RGL1 gene for ral guanine nucleotide dissociation stimulator-like 1, a novel gene (MGC26594) and a CpG island, complete sequence Length = 185832 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 caattttattctgactctttt 451 ||||||||||||||||||||| Sbjct: 5443 caattttattctgactctttt 5463
>gb|AY741575.1| Uncultured sulfate-reducing bacterium clone PIMO3E11 dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1848 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 aatctctctggcttgctgctt 480 ||||||||||||||||||||| Sbjct: 1629 aatctctctggcttgctgctt 1649
>dbj|AK016582.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932703K07 product:unclassifiable, full insert sequence Length = 1166 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ccgcctcgccgccgccaccgc 68 ||||||||||||||||||||| Sbjct: 84 ccgcctcgccgccgccaccgc 104
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ccgcctcgccgccgccaccgcagcc 72 |||||||||||||||| |||||||| Sbjct: 17555795 ccgcctcgccgccgccgccgcagcc 17555819
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccgcctcgccgccgccaccgc 68 ||||||||||||||||||||| Sbjct: 108600 ccgcctcgccgccgccaccgc 108580
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ccgcctcgccgccgccaccgcagcc 72 |||||||||||||||| |||||||| Sbjct: 17510166 ccgcctcgccgccgccgccgcagcc 17510190
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ccgcctcgccgccgccaccgcagcc 72 |||||||||||||||| |||||||| Sbjct: 48131 ccgcctcgccgccgccgccgcagcc 48155
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 1212 cgcctcgccgccgccaccgc 1231
>ref|NM_113454.2| Arabidopsis thaliana adenosylmethionine decarboxylase AT3G25570 mRNA, complete cds Length = 1527 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 tacagcattgaagacgttcgacca 326 |||||||||||||||||| ||||| Sbjct: 79 tacagcattgaagacgttagacca 102
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgtcgggagggctcgaga 126 |||||||||||||||||||| Sbjct: 42838 ctcgtcgggagggctcgaga 42857
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tctctctggcttgctgcttc 481 |||||||||||||||||||| Sbjct: 59726 tctctctggcttgctgcttc 59707
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ctcgtcgggagggctcgaga 126 |||||||||||||||||||| Sbjct: 20409 ctcgtcgggagggctcgaga 20390
>gb|AY022835.1| Oryza sativa microsatellite MRG5160 containing (CGC)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cctcgccgccgccaccgcag 70 |||||||||||||||||||| Sbjct: 148 cctcgccgccgccaccgcag 167
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tcgccgccgccaccgcagcc 72 |||||||||||||||||||| Sbjct: 53080 tcgccgccgccaccgcagcc 53061
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 ||||||||||||||| |||||||| Sbjct: 117156 cgcctcgccgccgccgccgcagcc 117133
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 156133 cgcctcgccgccgccaccgc 156152
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 22669 cgcctcgccgccgccaccgc 22650
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 ||||||||||||||| |||||||| Sbjct: 50137 cgcctcgccgccgccgccgcagcc 50114
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 21329758 cgcctcgccgccgccaccgc 21329739
>gb|AY339884.1| Zea mays WD40 repeat protein (mp1) gene, complete cds Length = 2965 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 1537 cgcctcgccgccgccaccgc 1518
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 attttattctgactcttttc 452 |||||||||||||||||||| Sbjct: 43595 attttattctgactcttttc 43614
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 attttattctgactcttttc 452 |||||||||||||||||||| Sbjct: 86873 attttattctgactcttttc 86892
>ref|NM_031220.1| Homo sapiens PITPNM family member 3 (PITPNM3), mRNA Length = 3109 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 |||||||| ||||||||||||||| Sbjct: 32 cgcctcgctgccgccaccgcagcc 9
>emb|Z82204.1|HS362G17 Human DNA sequence from clone RP3-362G17 on chromosome X Contains part of the FGF13 gene for fibroblast growth factor 13, complete sequence Length = 75145 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 caaagaagttttctgctgca 356 |||||||||||||||||||| Sbjct: 32059 caaagaagttttctgctgca 32078
>emb|AL356785.18| Human DNA sequence from clone RP13-206I21 on chromosome Xp11.3-21.1 Contains part of the ATP11C gene for ATPase, Class VI, type 11C (ATPIG, ATPIQ), complete sequence Length = 165572 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tttgtgcaattttattctga 444 |||||||||||||||||||| Sbjct: 129936 tttgtgcaattttattctga 129917
>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence Length = 170361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctctctggcttgctgcttc 481 |||||||||||||||||||| Sbjct: 10144 tctctctggcttgctgcttc 10163
>emb|CR354591.13| Zebrafish DNA sequence from clone DKEY-18L4 in linkage group 24, complete sequence Length = 218314 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 atttttgtgcaattttattc 441 |||||||||||||||||||| Sbjct: 161163 atttttgtgcaattttattc 161144
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 124304 cgcctcgccgccgccaccgc 124285 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 15009 cgcctcgccgccgccaccgc 15028
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aaaaagtctagcagtagtag 274 |||||||||||||||||||| Sbjct: 22368 aaaaagtctagcagtagtag 22349
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcgccgccgccaccgcag 70 |||||||||||||||||||| Sbjct: 52613 cctcgccgccgccaccgcag 52594
>gb|AC073427.7| Homo sapiens BAC clone RP11-746K19 from 4, complete sequence Length = 157152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 ggatttttgtgcaattttat 439 |||||||||||||||||||| Sbjct: 13130 ggatttttgtgcaattttat 13111
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 ||||||||||||||| |||||||| Sbjct: 1978582 cgcctcgccgccgccgccgcagcc 1978559
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcgccgccgccaccgcag 70 |||||||||||||||||||| Sbjct: 22048069 cctcgccgccgccaccgcag 22048050
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgtcgggagggctcgaga 126 |||||||||||||||||||| Sbjct: 12373426 ctcgtcgggagggctcgaga 12373445
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 21322787 cgcctcgccgccgccaccgc 21322768
>emb|BX823121.1|CNS0A7A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1700 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 tacagcattgaagacgttcgacca 326 |||||||||||||||||| ||||| Sbjct: 282 tacagcattgaagacgttagacca 305
>gb|AF334586.1|AF334586 Homo sapiens NIR1 mRNA, complete cds Length = 3109 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 |||||||| ||||||||||||||| Sbjct: 32 cgcctcgctgccgccaccgcagcc 9
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 134701 cgcctcgccgccgccaccgc 134682
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 125826 cgcctcgccgccgccaccgc 125845
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 43287 cgcctcgccgccgccaccgc 43268
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgtcgggagggctcgaga 126 |||||||||||||||||||| Sbjct: 132075 ctcgtcgggagggctcgaga 132094
>dbj|AB178778.1| Mycobacterium sp. Thai4 genes for 16S rRNA, internal transcribed spacer, 23S rRNA, partial and complete sequence Length = 430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tttttgtgcaattttattct 442 |||||||||||||||||||| Sbjct: 373 tttttgtgcaattttattct 392
>dbj|AB178776.1| Mycobacterium sp. Thai3 genes for 16S rRNA, internal transcribed spacer, 23S rRNA, partial and complete sequence Length = 430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tttttgtgcaattttattct 442 |||||||||||||||||||| Sbjct: 373 tttttgtgcaattttattct 392
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tacagcattgaagacgttcgacca 326 |||||||||||||||||| ||||| Sbjct: 75562 tacagcattgaagacgttagacca 75539
>dbj|AK121556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033I04, full insert sequence Length = 1815 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 28 cgcctcgccgccgccaccgc 47
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 attttattctgactcttttc 452 |||||||||||||||||||| Sbjct: 118579 attttattctgactcttttc 118560
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 attttattctgactcttttc 452 |||||||||||||||||||| Sbjct: 115766 attttattctgactcttttc 115747
>dbj|AK106389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E10, full insert sequence Length = 2058 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tcgccgccgccaccgcagcc 72 |||||||||||||||||||| Sbjct: 1369 tcgccgccgccaccgcagcc 1388
>dbj|AK105900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F08, full insert sequence Length = 1399 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 194 cgcctcgccgccgccaccgc 213
>dbj|AK067998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127N17, full insert sequence Length = 2575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cctcgccgccgccaccgcag 70 |||||||||||||||||||| Sbjct: 105 cctcgccgccgccaccgcag 124
>dbj|AK065299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N17, full insert sequence Length = 2760 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 82 cgcctcgccgccgccaccgc 101
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcgccgccgccaccgcag 70 |||||||||||||||||||| Sbjct: 22059732 cctcgccgccgccaccgcag 22059713
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgcagcc 72 ||||||||||||||| |||||||| Sbjct: 1986363 cgcctcgccgccgccgccgcagcc 1986340
>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b, complete sequence Length = 84914 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 283 tgtacgaagctcccctcggctacagcattgaagacgttcgacca 326 |||| |||||||| |||| |||| |||||||||||||||||| Sbjct: 49422 tgtatgaagctcctctcgattacataattgaagacgttcgacca 49379
>gb|L42261.1|MSGRGDGD Mycobacterium gordonae 16S ribosomal RNA (16S rRNA) gene and 23S ribosomal RNA (23S rRNA) gene Length = 430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tttttgtgcaattttattct 442 |||||||||||||||||||| Sbjct: 373 tttttgtgcaattttattct 392
>gb|L42260.1|MSGRGDGC Mycobacterium gordonae 23S ribosomal RNA (23S rRNA) gene and 16S ribosomal RNA (16S rRNA) gene Length = 430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tttttgtgcaattttattct 442 |||||||||||||||||||| Sbjct: 373 tttttgtgcaattttattct 392
>emb|AJ315575.1|MGO315575 Mycobacterium gordonae internal transcribed spacer 1 (ITS1), isolate C55 Length = 271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tttttgtgcaattttattct 442 |||||||||||||||||||| Sbjct: 236 tttttgtgcaattttattct 255
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgcctcgccgccgccaccgc 68 |||||||||||||||||||| Sbjct: 28707 cgcctcgccgccgccaccgc 28688 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,051,441 Number of Sequences: 3902068 Number of extensions: 4051441 Number of successful extensions: 94562 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92749 Number of HSP's gapped (non-prelim): 1749 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
