ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart41d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479386.1| Oryza sativa (japonica cultivar-group), mRNA 509 e-141
2dbj|AK102349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 502 e-139
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
4dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic D... 198 2e-47
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 1e-11
6gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 80 1e-11
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
8gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare str... 80 1e-11
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
10dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
11gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.53
12emb|CT025614.7| Mouse DNA sequence from clone RP23-418B18 on chr... 44 0.53
13emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4,... 42 2.1
14emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4,... 42 2.1
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
16gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete se... 42 2.1
17dbj|AK069921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
18dbj|AK061278.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
19gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 42 2.1
20ref|XM_473066.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
21gb|BT015183.1| Drosophila melanogaster SD05962 full insert cDNA 40 8.3
22gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, co... 40 8.3
23gb|AC125111.3| Mus musculus BAC clone RP24-238P2 from chromosome... 40 8.3
24emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.3
25gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.3
26emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chr... 40 8.3
27emb|AL158074.18| Human DNA sequence from clone RP11-330J23 on ch... 40 8.3
28gb|AC090419.7| Homo sapiens chromosome 17, clone CTD-2107B16, co... 40 8.3
29emb|AL021086.1|DMC86E4 Drosophila melanogaster cosmid clone 86E4 40 8.3
30gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe... 40 8.3
31gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosom... 40 8.3
32gb|AC104147.4| Drosophila melanogaster X BAC RP98-33I18 (Roswell... 40 8.3
33gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell P... 40 8.3
34ref|NM_130604.2| Drosophila melanogaster CG17766-RA (CG17766), mRNA 40 8.3
35ref|XM_696130.1| PREDICTED: Danio rerio similar to CG8202-PA (LO... 40 8.3
36gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.3
37gb|AC158669.3| Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer... 40 8.3
38emb|Z22782.1|MSCHLABA M.squamata chlorophyll a/b binding protein... 40 8.3
39emb|X69525.1|MSCABC2 M.squamata cabc2 mRNA for chlorophyll a/b/c... 40 8.3
40emb|X69524.1|MSCABC1 M.squamata cabc1 mRNA for chlorophyll a/b/c... 40 8.3
41emb|X73540.1|MSLHC13 M.squamata Lhc1*3 mRNA for chlorophyll a/b/... 40 8.3
42emb|X73539.1|MSLHC14 M.squamata Lhc1*4 mRNA for chlorophyll a/b/... 40 8.3
43gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, comple... 40 8.3
44emb|AJ293288.1|LME293288 Leishmania mexicana mexicana CRK gene f... 40 8.3
45gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 o... 40 8.3
46gb|AC005829.1|AC005829 Homo sapiens chromosome 17, clone hRPK.25... 40 8.3
47gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cance... 40 8.3
48dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.3
49gb|DQ138920.1| Drosophila melanogaster strain Ral1 CG17766 gene,... 40 8.3
50gb|AC163626.5| Mus musculus BAC clone RP23-137D2 from chromosome... 40 8.3
51gb|L15738.1|MNTCPCABBP Mantoniella squamata chloroplast photosyn... 40 8.3 
>ref|XM_479386.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1585

 Score =  509 bits (257), Expect = e-141
 Identities = 431/489 (88%)
 Strand = Plus / Plus

                                                                       
Query: 121 gggggtggaagcttcttcagagggtacacgaagctctgcaagggcctcgccgtcatactg 180
           ||||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||| ||
Sbjct: 279 gggggtggaggcttcttcagaggttacaccaagctttgcaagggcctcgctgtcatattg 338

                                                                       
Query: 181 cttctcgtgcacctcttggtccagctgttcccgtcagccatcaactatctcgcacttatc 240
           |||||||||||||| ||| ||||||| || || |||||  ||| |||||| || ||| | 
Sbjct: 339 cttctcgtgcaccttttgatccagctttttccatcagctgtcacctatcttgctcttgtt 398

                                                                       
Query: 241 ccagcaaggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaaca 300
           || | ||||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||
Sbjct: 399 cctggaaggacaatcccttttgcctggaacctgataactggtggctatgttgagctaaca 458

                                                                       
Query: 301 attccaggggtgattatcagcataattggtcttcttttattcgggaaattattagagcct 360
           ||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 459 attccaggggttattatcagcatagttggtcttcttttatttgggaaattattagaacct 518

                                                                       
Query: 361 ttatggggcacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttcaatg 420
           ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||| ||  ||
Sbjct: 519 ttatggggctcaaaggagttatcgaagttcatttttgttgtcaacttttcaacatctttg 578

                                                                       
Query: 421 tgtgtcttcataactgctattgctgtgtactatgtaacacaacaagagagctacctctac 480
           |||||||||||||||||||||||| | |||||   ||||||| |||||||||||||||| 
Sbjct: 579 tgtgtcttcataactgctattgctctatactacacaacacaagaagagagctacctctat 638

                                                                       
Query: 481 actcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaactt 540
            ||||||||||||| |||||||| |||||  | ||| |||||||||| |||||||| |||
Sbjct: 639 gctcctctttctggattttatggagttctgactggactgctggtgggtatcaagcagctt 698

                                                                       
Query: 541 atgccagatcaggagcttaatcttttcgtgctgaagattaagggaaagtggatcccatca 600
           ||| |||| |||||||| |||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 699 atgtcagaacaggagctaaatctttttgtgctgaagattaaggcaaagtggattccatca 758

                    
Query: 601 cttattgca 609
           ||| |||||
Sbjct: 759 cttgttgca 767



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 43  cggatcggcggatctcgtcgggcggcgg 70
           ||||||||||||||||||||| ||||||
Sbjct: 190 cggatcggcggatctcgtcggccggcgg 217
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>dbj|AK102349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C24, full
           insert sequence
          Length = 1586

 Score =  502 bits (253), Expect = e-139
 Identities = 430/489 (87%)
 Strand = Plus / Plus

                                                                       
Query: 121 gggggtggaagcttcttcagagggtacacgaagctctgcaagggcctcgccgtcatactg 180
           ||||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||| ||
Sbjct: 280 gggggtggaggcttcttcagaggttacaccaagctttgcaagggcctcgctgtcatattg 339

                                                                       
Query: 181 cttctcgtgcacctcttggtccagctgttcccgtcagccatcaactatctcgcacttatc 240
           |||||||||||||| ||| ||||||| || || |||||  ||| |||||| || ||| | 
Sbjct: 340 cttctcgtgcaccttttgatccagctttttccatcagctgtcacctatcttgctcttgtt 399

                                                                       
Query: 241 ccagcaaggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaaca 300
           || | ||||||||||||||| |||||| |||||||||||| ||||||||| |||| ||||
Sbjct: 400 cctggaaggacaatcccttttgcctgggacctgataactggtggctatgttgagctaaca 459

                                                                       
Query: 301 attccaggggtgattatcagcataattggtcttcttttattcgggaaattattagagcct 360
           ||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 460 attccaggggttattatcagcatagttggtcttcttttatttgggaaattattagaacct 519

                                                                       
Query: 361 ttatggggcacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttcaatg 420
           ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||| ||  ||
Sbjct: 520 ttatggggctcaaaggagttatcgaagttcatttttgttgtcaacttttcaacatctttg 579

                                                                       
Query: 421 tgtgtcttcataactgctattgctgtgtactatgtaacacaacaagagagctacctctac 480
           |||||||||||||||||||||||| | |||||   ||||||| |||||||||||||||| 
Sbjct: 580 tgtgtcttcataactgctattgctctatactacacaacacaagaagagagctacctctat 639

                                                                       
Query: 481 actcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaactt 540
            ||||||||||||| |||||||| |||||  | ||| |||||||||| |||||||| |||
Sbjct: 640 gctcctctttctggattttatggagttctgactggactgctggtgggtatcaagcagctt 699

                                                                       
Query: 541 atgccagatcaggagcttaatcttttcgtgctgaagattaagggaaagtggatcccatca 600
           ||| |||| |||||||| |||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 700 atgtcagaacaggagctaaatctttttgtgctgaagattaaggcaaagtggattccatca 759

                    
Query: 601 cttattgca 609
           ||| |||||
Sbjct: 760 cttgttgca 768



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 43  cggatcggcggatctcgtcgggcggcgg 70
           ||||||||||||||||||||| ||||||
Sbjct: 191 cggatcggcggatctcgtcggccggcgg 218
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  198 bits (100), Expect = 2e-47
 Identities = 148/164 (90%)
 Strand = Plus / Plus

                                                                            
Query: 313      attatcagcataattggtcttcttttattcgggaaattattagagcctttatggggcaca 372
                |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 27499738 attatcagcatagttggtcttcttttatttgggaaattattagaacctttatggggctca 27499797

                                                                            
Query: 373      aaggagttatcaaagttcgtttttgttgtcaacttctcaacttcaatgtgtgtcttcata 432
                ||||||||||| |||||| |||||||||||||||| ||||| ||  ||||||||||||||
Sbjct: 27499798 aaggagttatcgaagttcatttttgttgtcaacttttcaacatctttgtgtgtcttcata 27499857

                                                            
Query: 433      actgctattgctgtgtactatgtaacacaacaagagagctacct 476
                |||||||||||| | |||||   ||||||| |||||||||||||
Sbjct: 27499858 actgctattgctctatactacacaacacaagaagagagctacct 27499901



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                            
Query: 482      ctcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaactta 541
                ||||||||||||| |||||||| |||||  | ||| |||||||||| |||||||| ||||
Sbjct: 27499992 ctcctctttctggattttatggagttctgactggactgctggtgggtatcaagcagctta 27500051

                                                               
Query: 542      tgccagatcaggagcttaatcttttcgtgctgaagattaagggaaag 588
                || |||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 27500052 tgtcagaacaggagctaaatctttttgtgctgaagattaaggcaaag 27500098



 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                            
Query: 123      gggtggaagcttcttcagagggtacacgaagctctgcaagggcctcgccgtcatactgct 182
                ||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||
Sbjct: 27498089 gggtggaggcttcttcagaggttacaccaagctttgcaagggcctcgctgtcatattgct 27498148

                                        
Query: 183      tctcgtgcacctcttggtccagct 206
                |||||||||||| ||| |||||||
Sbjct: 27498149 tctcgtgcaccttttgatccagct 27498172



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                            
Query: 247      aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
                |||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 27498820 aggacaatcccttttgcctggaacctgataactggtggctatgttgagctaacaattcca 27498879

                     
Query: 307      ggggt 311
                |||||
Sbjct: 27498880 ggggt 27498884



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 43       cggatcggcggatctcgtcgggcggcgg 70
                ||||||||||||||||||||| ||||||
Sbjct: 27497507 cggatcggcggatctcgtcggccggcgg 27497534
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>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0018C07
          Length = 141707

 Score =  198 bits (100), Expect = 2e-47
 Identities = 148/164 (90%)
 Strand = Plus / Plus

                                                                         
Query: 313   attatcagcataattggtcttcttttattcgggaaattattagagcctttatggggcaca 372
             |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 63709 attatcagcatagttggtcttcttttatttgggaaattattagaacctttatggggctca 63768

                                                                         
Query: 373   aaggagttatcaaagttcgtttttgttgtcaacttctcaacttcaatgtgtgtcttcata 432
             ||||||||||| |||||| |||||||||||||||| ||||| ||  ||||||||||||||
Sbjct: 63769 aaggagttatcgaagttcatttttgttgtcaacttttcaacatctttgtgtgtcttcata 63828

                                                         
Query: 433   actgctattgctgtgtactatgtaacacaacaagagagctacct 476
             |||||||||||| | |||||   ||||||| |||||||||||||
Sbjct: 63829 actgctattgctctatactacacaacacaagaagagagctacct 63872



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                         
Query: 482   ctcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaactta 541
             ||||||||||||| |||||||| |||||  | ||| |||||||||| |||||||| ||||
Sbjct: 63963 ctcctctttctggattttatggagttctgactggactgctggtgggtatcaagcagctta 64022

                                                            
Query: 542   tgccagatcaggagcttaatcttttcgtgctgaagattaagggaaag 588
             || |||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 64023 tgtcagaacaggagctaaatctttttgtgctgaagattaaggcaaag 64069



 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 123   gggtggaagcttcttcagagggtacacgaagctctgcaagggcctcgccgtcatactgct 182
             ||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||
Sbjct: 62060 gggtggaggcttcttcagaggttacaccaagctttgcaagggcctcgctgtcatattgct 62119

                                     
Query: 183   tctcgtgcacctcttggtccagct 206
             |||||||||||| ||| |||||||
Sbjct: 62120 tctcgtgcaccttttgatccagct 62143



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                         
Query: 247   aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
             |||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 62791 aggacaatcccttttgcctggaacctgataactggtggctatgttgagctaacaattcca 62850

                  
Query: 307   ggggt 311
             |||||
Sbjct: 62851 ggggt 62855



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 43    cggatcggcggatctcgtcgggcggcgg 70
             ||||||||||||||||||||| ||||||
Sbjct: 61478 cggatcggcggatctcgtcggccggcgg 61505
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 478      tacactcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaa 537
                ||||| ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 13723719 tacacgcctctttctgggttctatggagttctttcaggatttctggtgggtatcaagcaa 13723660

                                                            
Query: 538      cttatgccagatcaggagcttaatcttttcgtgctgaagattaa 581
                 || | || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 13723659 attttacctgatcaagagattactcttttcctgctgaatattaa 13723616



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 247      aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
                ||||||||||| || || ||||||||  ||||| | |||||| | |||||||||||||||
Sbjct: 13725146 aggacaatcccatttgcttggaacctcgtaacttcaggctatattgagcaaacaattcca 13725087

                     
Query: 307      ggggt 311
                |||||
Sbjct: 13725086 ggggt 13725082



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                            
Query: 309      ggtgattatcagcataattggtcttcttttattcgggaaattattagagcctttatgggg 368
                ||||||| |||||||| ||||||||||| | || || ||| | || |||||||| |||||
Sbjct: 13724500 ggtgattgtcagcatagttggtcttcttgttttgggaaaagtgttggagcctttgtgggg 13724441

                                                                
Query: 369      cacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttc 416
                  | ||||| |||  ||||||| ||||| |||||||  ||||||||||
Sbjct: 13724440 tgctaaggaattactaaagttcatttttcttgtcaatctctcaacttc 13724393



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      gggtacacgaagctctgcaagggcctcgccgtc 174
                |||| ||| ||||| ||||||||||||||||||
Sbjct: 13725658 gggttcaccaagctgtgcaagggcctcgccgtc 13725626
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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
           OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 478 tacactcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaa 537
           ||||| ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 247 tacacgcctctttctgggttctatggagttctttcaggatttctggtgggtatcaagcaa 188

                                                       
Query: 538 cttatgccagatcaggagcttaatcttttcgtgctgaagattaa 581
            || | || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 187 attttacctgatcaagagattactcttttcctgctgaatattaa 144



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 247  aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
            ||||||||||| || || ||||||||  ||||| | |||||| | |||||||||||||||
Sbjct: 1674 aggacaatcccatttgcttggaacctcgtaacttcaggctatattgagcaaacaattcca 1615

                 
Query: 307  ggggt 311
            |||||
Sbjct: 1614 ggggt 1610



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                        
Query: 309  ggtgattatcagcataattggtcttcttttattcgggaaattattagagcctttatgggg 368
            ||||||| |||||||| ||||||||||| | || || ||| | || |||||||| |||||
Sbjct: 1028 ggtgattgtcagcatagttggtcttcttgttttgggaaaagtgttggagcctttgtgggg 969

                                                            
Query: 369  cacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttc 416
              | ||||| |||  ||||||| ||||| |||||||  ||||||||||
Sbjct: 968  tgctaaggaattactaaagttcatttttcttgtcaatctctcaacttc 921



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 142  gggtacacgaagctctgcaagggcctcgccgtc 174
            |||| ||| ||||| ||||||||||||||||||
Sbjct: 2186 gggttcaccaagctgtgcaagggcctcgccgtc 2154
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 478      tacactcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaa 537
                ||||| ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 13718694 tacacgcctctttctgggttctatggagttctttcaggatttctggtgggtatcaagcaa 13718635

                                                            
Query: 538      cttatgccagatcaggagcttaatcttttcgtgctgaagattaa 581
                 || | || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 13718634 attttacctgatcaagagattactcttttcctgctgaatattaa 13718591



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 247      aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
                ||||||||||| || || ||||||||  ||||| | |||||| | |||||||||||||||
Sbjct: 13720121 aggacaatcccatttgcttggaacctcgtaacttcaggctatattgagcaaacaattcca 13720062

                     
Query: 307      ggggt 311
                |||||
Sbjct: 13720061 ggggt 13720057



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                            
Query: 309      ggtgattatcagcataattggtcttcttttattcgggaaattattagagcctttatgggg 368
                ||||||| |||||||| ||||||||||| | || || ||| | || |||||||| |||||
Sbjct: 13719475 ggtgattgtcagcatagttggtcttcttgttttgggaaaagtgttggagcctttgtgggg 13719416

                                                                
Query: 369      cacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttc 416
                  | ||||| |||  ||||||| ||||| |||||||  ||||||||||
Sbjct: 13719415 tgctaaggaattactaaagttcatttttcttgtcaatctctcaacttc 13719368



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      gggtacacgaagctctgcaagggcctcgccgtc 174
                |||| ||| ||||| ||||||||||||||||||
Sbjct: 13720633 gggttcaccaagctgtgcaagggcctcgccgtc 13720601
to top
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0033D20, from chromosome 3, complete sequence
          Length = 128707

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                          
Query: 478    tacactcctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagcaa 537
              ||||| ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 114391 tacacgcctctttctgggttctatggagttctttcaggatttctggtgggtatcaagcaa 114332

                                                          
Query: 538    cttatgccagatcaggagcttaatcttttcgtgctgaagattaa 581
               || | || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 114331 attttacctgatcaagagattactcttttcctgctgaatattaa 114288



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 247    aggacaatccctttcgcctggaacctgataactgctggctatgtcgagcaaacaattcca 306
              ||||||||||| || || ||||||||  ||||| | |||||| | |||||||||||||||
Sbjct: 115818 aggacaatcccatttgcttggaacctcgtaacttcaggctatattgagcaaacaattcca 115759

                   
Query: 307    ggggt 311
              |||||
Sbjct: 115758 ggggt 115754



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                          
Query: 309    ggtgattatcagcataattggtcttcttttattcgggaaattattagagcctttatgggg 368
              ||||||| |||||||| ||||||||||| | || || ||| | || |||||||| |||||
Sbjct: 115172 ggtgattgtcagcatagttggtcttcttgttttgggaaaagtgttggagcctttgtgggg 115113

                                                              
Query: 369    cacaaaggagttatcaaagttcgtttttgttgtcaacttctcaacttc 416
                | ||||| |||  ||||||| ||||| |||||||  ||||||||||
Sbjct: 115112 tgctaaggaattactaaagttcatttttcttgtcaatctctcaacttc 115065



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 142    gggtacacgaagctctgcaagggcctcgccgtc 174
              |||| ||| ||||| ||||||||||||||||||
Sbjct: 116330 gggttcaccaagctgtgcaagggcctcgccgtc 116298
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                            
Query: 484      cctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagc-aacttat 542
                ||||||||||| || ||| | ||||| || ||||| |||||||||||||||| || || |
Sbjct: 19996218 cctctttctgggttctatagagttctttcgggatttctggtgggcatcaagcaaattttt 19996277

                                                       
Query: 543      gccagatcaggagcttaatcttttcgtgctgaagattaa 581
                 || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 19996278 acctgatcaagagattactcttttcctgctgaatattaa 19996316
to top
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0477F03
          Length = 176120

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                         
Query: 484   cctctttctggtttttatggcgttctctcaggattgctggtgggcatcaagc-aacttat 542
             ||||||||||| || ||| | ||||| || ||||| |||||||||||||||| || || |
Sbjct: 68069 cctctttctgggttctatagagttctttcgggatttctggtgggcatcaagcaaattttt 68128

                                                    
Query: 543   gccagatcaggagcttaatcttttcgtgctgaagattaa 581
              || ||||| ||| ||| ||||||| ||||||| |||||
Sbjct: 68129 acctgatcaagagattactcttttcctgctgaatattaa 68167
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 48     cggcggatctcgtcgggcggcg 69
              ||||||||||||||||||||||
Sbjct: 658743 cggcggatctcgtcgggcggcg 658722
to top
>emb|CT025614.7| Mouse DNA sequence from clone RP23-418B18 on chromosome 13, complete
              sequence
          Length = 183907

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3      cctctcctcactgtgtacgcac 24
              ||||||||||||||||||||||
Sbjct: 105575 cctctcctcactgtgtacgcac 105596
to top
>emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1168G10, complete
              sequence
          Length = 142295

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 505    gttctctcaggattgctggtgggcatcaagcaa 537
              ||||| || ||||| ||||||||||||||||||
Sbjct: 117864 gttctttcgggatttctggtgggcatcaagcaa 117896
to top
>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06,
             complete sequence
          Length = 147676

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 505   gttctctcaggattgctggtgggcatcaagcaa 537
             ||||| || ||||| ||||||||||||||||||
Sbjct: 51611 gttctttcgggatttctggtgggcatcaagcaa 51643
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 505     gttctctcaggattgctggtgggcatcaagcaa 537
               ||||| || ||||| ||||||||||||||||||
Sbjct: 4939202 gttctttcgggatttctggtgggcatcaagcaa 4939234



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 398      ttgtcaacttctcaacttca 417
                ||||||||||||||||||||
Sbjct: 25032607 ttgtcaacttctcaacttca 25032626
to top
>gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete sequence
          Length = 182571

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    tcagcataattggtcttcttt 337
              |||||||||||||||||||||
Sbjct: 161556 tcagcataattggtcttcttt 161576
to top
>dbj|AK069921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037C04, full
            insert sequence
          Length = 5297

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 505  gttctctcaggattgctggtgggcatcaagcaa 537
            ||||| || ||||| ||||||||||||||||||
Sbjct: 4646 gttctttcgggatttctggtgggcatcaagcaa 4678
to top
>dbj|AK061278.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F03, full
           insert sequence
          Length = 946

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 505 gttctctcaggattgctggtgggcatcaagcaa 537
           ||||| || ||||| ||||||||||||||||||
Sbjct: 399 gttctttcgggatttctggtgggcatcaagcaa 431
to top
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 317     tcagcataattggtcttcttt 337
               |||||||||||||||||||||
Sbjct: 1004642 tcagcataattggtcttcttt 1004662
to top
>ref|XM_473066.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 591

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 ttgtcaacttctcaacttca 417
           ||||||||||||||||||||
Sbjct: 248 ttgtcaacttctcaacttca 267
to top
>gb|BT015183.1| Drosophila melanogaster SD05962 full insert cDNA
          Length = 6049

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  tgctggtgggcatcaagcaa 537
            ||||||||||||||||||||
Sbjct: 1932 tgctggtgggcatcaagcaa 1951
to top
>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence
          Length = 278715

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    acgaagctctgcaagggcct 167
              ||||||||||||||||||||
Sbjct: 244499 acgaagctctgcaagggcct 244518
to top
>gb|AC125111.3| Mus musculus BAC clone RP24-238P2 from chromosome 1, complete sequence
          Length = 170703

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   aaagtggatcccatcactta 604
             ||||||||||||||||||||
Sbjct: 52680 aaagtggatcccatcactta 52661
to top
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
              complete sequence
          Length = 173171

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ttgtcaacttctcaacttca 417
              ||||||||||||||||||||
Sbjct: 153192 ttgtcaacttctcaacttca 153211
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 68      cggccgccacgatgatgagcagcg 91
               |||||||||| |||||||||||||
Sbjct: 5176338 cggccgccaccatgatgagcagcg 5176361
to top
>emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chromosome 13 Contains the
             3' end of the DIAPH3 gene for diaphanous homolog 3
             (Drosophila), complete sequence
          Length = 154212

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   cataactgctattgctgtgt 448
             ||||||||||||||||||||
Sbjct: 60362 cataactgctattgctgtgt 60343
to top
>emb|AL158074.18| Human DNA sequence from clone RP11-330J23 on chromosome 9p21.1-22.3,
             complete sequence
          Length = 133690

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 335   ttttattcgggaaattattagagccttt 362
             |||||||| ||||||||||||| |||||
Sbjct: 30949 ttttattctggaaattattagatccttt 30922
to top
>gb|AC090419.7| Homo sapiens chromosome 17, clone CTD-2107B16, complete sequence
          Length = 139585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    aattattagagcctttatgg 366
              ||||||||||||||||||||
Sbjct: 121614 aattattagagcctttatgg 121633
to top
>emb|AL021086.1|DMC86E4 Drosophila melanogaster cosmid clone 86E4
          Length = 29352

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   tgctggtgggcatcaagcaa 537
             ||||||||||||||||||||
Sbjct: 14048 tgctggtgggcatcaagcaa 14067
to top
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster
           and flanking regions
          Length = 116831

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  cggcggccgccacgatgatg 84
           ||||||||||||||||||||
Sbjct: 450 cggcggccgccacgatgatg 469
to top
>gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosome 17, complete sequence
          Length = 202092

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    tgctgaagattaagggaaag 588
              ||||||||||||||||||||
Sbjct: 117934 tgctgaagattaagggaaag 117953
to top
>gb|AC104147.4| Drosophila melanogaster X BAC RP98-33I18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170490

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    tgctggtgggcatcaagcaa 537
              ||||||||||||||||||||
Sbjct: 104296 tgctggtgggcatcaagcaa 104315
to top
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169618

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   tgctggtgggcatcaagcaa 537
             ||||||||||||||||||||
Sbjct: 19609 tgctggtgggcatcaagcaa 19628
to top
>ref|NM_130604.2| Drosophila melanogaster CG17766-RA (CG17766), mRNA
          Length = 5908

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  tgctggtgggcatcaagcaa 537
            ||||||||||||||||||||
Sbjct: 1962 tgctggtgggcatcaagcaa 1981
to top
>ref|XM_696130.1| PREDICTED: Danio rerio similar to CG8202-PA (LOC572417), mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 463 caagagagctacctctacac 482
           ||||||||||||||||||||
Sbjct: 937 caagagagctacctctacac 956
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 29      gccacagcgcgctccggatcggcg 52
               ||||| ||||||||||||||||||
Sbjct: 2295495 gccaccgcgcgctccggatcggcg 2295518
to top
>gb|AC158669.3| Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 242779

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    tgataactgctggctatgtc 291
              ||||||||||||||||||||
Sbjct: 139859 tgataactgctggctatgtc 139840
to top
>emb|Z22782.1|MSCHLABA M.squamata chlorophyll a/b binding protein mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 354 ccggcgccgtcgctcccctc 373
to top
>emb|X69525.1|MSCABC2 M.squamata cabc2 mRNA for chlorophyll a/b/c binding protein
           precursor
          Length = 876

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 372 ccggcgccgtcgctcccctc 391
to top
>emb|X69524.1|MSCABC1 M.squamata cabc1 mRNA for chlorophyll a/b/c binding protein
           precursor
          Length = 882

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 384 ccggcgccgtcgctcccctc 403
to top
>emb|X73540.1|MSLHC13 M.squamata Lhc1*3 mRNA for chlorophyll a/b/c binding precursor
          Length = 829

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 303 ccggcgccgtcgctcccctc 322
to top
>emb|X73539.1|MSLHC14 M.squamata Lhc1*4 mRNA for chlorophyll a/b/c binding precursor
          Length = 903

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 341 ccggcgccgtcgctcccctc 360
to top
>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence
          Length = 214433

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    tgctgaagattaagggaaag 588
              ||||||||||||||||||||
Sbjct: 185410 tgctgaagattaagggaaag 185391
to top
>emb|AJ293288.1|LME293288 Leishmania mexicana mexicana CRK gene for putative cyclin-dependent
           kinase
          Length = 1410

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 67  gcggccgccacgatgatgagcagc 90
           ||||||||||||| ||||||||||
Sbjct: 827 gcggccgccacgaggatgagcagc 850
to top
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete
              sequence
          Length = 300933

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    tgctggtgggcatcaagcaa 537
              ||||||||||||||||||||
Sbjct: 146586 tgctggtgggcatcaagcaa 146605
to top
>gb|AC005829.1|AC005829 Homo sapiens chromosome 17, clone hRPK.259_G_18, complete sequence
          Length = 170030

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    aattattagagcctttatgg 366
              ||||||||||||||||||||
Sbjct: 110334 aattattagagcctttatgg 110353
to top
>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190211

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    tgataactgctggctatgtc 291
              ||||||||||||||||||||
Sbjct: 147992 tgataactgctggctatgtc 148011
to top
>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete
             sequence
          Length = 179358

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   ttcaatgtgtgtcttcataa 433
             ||||||||||||||||||||
Sbjct: 73308 ttcaatgtgtgtcttcataa 73289
to top
>gb|DQ138920.1| Drosophila melanogaster strain Ral1 CG17766 gene, partial cds
          Length = 4515

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  tgctggtgggcatcaagcaa 537
            ||||||||||||||||||||
Sbjct: 1292 tgctggtgggcatcaagcaa 1311
to top
>gb|AC163626.5| Mus musculus BAC clone RP23-137D2 from chromosome 1, complete sequence
          Length = 219189

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 585    aaagtggatcccatcactta 604
              ||||||||||||||||||||
Sbjct: 138314 aaagtggatcccatcactta 138295
to top
>gb|L15738.1|MNTCPCABBP Mantoniella squamata chloroplast photosynthetic light-harvesting
           protein mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 ccggcgccgtcgctcccctc 119
           ||||||||||||||||||||
Sbjct: 354 ccggcgccgtcgctcccctc 373


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,968,209
Number of Sequences: 3902068
Number of extensions: 4968209
Number of successful extensions: 87626
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87110
Number of HSP's gapped (non-prelim): 516
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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