>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion|
           degradation protein 2) (Homozygously deleted in
           neuroblastoma 1)
          Length = 1302

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +2

Query: 185 ESAQKP*PA--AQLPMAGNSNPSPSAGGD---VPTPALPPVRLAAGQAATIQPSSPRY 343
           ES+  P P+  + +P+ G S  SPS       VP+  L P   A+G AA  QPSSPRY
Sbjct: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRY 330

>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID|
            domain-containing protein 1A) (SWI/SNF-related,
            matrix-associated, actin-dependent regulator of chromatin
            subfamily F member 1) (SWI-SNF complex protein p270)
            (B120) (SWI-like pr
          Length = 2285

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +3

Query: 3    NHTARLQAQGAARPFLPSFHPPA--YSLDPSISNQNLQSASPHPTPPRIKSATEKSRNKL 176
            +H  R    G + P  P   PP   Y   PS+ N   Q +SP P P  +++ T  S++  
Sbjct: 1547 SHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPF 1606

Query: 177  ---GEKSQRKNP 203
               G K Q+  P
Sbjct: 1607 LHSGMKMQKAGP 1618

>SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 206 PAAQLP-MAGNSNPSPSAG--GDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 373
           PA Q P +   SNP P A   G  PTP LPP   +A  AA ++P + +Y    +A KD+
Sbjct: 59  PATQPPPLLPPSNPGPDATVVGSAPTPLLPP---SATAAAKMEPEN-KYLPELMAEKDS 113

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-2)
          Length = 1558

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +3

Query: 6   HTARLQAQGAARPFLPSFHPPAYSLDPSISNQNLQSASPHPTP 134
           HT   QA     P LPS HPP   L P  +  +  SA PHP P
Sbjct: 797 HTHIQQAPTLHPPRLPSPHPP---LQPMTAPPSQSSAQPHPQP 836

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 371 ASSHHRRIA--IAVDLSDESAFAVRWAVQNYLRPGDAVVLLHV 493
           ASS  R     + +DLS ES  A  WAV   LR GD ++++ V
Sbjct: 424 ASSSKRNCTYFLTLDLSSESLHAAEWAVGILLRNGDTLIIVDV 466

>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 27.3 bits (59), Expect(2) = 1.6
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +2

Query: 173 TRREESAQKP*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 337
           +++E     P  A  LP      P+P   GD+P P  PP     G      P  P
Sbjct: 553 SQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPP 607



 Score = 22.7 bits (47), Expect(2) = 1.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 33  AARPFLPSFHPPAYSLD-PSISNQNLQSASPHPTPP 137
           AA P       P  S D PS +    ++ASP P PP
Sbjct: 507 AATPSGDDAQAPRVSTDSPSTAESIPEAASPPPPPP 542

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-1-related protein)
          Length = 1559

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = +3

Query: 6   HTARLQAQGAARPFLPSFHPPAYSLDPSISNQNLQSASPHPTP 134
           HT   Q      P LPS HPP   L P  +  +  SA PHP P
Sbjct: 796 HTLIQQTPTLHPPRLPSPHPP---LQPMTAPPSQNSAQPHPQP 835

>POP1_HUMAN (Q99575) Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5)|
           (hPOP1)
          Length = 1024

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 114 ASPHPTPPRIKSATEKSRNKLGEKSQRKNPSQ 209
           A P PTP + KS TE    K+G+K +RK+  +
Sbjct: 360 ADPLPTPSQEKSQTELPDEKIGKKRKRKDDGE 391

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +2

Query: 179 REESAQKP*PAAQLPMAGNSNPSPSAGGDVPTP-ALPPVRLAAGQAATIQPSSPR 340
           RE  A +P P    P      P P  G   P P A P  R AA Q    +P  PR
Sbjct: 191 RERPAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGP-RPGGPR 244

>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = +2

Query: 206 PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPS-----SPRYFFSSLAGKD 370
           P + +P     +P PS     PTP+ PP  +      +  PS      P Y+ S++   +
Sbjct: 94  PPSPIPPTPTPSPPPSPIPPTPTPSPPPSPIPPTPTPSPPPSPSPLGEPMYYPSNIDTNE 153

Query: 371 ASSHHRRIAIAVDLSDESAFAVRW 442
           A  +  R   A D +  + +AV W
Sbjct: 154 ALINFLRPLCATDRT-RATYAVPW 176

>SECD_MYCTU (Q50634) Protein-export membrane protein secD|
          Length = 573

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +3

Query: 30  GAARPFLPSFHPPAYSLDPSISNQNLQSASPHPTPPRIKSATEKSRNKLGEKSQRKNPSQ 209
           GA     P   P  Y  DP+ S      ASP P PP    AT+  ++     +Q K   Q
Sbjct: 157 GAPASPQPGAQPRPYPQDPAPSPNPTSPASPPPAPPAEAPATDPRKDLAERIAQEKKLRQ 216

>GBF1_HUMAN (Q92538) Golgi-specific brefeldin A-resistance guanine nucleotide|
            exchange factor 1 (BFA-resistant GEF 1)
          Length = 1859

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +2

Query: 206  PAAQLPMAGNSNPSPSAGGDVPTPALPP---VRLAAGQAATIQPSSPRYFFSSLAGKDAS 376
            P  Q P+A  S    SA GD  TP  PP   +    G     +P SPR   SS  G   +
Sbjct: 1730 PQGQKPLA--SAHLTSAAGDTRTPGHPPPPEIPSELGACDFEKPESPRAASSSSPGSPVA 1787

Query: 377  SHHRRIAIAVD 409
            S   R++   D
Sbjct: 1788 SSPSRLSPTPD 1798

>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag|
           polyprotein) [Contains: Matrix protein; Capsid protein]
          Length = 469

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 182 EESAQKP*PAA-QLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 337
           E  A  P PAA   P  G+S P+P+A    P P  PP   A   A+ + P SP
Sbjct: 126 EALALPPLPAALPPPYPGSSGPTPTA---PPLPPTPPSSPANPPASALPPPSP 175

>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 464

 Score = 25.4 bits (54), Expect(2) = 4.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 42  PFLPSFHPPAYSLDPSISNQNLQSASPHPTPPRI 143
           P  P  HPPA  + P  S  +  +   HP  P +
Sbjct: 310 PPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGV 343



 Score = 23.1 bits (48), Expect(2) = 4.7
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 200 P*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 337
           P P    P  G   P+P      P    PP      QA  + P++P
Sbjct: 339 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP 384

>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = +2

Query: 158 EIPE*TRREESAQKP*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 337
           EIP   +R  S   P P   LP  G S P P    + P    PPVR   G++  + P  P
Sbjct: 314 EIPRLPQRNLSLTSPTPP--LPSPGRSGPLPPPPTERPP---PPVRDPPGRSGPLPPPPP 368

>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +2

Query: 188 SAQKP*PAAQLPMAGNSNPSPSA--GGDVPTPALPP-VRLAAGQAATIQPSSPRYFFSSL 358
           S  +P PA      G + P P    GG +P P LP  V  A G A   Q  + RY   S+
Sbjct: 793 STGRPAPAIPNRPGGGAPPLPGGRPGGSLPPPMLPSRVSGAVGGAIVQQSGANRYVPESM 852

Query: 359 AGK 367
            G+
Sbjct: 853 RGQ 855

>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -1

Query: 372 ASLPASEEKK*RGEEGWIVAACPAARRTGGSAGVGTSPPADGEGLELPAMGSW 214
           A+ PA+ ++   GE G  V   P++   G   G   +PPAD   L LP  G+W
Sbjct: 230 AAAPAASDQTLDGEHGRDVEPPPSSGTVGAVRGPARAPPAD---LPLPG-GAW 278

>PHOSP_PI3B (P06163) Phosphoprotein (Protein P)|
          Length = 596

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1

Query: 546 TETGMEPQSAP*RTEVGRTWRSTTASPGRR*FCTAQRTAKADSSERSTAMAMRRWWEEA 370
           +E+G   +S    +++  + +S T  PGR    +  +T K D  ER       R+ E A
Sbjct: 300 SESGSRTESTSQNSQIPTSGKSNTVGPGRTTLESRIKTQKTDGKEREDTEESTRFTERA 358

>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 173 TRREESAQKP*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAA--GQAATIQPSSP 337
           T +    + P PAA+ P      P P++     TPA+PP   AA    AA+  PS P
Sbjct: 83  TGQNPPQETPPPAAESPAPSVPTPPPTS-----TPAVPPADAAAPPAVAASTPPSPP 134

>YCX1_CHLRE (P05723) Hypothetical 12.2 kDa protein in 16S rRNA region|
          Length = 111

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +2

Query: 239 NPSPSA--GGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRIAIAVDL 412
           NP P A   G +P P +PPV        T  PS PR  F+S A K   S  ++      +
Sbjct: 48  NPIPLAVMRGGIPLPGMPPV-------PTATPSLPRSGFTSSAKKIKESRKQKSTALQAV 100

Query: 413 SDE 421
            D+
Sbjct: 101 KDQ 103

>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein 1) (Fragment)
          Length = 401

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 18  LQAQGAARPFLPSFHPPAYSLDPSISNQNLQSASPHPTPP 137
           LQ   A  P  PS  PPAY   P+  +    + +P   PP
Sbjct: 242 LQQSIAREPSAPSIPPPAYQSSPAGGHATAPTPAPRTMPP 281

>ITSN1_HUMAN (Q15811) Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)|
          Length = 1721

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +2

Query: 188 SAQKP*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQP 328
           +A  P P   +P+ G S   P+    VPT A+PP  LA G    IQP
Sbjct: 127 TAVAPVPMGSIPVVGMS---PTLVSSVPTAAVPP--LANGAPPVIQP 168

>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 212 AQLPMAGNSNPS-PSAGGDVPT-PALPPVRLAAGQAATIQPSSP 337
           + LP +   NP  PS G D+ + PAL   R +AG  A   P+SP
Sbjct: 419 SSLPQSPPENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSP 462

>ROBO3_MOUSE (Q9Z2I4) Roundabout homolog 3 precursor (Retinoblastoma-inhibiting|
            gene 1) (Rig-1)
          Length = 1366

 Score = 25.4 bits (54), Expect(2) = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = +2

Query: 260  GDVPTPALPPV----RLAAGQAATIQPSSPR 340
            GD+P P LPP     +LA G A + Q   PR
Sbjct: 1265 GDLPPPPLPPPELRDKLALGSAGSRQHVFPR 1295



 Score = 22.3 bits (46), Expect(2) = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 114  ASPHPTPPRIKSATEKSRNKLGE 182
            ASP P P    SA  ++R   GE
Sbjct: 1215 ASPSPVPSTASSAPGRTRQVTGE 1237

>ERF2_SCHPO (O74718) Eukaryotic peptide chain release factor GTP-binding|
           subunit (ERF2) (Translation release factor 3)
           (Polypeptide release factor 3) (ERF3) (ERF-3)
          Length = 662

 Score = 26.6 bits (57), Expect(2) = 7.5
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
 Frame = +3

Query: 36  ARPFLPSFHPPAYSLDPSI---------SNQNLQSASPHPTPPRIKSATEKSRNKLGEKS 188
           A PF+PSF  P +    +I         + Q   S SPHPT    +   + + N + E  
Sbjct: 35  AAPFIPSFQRPGFVPVNNIAGGYPYAQYTGQGQNSNSPHPTKSYQQYYQKPTGNTVDEDK 94

Query: 189 QR 194
            R
Sbjct: 95  SR 96



 Score = 21.2 bits (43), Expect(2) = 7.5
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +2

Query: 269 PTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRIAIAVDLSDES 424
           P PA+P  ++ +    T  P S +    SL G  A +  +  A A     E+
Sbjct: 109 PKPAIPKGKVLSLGGNTSAPKSTKPISISLGGTKAPTTTKPAAPAAQSKTET 160

>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +2

Query: 224 MAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPR---YFFSSLAGKDASSHH 385
           MA  +   P+A     T ALPP   A   A  + P++ R      SS AG  A+ HH
Sbjct: 336 MAPENGVPPAAAAAAATAALPPAAAAVAAAPEVPPAASRRESLAASSTAG--ANDHH 390

>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc)
          Length = 943

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 206 PAAQLPMAGNSNPSPSAGGDVPTPA-LPPVRLAAGQAATIQPSSPRYFFSS 355
           PA  LP A ++ P+P       TP  +PP    +G  A +      YF SS
Sbjct: 54  PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGGPAGYFLSS 104

>NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) (DNedd4)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
 Frame = +2

Query: 209 AAQLPMAGNSNPSPSAGGDVPTPALPPVRLA---AGQAATIQP----SSPRYFFSSLAGK 367
           AA LP+  +S  S  AGGDVP P  PP R A   AGQ  T Q      +PR   +++   
Sbjct: 11  AAALPVPSSS--SSVAGGDVPRP--PPRRRAASVAGQQQTRQEFGNGYTPRRSLAAVNDS 66

Query: 368 DASSHHRRIAI 400
             S H R + +
Sbjct: 67  GDSCHLRIVVL 77

>POLS_WEEV (P13897) Structural polyprotein (p130) [Contains: Capsid protein|
           (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3
           protein (Spike glycoprotein E3); E2 envelope
           glycoprotein (Spike glycoprotein E2); 6K protein; E1
           envelope glycoprotein (Spike gl
          Length = 1236

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
 Frame = +3

Query: 39  RPFLPSFHPPAYSLDPSISNQNLQSASPHPTP----------PRIKSATEKSRNKLGEKS 188
           RPF P        L  SI+N   +  SP+P P          P+ K    K + +  +K+
Sbjct: 31  RPFRPPLAAQIEDLRRSIANLTFKQRSPNPPPGPPPKKKKSAPKPKPTQPKKKKQQAKKT 90

Query: 189 QRK 197
           +RK
Sbjct: 91  KRK 93

>MP2K7_HUMAN (O14733) Dual specificity mitogen-activated protein kinase kinase 7|
           (EC 2.7.12.2) (MAP kinase kinase 7) (MAPKK 7) (MAPK/ERK
           kinase 7) (JNK-activating kinase 2) (c-Jun N-terminal
           kinase kinase 2) (JNK kinase 2) (JNKK 2)
          Length = 419

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 188 SAQKP*PAAQLPMA---GNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSS 334
           S Q+P P  QLP+A   G+ +PS  +    PTP   P  +    +    P S
Sbjct: 35  SPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRS 86

>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
 Frame = +2

Query: 164  PE*TRREESAQKP*P-------AAQLPMAGNSNPSPSAGGDVPTPALPPVRLAA----GQ 310
            PE    +E+   P P       +AQ+P      P P+   D PTP+  P +LA+     +
Sbjct: 1278 PEEPEPDEAESSPDPQALWFNISAQMPCNAAPTPPPAVSEDQPTPS--PQQLASSKPMNR 1335

Query: 311  AATIQPSSPRYFFSS-LAG 364
             +   P SP  F S+ LAG
Sbjct: 1336 PSAANPCSPVQFSSTPLAG 1354

>IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2|
          Length = 346

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 359 AGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVRPT 502
           AG +A +  R   +  DLS ES +A+ + +   +  GD V ++H  P+
Sbjct: 202 AGAEAGNQ-RSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVHWEPS 248

>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 475

 Score = 25.0 bits (53), Expect(2) = 9.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 42  PFLPSFHPPAYSLDPSISNQNLQSASPHPTPPRIKSAT 155
           P  P  HPPA  + P  S  +  +   HP  P +   T
Sbjct: 272 PPAPGVHPPAPVVHPPTSGVHPPAPGVHPPAPVVHPPT 309



 Score = 22.3 bits (46), Expect(2) = 9.9
 Identities = 13/46 (28%), Positives = 16/46 (34%)
 Frame = +2

Query: 200 P*PAAQLPMAGNSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 337
           P P    P  G   P+P      P    PP      QA  + P +P
Sbjct: 350 PTPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPPAP 395


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,326,652
Number of Sequences: 219361
Number of extensions: 1037458
Number of successful extensions: 6522
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6471
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)