>Y112B_HAEIN (O86233) Hypothetical protein HI1126.1|
          Length = 371

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
 Frame = +2

Query: 275 MLWIFYALVKTGEGLLITINAAGCVIETVYII-------MYLV-----YAPR-KAKIFTA 415
           MLW F+ +      L+I     G +IE +++I        Y V     Y P  K KI+  
Sbjct: 6   MLWFFFCVTV----LIIGYFIYGKIIEKIFVINPKRQTPAYQVNDGVDYMPMSKTKIW-- 59

Query: 416 KIVLLLNVAGFGLIFLLTLFAFHGETRVVSLGWICVGFSVCVF 544
            ++ LLN+AG G IF   L A +G    V++ WI +G   C+F
Sbjct: 60  -LIQLLNIAGTGPIFGPILGALYGP---VAMLWIVIG---CIF 95

>GALT_RAT (P43424) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)|
           (Gal-1-P uridylyltransferase)
           (UDP-glucose--hexose-1-phosphate uridylyltransferase)
          Length = 379

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 55  LSTSYLSYFPSISSYHNGWPIHGAPLGIRLRPTGQH---HLFYEPP 183
           L T Y + F +   Y  GW  HGAP+G++   T  H   H  Y PP
Sbjct: 282 LLTKYDNLFETSFPYSMGW--HGAPMGLKTGATCDHWQLHAHYYPP 325

>YMP0_YEAST (Q03687) Hypothetical 46.9 kDa protein in PLB1-HXT2 intergenic|
           region
          Length = 405

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +2

Query: 131 WAFAFGLLGNIISFTSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFYALVKTG 310
           W     +  N+ISFT L +   T   I K K+  GF        L +++L I Y L+   
Sbjct: 46  WLTMQFIANNLISFTPLFSYGTTIISIEKCKTALGFSIDICATMLIASILRISYYLITPY 105

Query: 311 EGLLITINAAGCVIETVYIIMYLVYAPRKAK 403
           E  L+  +     I+ + +   L Y P + K
Sbjct: 106 EITLLRQSLVMIFIQLILLRTSLKYRPDEYK 136

>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9|
          Length = 736

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 143 RRMPKGAPWIGQPL*YEDIEGK*DRYEVDNKPAGKLINSGARG 15
           RR P G    G P+     EG  D Y V   P+ + +N GARG
Sbjct: 281 RRAPSGRDQYGNPM-----EGPTDSYGVQRAPSAERMNPGARG 318

>QACH_STASA (O87868) Quaternary ammonium compound-resistance protein qacH|
           (Quarternary ammonium determinant H)
          Length = 107

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +2

Query: 221 KSTEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAA-----GCVIETVYIIMYLVY 385
           KS++GF  +   +    + L  FY L KT + L + I  A     G V+ T  I+  L++
Sbjct: 21  KSSDGFSKLYPTITTIISFLICFYFLSKTMQHLPLNITYASWAGLGLVLTT--IVSVLIF 78

Query: 386 APRKAKIFTAKIVLLLNVAGFGLIFLLTLFAFH 484
             +   I    I+L++    FG++ L T  + H
Sbjct: 79  KEQINLISIISIILII----FGVVLLNTFGSSH 107

>Y225_MYCGE (P47467) Hypothetical protein MG225|
          Length = 489

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
 Frame = +2

Query: 146 GLLGNIISFTSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWI---------FYAL 298
           G+ GN+++   L+A   +FY +    ST+G      ++ALF+++ WI          Y +
Sbjct: 122 GIRGNLVNTWILIAIGFSFYVLLAFISTKGTSLNKKLIALFASVKWIVILSALIVAIYVI 181

Query: 299 VKTGEGLLITINAAG----------CVIETVYIIMYLVYA 388
            + G G     N               I TV+I  +  YA
Sbjct: 182 ARDGNGYSQNNNLESGFFGRREISFAQIATVFITFFYSYA 221

>SEM5B_HUMAN (Q9P283) Semaphorin-5B precursor|
          Length = 1093

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 216 RANPLRGSSRCPTSW-PCSARCCG 284
           +A P+RG+  C TSW PCSA C G
Sbjct: 847 QACPVRGAWSCWTSWSPCSASCGG 870

>COX1_RICPR (O54069) Probable cytochrome c oxidase subunit 1 (EC 1.9.3.1)|
           (Cytochrome c oxidase polypeptide I) (Cytochrome aa3
           subunit 1)
          Length = 534

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
 Frame = +2

Query: 131 WA---FAFGLLGN-IISFTS--LLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFY 292
           WA   F  GL  N +I FT+  ++  +PT  +IF   +T    S+ +   +  A+ +I  
Sbjct: 307 WAHHMFTVGLSYNALIYFTAGTMIIAVPTGIKIFSWIATMWGGSITFPTPMLFAIGFIIL 366

Query: 293 ALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKIFTA 415
             +    G++++ +A   V+ +T Y++ +  Y      +FTA
Sbjct: 367 FTIGGVTGIILSNSALDRVLHDTYYVVAHFHYTMSLGALFTA 408

>ARCD_LACSK (O53092) Arginine/ornithine antiporter|
          Length = 475

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/78 (23%), Positives = 39/78 (50%)
 Frame = +2

Query: 152 LGNIISFTSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITI 331
           LGN+   T L++ +  F+ IFKS+     Q++P ++ + S + W     V  G      I
Sbjct: 101 LGNVTFATILMSALGYFFPIFKSR-----QNLPSIL-VASVLSWSLTYFVNRGVEGAAAI 154

Query: 332 NAAGCVIETVYIIMYLVY 385
           N    + + + + +++++
Sbjct: 155 NTLVTICKLIPLFVFIIF 172

>BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated|
           zinc finger protein)
          Length = 474

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 43  PAGLLSTSYLSYFPSISSYHNGWPIHGAPLGIRLRPTGQHHLFYEPPRPDT 195
           PA L + +YL     + + H        PLGI LRP     +  EPPRP T
Sbjct: 109 PAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRP-----VEVEPPRPPT 154

>KCNB2_CANFA (Q95167) Potassium voltage-gated channel subfamily B member 2|
           (Voltage-gated potassium channel subunit Kv2.2)
           (Fragment)
          Length = 809

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
 Frame = +2

Query: 113 LSMEHPWAFAFGLLGNIISFTSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWI-- 286
           LS  + W F  G L N+I   ++L    T +    +KS   FQ+V  VV +F  M  +  
Sbjct: 253 LSSPNKWKFFKGPL-NVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRI 311

Query: 287 ------FYALVKTGEGLLITINAAGCVI----ETVYIIMYLVYAPRK---AKIFTA---- 415
                    L   G  L  + N  G +I      + I   LV+   K   A  FT+    
Sbjct: 312 LKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDADATKFTSIPAS 371

Query: 416 --KIVLLLNVAGFGLIFLLTLFAFHGETRVVSLGWICVGFSVCVFVAPLSII 565
                + +   G+G I+  TL          S+G +C    V V   P+ II
Sbjct: 372 FWWATITMTTVGYGDIYPKTLLG-------KSVGGLCCIAGVLVIALPIPII 416


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,890,197
Number of Sequences: 219361
Number of extensions: 1342343
Number of successful extensions: 4870
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4869
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)